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Links from Protein

Accession: PRJNA433689 ID: 433689

Salmonella enterica subsp. enterica

Salmonella enterica subsp. enterica Genome sequencing and assembly

See Genome Information for Salmonella enterica
Serotype diversity and Antimicrobial resistance among Salmonella enterica from patients at an equine referral hospital
AccessionPRJNA433689
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismSalmonella enterica subsp. enterica[Taxonomy ID: 59201]
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica
PublicationsLeon IM et al., "Serotype Diversity and Antimicrobial Resistance among Salmonella enterica Isolates from Patients at an Equine Referral Hospital.", Appl Environ Microbiol, 2018 Jul 1;84(13)
SubmissionRegistration date: 2-May-2018
Texas A&M University College of Veterinary Medicine and Biomedical Sciences
RelevanceVeterinary
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)29385
WGS master255
SRA Experiments260
Protein Sequences1187954
Publications
PubMed1
PMC1
Other datasets
BioSample255
Assembly255
Assembly details:
Assembly levelNumber of Assemblies
255
255
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_003078315.1ContigQDMN00000000SAMN08514426
212
GCA_003117325.1ContigQDTG00000000SAMN08514248
34
GCA_003117315.1ContigQDTH00000000SAMN08514247
33
GCA_003117295.1ContigQDTF00000000SAMN08514249
35
GCA_003117275.1ContigQDTE00000000SAMN08514250
36
GCA_003117255.1ContigQDNJ00000000SAMN08514404
190
GCA_003117405.1ContigQDTL00000000SAMN08514243
29
GCA_003117395.1ContigQDTK00000000SAMN08514244
30
GCA_003117375.1ContigQDTJ00000000SAMN08514245
31
GCA_003117335.1ContigQDTI00000000SAMN08514246
32
GCA_003117575.1ContigQDTU00000000SAMN08514234
20
GCA_003117555.1ContigQDTT00000000SAMN08514235
21
GCA_003117535.1ContigQDTS00000000SAMN08514236
22
GCA_003117515.1ContigQDTR00000000SAMN08514237
23
GCA_003117495.1ContigQDTO00000000SAMN08514240
26
GCA_003117475.1ContigQDTQ00000000SAMN08514238
24
GCA_003117455.1ContigQDTP00000000SAMN08514239
25
GCA_003117435.1ContigQDTM00000000SAMN08514242
28
GCA_003117615.1ContigQDTW00000000SAMN08514232
18
GCA_003117625.1ContigQDTX00000000SAMN08514231
17
GCA_003117635.1ContigQDTY00000000SAMN08514230
16
GCA_003117595.1ContigQDTV00000000SAMN08514233
19
GCA_003117755.1ContigQDUC00000000SAMN08514226
12
GCA_003117735.1ContigQDUB00000000SAMN08514227
13
GCA_003117695.1ContigQDUA00000000SAMN08514228
14
GCA_003117675.1ContigQDTZ00000000SAMN08514229
15
GCA_003117835.1ContigQDUG00000000SAMN08514222
8
GCA_003117815.1ContigQDUF00000000SAMN08514223
9
GCA_003117795.1ContigQDUE00000000SAMN08514224
10
GCA_003117775.1ContigQDUD00000000SAMN08514225
11
GCA_003117955.1ContigQDUJ00000000SAMN08514219
5
GCA_003117935.1ContigQDUI00000000SAMN08514220
6
GCA_003117915.1ContigQDUH00000000SAMN08514221
