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Conserved domains on  [gi|1720410054|ref|XP_030109692|]
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leucine-rich repeat-containing protein 69 isoform X1 [Mus musculus]

Protein Classification

leucine-rich repeat domain-containing protein( domain architecture ID 11469232)

leucine-rich repeat (LRR) domain-containing protein may participate in protein-protein interactions

CATH:  3.80.10.10
Gene Ontology:  GO:0005515
PubMed:  11751054|7583641

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
11-261 2.31e-36

Leucine-rich repeat (LRR) protein [Transcription];


:

Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 136.60  E-value: 2.31e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054  11 ILKIYNNSSSIMVTSSKIMAERLLVTALKGGKNTKILTLNGKRITKMPSTLEKLPNLKTLDLQNNsiskvcPELRTLTQL 90
Cdd:COG4886    42 LLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGN------EELSNLTNL 115

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054  91 TLLNLGNNHLQEVPEEIKYLTSLKNLHLFGNRICRIaPGVFNGLHRLIMLNLNDNRLTSLPQEIGRLRSLTYLSLNRNNL 170
Cdd:COG4886   116 ESLDLSGNQLTDLPEELANLTNLKELDLSNNQLTDL-PEPLGNLTNLKSLDLSNNQLTDLPEELGNLTNLKELDLSNNQI 194

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 171 TVIPKELCSLEHLSELHLNYNQIVYIPEEIKFLKNLQQLFLVRNNIEELPEeICHLEKLRVLDIAGNVIQIFPAGFQNLR 250
Cdd:COG4886   195 TDLPEPLGNLTNLEELDLSGNQLTDLPEPLANLTNLETLDLSNNQLTDLPE-LGNLTNLEELDLSNNQLTDLPPLANLTN 273

                         250
                  ....*....|.
gi 1720410054 251 LTEFYCEGNPL 261
Cdd:COG4886   274 LKTLDLSNNQL 284
 
Name Accession Description Interval E-value
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
11-261 2.31e-36

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 136.60  E-value: 2.31e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054  11 ILKIYNNSSSIMVTSSKIMAERLLVTALKGGKNTKILTLNGKRITKMPSTLEKLPNLKTLDLQNNsiskvcPELRTLTQL 90
Cdd:COG4886    42 LLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGN------EELSNLTNL 115

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054  91 TLLNLGNNHLQEVPEEIKYLTSLKNLHLFGNRICRIaPGVFNGLHRLIMLNLNDNRLTSLPQEIGRLRSLTYLSLNRNNL 170
Cdd:COG4886   116 ESLDLSGNQLTDLPEELANLTNLKELDLSNNQLTDL-PEPLGNLTNLKSLDLSNNQLTDLPEELGNLTNLKELDLSNNQI 194

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 171 TVIPKELCSLEHLSELHLNYNQIVYIPEEIKFLKNLQQLFLVRNNIEELPEeICHLEKLRVLDIAGNVIQIFPAGFQNLR 250
Cdd:COG4886   195 TDLPEPLGNLTNLEELDLSGNQLTDLPEPLANLTNLETLDLSNNQLTDLPE-LGNLTNLEELDLSNNQLTDLPPLANLTN 273

                         250
                  ....*....|.
gi 1720410054 251 LTEFYCEGNPL 261
Cdd:COG4886   274 LKTLDLSNNQL 284
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 47-237 8.53e-18

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 85.28  E-value: 8.53e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054  47 LTLNGKRIT-KMPSTLEKLPNLKTLDLQNNSISKVCPE--LRTLTQLTLLNLGNNHLQ---------------------- 101
Cdd:PLN00113   74 IDLSGKNISgKISSAIFRLPYIQTINLSNNQLSGPIPDdiFTTSSSLRYLNLSNNNFTgsiprgsipnletldlsnnmls 153

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 102 -EVPEEIKYLTSLKNLHLFGNRICRIAPGVFNGLHRLIMLNLNDNRLT-SLPQEIGRLRSLTYLSLNRNNLT-VIPKELC 178
Cdd:PLN00113  154 gEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVgQIPRELGQMKSLKWIYLGYNNLSgEIPYEIG 233

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720410054 179 SLEHLSELHLNYNQIV-YIPEEIKFLKNLQQLFLVRNNIE-ELPEEICHLEKLRVLDIAGN 237
Cdd:PLN00113  234 GLTSLNHLDLVYNNLTgPIPSSLGNLKNLQYLFLYQNKLSgPIPPSIFSLQKLISLDLSDN 294
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 105-261 5.02e-14

