Conserved Protein Domain Family
PT_UbiA_Cox10

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cd13957: PT_UbiA_Cox10 
Protoheme IX farnesyltransferase
Protoheme IX farnesyltransferase (also called heme O synthase, heme A:farnesyltransferase, cytochrome c oxidase subunit X [Cox10]) converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of the heme B porphyrin ring with a hydroxyethyl farnesyl side group. It is localized at the mitochondrial inner membrane. Eukaryotic Cox10 is important for the maturation of the heme A prosthetic group of cytochrome c oxidase (COX), the terminal component of the mitochondrial respiratory chain, that catalyzes the electron transfer from reduced cytochrome c to oxygen. Prenyltransferases (PTs) catalyze the regioselective transfer of prenyl moieties onto a wide variety of substrates and play an important role in many biosynthetic pathways.
Statistics
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PSSM-Id: 260120
Aligned: 261 rows
Threshold Bit Score: 145.66
Created: 26-Feb-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative active
Feature 1: putative active site [active site], 3 residue positions
Conserved feature residue pattern:[eD] D DClick to see conserved feature residue pattern help
Evidence:
  • Comment:based on homology modeling using structures of trans prenyltransferases that are helical enzymes containing two D-rich motifs in the active site

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                               #   #                    
YP_004721123  19 IQLMKPGIVvwLMITAFSAMVVAAhgippi-stmvwtLMGLGLSAGGAHaVNMWYDRDIDrIMKRTQNRPVVTGKISPeq 97  Sulfobacillus a...
EAR61362      20 LALCKPKVVlvMLITAAVGMLLAVegappl-dkvfygLVGIALASGSAAaINHVMDRKIDeRMARTKGRPLPQGKLSPqq 98  Neptuniibacter ...
EAQ64486      20 YNLCKARVVavLLLTAVVGMFLATpevpnl-ilvvtaTIGIGLCASSAAaFNHVLDRRFDaIMYRTRNRPLPSGKVGTqq 98  Marinomonas sp....
EEF79745      19 LALCKPKVVllMLITALVGAFIATpgwpni-gqlliaVIGIGACAASGAtINNMIDHQLDaKMARTRHRATASGIVSPvq 97  Methylophaga th...
CBV42394      20 VTLGKPRVVavMLVCSLVGMLLARpvppfd--klvlgLVGIGLAASGAAaFNHVVDRRLDaMMLRTASRPLATRRLSIpl 97  Halomonas elong...
ACD03844      43 YALTKPRVValILFTAIVGMLLATpgiiai-gtlvfgTLGIGLGAAAAAaVNHVIDQHMDaKMSRTAWRPIATGGLGTfq 121 Thiobacillus pr...
EAW31234      18 LELCKPKVVflLLITAVVGMQLASpywvpi-stviiaTIGIGFAAASAAvINHVVDAKIDaKMHRTKNRPVVQGNMNNnq 96  marine gamma pr...
ACX97211      20 VKLCKIKVVslVVFTALVAMVLAAppgnlpwatvlaaTVGIALAGASAAaLNHIADREIDtVMGRTQNRPLPMGNISRgs 99  Halothiobacillu...
EDP46086      17 LELGKWRVTglMLITVWVGMTLATstalpf-ipclftLLGIGLLIVSASaMNHLLEYRLDrLMARTERRPLPLEKISPth 95  Rickettsiella g...
EAT12376      20 FAMTKFKVVlvMLFTVLVGFLLGSdtninl-wlmtctLLGVAGCAMSGAvLNHLIDRFRDqKMQRTKRRPVASGKVSTes 98  Oceanobacter sp...
Feature 1                                                                                        
YP_004721123  98 ALAFGIAAglVSFIGLgVLVNWLTASATlagylFYIFVYTMWLKRrsaQNIVIGGAAGAFPPIVGWTAVThqlgWAPWLM 177 Sulfobacillus a...
EAR61362      99 ALTFAALIgiAGISILtILVNPLTAWLTvaalmGYAVIYTVWLKRatpQNIVIGGIAGAAPPLLGWTAVTgtiePNALLL 178 Neptuniibacter ...
EAQ64486      99 AVLFAIIIgaLGFSILyLLVNPLSAYLTlasliGYALIYTAFLKRatpQNITIGGLAGAMPPLLGWVSITgtlePNSLLL 178 Marinomonas sp....