7
GCA_003117115.1ContigQDTN00000000SAMN08514241
27
GCA_003117235.1ContigQDNI00000000SAMN08514405
191
GCA_003117215.1ContigQDNK00000000SAMN08514403
189
GCA_003117145.1ContigQDNH00000000SAMN08514406
192
GCA_003117165.1ContigQDNG00000000SAMN08514407
193
GCA_003117105.1ContigQDNL00000000SAMN08514402
188
GCA_003117015.1ContigQDMX00000000SAMN08514416
202
GCA_003118175.1ContigQDNN00000000SAMN08514400
186
GCA_003118155.1ContigQDTD00000000SAMN08514251
37
GCA_003118135.1ContigQDTC00000000SAMN08514252
38
GCA_003117065.1ContigQDLH00000000SAMN08514458
244
GCA_003117055.1ContigQDMR00000000SAMN08514422
208
GCA_003118035.1ContigQDUN00000000SAMN08514215
1
GCA_003118015.1ContigQDUL00000000SAMN08514217
3
GCA_003117995.1ContigQDUM00000000SAMN08514216
2
GCA_003117975.1ContigQDUK00000000SAMN08514218
4
GCA_003118115.1ContigQDTB00000000SAMN08514253
39
GCA_003118095.1ContigQDUQ00000000SAMN08514367
153
GCA_003118075.1ContigQDUP00000000SAMN08514368
154
GCA_003118055.1ContigQDUO00000000SAMN08514369
155
GCA_003118235.1ContigQDNO00000000SAMN08514399
185
GCA_003118215.1ContigQDNM00000000SAMN08514401
187
GCA_003118595.1ContigQDOB00000000SAMN08514386
172
GCA_003118555.1ContigQDOA00000000SAMN08514387
173
GCA_003118535.1ContigQDNZ00000000SAMN08514388
174
GCA_003118295.1ContigQDNQ00000000SAMN08514397
183
GCA_003118275.1ContigQDNP00000000SAMN08514398
184
GCA_003118775.1ContigQDOJ00000000SAMN08514378
164
GCA_003118755.1ContigQDOI00000000SAMN08514379
165
GCA_003118725.1ContigQDOG00000000SAMN08514381
167
GCA_003118715.1ContigQDOH00000000SAMN08514380
166
GCA_003118635.1ContigQDOD00000000SAMN08514384
170
GCA_003118615.1ContigQDOC00000000SAMN08514385
171
GCA_003118695.1ContigQDOF00000000SAMN08514382
168
GCA_003118675.1ContigQDOE00000000SAMN08514383
169
GCA_003118395.1ContigQDNU00000000SAMN08514393
179
GCA_003118375.1ContigQDNT00000000SAMN08514394
180
GCA_003118355.1ContigQDNS00000000SAMN08514395
181
GCA_003118315.1ContigQDNR00000000SAMN08514396
182
GCA_003118475.1ContigQDNY00000000SAMN08514389
175
GCA_003118485.1ContigQDNW00000000SAMN08514391
177
GCA_003118455.1ContigQDNX00000000SAMN08514390
176
GCA_003118435.1ContigQDNV00000000SAMN08514392
178
GCA_003118855.1ContigQDON00000000SAMN08514374
160
GCA_003118825.1ContigQDOM00000000SAMN08514375
161
GCA_003118815.1ContigQDOL00000000SAMN08514376
162
GCA_003118795.1ContigQDOK00000000SAMN08514377
163
GCA_003118935.1ContigQDOR00000000SAMN08514370
156
GCA_003118915.1ContigQDOQ00000000SAMN08514371
157
GCA_003118895.1ContigQDOP00000000SAMN08514372
158
GCA_003118875.1ContigQDOO00000000SAMN08514373
159
GCA_003119155.1ContigQDPB00000000SAMN08514357
143
GCA_003119135.1ContigQDPA00000000SAMN08514358
144
GCA_003119095.1ContigQDOY00000000SAMN08514360
146
GCA_003119075.1ContigQDOZ00000000SAMN08514359
145
GCA_003119055.1ContigQDOX00000000SAMN08514361
