NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1720370170|ref|XP_030102346|]
View 

protein ABHD12B isoform X1 [Mus musculus]

Protein Classification

alpha/beta hydrolase( domain architecture ID 11437497)

alpha/beta hydrolase family protein catalyzes the hydrolysis of substrates with different chemical composition or physicochemical properties using a nucleophile-His-acid catalytic triad

Gene Ontology:  GO:0016787
PubMed:  12369917|19508187

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
FrsA COG1073
Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms]; ...
127-356 9.72e-31

Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms];


:

Pssm-ID: 440691 [Multi-domain]  Cd Length: 253  Bit Score: 117.32  E-value: 9.72e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 127 WYEASLSDGNPIIIYLHGSGINRAfcGRIKLTQVLSDGGFHVLSVDYRGFGDS--TGTTTEEGLTTDIICVYEWTKARSG 204
Cdd:COG1073    28 YLPAGASKKYPAVVVAHGNGGVKE--QRALYAQRLAELGFNVLAFDYRGYGESegEPREEGSPERRDARAAVDYLRTLPG 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 205 --RTPVCLWGHSLGTGVATNAARVLEakgcPVDAIILEAPFTNIWAA---------TINFPLVKMywkLPGclRTFVDAL 273
Cdd:COG1073   106 vdPERIGLLGISLGGGYALNAAATDP----RVKAVILDSPFTSLEDLaaqrakearGAYLPGVPY---LPN--VRLASLL 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 274 KEEkivFPNDENVKFLSSPLLILHGEDDRTVPLEFGKQLYEIARSayrNKERVkmVVfpPGFHHDYLFKSPML--LSTVR 351
Cdd:COG1073   177 NDE---FDPLAKIEKISRPLLFIHGEKDEAVPFYMSEDLYEAAAE---PKELL--IV--PGAGHVDLYDRPEEeyFDKLA 246

                  ....*
gi 1720370170 352 DFLSE 356
Cdd:COG1073   247 EFFKK 251
 
Name Accession Description Interval E-value
FrsA COG1073
Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms]; ...
127-356 9.72e-31

Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms];


Pssm-ID: 440691 [Multi-domain]  Cd Length: 253  Bit Score: 117.32  E-value: 9.72e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 127 WYEASLSDGNPIIIYLHGSGINRAfcGRIKLTQVLSDGGFHVLSVDYRGFGDS--TGTTTEEGLTTDIICVYEWTKARSG 204
Cdd:COG1073    28 YLPAGASKKYPAVVVAHGNGGVKE--QRALYAQRLAELGFNVLAFDYRGYGESegEPREEGSPERRDARAAVDYLRTLPG 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 205 --RTPVCLWGHSLGTGVATNAARVLEakgcPVDAIILEAPFTNIWAA---------TINFPLVKMywkLPGclRTFVDAL 273
Cdd:COG1073   106 vdPERIGLLGISLGGGYALNAAATDP----RVKAVILDSPFTSLEDLaaqrakearGAYLPGVPY---LPN--VRLASLL 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 274 KEEkivFPNDENVKFLSSPLLILHGEDDRTVPLEFGKQLYEIARSayrNKERVkmVVfpPGFHHDYLFKSPML--LSTVR 351
Cdd:COG1073   177 NDE---FDPLAKIEKISRPLLFIHGEKDEAVPFYMSEDLYEAAAE---PKELL--IV--PGAGHVDLYDRPEEeyFDKLA 246

                  ....*
gi 1720370170 352 DFLSE 356
Cdd:COG1073   247 EFFKK 251
Hydrolase_4 pfam12146
Serine aminopeptidase, S33; This domain is found in bacteria and eukaryotes and is ...
152-336 5.61e-16

Serine aminopeptidase, S33; This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.