EEF79745      98 ALAFALALavSGMLLLwFLVNPLTAWLTlfaliGYAVIYTLFLKRatpQNITIGGLAGAMPPLLGWTAVTgqvdPNALLL 177 Methylophaga th...
CBV42394      98 ALGWASLLsvMGIGLLyVGVNALTAWLTfgsliGYALIYTAFLKRatpQNIVIGGVAGAAPPLLGWTSVSdqlgPEPLLL 177 Halomonas elong...
ACD03844     122 GLTFATILalLSMWVLvEWVNVETAVLTflamiGYAVIYTGFLKRttpQNIVWGGAAGAVPPVLGWCAVSghvsYESIVL 201 Thiobacillus pr...
EAW31234      97 ALLFSAVLgiSSMFILvVFVNTLTAILSlvgliGYAVIYTIFLKHatpQNIVIGGLAGALPPLIGWAAVTntisHEGILL 176 marine gamma pr...
ACX97211     100 ATVFALSLasLALVIIwTLVNPLTAVLTlltliGYAVIYTRYLKWigpQNIVLGGASGAAPAMLGWCAITgqigWEAFAL 179 Halothiobacillu...
EDP46086      96 VLLFSLTTgfVGLIILsVSSNVLTCLLSflsliAYAFIYTLYLKRhtaQNIVIGGLAGATPPLLGWTAVTgnidSEGLLL 175 Rickettsiella g...
EAT12376      99 AFAFSMLLltAGAGLLfWQVNALTAWLSiasmfAYGVIYSLWLKPatpQNITVGGLAGAMPPLLGHAAIAghvaPEALLW 178 Oceanobacter sp...
Feature 1                             #                                                          
YP_004721123 178 FLLIFLWTPPHFWSLALYKQDDYRraeiPMMPIVRGPRVTKaqnVVYAVLTVLASVGLyfthtvsLIYLVsaIVLGLAFV 257 Sulfobacillus a...
EAR61362     179 VLIIFAWTPPHFWALCIARIDDYRkadvPMLPVTHGIAYTRiqiALYSLLMVVTTLFPfmtgmsgIIYLClvALINIRFM 258 Neptuniibacter ...
EAQ64486     179 VLIIFAWTPPHFWALAIHKREDYAkagiPMLPVTHGVAFTRlqiLLYTCLLMITTALPfvtamsgLIYLFgvVLLNMRFM 258 Marinomonas sp....
EEF79745     178 VLIIFAWTPPHFWALALHKKDEYAkadvPMLPVTHGDAFTRiqiALYSLLLLGCTLLPfvtgmsgLIYLTgiLILNSRQF 257 Methylophaga th...
CBV42394     178 VLIVFAWTPPHFWALAIHKREEYEraevPMLPVTHGEAFTRlqvWLYGWLTVAVTLLPfvigmsgWLYLAgvTALNVRFM 257 Halomonas elong...
ACD03844     202 FSIIFFWTPPHFWALALHYKDDYAkakiPMLPVTHGEEHTQtqiLVYTVILVLVTLLPfimghagWLYLAgaAACNVGFL 281 Thiobacillus pr...
EAW31234     177 VLIIFVWTPPHFWALAIDRIDDYKkaqvPMLPVTHGIAFTKtciFAYSLALWIVSLAPffvgmsgFLYLIsaSILGGWFS 256 marine gamma pr...
ACX97211     180 FLIIFVWTPPHFWALAIARRDEYAkagvPMMPVIRGVAYTKrsiFAYALVLIPVSYLPvtvglsgPFYLIgaTVLGGLFA 259 Halothiobacillu...
EDP46086     176 VLIIFIWTPPHFWSLAIARHTDYAksnlPMLPITHGIDFTKqqiLLYTVLLSGISLLPfsigmsgYFYLIavFLLNIGFI 255 Rickettsiella g...
EAT12376     179 VLIIFTWTPPHFWALAIYKRDDYAkadvPMMPVTHGIEFTAfqaWLYCLLLCVVSVMPvligsqgLIYLVmaTYINAKFT 258 Oceanobacter sp...
Feature 1                                          
YP_004721123 258 GYTVRlwlepdsetvwakktFFFSLMYIAGLFVV 291 Sulfobacillus acidophilus TPY
EAR61362     259 YWVYKlwsgia---eipmklFLCSINYIMLLFMI 289 Neptuniibacter caesariensis
EAQ64486     259 YFALQlfgnde---svplrmFWYSIRYIMWLFAW 289 Marinomonas sp. MED121
EEF79745     258 YLLWQlfdkknt--qapyrlFKFSILYLLWLFLL 289 Methylophaga thiooxidans DMS010
CBV42394     258 WWNGKvwrgrdp--kaplaaFWFSIRYILGVFVV 289 Halomonas elongata DSM 2581
ACD03844     282 GYAVKlkfrrkp--htairmFAFSIVYLMGIFSA 313 Thiobacillus prosperus
EAW31234     257 YYAWAlkyrpsk--giaiktFMVSVKYLFYLFSA 288 marine gamma proteobacterium HTCC2143
ACX97211     260 IRAYRlmfvdsd--rqamrlFGFSITYLTVLFAL 291 Halothiobacillus neapolitanus c2
EDP46086     256 VAVIDllkqtkt--ahaiktFHYSNFYLLMLFTC 287 Rickettsiella grylli
EAT12376     259 WLTYRmwcdpsn--trarktFRYSIVYIMWLFAA 290 Oceanobacter sp. RED65

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