147
GCA_003119035.1ContigQDOW00000000SAMN08514362
148
GCA_003119015.1ContigQDOV00000000SAMN08514363
149
GCA_003118995.1ContigQDOU00000000SAMN08514364
150
GCA_003118975.1ContigQDOT00000000SAMN08514365
151
GCA_003118955.1ContigQDOS00000000SAMN08514366
152
GCA_003119255.1ContigQDPF00000000SAMN08514353
139
GCA_003119225.1ContigQDPE00000000SAMN08514354
140
GCA_003119215.1ContigQDPD00000000SAMN08514355
141
GCA_003119175.1ContigQDPC00000000SAMN08514356
142
GCA_003119325.1ContigQDPI00000000SAMN08514350
136
GCA_003119355.1ContigQDPJ00000000SAMN08514349
135
GCA_003119315.1ContigQDPH00000000SAMN08514351
137
GCA_003119295.1ContigQDPG00000000SAMN08514352
138
GCA_003119455.1ContigQDPN00000000SAMN08514345
131
GCA_003119435.1ContigQDPM00000000SAMN08514346
132
GCA_003119415.1ContigQDPL00000000SAMN08514347
133
GCA_003119395.1ContigQDPK00000000SAMN08514348
134
GCA_003119515.1ContigQDPQ00000000SAMN08514342
128
GCA_003119495.1ContigQDPP00000000SAMN08514343
129
GCA_003119475.1ContigQDPO00000000SAMN08514344
130
GCA_003120605.1ContigQDRU00000000SAMN08514286
72
GCA_003120595.1ContigQDRT00000000SAMN08514287
73
GCA_003120575.1ContigQDRR00000000SAMN08514289
75
GCA_003120535.1ContigQDRO00000000SAMN08514292
78
GCA_003120555.1ContigQDRQ00000000SAMN08514290
76
GCA_003120515.1ContigQDRP00000000SAMN08514291
77
GCA_003120635.1ContigQDRS00000000SAMN08514288
74
GCA_003120695.1ContigQDRX00000000SAMN08514283
69
GCA_003120675.1ContigQDRW00000000SAMN08514284
70
GCA_003120655.1ContigQDRV00000000SAMN08514285
71
GCA_003120435.1ContigQDRK00000000SAMN08514296
82
GCA_003120415.1ContigQDRJ00000000SAMN08514297
83
GCA_003120395.1ContigQDRI00000000SAMN08514298
84
GCA_003120375.1ContigQDRH00000000SAMN08514299
85
GCA_003120495.1ContigQDRN00000000SAMN08514293
79
GCA_003120475.1ContigQDRL00000000SAMN08514295
81
GCA_003120455.1ContigQDRM00000000SAMN08514294
80
GCA_003120255.1ContigQDRA00000000SAMN08514306
92
GCA_003120235.1ContigQDQZ00000000SAMN08514307
93
GCA_003120215.1ContigQDRB00000000SAMN08514305
91
GCA_003120315.1ContigQDRE00000000SAMN08514302
88
GCA_003120295.1ContigQDRD00000000SAMN08514303
89
GCA_003120275.1ContigQDRC00000000SAMN08514304
90
GCA_003119935.1ContigQDQL00000000SAMN08514321
107
GCA_003119915.1ContigQDQK00000000SAMN08514322
108
GCA_003119895.1ContigQDQI00000000SAMN08514324
110
GCA_003119875.1ContigQDQJ00000000SAMN08514323
109
GCA_003119975.1ContigQDQN00000000SAMN08514319
105
GCA_003119955.1ContigQDQM00000000SAMN08514320
106
GCA_003120355.1ContigQDRG00000000SAMN08514300
86
GCA_003120335.1ContigQDRF00000000SAMN08514301
87
GCA_003120075.1ContigQDQS00000000SAMN08514314
100
GCA_003120055.1ContigQDQP00000000SAMN08514317
103
GCA_003120035.1ContigQDQR00000000SAMN08514315
101
GCA_003120015.1ContigQDQQ00000000SAMN08514316
102
GCA_003119995.1ContigQDQO00000000SAMN08514318
104
