3ZHA,4AU3,4AU2,3ZHA


Conserved Protein Domain Family
serpinH1_CBP1

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cd02046: serpinH1_CBP1 
serpin family H member 1, collagen-binding protein 1
Collagen-binding protein 1 (CBP1, also called heat shock protein 47/hsp47 or colligin), because of its collagen binding ability, is a chaperone specific protein for the correct folding of types I-V procollagen in the endoplasmic reticulum (ER). It is induced under stress conditions through heat shock element-heat shock factor interaction and has been shown to be essential for collagen biosynthesis. Hsp47 transiently binds to procollagen in the ER, dissociates in the cis-Golgi or ER-Golgi intermediate compartment, and is then transported back to the ER via its RDEL retention sequence. Hsp47 recognizes collagenous (Gly-Xaa-Arg) repeats on triple-helical procollagen and can prevent local unfolding and/or aggregate formation of procollagen. Hsp47 is a non-inhibitory member of the SERPIN superfamily and corresponds to clade H. In general, SERine Proteinase INhibitors (serpins) exhibit conformational polymorphism shifting from native to cleaved, latent, delta, or polymorphic forms. Many serpins, such as antitrypsin and antichymotrypsin, function as serine protease inhibitors which regulate blood coagulation cascades. Non-inhibitory serpins perform many diverse functions such as chaperoning proteins or transporting hormones. Serpins are of medical interest because mutants can cause blood clotting disorders, emphysema, cirrhosis, and dementia. A classification based on evolutionary relatedness has resulted in the assignment of serpins to 16 clades designated A-P along with some orphans.
Statistics
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PSSM-Id: 381003
Aligned: 13 rows
Threshold Bit Score: 733.62
Created: 9-Nov-2004
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 16 residues -Click on image for an interactive view with Cn3D
Feature 1:collagen binding site [polypeptide binding site]
Evidence:
  • Structure:3ZHA; Canis lupus familiaris Hsp47/SERPINH1-collagen model peptides (CMP) complex, contacts at 4A
    View structure with Cn3D
  • Comment:two Hsp47 molecules that attach in a head-to-head fashion binds to one collagen peptide trimer (triple helix)

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
3ZHA_A         2 LSPKAATLAERSAGLAFSLYQAMAKDQavENILLSPVVVASSLGLVSLGGKATTASQAKAVLSAEQLrDEEVHAGLGELL 81  dog
P50454        36 LSPKAATLAERSAGLAFSLYQAMAKDQavENILVSPVVVASSLGLVSLGGKATTASQAKAVLSAEQLrDEEVHAGLGELL 115 Homo sapiens
4AU3_A         2 LSPKAATLAERSAGLAFSLYQAXAKDQavENILLSPVVVASSLGLVSLGGKATTASQAKAVLSAEQLrDEEVHAGLGELL 81  dog
4AU2_A         2 LSPKAATLAERSAGLAFSLYQAMAKDQavENILLSPVVVASSLGLVSLGGKATTASQAKAVLSAEQLrDEEVHAGLGELL 81  dog
3ZHA_C         2 LSPKAATLAERSAGLAFSLYQAMAKDQavENILLSPVVVASSLGLVSLGGKATTASQAKAVLSAEQLrDEEVHAGLGELL 81  dog
P13731        23 LSDKATTLADRSTTLAFNLYHAMAKDKnmENILLSPVVVASSLGLVSLGGKATTASQAKAVLSADKLnDDYVHSGLSELL 102 chicken
AAH44329      37 MSQHANVLADKSAGLAFNLYQIMAKDKkvENILLSPVVVASSLGLVSMGGQASTAAQAKTVLNAEKLsDEHIHSGLAELL 116 African clawed ...
