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Accession: PRJNA717305 ID: 717305

Homalodisca vitripennis isolate:Tulare (glassy-winged sharpshooter)

Homalodisca vitripennis Tulare and endosymbionts Genome sequencing and assembly

Genome sequencing and annotation of Glassy-winged Sharpshooter collected from Tulare county representing 3 individual insects.

Accession	PRJNA717305
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Homalodisca vitripennis[Taxonomy ID: 197043] Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Auchenorrhyncha; Membracoidea; Cicadellidae; Cicadellinae; Proconiini; Homalodisca; Homalodisca vitripennis
Publications (total 4) Less...	Ettinger CL et al., "Transcriptome and population structure of glassy-winged sharpshooters (Homalodisca vitripennis) with varying insecticide resistance in southern California.", BMC Genomics, 2022 Oct 22;23(1):721 More... Ettinger CL et al., "Transcriptome and population structure of glassy-winged sharpshooters (Homalodisca vitripennis) with varying insecticide resistance in southern California.", BMC Genomics, 2022 Oct 22;23(1):721 Ettinger CL et al., "Metagenome-Assembled Genomes of Bacterial Symbionts Associated with Insecticide-Resistant and -Susceptible Individuals of the Glassy-Winged Sharpshooter (Homalodisca vitripennis).", Microbiol Resour Announc, 2022 Jul 21;11(7):e0050622 Ettinger CL et al., "Improved draft reference genome for the Glassy-winged Sharpshooter (Homalodisca vitripennis), a vector for Pierce's disease.", G3 (Bethesda), 2021 Sep 27;11(10) Byrne FJ et al., "Insecticide resistance in California populations of the glassy-winged sharpshooter Homalodisca vitripennis.", Pest Manag Sci, 2021 May;77(5):2315-2323 Less...
Grants	"GENOMIC TOOLS TO MONITOR AND EXPLOIT MICROBIAL DIVERSITY FOR AGRICULTURAL DISEASE AND ARIDLAND MANAGEMENT" (Grant ID CA-R-PPA-5062-H, United States Dept of Agriculture)
Submission	Registration date: 27-Jul-2021 University of California, Riverside
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	12062
WGS master	4
SRA Experiments	4
Protein Sequences	98284
Publications
PubMed	4
PMC	3
Other datasets
BioSample	4
Assembly	4

Assembly details:

Assembly level

Number of Assemblies

Scaffold

4
4

Assembly	Level	WGS	BioSample	Isolate	Taxonomy
GCA_022867485.1		JALIDI000000000	SAMN27114269	SUS-01	Candidatus Karelsulcia muelleri
GCA_022865205.1		JALIDJ000000000	SAMN27114270	SUS-02	Candidatus Palibaumannia cicadellinicola
GCA_019364655.1		JAGXCG000000000	SAMN18497788	Tulare	Homalodisca vitripennis
GCA_022867525.1		JALIDK000000000	SAMN27114271	SUS-03	Wolbachia endosymbiont of Homalodisca vitripennis

SRA Data Details

Parameter	Value
Data volume, Gbases	134
Data volume, Mbytes	65562

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BioProject Links for Protein (Select 2073254017) (1)
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Homalodisca vitripennis isolate:Tulare
Homalodisca vitripennis isolate:Tulare
Homalodisca vitripennis Tulare and endosymbionts Genome sequencing and assembly

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