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Taxonomy browser (Paraburkholderia fungorum)

Paraburkholderia fungorum

Taxonomy ID: 134537 (for references in articles please use NCBI:txid134537)
current name
Paraburkholderia fungorum (Coenye et al. 2001) Sawana et al. 2015 in [Validation List No. 164 (2015)]
homotypic synonym:
"Paraburkholderia fungorum" (Coenye et al. 2001) Sawana et al. 2014, effective name
Paraburkholderia fungorum (Coenye et al. 2001) Sawana et al. 2015 emend. Madhaiyan et al. 2022, emended name in [Madhaiyan M et al. (2022b)]
basionym:
Burkholderia fungorum Coenye et al. 2001 in [Coenye T et al. (2001)]
type strain of Burkholderia fungorum: CCUG:31961, CIP:107096, JCM:21562, BCCM/LMG:16225, NBRC:102489, personal::Croize P763-2, DSM:17061, ATCC:BAA-463
includes:
Burkholderia sp. LMG 16225
Burkholderia sp. LMG 16307
Burkholderia sp. LMG16225
Burkholderia sp. LMG16307
NCBI BLAST name: b-proteobacteria
Rank: species
Genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Paraburkholderia insulsa (Rusch et al. 2015) Dobritsa and Samadpour 2016
basionym:
Burkholderia insulsa Rusch et al. 2015 in [Rusch A et al. (2015)]
type strain of Burkholderia insulsa: personal::PNG-April, DSM:28142, BCCM/LMG:28183
includes:
Burkholderia sp. PNG-April
Pseudomonas sp. DSM 28142
Lineage( full )
cellular organisms; Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Paraburkholderia
   Entrez records   
Database name Subtree links Direct links Links from type
Nucleotide 2,297 2,048 348
Protein 135,225 135,225 -
Structure 1 1 -
Genome 1 1 -
Popset 23 23 -
GEO Datasets 4 4 -
PubMed Central 318 318 -
Gene 32,760 32,759 -
SRA Experiments 15 15 -
Identical Protein Groups 74,007 74,007 -
BioProject 22 21 -
BioSample 26 25 6
Assembly 20 19 -
Taxonomy 2 1 -

Comments and References:
Validation List No. 164 (2015)
Validation List No. 164: "List of new names and new combinations previously effectively, but not validly, published." Int. J. Syst. Evol. Microbiol. (2015) 65(7):2017-2025.
Madhaiyan M et al. (2022b), PubMed: abstract
Madhaiyan, M., Sriram, S., Kiruba, N., and Saravanan, V.S. "Genome-based reclassification of Paraburkholderia insulsa as a later heterotypic synonym of Paraburkholderia fungorum and proposal of Paraburkholderia terrae subsp. terrae subsp. nov. and Paraburkholderia terrae subsp. steynii subsp. nov." Curr. Microbiol. (2022) 79(12):358.
Coenye T et al. (2001), PubMed: abstract
Coenye, T., Laevens, S., Willems, A., Ohlen, M., Hannant, W., Govan, J.R.W., Gillis, M., Falsen, E., and Vandamme, P. "Burkholderia fungorum sp. nov. and Burkholderia caledonica sp. nov., two new species isolated from the environment, animals and human clinical samples." Int. J. Syst. Evol. Microbiol. (2001) 51(3):1099-1107.
Rusch A et al. (2015), PubMed: abstract
Rusch, A., Islam, S., Savalia, P., and Amend, J.P. "Burkholderia insulsa sp. nov., a facultatively chemolithotrophic bacterium isolated from an arsenic-rich shallow marine hydrothermal system." Int. J. Syst. Evol. Microbiol. (2015) 65(1):189-194.
Dobritsa AP & Samadpour M (2016)
Dobritsa, A.P., and Samadpour, M. "Transfer of eleven Burkholderia species to the genus Paraburkholderia and proposal of Caballeronia gen. nov. to accommodate twelve species of the genera Burkholderia and Paraburkholderia." Int. J. Syst. Evol. Microbiol. (2016) 66(8):2836-2846.
Sawana A et al. (2014)
Sawana, A., Adeolu, M., and Gupta, R.S. "Molecular signatures and phylogenomic analysis of the genus Burkholderia: proposal for division of this genus into the emended genus Burkholderia containing pathogenic organisms and a new genus Paraburkholderia gen. nov. harboring environmental species." Front. Genet. (2014) 5:429.

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Paraburkholderia fungorum meta-databases BacDive
4 records from this provider organism-specific BioCyc
Burkholderia fungorum Coenye et al. 2001 taxonomy/phylogenetic Encyclopedia of life
3 records from this provider organism-specific Genomes On Line Database
Burkholderia fungorum culture/stock collections Global Catalogue of Microorganisms
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
7 records from this provider organism-specific Integrated Microbial Genomes
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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