XP_006011241  23 LSEHATTLADRSSTLAFNLYHTMAKEKnmENILISPVVVASSLGLVSLAGKASTASQAKAVLSVDKLkDEHLHAGLSELL 102 coelacanth
XP_007882772  29 LSGDAVALGERSVQLALDLYHTVSGDKasDNILLSPVVVACSLGLVSLGGKGSTAAQAKSVLRMDKVpDKKLHEALAELL 108 elephant shark
P29457        35 LSSKATTLAERSTGLAFSLYQAMAKDQavENILLSPLVVASSLGLVSLGGKATTASQAKAVLSAEKLrDEEVHTGLGELV 114 Norway rat
Q2KJH6        36 LSPKAATLAERSAGLAFSLYQAMAKDQavENILLSPVVVASSLGLVSLGGKAATASQAKAVLSAEQLrDDEVHAGLGELL 115 Bos taurus
P19324        35 LSSKATTLAERSTGLAFSLYQAMAKDQavENILLSPLVVASSLGLVSLGGKATTASQAKAVLSAEKLrDEEVHTGLGELL 114 Mus musculus
BAA11829      36 LSPKAATLAERSAGLAFSLYQAMAKDQavENILVSPVVVASSLGLVSLGGKATTASQAKAVLSAEQLrDEEVHAGLGELL 115 Homo sapiens
Feature 1                                                                                        
3ZHA_A        82 RSLSNstarNVTWKLGSRLYGPSSVSFAEDFVRSSKQHYNCEHSKINFRDKRSALQSINEWAAQTTDGKLPEVTKDVERT 161 dog
P50454       116 RSLSNstarNVTWKLGSRLYGPSSVSFADDFVRSSKQHYNCEHSKINFRDKRSALQSINEWAAQTTDGKLPEVTKDVERT 195 Homo sapiens
4AU3_A        82 RSLSNstarNVTWKLGSRLYGPSSVSFAEDFVRSSKQHYNCEHSKINFRDKRSALQSINEWAAQTTDGKLPEVTKDVERT 161 dog
4AU2_A        82 RSLSNstarNVTWKLGSRLYGPSSVSFAEDFVRSSKQHYNCEHSKINFRDKRSALQSINEWAAQTTDGKLPEVTKDVERT 161 dog
3ZHA_C        82 RSLSNstarNVTWKLGSRLYGPSSVSFAEDFVRSSKQHYNCEHSKINFRDKRSALQSINEWAAQTTDGKLPEVTKDVERT 161 dog
P13731       103 NEVSNstarNVTWKIGNRLYGPASINFADDFVKNSKKHYNYEHSKINFRDKRSALKSINEWAAQTTDGKLPEVTKDVEKT 182 chicken
AAH44329     117 NEVSNstarNVTWKMGNRLYGPSSISFSDNFVKDSKKHYNYEHSKINFRDKRSTLRSINEWAAQTTDGKLPEVTSDVEKT 196 African clawed ...
XP_006011241 103 NEVSNstarNVTWKMGSRLYGPSSVTFADDFVKRSKKHYSIDHSKINFRDKRSALKSINDWAAKTTDGKLPEITKDVEKT 182 coelacanth
XP_007882772 109 QEVSNvttrNVTWRLGSRLYGPTSVSFTGDFVKRSKEHFSCDPSKLNYRDKKSALTSINKWAAQATDGKLPELTTALDKT 188 elephant shark
P29457       115 RSLSNstarNVTWKLGSRLYGPSSVSFADDFVRSSKQHYNCEHSKINFRDKRSALQSINEWASQTTDGKLPEVTKDVERT 194 Norway rat
Q2KJH6       116 RSLSNstarNVTWKLGSRLYGPSSVSFAEDFVRSSKQHYNCEHSKINFRDKRSALQSINEWAAQTTDGKLPEVTKDVERT 195 Bos taurus
P19324       115 RSLSNstarNVTWKLGSRLYGPSSVSFADDFVRSSKQHYNCEHSKINFRDKRSALQSINEWASQTTDGKLPEVTKDVERT 194 Mus musculus
BAA11829     116 RSLSNstarNVTWKLGSRLYGPSSVSFADDFVRSSKQHYNCEHSKINFRDKRRPLQSINEWAAQTTDGKLPEVTKDVERT 195 Homo sapiens
Feature 1                           #  # # #  #  #         #                                     
