5WBN: Crystal structure of fragment 3-(3-Benzyl-2-oxo-2H-[1,2,4]triazino[2,3-c]quinazolin-6-yl)propanoic acid bound in the ubiquitin binding pocket of the HDAC6 zinc-finger domain

PDB ID: 5WBNDownload
MMDB ID: 153258
PDB Deposition Date: 2017/6/29
Updated in MMDB: 2017/08
Experimental Method:
x-ray diffraction
Resolution: 1.64  Å
Source Organism:
Similar Structures:
Biological Unit for 5WBN: monomeric; determined by author and by software (PISA)
Molecular Components in 5WBN
Label Count Molecule
Protein (1 molecule)
1
Histone Deacetylase 6
(Gene symbol: HDAC6)
Molecule annotation
Chemicals and Non-standard biopolymers (18 molecules)
1
3
ZINC IONZINC ION
2
1
3-(3-benzyl-2-oxo-2H-[1,2,4]triazino[2,3-c]quinazolin-6-yl)propanoic acid3-(3-benzyl-2-oxo-2H-[1,2,4]triazino[2,3-c]quinazolin-6-yl)propanoic acid
3
8
Molecule information is not available.
4
3
FORMIC ACIDFORMIC ACID
5
1
CHLORIDE IONCHLORIDE ION
6
2
ACETATE IONACETATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303