2HBM: Structure of the yeast nuclear exosome component, Rrp6p, reveals an interplay between the active site and the HRDC domain; Protein in complex with Mn, Zn, and UMP

PDB ID: 2HBMDownload
MMDB ID: 40558
PDB Deposition Date: 2006/6/14
Updated in MMDB: 2021/11
Experimental Method:
x-ray diffraction
Resolution: 2.7  Å
Source Organism:
Similar Structures:
Biological Unit for 2HBM: monomeric; determined by author and by software (PISA)
Molecular Components in 2HBM
Label Count Molecule
Protein (1 molecule)
1
Exosome Complex Exonuclease Rrp6
(Gene symbol: RRP6)
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
1
ZINC IONZINC ION
2
1
MANGANESE (II) IONMANGANESE (II) ION
3
1
URIDINE-5'-MONOPHOSPHATEURIDINE-5'-MONOPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303