3ZHA_A       162 DGALLVNAMFFKPHWDEKFHHKMVDNRGFMVTRSytVGVTMMHRTGLYNYYDDEKEKLQIVEMPLAHKLSSLIILMPHHV 241 dog
P50454       196 DGALLVNAMFFKPHWDEKFHHKMVDNRGFMVTRSytVGVMMMHRTGLYNYYDDEKEKLQIVEMPLAHKLSSLIILMPHHV 275 Homo sapiens
4AU3_A       162 DGALLVNAXFFKPHWDEKFHHKXVDNRGFXVTRSytVGVTXXHRTGLYNYYDDEKEKLQIVEXPLAHKLSSLIILXPHHV 241 dog
4AU2_A       162 DGALLVNAMFFKPHWDEKFHHKMVDNRGFMVTRSytVGVTMMHRTGLYNYYDDEKEKLQIVEMPLAHKLSSLIILMPHHV 241 dog
3ZHA_C       162 DGALLVNAMFFKPHWDEKFHHKMVDNRGFMVTRSytVGVTMMHRTGLYNYYDDEKEKLQIVEMPLAHKLSSLIILMPHHV 241 dog
P13731       183 DGALIVNAMFFKPHWDEKFHHKMVDNRGFMVTRSytVGVPMMHRTGLYNYYDDEAEKLQVVEMPLAHKLSSMIFIMPNHV 262 chicken
AAH44329     197 DGALIVNAMFFKPHWDERFHHQMVDNRGFMVTRSftVSVPMMHRTGLYKYTDDETNNLQILEMPLAHKLSSMIIIMPYHV 276 African clawed ...
XP_006011241 183 DGAMIINAMFYKPHWDEKFHEKMVDNRGFMVSRSytVAVPMMHRTGLYHFYDDEVNKLQVLEMPLAHKLSSMLFVMPYHV 262 coelacanth
XP_007882772 189 DGATIVNAMFFKPHWDEKFHHKMVDNRGFMVKPSfsVGIPMMHRTGFYNLYRDEANKVDILEMPLAHKLSSMVFIMPFGP 268 elephant shark
P29457       195 DGALLVNAMFFKPHWDEKFHHKMVDNRGFMVTRSytVGVTMMHRTGLYNYYDDEKEKLQLVEMPLAHKLSSLIILMPHHV 274 Norway rat
Q2KJH6       196 DGALLVNAMFFKPHWDERFHHKMVDNRGFMVTRSytVGVTMMHRTGLYNYYDDEKEKLQMVEMPLAHKLSSLIIIMPHHV 275 Bos taurus
P19324       195 DGALLVNAMFFKPHWDEKFHHKMVDNRGFMVTRSytVGVTMMHRTGLYNYYDDEKEKLQMVEMPLAHKLSSLIILMPHHV 274 Mus musculus
BAA11829     196 DGALLVNAMFFKPHWDEKFHHKMVDNRGFMVTRSytVGVMMMHRTGLYNYYDDEKEKLQIVEMPLAHKLSSLIILMPHHV 275 Homo sapiens
Feature 1                                   # #                                                  
3ZHA_A       242 EPLERLEKLLTKEQLKIWMGKMQKKAVAISLPKGVVEVTHDLQKHLAGLGLTEAIDKNKADLSRMsgkkdlyLASVFHAT 321 dog
P50454       276 EPLERLEKLLTKEQLKIWMGKMQKKAVAISLPKGVVEVTHDLQKHLAGLGLTEAIDKNKADLSRMsgkkdlyLASVFHAT 355 Homo sapiens
4AU3_A       242 EPLERLEKLLTKEQLKIWXGKXQKKAVAISLPKGVVEVTHDLQKHLAGLGLTEAIDKNKADLSRXsgkkdlyLASVFHAT 321 dog
4AU2_A       242 EPLERLEKLLTKEQLKIWMGKMQKKAVAISLPKGVVEVTHDLQKHLAGLGLTEAIDKNKADLSRMsgkkdlyLASVFHAT 321 dog
3ZHA_C       242 EPLERLEKLLTKEQLKIWMGKMQKKAVAISLPKGVVEVTHDLQKHLAGLGLTEAIDKNKADLSRMsgkkdlyLASVFHAT 321 dog
P13731       263 EPLERVEKLLNREQLKTWASKMKKRSVAISLPKVVLEVSHDLQKHLADLGLTEAIDKTKADLSKIsgkkdlyLSNVFHAA 342 chicken
AAH44329     277 EPLERLEKLLTREQVNAWDGKMKKRAVAVSLPKVSLEVSHDLQKHLGDLGLTEAIDKSKADLSKIsgkkdlyLASMFHAA 356 African clawed ...
