6CPL: Crystal structure of DR11 presenting the gag293 epitope

PDB ID: 6CPLDownload
MMDB ID: 162983
PDB Deposition Date: 2018/3/13
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.45  Å
Source Organism:
HIV-1 M:B_HXB2R▼
Similar Structures:
Biological Unit for 6CPL: trimeric; determined by author and by software (PISA)
Molecular Components in 6CPL
Label Count Molecule
Proteins (3 molecules)
1
HLA Class II Histocompatibility Antigen, DR Alpha Chain
Molecule annotation
1
HLA Class II Histocompatibility Antigen, Drb1-11 Beta Chain
Molecule annotation
1
GAG Polyprotein
Molecule annotation
Chemicals and Non-standard biopolymers (14 molecules)
1
4
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
5
SULFATE IONSULFATE ION
3
3
SODIUM IONSODIUM ION
4
2
ACETATE IONACETATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303