GCA_003120195.1ContigQDQY00000000SAMN08514308
94
GCA_003120155.1ContigQDQW00000000SAMN08514310
96
GCA_003120165.1ContigQDQX00000000SAMN08514309
95
GCA_003120135.1ContigQDQU00000000SAMN08514312
98
GCA_003120115.1ContigQDQV00000000SAMN08514311
97
GCA_003120095.1ContigQDQT00000000SAMN08514313
99
GCA_003119595.1ContigQDPU00000000SAMN08514338
124
GCA_003119555.1ContigQDPS00000000SAMN08514340
126
GCA_003119565.1ContigQDPT00000000SAMN08514339
125
GCA_003119535.1ContigQDPR00000000SAMN08514341
127
GCA_003119675.1ContigQDPY00000000SAMN08514334
120
GCA_003119655.1ContigQDPX00000000SAMN08514335
121
GCA_003119635.1ContigQDPW00000000SAMN08514336
122
GCA_003119615.1ContigQDPV00000000SAMN08514337
123
GCA_003119835.1ContigQDQG00000000SAMN08514326
112
GCA_003119845.1ContigQDQH00000000SAMN08514325
111
GCA_003119815.1ContigQDQE00000000SAMN08514328
114
GCA_003119795.1ContigQDQF00000000SAMN08514327
113
GCA_003119765.1ContigQDQD00000000SAMN08514329
115
GCA_003119755.1ContigQDQB00000000SAMN08514331
117
GCA_003119735.1ContigQDQA00000000SAMN08514332
118
GCA_003119715.1ContigQDQC00000000SAMN08514330
116
GCA_003119695.1ContigQDPZ00000000SAMN08514333
119
GCA_003079095.1ContigQDNC00000000SAMN08514411
197
GCA_003120755.1ContigQDSB00000000SAMN08514279
65
GCA_003120735.1ContigQDRY00000000SAMN08514282
68
GCA_003120715.1ContigQDRZ00000000SAMN08514281
67
GCA_003121275.1ContigQDTA00000000SAMN08514254
40
GCA_003121255.1ContigQDSZ00000000SAMN08514255
41
GCA_003121235.1ContigQDSY00000000SAMN08514256
42
GCA_003121215.1ContigQDSX00000000SAMN08514257
43
GCA_003121195.1ContigQDSW00000000SAMN08514258
44
GCA_003121175.1ContigQDSV00000000SAMN08514259
45
GCA_003121155.1ContigQDSU00000000SAMN08514260
46
GCA_003121115.1ContigQDSS00000000SAMN08514262
48
GCA_003121135.1ContigQDST00000000SAMN08514261
47
GCA_003121095.1ContigQDSQ00000000SAMN08514264
50
GCA_003121075.1ContigQDSP00000000SAMN08514265
51
GCA_003121055.1ContigQDSR00000000SAMN08514263
49
GCA_003121035.1ContigQDSO00000000SAMN08514266
52
GCA_003121015.1ContigQDSL00000000SAMN08514269
55
GCA_003120975.1ContigQDSM00000000SAMN08514268
54
GCA_003120995.1ContigQDSN00000000SAMN08514267
53
GCA_003120955.1ContigQDSJ00000000SAMN08514271
57
GCA_003120935.1ContigQDSK00000000SAMN08514270
56
GCA_003120915.1ContigQDSG00000000SAMN08514274
60
GCA_003120895.1ContigQDSI00000000SAMN08514272
58
GCA_003120875.1ContigQDSH00000000SAMN08514273
59
GCA_003120855.1ContigQDSF00000000SAMN08514275
61
GCA_003079395.1ContigQDNF00000000SAMN08514408
194
GCA_003079195.1ContigQDNE00000000SAMN08514409
195
GCA_003079135.1ContigQDND00000000SAMN08514410
196
GCA_003079215.1ContigQDMY00000000SAMN08514415
201
GCA_003120835.1ContigQDSE00000000SAMN08514276
62
GCA_003120815.1ContigQDSD00000000SAMN08514277
63
GCA_003120795.1ContigQDSC00000000SAMN08514278
64
GCA_003120775.1ContigQDSA00000000SAMN08514280