Pssm-ID: 463473 [Multi-domain]  Cd Length: 238  Bit Score: 76.48  E-value: 5.61e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 152 CGRI-KLTQVLSDGGFHVLSVDYRGFGDST----GTTTEEGLTTDIICVYEWTKARSGRTPVCLWGHSLGTGVATNAArv 226
Cdd:pfam12146  17 SGRYaHLADALAAQGFAVYAYDHRGHGRSDgkrgHVPSFDDYVDDLDTFVDKIREEHPGLPLFLLGHSMGGLIAALYA-- 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 227 LEAKGcPVDAIILEAPFTNIWAATINFPLVKMYWKLPGCLRT-----------------FVDALKEEKIV-------FPN 282
Cdd:pfam12146  95 LRYPD-KVDGLILSAPALKIKPYLAPPILKLLAKLLGKLFPRlrvpnnllpdslsrdpeVVAAYAADPLVhggisarTLY 173
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720370170 283 D---------ENVKFLSSPLLILHGEDDRTVPLEFGKQLYEIARSAyrnkeRVKMVVFPPGFH 336
Cdd:pfam12146 174 ElldagerllRRAAAITVPLLLLHGGADRVVDPAGSREFYERAGST-----DKTLKLYPGLYH 231
hydr2_PEP TIGR03101
exosortase A system-associated hydrolase 2; This group of proteins are members of the alpha ...
96-245 1.52e-06

exosortase A system-associated hydrolase 2; This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.


Pssm-ID: 274428  Cd Length: 266  Bit Score: 49.05  E-value: 1.52e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170  96 FFLKPEPKVLLGIWHTVPSyrgeeakgkcrcwyeaslSDGNPIIIYLH--GSGINRAFCGRIKLTQVLSDGGFHVLSVDY 173
Cdd:TIGR03101   3 FFLDAPHGFRFCLYHPPVA------------------VGPRGVVIYLPpfAEEMNKSRRMVALQARAFAAGGFGVLQIDL 64
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720370170 174 RGFGDST---GTTTEEGLTTDIICVYEWTKARsGRTPVCLWGHSLGTGVATNAARVLEAKgcpVDAIILEAPFTN 245
Cdd:TIGR03101  65 YGCGDSAgdfAAARWDVWKEDVAAAYRWLIEQ-GHPPVTLWGLRLGALLALDAANPLAAK---CNRLVLWQPVVS 135
PLN02385 PLN02385
hydrolase; alpha/beta fold family protein
266-336 4.30e-03

hydrolase; alpha/beta fold family protein


Pssm-ID: 215216 [Multi-domain]  Cd Length: 349  Bit Score: 38.58  E-value: 4.30e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720370170 266 LRTFVDALKEEKIVfpnDENVKFLSSPLLILHGEDDRTVPLEFGKQLYEIARSAYRnkervKMVVFPPGFH 336
Cdd:PLN02385  258 LRTAVELLRTTQEI---EMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDK-----KLKLYEDAYH 320
 
Name Accession Description Interval E-value
FrsA COG1073
Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms]; ...
127-356 9.72e-31

Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms];


Pssm-ID: 440691 [Multi-domain]  Cd Length: 253  Bit Score: 117.32  E-value: 9.72e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 127 WYEASLSDGNPIIIYLHGSGINRAfcGRIKLTQVLSDGGFHVLSVDYRGFGDS--TGTTTEEGLTTDIICVYEWTKARSG 204
Cdd:COG1073    28 YLPAGASKKYPAVVVAHGNGGVKE--QRALYAQRLAELGFNVLAFDYRGYGESegEPREEGSPERRDARAAVDYLRTLPG 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 205 --RTPVCLWGHSLGTGVATNAARVLEakgcPVDAIILEAPFTNIWAA---------TINFPLVKMywkLPGclRTFVDAL 273
Cdd:COG1073   106 vdPERIGLLGISLGGGYALNAAATDP----RVKAVILDSPFTSLEDLaaqrakearGAYLPGVPY---LPN--VRLASLL 176
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 274 KEEkivFPNDENVKFLSSPLLILHGEDDRTVPLEFGKQLYEIARSayrNKERVkmVVfpPGFHHDYLFKSPML--LSTVR 351
Cdd:COG1073   177 NDE---FDPLAKIEKISRPLLFIHGEKDEAVPFYMSEDLYEAAAE---PKELL--IV--PGAGHVDLYDRPEEeyFDKLA 246

                  ....*
gi 1720370170 352 DFLSE 356
Cdd:COG1073   247 EFFKK 251
DAP2 COG1506
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
111-356 3.66e-27

Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];


