6GKK: Translation initiation factor 4E in complex with beta-phosphorothioate trinucleotide mRNA 5' cap diastereomer 1 (m7GppSpApG D1)

PDB ID: 6GKKDownload
MMDB ID: 176471
PDB Deposition Date: 2018/5/21
Updated in MMDB: 2019/07
Experimental Method:
x-ray diffraction
Resolution: 1.858  Å
Source Organism:
Similar Structures:
Biological Unit for 6GKK: monomeric; determined by author
Molecular Components in 6GKK
Label Count Molecule
Protein (1 molecule)
1
Eukaryotic Translation Initiation Factor 4E
(Gene symbol: Eif4e)
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
1
[(2~{R},3~{R},4~{R},5~{R})-5-(2-azanyl-7-methyl-6-oxidanylidene-1~{H}-purin-7-ium-9-yl)-4-methoxy-3-oxidanyl-oxolan-2-yl]methyl [phosphonooxy(sulfanyl)phosphoryl] hydrogen phosphate[(2~{R},3~{R},4~{R},5~{R})-5-(2-azanyl-7-methyl-6-oxidanylidene-1~{H}-purin-7-ium-9-yl)-4-methoxy-3-oxidanyl-oxolan-2-yl]methyl [phosphonooxy(sulfanyl)phosphoryl] hydrogen phosphate
2
2
GLYCEROLGLYCEROL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303