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 70.59  E-value: 5.02e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 105 EEIKYLTSLKNLHLFGNRICRIAPgvFNGLHRLIMLNLNDNRLTSLpQEIGRLRSLTYLSLNRNNLTVIpKELCSLEHLS 184
Cdd:cd21340    18 DNLSLCKNLKVLYLYDNKITKIEN--LEFLTNLTHLYLQNNQIEKI-ENLENLVNLKKLYLGGNRISVV-EGLENLTNLE 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 185 ELHLNYNQivyIPEEIKFL----------KNLQQLFLVRNNIEELpEEICHLEKLRVLDIAGNVIQ----IFPAGFQNLR 250
Cdd:cd21340    94 ELHIENQR---LPPGEKLTfdprslaalsNSLRVLNISGNNIDSL-EPLAPLRNLEQLDASNNQISdleeLLDLLSSWPS 169

                         170
                  ....*....|.
gi 1720410054 251 LTEFYCEGNPL 261
Cdd:cd21340   170 LRELDLTGNPV 180
LRR_8 pfam13855
Leucine rich repeat;
111-170 2.54e-10

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 55.61  E-value: 2.54e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720410054 111 TSLKNLHLFGNRICRIAPGVFNGLHRLIMLNLNDNRLTSL-PQEIGRLRSLTYLSLNRNNL 170
Cdd:pfam13855   1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLsPGAFSGLPSLRYLDLSGNRL 61
 
Name Accession Description Interval E-value
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
11-261 2.31e-36

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 136.60  E-value: 2.31e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054  11 ILKIYNNSSSIMVTSSKIMAERLLVTALKGGKNTKILTLNGKRITKMPSTLEKLPNLKTLDLQNNsiskvcPELRTLTQL 90
Cdd:COG4886    42 LLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLLLLSLLLLGLTDLGDLTNLTELDLSGN------EELSNLTNL 115

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054  91 TLLNLGNNHLQEVPEEIKYLTSLKNLHLFGNRICRIaPGVFNGLHRLIMLNLNDNRLTSLPQEIGRLRSLTYLSLNRNNL 170
Cdd:COG4886   116 ESLDLSGNQLTDLPEELANLTNLKELDLSNNQLTDL-PEPLGNLTNLKSLDLSNNQLTDLPEELGNLTNLKELDLSNNQI 194

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 171 TVIPKELCSLEHLSELHLNYNQIVYIPEEIKFLKNLQQLFLVRNNIEELPEeICHLEKLRVLDIAGNVIQIFPAGFQNLR 250
Cdd:COG4886   195 TDLPEPLGNLTNLEELDLSGNQLTDLPEPLANLTNLETLDLSNNQLTDLPE-LGNLTNLEELDLSNNQLTDLPPLANLTN 273

                         250
                  ....*....|.
gi 1720410054 251 LTEFYCEGNPL 261
Cdd:COG4886   274 LKTLDLSNNQL 284
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
36-311 1.18e-23

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 101.16  E-value: 1.18e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054  36 TALKGGKNTKILTLNGKRITKMPSTLEKLPNLKTLDLQNNSISKVCPELRTLTQLTLLNLGNNHLQEVPEEIKYLTSLKN 115
Cdd:COG4886   107 EELSNLTNLESLDLSGNQLTDLPEELANLTNLKELDLSNNQLTDLPEPLGNLTNLKSLDLSNNQLTDLPEELGNLTNLKE 186

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 116 LHLFGNRICRIaPGVFNGLHRLIMLNLNDNRLTSLPQEIGRLRSLTYLSLNRNNLTVIPK-------------------- 175
Cdd:COG4886   187 LDLSNNQITDL-PEPLGNLTNLEELDLSGNQLTDLPEPLANLTNLETLDLSNNQLTDLPElgnltnleeldlsnnqltdl 265

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 176 -ELCSLEHLSELHLNYNQIVYIPEEIKFLKNLQQLFLVRNNIEELPEEICHLEKLRVLDIAGNVIQIFPAGFQNLRLTEF 254
Cdd:COG4886   266 pPLANLTNLKTLDLSNNQLTDLKLKELELLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSLS 345