66
GCA_003078975.1ContigQDNA00000000SAMN08514413
199
GCA_003079035.1ContigQDNB00000000SAMN08514412
198
GCA_003078935.1ContigQDMZ00000000SAMN08514414
200
GCA_003078795.1ContigQDMW00000000SAMN08514417
203
GCA_003078755.1ContigQDMV00000000SAMN08514418
204
GCA_003078695.1ContigQDMU00000000SAMN08514419
205
GCA_003078595.1ContigQDMS00000000SAMN08514421
207
GCA_003078635.1ContigQDMT00000000SAMN08514420
206
GCA_003078535.1ContigQDMQ00000000SAMN08514423
209
GCA_003078455.1ContigQDMP00000000SAMN08514424
210
GCA_003078395.1ContigQDMO00000000SAMN08514425
211
GCA_003078335.1ContigQDMM00000000SAMN08514427
213
GCA_003078255.1ContigQDML00000000SAMN08514428
214
GCA_003078195.1ContigQDMK00000000SAMN08514429
215
GCA_003078135.1ContigQDMI00000000SAMN08514431
217
GCA_003078095.1ContigQDMH00000000SAMN08514432
218
GCA_003078015.1ContigQDMJ00000000SAMN08514430
216
GCA_003077915.1ContigQDMF00000000SAMN08514434
220
GCA_003077795.1ContigQDME00000000SAMN08514435
221
GCA_003077855.1ContigQDMG00000000SAMN08514433
219
GCA_003077735.1ContigQDMD00000000SAMN08514436
222
GCA_003077595.1ContigQDMA00000000SAMN08514439
225
GCA_003077555.1ContigQDLZ00000000SAMN08514440
226
GCA_003077515.1ContigQDMC00000000SAMN08514437
223
GCA_003077495.1ContigQDMB00000000SAMN08514438
224
GCA_003077475.1ContigQDLY00000000SAMN08514441
227
GCA_003077435.1ContigQDLW00000000SAMN08514443
229
GCA_003077455.1ContigQDLX00000000SAMN08514442
228
GCA_003077415.1ContigQDLV00000000SAMN08514444
230
GCA_003077385.1ContigQDLU00000000SAMN08514445
231
GCA_003077375.1ContigQDLT00000000SAMN08514446
232
GCA_003077345.1ContigQDLR00000000SAMN08514448
234
GCA_003077335.1ContigQDLS00000000SAMN08514447
233
GCA_003077315.1ContigQDLQ00000000SAMN08514449
235
GCA_003077295.1ContigQDLP00000000SAMN08514450
236
GCA_003077275.1ContigQDLO00000000SAMN08514451
237
GCA_003077255.1ContigQDLM00000000SAMN08514453
239
GCA_003077235.1ContigQDLL00000000SAMN08514454
240
GCA_003077215.1ContigQDLN00000000SAMN08514452
238
GCA_003077195.1ContigQDLK00000000SAMN08514455
241
GCA_003077175.1ContigQDLJ00000000SAMN08514456
242
GCA_003077155.1ContigQDLG00000000SAMN08514459
245
GCA_003077135.1ContigQDLI00000000SAMN08514457
243
GCA_003077115.1ContigQDLE00000000SAMN08514461
247
GCA_003077095.1ContigQDLF00000000SAMN08514460
246
GCA_003077075.1ContigQDLD00000000SAMN08514462
248
GCA_003077035.1ContigQDLC00000000SAMN08514463
249
GCA_003077055.1ContigQDLA00000000SAMN08514465
251
GCA_003077015.1ContigQDLB00000000SAMN08514464
250
GCA_003076995.1ContigQDKY00000000SAMN08514467
253
GCA_003076975.1ContigQDKZ00000000SAMN08514466
252
GCA_003076955.1ContigQDKX00000000SAMN08514468
254
GCA_003076935.1ContigQDKW00000000SAMN08514469
255
SRA Data Details
ParameterValue
Data volume, Gbases93
Data volume, Mbytes60105

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