Conserved Protein Domain Family
Coilin_N

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pfam15862: Coilin_N (this model, PSSM-Id:406322 is obsolete and has been replaced by 464910)
Coilin N-terminus
Statistics
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PSSM-Id: 406322
Aligned: 33 rows
Threshold Bit Score: 62.7822
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_006853014          5 VRIRVLFEGHRLlsksqkaeglkRCWLLLtpNLTT---IAHLSHHLIHTFNLQNTcphRLLLSMDGFVLPSFESSAILKD 81  Amborell...
EFN78302             10 VDLSKFFNDARR-----------ICWIFV--DLTKfqhVIHVKQHSTKIFGIREP---FHLLLNDAEYLPPMEDIRILIE 73  Jerdon's...
EGI65940             18 VDLSKFFYDARR-----------SCWIFV--DGMKiqqVNHLKQHISKLFNIAEP---FHLLLNDTEYLPPIEDVRILKE 81  Panamani...
EFN69673             17 IDLSKFFHDARQ-----------FCWIFV--DGTKiqqIIHIQHHISKLFSITEP---FHLLLNDTEYLPPTEDVRILRE 80  Florida ...
XP_002074852          8 LDLSNFFTDERK-----------CSLILL--D-VSwknIKNLQDHIQNLFHLN-G---ISLLTGDGSYLPPKESIEVLRN 69  Drosophi...
WGS:AANI:GJ20226-PB   8 VDLSNFFSDARS-----------CSLVLV--DV-TwenVKELQDHIQKLFYLK-D---ISLLTHDGCYVPPKESIKVIKS 69  Drosophi...
XP_002005079          8 LDLSNFFCDERR-----------CSLVLV--D-VSwenVKDLQDHIQKLFNLK-N---ISLLTSEGCYVPPKESIKVIKS 69  Drosophi...
A1Z7A8                8 VDLSNFFKDERR-----------NSLVFI--D-AAwnnIKDLQDHIQNLFSLK-D---ISLLTSDGCYLPPRESIKVLNS 69  fruit fly
XP_001961028          8 LDLSNFFSDQRS-----------QALVLI--K-SEwnnIKDVQDHIQSLFELK-G---ISLLTEDGCFLPARESIEVLRV 69  Drosophi...
XP_001861982          6 LDLSALFSDHRA-----------KTFVR---RRSQwtrIRCLQDHVRVMFQIEPE---CYLTNEADVFFPEAEDLDVIQE 68  southern...
XP_006853014         82 KDIIRVsrtletstkeigmgcdkdlvkgseimqkLPVSAVKLPAMEEfeKETRGY-QSEsedppedtMRPKKSSSKDGTS 160 Amborell...
EFN78302             74 NETIKV----------------------------IPGSGIQNEVLNAvvTVPDTN-NNKnfsktkayNNISHNKVVETTD 124 Jerdon's...
EGI65940             82 NETILV----------------------------VPGSGISNEALAVveTNHVSIlDKQalhtatniKTGKQEIVAQNTF 133 Panamani...
EFN69673             81 NETIQV----------------------------IPGSGIKIEVDKAetTCNGSM-HDKkmhtktgiDVSDMLDVSNNVS 131 Florida ...
XP_002074852         70 ADCLKA----------------------------FQFQIPIEDHT--------IV-EMAststrkstKRRKNHS---SDL 109 Drosophi...
WGS:AANI:GJ20226-PB  70 AQSLKA----------------------------FQLDVSSKGSR--------DG-VEDpscfaetsKKRKNRS-VESEK 111 Drosophi...
XP_002005079         70 TESLKA----------------------------FQLDPTGNSNE-------------ElshptetsKKRKNRS-VETEN 107 Drosophi...
A1Z7A8               70 AEGLKA----------------------------FRFASHDSDTF-------------VspapvkssKKRKNRS-VEEQV 107 fruit fly
XP_001961028         70 AKGLKA----------------------------FRFEVVDEDSF------------LApapvsktsKKRKNRS--GEGE 107 Drosophi...
XP_001861982         69 GDLIRV-------------------------------------------RASNSC-GTQqksalkkvSIDEARAQNGKRK 104 southern...
XP_006853014        161 LKKRKRADKLQNSKKKKR 178 Amborella trichopoda
EFN78302            125 ATTEKIEINTSNGLDVSE 142 Jerdon's jumping ant
EGI65940            134 NDTLNNTQPASINNTTKD 151 Panamanian leafcutter ant
EFN69673            132 SDMQPTSINNVTEnmtfy 149 Florida carpenter ant
XP_002074852        110 ELASSTPNNA-KRSRNql 126 Drosophila willistoni
WGS:AANI:GJ20226-PB 112 ELISSTPNLP-KRSKCKN 128 Drosophila virilis
XP_002005079        108 ELISSTPNLP-KRSKCKs 124 Drosophila mojavensis
A1Z7A8              108 HLTASTPLRPSKRSKNQN 125 fruit fly
XP_001961028        108 VSSHSTPCRPLKRSKSKi 125 Drosophila ananassae
XP_001861982        105 HASTSSSGDDSSSDSDDD 122 southern house mosquito
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