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1720410054 255 YCEGNPLFLKRPFFAVQPKDLWTLREIAARFVLSLLEENDPLIMNVIESYPEVKDKL 311
Cdd:COG4886   346 LLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLL 402
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 47-237 8.53e-18

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 85.28  E-value: 8.53e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054  47 LTLNGKRIT-KMPSTLEKLPNLKTLDLQNNSISKVCPE--LRTLTQLTLLNLGNNHLQ---------------------- 101
Cdd:PLN00113   74 IDLSGKNISgKISSAIFRLPYIQTINLSNNQLSGPIPDdiFTTSSSLRYLNLSNNNFTgsiprgsipnletldlsnnmls 153

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 102 -EVPEEIKYLTSLKNLHLFGNRICRIAPGVFNGLHRLIMLNLNDNRLT-SLPQEIGRLRSLTYLSLNRNNLT-VIPKELC 178
Cdd:PLN00113  154 gEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVgQIPRELGQMKSLKWIYLGYNNLSgEIPYEIG 233

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720410054 179 SLEHLSELHLNYNQIV-YIPEEIKFLKNLQQLFLVRNNIE-ELPEEICHLEKLRVLDIAGN 237
Cdd:PLN00113  234 GLTSLNHLDLVYNNLTgPIPSSLGNLKNLQYLFLYQNKLSgPIPPSIFSLQKLISLDLSDN 294
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
34-229 1.50e-15

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 77.67  E-value: 1.50e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054  34 LVTALKGGKNTKILTLNGKRITKMPSTLEKLPNLKTLDLQNNSISKVCPELRTLTQLTLLNLGNNHLQEVPEEIKYLTSL 113
Cdd:COG4886   151 LPEPLGNLTNLKSLDLSNNQLTDLPEELGNLTNLKELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDLPEPLANLTNL 230

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 114 KNLHLFGNRICRIApgVFNGLHRLIMLNLNDNRLTSLPqEIGRLRSLTYLSLNRNNLTVIP-KELCSLEHLSELHLNYNQ 192
Cdd:COG4886   231 ETLDLSNNQLTDLP--ELGNLTNLEELDLSNNQLTDLP-PLANLTNLKTLDLSNNQLTDLKlKELELLLGLNSLLLLLLL 307

                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 1720410054 193 IVYIPEEIKFLKNLQQLFLVRNNIEELPEEICHLEKL 229
Cdd:COG4886   308 LNLLELLILLLLLTTLLLLLLLLKGLLVTLTTLALSL 344
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 57-240 5.62e-15

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 76.43  E-value: 5.62e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054  57 MPSTLEKLPNLKTLDLQNNSIS-KVCPELRTLTQLTLLNLGNNHLQ-EVPEEIKYLTSLKNLHLFGNRICRIAPGVFNGL 134
Cdd:PLN00113  252 IPSSLGNLKNLQYLFLYQNKLSgPIPPSIFSLQKLISLDLSDNSLSgEIPELVIQLQNLEILHLFSNNFTGKIPVALTSL 331

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 135 HRLIMLNLNDNRLT-SLPQEIGRLRSLTYLSLNRNNLT-VIPKELCSLEHLSELHLNYNQIV-YIPEEIKFLKNLQQLFL 211
Cdd:PLN00113  332 PRLQVLQLWSNKFSgEIPKNLGKHNNLTVLDLSTNNLTgEIPEGLCSSGNLFKLILFSNSLEgEIPKSLGACRSLRRVRL 411

                         170       180       190
                  ....*....|....*....|....*....|
gi 1720410054 212 VRNNIE-ELPEEICHLEKLRVLDIAGNVIQ 240
Cdd:PLN00113  412 QDNSFSgELPSEFTKLPLVYFLDISNNNLQ 441
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 105-261 5.02e-14

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 70.59  E-value: 5.02e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 105 EEIKYLTSLKNLHLFGNRICRIAPgvFNGLHRLIMLNLNDNRLTSLpQEIGRLRSLTYLSLNRNNLTVIpKELCSLEHLS 184
Cdd:cd21340    18 DNLSLCKNLKVLYLYDNKITKIEN--LEFLTNLTHLYLQNNQIEKI-ENLENLVNLKKLYLGGNRISVV-EGLENLTNLE 93