XP_006011241 263 EQLDRLEKLLTREQVNTWSSKLQQVAVAVSLPKVSMEVSHELQKYLATLGLTEAVDKAKADLSTIsgkkdlyLANVFHAA 342 coelacanth
XP_007882772 269 EPLDRLEKLLTKEQVNTWMRKVKKLPVAISLPRVSLEVSHHLEKHLANIGLTEAVDKSKADLSKMsgkkdlyLANVVHGT 348 elephant shark
P29457       275 EPLERLEKLLTKEQLKTWMGKMQKKAVAISLPKGVVEVTHDLQKHLAGLGLTEAIDKNKADLSRMsgkkdlyLASVFHAT 354 Norway rat
Q2KJH6       276 EPLERLEKLLTKEQLKVWMGKMQKKAVAISLPKGVVEVTHDLQKHLAGLGLTEAIDKNKADLSRMsgkkdlyLASVFHAT 355 Bos taurus
P19324       275 EPLERLEKLLTKEQLKAWMGKMQKKAVAISLPKGVVEVTHDLQKHLAGLGLTEAIDKNKADLSRMsgkkdlyLASVFHAT 354 Mus musculus
BAA11829     276 EPLERLEKLLTKEQLKIWMGKMQKKAVAISLPKGVVEVTHDLQKHLAGLGLTEAIDKNKADLSRMsgkkdlyLASVFHAT 355 Homo sapiens
Feature 1                    #  #       # # # ##                               
3ZHA_A       322 AFEWDteGNPFDQDIYGREELRSPKLFYADHPFIFLVRDTQSGSLLFIGRLVRPKGDKMRDE 383 dog
P50454       356 AFELDtdGNPFDQDIYGREELRSPKLFYADHPFIFLVRDTQSGSLLFIGRLVRPKGDKMRDE 417 Homo sapiens
4AU3_A       322 AFEWDteGNPFDQDIYGREELRSPKLFYADHPFIFLVRDTQSGSLLFIGRLVRPKGDKXRDE 383 dog
4AU2_A       322 AFEWDteGNPFDQDIYGREELRSPKLFYADHPFIFLVRDTQSGSLLFIGRLVRPKGDKMRDE 383 dog
3ZHA_C       322 AFEWDteGNPFDQDIYGREELRSPKLFYADHPFIFLVRDTQSGSLLFIGRLVRPKGDKMRDE 383 dog
P13731       343 ALEWDtdGNPYDADIYGREEMRNPKLFYADHPFIFMIKDSKTNSILFIGRLVRPKGDKMRDE 404 chicken
AAH44329     357 ALEWDteGNPFDSDLYSREELRSPKLFYADHPFVFLIKDNKTDSILFIGRLVRPKGDKMRDE 418 African clawed frog
XP_006011241 343 ALEWDteGNPFDSSIYSREEMRNPKLFYVDHPFVFLIKDNKTNSILFIGRLVKPKGEKMRDE 404 coelacanth
XP_007882772 349 ALELDveGNPFDATIYSREELKKPKVFYADHPFIFFVKDKKTNSILFIGRLVKPKGDKLNDE 410 elephant shark
P29457       355 AFEWDteGNPFDQDIYGREELRSPKLFYADHPFIFLVRDNQSGSLLFIGRLVRPKGDKMRDE 416 Norway rat
Q2KJH6       356 AFEWDtdGNPFDQDIYGREELRSPKLFYADHPFIFLVRDTQSGSLLFIGRLVRPKGDKMRDE 417 Bos taurus
P19324       355 AFEWDteGNPFDQDIYGREELRSPKLFYADHPFIFLVRDNQSGSLLFIGRLVRPKGDKMRDE 416 Mus musculus
BAA11829     356 AFELDtdGNPFDQDIYGREELRSPKLFYADHPFIFLVRDTQSGSLLFIGRLVRPKGDKMRDE 417 Homo sapiens

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