Conserved Protein Domain Family
ApoA-II

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pfam04711: ApoA-II 
Apolipoprotein A-II (ApoA-II)
Apolipoprotein A-II (ApoA-II) is the second major apolipoprotein of high density lipoprotein in human plasma. Mature ApoA-II is present as a dimer of two 77-amino acid chains joined by a disulphide bridge. ApoA-II regulates many steps in HDL metabolism, and its role in coronary heart disease is unclear. In bovine serum, the ApoA-II homolog is present in almost free form. Bovine ApoA-II shows antimicrobial activity against Escherichia coli and yeasts in phosphate buffered saline (PBS).
Statistics
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PSSM-Id: 461404
Aligned: 10 rows
Threshold Bit Score: 126.424
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P09813         1 MKLLAMVALLVTICSLEGALVKRQADGPDMQSLFTQYFQSMTDYGKDLMEKAKTSEIQSQAKAYFEKTHEQLTPLVRSAG 80  house mouse
P04638         1 MKLLAMVALLVTICSLEGALVRRQAAETDVQTLFSQYLQSLTDYGKDLMEKAQPSEIQNQAKAYFQNAQERLTPFVQRTG 80  Norway rat
XP_006907920   1 MKLLAVTVLLLTICSLEGALVRRQAEESNVQGLLSQYFQTVADYGKDLVDKAKGSELQAQ--AYLEKTQEQLTPLVKKAG 78 
XP_003785901   1 MKLLAMTVLLLTIYSLEGALVRRQAEESSLQSLFSQYFQTMADYGKDLVEKVKTPELQAQAEAYFAKSKEQLTPLVKKAG 80 
ELV13288       1 MKLLAMATLLFTICTLEGALVRRQAEEPNLEGLVSQYVQTLTDYGKELVNKAKGQELLVQAKAYFEKIQERLTPLVNEVR 80 
G5BWH8         1 MKLLAMTVLLVTICSLDGALVRRQAEEPDLQGLFSQYFQTVTSYGKDLLQKTKPQDLQAQVQSYFEKTQEQLVPLVKKAG 80  naked mole-rat
XP_003466639   1 MKLLAMTVLLLTICSLEGALVRRQTEESNLQRLFSQYFQTMTSYGKDLLEKVKAQELQTQAQAYFTKTQEELVPLVKKAG 80 
E2RAK7         1 MKLLAVTVLLLVICSLEGAFVRRQAEEPNLQSLVSQYFQTVTDYGKDLMEKAKGPELQAQAKAYFEKTQEQLTPLVKKAG 80  dog
XP_004775983   1 MKLLALTLLLLAVCNLEGALVRRQAEEPDLQSLISQYSEMVATYGKNLVEKVKDPELQAQAKAYFENTQEQLMPLVQKVG 80 
XP_007485040   1 MKLLALTVLLLTICSLEGALVRREAQDQGVQSIFSQYFQKLTDIGKDLAEKVKAPEVQTQVQQYFKksqdqviplaqkal 80  gray short-tail...
P09813        81 TSLVNFFSSLMNLeEKPAPA 100 house mouse
P04638        81 TNLMDFLSRLMSPeEKPAPA 100 Norway rat
XP_006907920  79 NDLIHFFSYFTDL-KTPAPA 97 
XP_003785901  81 TDLVNFFNYFVDF-GTQSSA 99 
ELV13288      81 ADLPKFFNYFVDL--QAQPA 98 
G5BWH8        81 TELFNMLSNMIEL-KKTQPA 99  naked mole-rat
XP_003466639  81 NDLFNILSNFVDF-KKTQPP 99 
E2RAK7        81 TDLLNFLSNFMDL--KTQPA 98  dog
XP_004775983  81 VDLINFLSNFMDF--KKQPA 98 
XP_007485040  81 tdtmSFFSSLVEAgKKDASK 100 gray short-tailed opossum
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