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 185 ELHLNYNQivyIPEEIKFL----------KNLQQLFLVRNNIEELpEEICHLEKLRVLDIAGNVIQ----IFPAGFQNLR 250
Cdd:cd21340    94 ELHIENQR---LPPGEKLTfdprslaalsNSLRVLNISGNNIDSL-EPLAPLRNLEQLDASNNQISdleeLLDLLSSWPS 169

                         170
                  ....*....|.
gi 1720410054 251 LTEFYCEGNPL 261
Cdd:cd21340   170 LRELDLTGNPV 180
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 47-237 8.37e-14

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 69.81  E-value: 8.37e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054  47 LTLNGKRITKMPStLEKLPNLKTLDLQNNSISKVcpelrtltqltllnlgnnhlqevpEEIKYLTSLKNLHLFGNRICRI 126
Cdd:cd21340     7 LYLNDKNITKIDN-LSLCKNLKVLYLYDNKITKI------------------------ENLEFLTNLTHLYLQNNQIEKI 61

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 127 APgvFNGLHRLIMLNLNDNRLTSLpQEIGRLRSLTYLSLNRNN------LTVIPKELCSL-EHLSELHLNYNQIVYIpEE 199
Cdd:cd21340    62 EN--LENLVNLKKLYLGGNRISVV-EGLENLTNLEELHIENQRlppgekLTFDPRSLAALsNSLRVLNISGNNIDSL-EP 137

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1720410054 200 IKFLKNLQQLFLVRNNIEELpEEIC----HLEKLRVLDIAGN 237
Cdd:cd21340   138 LAPLRNLEQLDASNNQISDL-EELLdllsSWPSLRELDLTGN 178
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 43-229 3.78e-12

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 67.95  E-value: 3.78e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054  43 NTKILTLNGKRIT-KMPSTLEKLPNLKTLDLQNNSISKVCP-ELRTLTQLTLLNLGNNHLQ-EVPEEIKYLTSLKNLHLF 119
Cdd:PLN00113  165 SLKVLDLGGNVLVgKIPNSLTNLTSLEFLTLASNQLVGQIPrELGQMKSLKWIYLGYNNLSgEIPYEIGGLTSLNHLDLV 244

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 120 GNRIC-------------------------RIAPGVFnGLHRLIMLNLNDNRLT-SLPQEIGRLRSLTYLSLNRNNLT-V 172
Cdd:PLN00113  245 YNNLTgpipsslgnlknlqylflyqnklsgPIPPSIF-SLQKLISLDLSDNSLSgEIPELVIQLQNLEILHLFSNNFTgK 323

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720410054 173 IPKELCSLEHLSELHLNYNQIV-YIPEEIKFLKNLQQLFLVRNNIE-ELPEEIC---HLEKL 229
Cdd:PLN00113  324 IPVALTSLPRLQVLQLWSNKFSgEIPKNLGKHNNLTVLDLSTNNLTgEIPEGLCssgNLFKL 385
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
37-263 2.06e-11

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 64.95  E-value: 2.06e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054  37 ALKGGKNTKILTLNGKRITKMPSTLEKLPNLKTLDLQNNSISKVCPELRTLTQLTLLNLGNNHLQEVPEeIKYLTSLKNL 116
Cdd:COG4886   177 ELGNLTNLKELDLSNNQITDLPEPLGNLTNLEELDLSGNQLTDLPEPLANLTNLETLDLSNNQLTDLPE-LGNLTNLEEL 255

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 117 HLFGNRICRIAPGVfnGLHRLIMLNLNDNRLTSL-------PQEIGRLRSLTYLSLNRNNLTVIPKELCSLEHLSELHLN 189
Cdd:COG4886   256 DLSNNQLTDLPPLA--NLTNLKTLDLSNNQLTDLklkelelLLGLNSLLLLLLLLNLLELLILLLLLTTLLLLLLLLKGL 333

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720410054 190 YNQIVYIPEEIKFLKNLQQLFLVRNNIEELPEEICHLEKLRVLDIAGNVIQIFPAGFQNLRLTEFYCEGNPLFL 263
Cdd:COG4886   334 LVTLTTLALSLSLLALLTLLLLLNLLSLLLTLLLTLGLLGLLEATLLTLALLLLTLLLLLLTTTAGVLLLTLAL 407
PRK15370 PRK15370
type III secretion system effector E3 ubiquitin transferase SlrP;
42-261 3.09e-11

type III secretion system effector E3 ubiquitin transferase SlrP;