Pssm-ID: 441115 [Multi-domain]  Cd Length: 234  Bit Score: 107.02  E-value: 3.66e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 111 TVPSYRGEEAKGKcrcWYEASLSDGNPIIIYLHGSGINRAFcGRIKLTQVLSDGGFHVLSVDYRGFGDSTGTTTEEGLTt 190
Cdd:COG1506     1 TFKSADGTTLPGW---LYLPADGKKYPVVVYVHGGPGSRDD-SFLPLAQALASRGYAVLAPDYRGYGESAGDWGGDEVD- 75
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 191 DIICVYEWTKARSG--RTPVCLWGHSLGTGVATNAArvLEAKGcPVDAIILEAPFTNIWAATINF-PLVKMYWKLPgclR 267
Cdd:COG1506    76 DVLAAIDYLAARPYvdPDRIGIYGHSYGGYMALLAA--ARHPD-RFKAAVALAGVSDLRSYYGTTrEYTERLMGGP---W 149
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 268 TFVDALKEekivFPNDENVKFLSSPLLILHGEDDRTVPLEFGKQLYEIARsayRNKERVKMVVFPPGFHHDYLFKSPMLL 347
Cdd:COG1506   150 EDPEAYAA----RSPLAYADKLKTPLLLIHGEADDRVPPEQAERLYEALK---KAGKPVELLVYPGEGHGFSGAGAPDYL 222

                  ....*....
gi 1720370170 348 STVRDFLSE 356
Cdd:COG1506   223 ERILDFLDR 231
PldB COG2267
Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];
137-356 7.03e-21

Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];


Pssm-ID: 441868 [Multi-domain]  Cd Length: 221  Bit Score: 89.68  E-value: 7.03e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 137 PIIIYLHGSGINRAFCGRikLTQVLSDGGFHVLSVDYRGFGDSTGTTTEEGLTTDII----CVYEWTKARSGRtPVCLWG 212
Cdd:COG2267    29 GTVVLVHGLGEHSGRYAE--LAEALAAAGYAVLAFDLRGHGRSDGPRGHVDSFDDYVddlrAALDALRARPGL-PVVLLG 105
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 213 HSLGTGVAtnaARVLEAKGCPVDAIILEAPftniwaATINFPLVKMYWKLPGCLRTFvdalkeekivfpndENVKFLSSP 292
Cdd:COG2267   106 HSMGGLIA---LLYAARYPDRVAGLVLLAP------AYRADPLLGPSARWLRALRLA--------------EALARIDVP 162
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1720370170 293 LLILHGEDDRTVPLEFGKQLYEiarsayRNKERVKMVVFpPGFHHDYLFKS--PMLLSTVRDFLSE 356
Cdd:COG2267   163 VLVLHGGADRVVPPEAARRLAA------RLSPDVELVLL-PGARHELLNEParEEVLAAILAWLER 221
Hydrolase_4 pfam12146
Serine aminopeptidase, S33; This domain is found in bacteria and eukaryotes and is ...
152-336 5.61e-16

Serine aminopeptidase, S33; This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. It is found in association with pfam00561. The majority of the members in this family carry the exopeptidase active-site residues of Ser-122, Asp-239 and His-269 as in UniProtKB:Q7ZWC2.


Pssm-ID: 463473 [Multi-domain]  Cd Length: 238  Bit Score: 76.48  E-value: 5.61e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 152 CGRI-KLTQVLSDGGFHVLSVDYRGFGDST----GTTTEEGLTTDIICVYEWTKARSGRTPVCLWGHSLGTGVATNAArv 226
Cdd:pfam12146  17 SGRYaHLADALAAQGFAVYAYDHRGHGRSDgkrgHVPSFDDYVDDLDTFVDKIREEHPGLPLFLLGHSMGGLIAALYA-- 94
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 227 LEAKGcPVDAIILEAPFTNIWAATINFPLVKMYWKLPGCLRT-----------------FVDALKEEKIV-------FPN 282
Cdd:pfam12146  95 LRYPD-KVDGLILSAPALKIKPYLAPPILKLLAKLLGKLFPRlrvpnnllpdslsrdpeVVAAYAADPLVhggisarTLY 173
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1720370170 283 D---------ENVKFLSSPLLILHGEDDRTVPLEFGKQLYEIARSAyrnkeRVKMVVFPPGFH 336
Cdd:pfam12146 174 ElldagerllRRAAAITVPLLLLHGGADRVVDPAGSREFYERAGST-----DKTLKLYPGLYH 231
MenH COG0596
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, ...
125-356 2.07e-13

2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold is part of the Pathway/BioSystem: Menaquinone biosynthesis


