Conserved Protein Domain Family
uS7_Mitochondria_Mammalian

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cd14870: uS7_Mitochondria_Mammalian 
Mammalian Mitochondrial homolog of Ribosomal Protein S7
uS7, also known as Ribosomal protein (RP)S7, is an important part of the translation process which is universally present in the small subunit of prokaryotic and eukaryotic ribosomes. MRPS7 shows more homology to bacterial RPS7 than mitochondrial proteins from plants and fungi. The ribosome small subunit is one of the two subunits of ribosome organelles that use mRNA as a template for protein synthesis in a process called translation. The ribosomes present in mammalian mitochondria have more proteins and low percentage of ribosomal RNA than bacterial ribosomes. The small subunits of bacteria and eukaryotes have the same shape of head, body, platform, beak, and shoulder. RPS7 is located at the head of the small subunit. RPS7 is a primary ribosomal RNA (rRNA) binding protein that assists in rRNA folding and the binding of other proteins during small subunit assembly in all species. RPS7 is also involved in the formation of the mRNA exit channel at the interface of the large and small subunits. Some ribosomal proteins have extra ribosomal functions in cell differentiation and apoptosis.
Statistics
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PSSM-Id: 271249
Aligned: 28 rows
Threshold Bit Score: 240.222
Created: 26-Nov-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Feature 1:rRNA binding site [nucleic acid binding site]
Evidence:
  • Comment:Ribosomal protein S7 directly interacts with rRNA during the assembly of small ribosomal subunit.
  • Comment:Ribosomal protein S7 plays a critical role in controlling rRNA folding.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                ###   #####  ##         
NP_001028768  32 EPRKDAPVSDSELSPEQKELQELkt------vrPIKAALTGDTSSAFSDPLISKFINMMMYDGNKVLARGIMTQTLETIK 105 zebrafish
XP_005092429  43 SMYNPKYVEPIIDKATLEKGLDPddlr--rhrpIKAPTTDISISPLFYDPEILKFTNMMMKAGNKERVREVMRKLFENLK 120 California sea ...
ELT96472      41 SSYSSTYLEPTYRKADLDQPLDAsddr---rflPIKAAKNDEVSTSTLDPLLNKFIRQMMRKGNKQISRLVMDRTIERIK 117 Capitella sp. I...
ADD24562      31 SPWPKGFEDPFASRVEFKEAKESgdeyakkmavSIKSAPKESTVSVFRDYQMDKFSRLFMKAGRREKSIEILNDICKKIK 110 salmon louse
XP_002424747  27 SQYPSEYVNPIFTKPEMDKKLDEisfde-vkyfKIRASLSDQTCSVFYDDDKRKLINRVMKKGDKILARTLVNNAFTKIK 105 human body louse
XP_781869     27 SRYKPTYVPPVVNRQSYEDGSLPldi-----stPVKAAVGDITSAFTYDPLVHKFVNVMNKKGQKETVSKIMEKTFEIIK 101 purple urchin
EFN70851      22 SVFPSHYVEPIYRKDEQEALFRSeeamn-iahqQVKPAQITDTCSEFYDARVLKFINTIMRNGDRKLARTLVTKSFEEIK 100 Camponotus flor...
Q60R52        23 MYDPRVFREPVSNVQELRKPLDVdder---nflFLKAMKSDATPVFYRDSVIDKLIRVCTKDGEKETSRKNVLSALEIIK 99  Caenorhabditis ...
EFN77476      16 SVFPKHYIQPTFRKDEQEELLQSedgkk-igheLVKPALATDTCSDFYDPKVMKFTNVIMRNGNKLLAKKLVTYAFENVK 94  Harpegnathos sa...