Pssm-ID: 185268 [Multi-domain]  Cd Length: 754  Bit Score: 64.72  E-value: 3.09e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054  42 KNTKILTLNGKRITKMPSTLEKlpNLKTLDLQNNSIsKVCPELRTLTQLTLLNLGNNhLQEVPEEIKylTSLKNLHLFGN 121
Cdd:PRK15370  178 NNKTELRLKILGLTTIPACIPE--QITTLILDNNEL-KSLPENLQGNIKTLYANSNQ-LTSIPATLP--DTIQEMELSIN 251

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 122 RICRIAPGVFNGLHRLImlnLNDNRLTSLPQEIGRlrSLTYLSLNRNNLTVIPKELCSleHLSELHLNYNQIVYIPEEIK 201
Cdd:PRK15370  252 RITELPERLPSALQSLD---LFHNKISCLPENLPE--ELRYLSVYDNSIRTLPAHLPS--GITHLNVQSNSLTALPETLP 324

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 202 flKNLQQLFLVRNNIEELPEEIChlEKLRVLDIAGNVIQIFPAGFQNlRLTEFYCEGNPL 261
Cdd:PRK15370  325 --PGLKTLEAGENALTSLPASLP--PELQVLDVSKNQITVLPETLPP-TITTLDVSRNAL 379
LRR_8 pfam13855
Leucine rich repeat;
111-170 2.54e-10

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 55.61  E-value: 2.54e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720410054 111 TSLKNLHLFGNRICRIAPGVFNGLHRLIMLNLNDNRLTSL-PQEIGRLRSLTYLSLNRNNL 170
Cdd:pfam13855   1 PNLRSLDLSNNRLTSLDDGAFKGLSNLKVLDLSNNLLTTLsPGAFSGLPSLRYLDLSGNRL 61
LRR_8 pfam13855
Leucine rich repeat;
136-193 5.57e-08

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 49.06  E-value: 5.57e-08
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 136 RLIMLNLNDNRLTSLPQEI-GRLRSLTYLSLNRNNLTVI-PKELCSLEHLSELHLNYNQI 193
Cdd:pfam13855   2 NLRSLDLSNNRLTSLDDGAfKGLSNLKVLDLSNNLLTTLsPGAFSGLPSLRYLDLSGNRL 61
LRR_8 pfam13855
Leucine rich repeat;
158-216 5.80e-07

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 45.98  E-value: 5.80e-07
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720410054 158 RSLTYLSLNRNNLTVIPKE-LCSLEHLSELHLNYNQIVYI-PEEIKFLKNLQQLFLVRNNI 216
Cdd:pfam13855   1 PNLRSLDLSNNRLTSLDDGaFKGLSNLKVLDLSNNLLTTLsPGAFSGLPSLRYLDLSGNRL 61
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 56-214 6.72e-07

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 51.39  E-value: 6.72e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054  56 KMPSTLEKLPNLKTLDLQNNSISKVCPELR--TLTQLTLLNLGNNHLQEVPEEIKYlTSLKNLHLFGNRICRIAPGVFNG 133
Cdd:PLN00113  419 ELPSEFTKLPLVYFLDISNNNLQGRINSRKwdMPSLQMLSLARNKFFGGLPDSFGS-KRLENLDLSRNQFSGAVPRKLGS 497

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 134 LHRLIMLNLNDNRLTS-LPQEIGRLRSLTYLSLNRNNLT-VIPKELCSLEHLSELHLNYNQIV-YIPEEIKFLKNLQQLF 210
Cdd:PLN00113  498 LSELMQLKLSENKLSGeIPDELSSCKKLVSLDLSHNQLSgQIPASFSEMPVLSQLDLSQNQLSgEIPKNLGNVESLVQVN 577


                  ....
gi 1720410054 211 LVRN 214
Cdd:PLN00113  578 ISHN 581
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 45-237 1.97e-06

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 49.85  E-value: 1.97e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054  45 KILTLNGKRIT-KMPSTLEKLPNLKTLDLQNNSISKVCPELRTLT--QLTLLNLGNNHLQEVPEEIKYLTSLKNLHLFGN 121
Cdd:PLN00113  335 QVLQLWSNKFSgEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSgnLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDN 414