Pssm-ID: 440361 [Multi-domain]  Cd Length: 221  Bit Score: 68.49  E-value: 2.07e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 125 RCWYEASLSDGnPIIIYLHGSGINRAFCGRikLTQVLSDGgFHVLSVDYRGFGDSTGTTTEEGLTTDIICVYEWTKARsG 204
Cdd:COG0596    13 RLHYREAGPDG-PPVVLLHGLPGSSYEWRP--LIPALAAG-YRVIAPDLRGHGRSDKPAGGYTLDDLADDLAALLDAL-G 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 205 RTPVCLWGHSLGTGVATNAARVLEAKgcpVDAIILEAPFTNIWAATINFPlvkmyWKLPGCLRTFVDALKEekivFPNDE 284
Cdd:COG0596    88 LERVVLVGHSMGGMVALELAARHPER---VAGLVLVDEVLAALAEPLRRP-----GLAPEALAALLRALAR----TDLRE 155
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720370170 285 NVKFLSSPLLILHGEDDRTVPLEFGKQLYEIARSAyrnkervKMVVFPPGFHHDYLFKSPMLLSTVRDFLSE 356
Cdd:COG0596   156 RLARITVPTLVIWGEKDPIVPPALARRLAELLPNA-------ELVVLPGAGHFPPLEQPEAFAAALRDFLAR 220
Abhydrolase_1 pfam00561
alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.
137-342 4.47e-10

alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.


Pssm-ID: 395444 [Multi-domain]  Cd Length: 245  Bit Score: 59.44  E-value: 4.47e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 137 PIIIYLHGSGINRAFCgrIKLTQVLSDGGFHVLSVDYRGFGDSTGTTTEEGLTTDIIC-VYEWTKARSGRTPVCLWGHSL 215
Cdd:pfam00561   1 PPVLLLHGLPGSSDLW--RKLAPALARDGFRVIALDLRGFGKSSRPKAQDDYRTDDLAeDLEYILEALGLEKVNLVGHSM 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 216 GTGVATNAARVLEAKgcpVDAIILEAP----------------------------FTNIWAAT-INFPL--VKMYWKLPG 264
Cdd:pfam00561  79 GGLIALAYAAKYPDR---VKALVLLGAldppheldeadrfilalfpgffdgfvadFAPNPLGRlVAKLLalLLLRLRLLK 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 265 CLRTFVDALKEEKI---------------VFPNDENVKFL---SSPLLILHGEDDRTVPLefgKQLYEIARSayrnKERV 326
Cdd:pfam00561 156 ALPLLNKRFPSGDYalakslvtgallfieTWSTELRAKFLgrlDEPTLIIWGDQDPLVPP---QALEKLAQL----FPNA 228
                         250
                  ....*....|....*.
gi 1720370170 327 KMVVFPPGFHHDYLFK 342
Cdd:pfam00561 229 RLVVIPDAGHFAFLEG 244
Abhydrolase_6 pfam12697
Alpha/beta hydrolase family; This family contains alpha/beta hydrolase enzymes of diverse ...
139-337 1.51e-09

Alpha/beta hydrolase family; This family contains alpha/beta hydrolase enzymes of diverse specificity.


Pssm-ID: 463673 [Multi-domain]  Cd Length: 211  Bit Score: 57.48  E-value: 1.51e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 139 IIYLHGSGINRAFCGRikltqvLSDGGFHVLSVDYRGFGDSTGTTTEEGLTTDIIcvyEWTKARSGRTPVCLWGHSLGTG 218
Cdd:pfam12697   1 VVLVHGAGLSAAPLAA------LLAAGVAVLAPDLPGHGSSSPPPLDLADLADLA---ALLDELGAARPVVLVGHSLGGA 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 219 VATNAARVLEAKGCPVDAIILEAPFTNI---WAATINFPLVKMYWKLPGCL-RTFVDALKEEKIV--------------- 279
Cdd:pfam12697  72 VALAAAAAALVVGVLVAPLAAPPGLLAAllaLLARLGAALAAPAWLAAESLaRGFLDDLPADAEWaaalarlaallaala 151
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1720370170 280 FPNDENVKFLSSPLLILHgEDDRTVPLEFGKQLyeiarsayRNKERVKMVVFPPGFHH 337
Cdd:pfam12697 152 LLPLAAWRDLPVPVLVLA-EEDRLVPELAQRLL--------AALAGARLVVLPGAGHL 200
Aes COG0657
Acetyl esterase/lipase [Lipid transport and metabolism];
137-359 2.70e-08

Acetyl esterase/lipase [Lipid transport and metabolism];


