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ASM2977527v1

Organism name:
Drosophila melanogaster (fruit fly)
Isolate:
dmeE_29_M0
Sex:
male
BioSample:
SAMN33508895
BioProject:
PRJNA939781
Submitter:
Univeristy of Edinburgh
Date:
2023/04/17
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_029775275.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
Assembly method:
CLC NGS Cell v. 1.0
Expected final version:
no
Reference guided assembly:
r6.42
Genome coverage:
30x
Sequencing technology:
Illumina HiSeq

IDs: 16450071 [UID] 42177428 [GenBank]

See Genome Information for Drosophila melanogaster

There are 121 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length133,880,608
Total ungapped length133,646,434
Gaps between scaffolds0
Number of scaffolds6
Scaffold N5025,286,936
Scaffold L503
Number of contigs65
Contig N5019,478,218
Contig L503
Total number of chromosomes and plasmids6
Number of component sequences (WGS or clone)6

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCA_029775285.1)
Molecule nameGenBank sequenceRefSeq sequence
Chromosome XCP122126.1n/an/a
Chromosome 2LCP122121.1n/an/a
Chromosome 2RCP122122.1n/an/a
Chromosome 3LCP122123.1n/an/a
Chromosome 3RCP122124.1n/an/a
Chromosome 4CP122125.1n/an/a

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
All133,880,6086133,646,43425,286,936590
Chromosome X23,542,271123,474,72923,542,271120
Chromosome 2L23,513,712123,513,51223,513,71220
Chromosome 2R25,286,936125,280,23625,286,93680
Chromosome 3L28,110,227127,992,06728,110,22790
Chromosome 3R32,079,331132,054,75932,079,331270
Chromosome 41,348,13111,331,1311,348,13110