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 122 RICRIAPGVFNGLHRLIMLNLNDNRLT-------------------------SLPQEIGRLRsLTYLSLNRNNLT-VIPK 175
Cdd:PLN00113  415 SFSGELPSEFTKLPLVYFLDISNNNLQgrinsrkwdmpslqmlslarnkffgGLPDSFGSKR-LENLDLSRNQFSgAVPR 493

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720410054 176 ELCSLEHLSELHLNYNQIV-YIPEEIKFLKNLQQLFLVRNNIE-ELPEEICHLEKLRVLDIAGN 237
Cdd:PLN00113  494 KLGSLSELMQLKLSENKLSgEIPDELSSCKKLVSLDLSHNQLSgQIPASFSEMPVLSQLDLSQN 557
PPP1R42 cd21340
protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 ...
 38-175 4.76e-06

protein phosphatase 1 regulatory subunit 42; Protein phosphatase 1 regulatory subunit 42 (PPP1R42), also known as leucine-rich repeat-containing protein 67 (lrrc67) or testis leucine-rich repeat (TLRR) protein, plays a role in centrosome separation. PPP1R42 has been shown to interact with the well-conserved signaling protein phosphatase-1 (PP1) and thereby increasing PP1's activity, which counters centrosome separation. Inhibition of PPP1R42 expression increases the number of centrosomes per cell while its depletion reduces the activity of PP1 leading to activation of NEK2, the kinase responsible for phosphorylation of centrosomal linker proteins promoting centrosome separation.


Pssm-ID: 411060 [Multi-domain]  Cd Length: 220  Bit Score: 47.09  E-value: 4.76e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054  38 LKGGKNTKILTLNGKRITKMPStLEKLPNLKTLDLQNNSISKVCPELRTLTQLTLLNLGNN----------------HL- 100
Cdd:cd21340    20 LSLCKNLKVLYLYDNKITKIEN-LEFLTNLTHLYLQNNQIEKIENLENLVNLKKLYLGGNRisvveglenltnleelHIe 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 101 -QEVPEE---------IKYL-TSLKNLHLFGNRICRIAPgvFNGLHRLIMLNLNDNRLTSLP---QEIGRLRSLTYLSLN 166
Cdd:cd21340    99 nQRLPPGekltfdprsLAALsNSLRVLNISGNNIDSLEP--LAPLRNLEQLDASNNQISDLEellDLLSSWPSLRELDLT 176


                  ....*....
gi 1720410054 167 RNNLTVIPK 175
Cdd:cd21340   177 GNPVCKKPK 185
PRK15387 PRK15387
type III secretion system effector E3 ubiquitin transferase SspH2;
51-237 7.85e-06

type III secretion system effector E3 ubiquitin transferase SspH2;


Pssm-ID: 185285 [Multi-domain]  Cd Length: 788  Bit Score: 47.85  E-value: 7.85e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054  51 GKRITKMPSTLEKLPNLKTLDLQNNSISKVCPELRTLTQLtllnlgNNHLQEVPeeiKYLTSLKNLHLFGNRICRIaPGV 130
Cdd:PRK15387  291 GNQLTSLPVLPPGLQELSVSDNQLASLPALPSELCKLWAY------NNQLTSLP---TLPSGLQELSVSDNQLASL-PTL 360

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 131 FNGLHRLIMLNlndNRLTSLPQEIGRLRSLTyLSLNR-NNLTVIPKELcslehlSELHLNYNQIVYIPeeiKFLKNLQQL 209
Cdd:PRK15387  361 PSELYKLWAYN---NRLTSLPALPSGLKELI-VSGNRlTSLPVLPSEL------KELMVSGNRLTSLP---MLPSGLLSL 427

                         170       180
                  ....*....|....*....|....*...
gi 1720410054 210 FLVRNNIEELPEEICHLEKLRVLDIAGN 237
Cdd:PRK15387  428 SVYRNQLTRLPESLIHLSSETTVNLEGN 455
LRR_8 pfam13855
Leucine rich repeat;
65-147 3.69e-05

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 40.97  E-value: 3.69e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054  65 PNLKTLDLQNNSISKVCPELrtltqltllnlgnnhlqevpeeIKYLTSLKNLHLFGNRICRIAPGVFNGLHRLIMLNLND 144
Cdd:pfam13855   1 PNLRSLDLSNNRLTSLDDGA----------------------FKGLSNLKVLDLSNNLLTTLSPGAFSGLPSLRYLDLSG 58


