6NR9,6NR8


Conserved Protein Domain Family
Prefoldin_4

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cd23165: Prefoldin_4 
Click on image for an interactive view with Cn3D
prefoldin subunit 4
Prefoldin subunit 4 is one of the beta subunits of the eukaryotic prefoldin complex. Prefoldin is a hexameric molecular chaperone complex, found in both eukaryotes and archaea, that binds and stabilizes newly synthesized polypeptides allowing them to fold correctly. The complex contains two alpha and four beta subunits, the two subunits being evolutionarily related. In archaea, there is usually only one gene for each subunit while in eukaryotes there two or more paralogous genes encoding each subunit adding heterogeneity to the structure of the hexamer. The structure of the complex consists of a double beta barrel assembly with six protruding coiled-coils.
Statistics
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PSSM-Id: 467481
Aligned: 60 rows
Threshold Bit Score: 87.6004
Created: 15-Mar-2021
Updated: 27-Apr-2023
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 16 residues -Click on image for an interactive view with Cn3D
Feature 1:prefoldin oligomer interface [polypeptide binding site]
Evidence:
  • Structure:6NR8; Homo sapiens prefoldin subunit 4 interacts with 4 other subunits within the prefoldin hexameric complex, contacts at 4A
    View structure with Cn3D
  • Comment:forms a hexamer composed of two alpha and four beta subunits

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                             ##   #    # ##########     #   #           
6NR9_4         1 DQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADddCLMIPYQIGDVFISHSQEETQEMLEEAKKNLQEEI 80  human
6NR8_4         1 DQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADddCLMIPYQIGDVFISHSQEETQEMLEEAKKNLQEEI 80  Homo sapiens
XP_023469781   8 DQERINEFSKYNAKIDDLEEEYEKLKKEKEYLDDVAMELELADe-DEPVRYKIGDAFVHISVSEATEKIEKDSERLDLLI 86  Rhizopus micros...
XP_016609801  18 DQQNINAFSRLNMKLQNLEEAYEEKKKEKEYLDDLSSELELADe-DELIKYRIGDAFVSLPLSTCQERIEEEQSNLSDEL 96  Spizellomyces p...
P53900        18 DQQKINEFSKLIMRKDAIAQELSLQREEKEYLDDVSLEIELIDe-DEPVQYKVGDLFIFMKQSKVTAQLEKDAERLDNKI 96  Saccharomyces c...
EEQ84136      27 DQEKINRFSRLHQRETMLEEQLKAKHKDKEDLEEVSMELELADe-DEKIPYKIGDSFISLPLSEAQSLLTASTERIDEEV 105 Blastomyces der...
XP_016585694  24 DQEKINKFSRLHQRELNLEEQLKAKNKAKEELDDISTELELVDe-DDKVPYKVGDAFFQVKAAKALKMVEASSTKMEEEI 102 Sporothrix sche...
XP_716581     19 DQLKINKFSTLISKKDEQTQQLSTLKTEKEYLDDLSIELELIDd-DEKIQYKVGDCFVFLPKDQVLEKIESDADSLEEKI 97  Candida albican...
XP_018224791  20 DQCKINTFSKLNQRLQYRKGYLKEKKLEKESIEDITEELELMD--GGSFFYKIGDAFVMLPMEEVEERLEKNLSEVDKNV 97  Pneumocystis ca...
XP_018229373  19 DQCKINTFSKLNQRLQNRTRSLKDRSLEKECMEDIVAELELADe-NESLFYKVGDAFVLLPFDEVQERLEMEQSQVNEEV 97  Pneumocystis ji...
Feature 1                                
6NR9_4        81 DALESRVESIQRVLADLKVQLYAK 104 human
6NR8_4        81 DALESRVESIQRVLADLKVQLYAK 104 Homo sapiens
XP_023469781  87 EETKQNIDNIQEKMDELKKSLYAK 110 Rhizopus microsporus ATCC 52813
XP_016609801  97 GQVSSRIGDITEKMNQLKVILYKK 120 Spizellomyces punctatus DAOM BR117
P53900        97 ETLEDKQRDIDSRLDALKAILYAK 120 Saccharomyces cerevisiae S288C
EEQ84136     106 SKLEENLSDVRDELQQLKVALYAR 129 Blastomyces dermatitidis ER-3
XP_016585694 103 GSLEESLSSVREDMTRLKVDLYAR 126 Sporothrix schenckii 1099-18
XP_716581     98 NSIEELIDGFDEELKDLKAQLYDK 121 Candida albicans SC5314
XP_018224791  98 EELEKEISELDCSMEELKSDLYKK 121 Pneumocystis carinii B80
XP_018229373  98 SKLETEISELNNDMEELKKDLYKK 121 Pneumocystis jirovecii RU7

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