ESP03782      17 RRYDPRFREPSLDTAELAEPLSDdder---kynPIKAAKNYETTSVFYDPLLEKLINMLMYNGNKAAAREIVEGMLEEIK 93  Lottia gigantea
Feature 1                                                 #        #        ##  #   #      #     
NP_001028768 106 RKQVEKYHkspaak--reeiecNPYAIFHQAMENCKPVIGLASIQKGGKFYQVPVPLTDNRRRFMAMKWMITECRTNKQG 183 zebrafish
XP_005092429 121 HMQVEKYNkatsese-kaeiecNPVVIFKQGVENCKPLLLVTRVVKGGVAYRVPVCARPNEQRFRAMKWIIESCRDKERR 199 California sea ...
ELT96472     118 QFQLEKYHketseek-rdlinlEPISIIYQAVENCKPLLTIQHARRGGVMYMVPIPVKPSYALYKSIDWIIEASTGKHRT 196 Capitella sp. I...
ADD24562     111 ETQHKKRNaasnadassseiivDPITIIHKAIDNCSPLMVTKSVPVGSVNYTVPTAIQPPKQRFYGMKWIVEAGRNRPTR 190 salmon louse
XP_002424747 106 HVQLRKYNkekdese-rekiplNPLVIYHSAIKNLTPSLYLTKIKKSGTWYQIPVGIKPNEAKFRAIQWLLQATMEKSPV 184 human body louse
XP_781869    102 SKQVEKYNrasemd--kssletSPRVIFMKAIENCKPSMGLVTIKRGGKNYQVPSPLKDNRQRFLAMKWILQECEKKPLK 179 purple urchin
EFN70851     101 RIQLQRYHkaktnee-kdnielDPFVVFHYAVDNCTPVLQLINCRKGGIMYKIPVPISPVRAQHKSMKWLIEAAKEKDDE 179 Camponotus flor...
Q60R52       100 RRQYKAWTkandee--kksielDPFVIARKGIKNCHPLMKLQGVTRGGTTYQVPFPIEEPEAEFRAMKMMRDICRVRAKH 177 Caenorhabditis ...
EFN77476      95 RIQLQRYHkatdeee-kekielDPVRVFHHALANCTPVLYLKATKKGGITYQVPVPIESSKAQHTAMKWLIEATNDKGHE 173 Harpegnathos sa...
ESP03782      94 MIQVKKYNhagskqe-qeaiecNPYLIFQQALENLKPALMIIPVRKGGTVYQVPMSCPPKRQQFKVFKWLVDLNRDRERK 172 Lottia gigantea
Feature 1            ##  #                                    
NP_001028768 184 r--tLMYEKLSQELLAAFANEGNVIKRKHDLHKMAEANRAYAHYR 226 zebrafish
XP_005092429 200 i---PMEQKLAWEIMDAYNNQGKAIRRKQEIHRICESNRAFAHLR 241 California sea hare
ELT96472     197 ntdnRVWDDMAREFIAAAKNDGGAIRKKQELHRLCEANRAYAHYR 241 Capitella sp. I Grassle & Grassle, 1976
ADD24562     191 kegeLFAHFVAREIIDASENEGRVVSKKEELHRTCYQNRAYVNYY 235 salmon louse
XP_002424747 185 i---SFEKALADEILAAHEKRGKAFNKKLELLKMCEANRSIAHYK 226 human body louse
XP_781869    180 m---HMPEKLAQEFLDAFHDQGNVVKRKHDLHRQCEANRAYAHFR 221 purple urchin
EFN70851     180 e---RFYNMLAKELVSASQNQGRAVKWKEELHKKCQANRAYAHFR 221 Camponotus floridanus
Q60R52       178 ge-tHFKDILATELLAASQNEGSTITAKQELHKTCEANRAYAHYR 221 Caenorhabditis briggsae
EFN77476     174 e---RFYDTLARVLVATAQNQGGAVRRKHELYKKCQEHRAYAHFR 215 Harpegnathos saltator
ESP03782     173 i---RMSKKLAMDVVDAFHHEGKCMKKKIELLKLCEANRAFAHYR 214 Lottia gigantea

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