                  ...
gi 1720410054 145 NRL 147
Cdd:pfam13855  59 NRL 61
LRR_8 pfam13855
Leucine rich repeat;
182-239 3.69e-05

Leucine rich repeat;


Pssm-ID: 404697 [Multi-domain]  Cd Length: 61  Bit Score: 40.97  E-value: 3.69e-05
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 182 HLSELHLNYNQIVYIPEEI-KFLKNLQQLFLVRNNIEEL-PEEICHLEKLRVLDIAGNVI 239
Cdd:pfam13855   2 NLRSLDLSNNRLTSLDDGAfKGLSNLKVLDLSNNLLTTLsPGAFSGLPSLRYLDLSGNRL 61
PLN03150 PLN03150
hypothetical protein; Provisional
 103-171 5.38e-05

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 45.19  E-value: 5.38e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 103 VPEEIKYLTSLKNLHLFGNRICRIAPGVFNGLHRLIMLNLNDNRLT-SLPQEIGRLRSLTYLSLNRNNLT 171
Cdd:PLN03150  434 IPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNgSIPESLGQLTSLRILNLNGNSLS 503
RNA1 COG5238
Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ...
 61-249 7.25e-05

Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Translation, ribosomal structure and biogenesis];


Pssm-ID: 444072 [Multi-domain]  Cd Length: 434  Bit Score: 44.40  E-value: 7.25e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054  61 LEKLPNLKTLDLQNNSIskvcpelrtltqltllnlGNNHLQEVPEEIKYLTSLKNLHLFGNRI-CRIAPGVFNGL---HR 136
Cdd:COG5238   204 LTQNTTVTTLWLKRNPI------------------GDEGAEILAEALKGNKSLTTLDLSNNQIgDEGVIALAEALknnTT 265

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 137 LIMLNLNDNRLT-----SLPQEIGRLRSLTYLSLNRNNLT-----VIPKELCSLEHLSELHLNYNQI-----VYIPEEIK 201
Cdd:COG5238   266 VETLYLSGNQIGaegaiALAKALQGNTTLTSLDLSVNRIGdegaiALAEGLQGNKTLHTLNLAYNGIgaqgaIALAKALQ 345

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1720410054 202 FLKNLQQLFLVRNNI-----EELPEEICHLEKLRVLDIAGNviQIFPAGFQNL 249
Cdd:COG5238   346 ENTTLHSLDLSDNQIgdegaIALAKYLEGNTTLRELNLGKN--NIGKQGAEAL 396
LRR_9 pfam14580
Leucine-rich repeat;
109-174 2.51e-04

Leucine-rich repeat;


Pssm-ID: 405295 [Multi-domain]  Cd Length: 175  Bit Score: 41.29  E-value: 2.51e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720410054 109 YLTSLKNLHLFGNRICRIAPGVFNGLHRLIMLNLNDNRLTSL--PQEIGRLRSLTYLSLNRNNLTVIP 174
Cdd:pfam14580  62 LLRRLKTLLLNNNRICRIGEGLGEALPNLTELILTNNNLQELgdLDPLASLKKLTFLSLLRNPVTNKP 129
LRR COG4886
Leucine-rich repeat (LRR) protein [Transcription];
109-261 3.11e-04

Leucine-rich repeat (LRR) protein [Transcription];


Pssm-ID: 443914 [Multi-domain]  Cd Length: 414  Bit Score: 42.61  E-value: 3.11e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 109 YLTSLKNLHLFGNRICRIAPGVFNGLHRLIMLNLNDNRLTSLPQEIGRLRSLTYLSLNRNNLTVIPKELCSLEHLSELHL 188
Cdd:COG4886     1 LLLLLLSLTLKLLLLLLLELLTTLILLLLLLLLLLALLLLSLLSLLLLLTLLLSLLLRDLLLSSLLLLLSLLLLLLLSLL 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1720410054 189 NYNQIVYIPEEIKFLKNLQQLFLVRNNieelpeEICHLEKLRVLDIAGNVIQIFPAGFQNLR-LTEFYCEGNPL 261
Cdd:COG4886    81 LLSLLLLGLTDLGDLTNLTELDLSGNE------ELSNLTNLESLDLSGNQLTDLPEELANLTnLKELDLSNNQL 148
PLN03150 PLN03150
hypothetical protein; Provisional
 57-145 6.89e-04

hypothetical protein; Provisional


Pssm-ID: 178695 [Multi-domain]  Cd Length: 623  Bit Score: 41.73  E-value: 6.89e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054  57 MPSTLEKLPNLKTLDLQNNSISKVCPELR-TLTQLTLLNLGNNHLQ-EVPEEIKYLTSLKNLHLFGNRICRIAPGVFNG- 133
Cdd:PLN03150  434 IPNDISKLRHLQSINLSGNSIRGNIPPSLgSITSLEVLDLSYNSFNgSIPESLGQLTSLRILNLNGNSLSGRVPAALGGr 513

                          90
                  ....*....|...
gi 1720410054 134 -LHRLIMlNLNDN 145
Cdd:PLN03150  514 lLHRASF-NFTDN 525
PLN03210 PLN03210
Resistant to P. syringae 6; Provisional
 47-235 8.57e-04

Resistant to P. syringae 6; Provisional


Pssm-ID: 215633 [Multi-domain]  Cd Length: 1153  Bit Score: 41.40  E-value: 8.57e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054   47 LTLNGKRITKMPSTLEKLPNLKTLDLQNNSISKVCPELRTLTQLTLLNLGN-NHLQEVPEEIKYLTSLKNLHLFGNRICR 125
Cdd:PLN03210   616 LQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDcSSLVELPSSIQYLNKLEDLDMSRCENLE 695

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054  126 IAPGVFNgLHRLIMLNLND-NRLTSLPqEIGrlRSLTYLSLNRNNLTVIPKELcSLEHLSELHLNYNQIVYIPEEIKFLK 204
Cdd:PLN03210   696 ILPTGIN-LKSLYRLNLSGcSRLKSFP-DIS--TNISWLDLDETAIEEFPSNL-RLENLDELILCEMKSEKLWERVQPLT 770

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|
gi 1720410054  205 --------NLQQLFLVRN-NIEELPEEICHLEKLRVLDIA 235
Cdd:PLN03210   771 plmtmlspSLTRLFLSDIpSLVELPSSIQNLHKLEHLEIE 810
LRR_RI cd00116
Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 ...
 58-239 3.04e-03

Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).


Pssm-ID: 238064 [Multi-domain]  Cd Length: 319  Bit Score: 39.26  E-value: 3.04e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054  58 PSTLEKLPNLKTLDLQNNSISKvcpelrtltqltllnlgnnHLQEVPEEIKYLTSLKNLHLFGNRI-CRIAPGVFNGL-- 134
Cdd:cd00116    74 LQGLTKGCGLQELDLSDNALGP-------------------DGCGVLESLLRSSSLQELKLNNNGLgDRGLRLLAKGLkd 134

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 135 --HRLIMLNLNDNRLTSlpqeigrlRSLTYLSlnrnnltvipKELCSLEHLSELHLNYNQ-----IVYIPEEIKFLKNLQ 207
Cdd:cd00116   135 lpPALEKLVLGRNRLEG--------ASCEALA----------KALRANRDLKELNLANNGigdagIRALAEGLKANCNLE 196

                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 1720410054 208 QLFLVRNNIEE-----LPEEICHLEKLRVLDIAGNVI 239
Cdd:cd00116   197 VLDLNNNGLTDegasaLAETLASLKSLEVLNLGDNNL 233
PLN00113 PLN00113
leucine-rich repeat receptor-like protein kinase; Provisional
 113-254 4.08e-03

leucine-rich repeat receptor-like protein kinase; Provisional


Pssm-ID: 215061 [Multi-domain]  Cd Length: 968  Bit Score: 39.45  E-value: 4.08e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720410054 113 LKNLHLFGNRIC-RIAPGVFnGLHRLIMLNLNDNRLT-SLPQEIGRL-RSLTYLSLNRNNLT-VIPKelcslehlselhl 188
Cdd:PLN00113   71 VVSIDLSGKNISgKISSAIF-RLPYIQTINLSNNQLSgPIPDDIFTTsSSLRYLNLSNNNFTgSIPR------------- 136

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1720410054 189 nynqivyipeeiKFLKNLQQLFLVRNNIE-ELPEEICHLEKLRVLDIAGNVIQ-IFPAGFQNLRLTEF 254
Cdd:PLN00113  137 ------------GSIPNLETLDLSNNMLSgEIPNDIGSFSSLKVLDLGGNVLVgKIPNSLTNLTSLEF 192
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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