Pssm-ID: 440422 [Multi-domain]  Cd Length: 207  Bit Score: 53.34  E-value: 2.70e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 137 PIIIYLHGSG-------INRAFCGRIkltqvLSDGGFHVLSVDYR-----GFGDStgttteeglTTDIICVYEWTKARSG 204
Cdd:COG0657    14 PVVVYFHGGGwvsgskdTHDPLARRL-----AARAGAAVVSVDYRlapehPFPAA---------LEDAYAALRWLRANAA 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 205 R-----TPVCLWGHSLGTGVATNAARVLEAKGCP-VDAIILEAPFTNIWAAtinfPLvkmYWKLPGclrtfvdalkeeki 278
Cdd:COG0657    80 ElgidpDRIAVAGDSAGGHLAAALALRARDRGGPrPAAQVLIYPVLDLTAS----PL---RADLAG-------------- 138
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 279 vFPndenvkflssPLLILHGEDDRTVplEFGKQLYEIARSAyrnKERVKMVVFpPGFHHDYLFKSPM-----LLSTVRDF 353
Cdd:COG0657   139 -LP----------PTLIVTGEADPLV--DESEALAAALRAA---GVPVELHVY-PGGGHGFGLLAGLpearaALAEIAAF 201

                  ....*.
gi 1720370170 354 LSEQWA 359
Cdd:COG0657   202 LRRALA 207
YvaK COG1647
Esterase/lipase [Secondary metabolites biosynthesis, transport and catabolism];
132-336 2.24e-07

Esterase/lipase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 441253 [Multi-domain]  Cd Length: 246  Bit Score: 51.10  E-value: 2.24e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 132 LSDGNPIIIYLHGsginraFCG-----RiKLTQVLSDGGFHVLSVDYRGFGDSTGTTTEEGL---TTDIICVYEWTKARS 203
Cdd:COG1647    11 LEGGRKGVLLLHG------FTGspaemR-PLAEALAKAGYTVYAPRLPGHGTSPEDLLKTTWedwLEDVEEAYEILKAGY 83
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 204 GRtpVCLWGHSLGTGVATNAArvleAKGCPVDAIILEAPFTNI--------------------WAATINFPLVKMYW--K 261
Cdd:COG1647    84 DK--VIVIGLSMGGLLALLLA----ARYPDVAGLVLLSPALKIddpsapllpllkylarslrgIGSDIEDPEVAEYAydR 157
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1720370170 262 LP-GCLRTFVDALKEEKIVFPNdenvkfLSSPLLILHGEDDRTVPLEFGKQLYEIARSayrnkERVKMVVFPPGFH 336
Cdd:COG1647   158 TPlRALAELQRLIREVRRDLPK------ITAPTLIIQSRKDEVVPPESARYIYERLGS-----PDKELVWLEDSGH 222
COG2945 COG2945
Alpha/beta superfamily hydrolase [General function prediction only];
156-355 7.33e-07

Alpha/beta superfamily hydrolase [General function prediction only];


Pssm-ID: 442188 [Multi-domain]  Cd Length: 201  Bit Score: 49.01  E-value: 7.33e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 156 KLTQVLSDGGFHVLSVDYRGFGDStgttt-eeglTTDIICVYEWTKARSGRtPVCLWGHSLGTGVATNAARVLEakgcPV 234
Cdd:COG2945    46 TLARALVAAGFAVLRFNFRGVGRSegefdegrgeLDDAAAALDWLRAQNPL-PLWLAGFSFGAYVALQLAMRLP----EV 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 235 DAIILEAPFTNIWaatiNFPlvkmywKLPGClrtfvdalkeekivfpndenvkflSSPLLILHGEDDRTVPLEfgkQLYE 314
Cdd:COG2945   121 EGLILVAPPVNRY----DFS------FLAPC------------------------PAPTLVIHGEQDEVVPPA---EVLD 163
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1720370170 315 IARSAyrnKERVKMVVFPPGFH--HDYLfksPMLLSTVRDFLS 355
Cdd:COG2945   164 WARPL---SPPLPVVVVPGADHffHGKL---DELKELVARYLP 200
hydr2_PEP TIGR03101
exosortase A system-associated hydrolase 2; This group of proteins are members of the alpha ...
96-245 1.52e-06

exosortase A system-associated hydrolase 2; This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.


Pssm-ID: 274428  Cd Length: 266  Bit Score: 49.05  E-value: 1.52e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170  96 FFLKPEPKVLLGIWHTVPSyrgeeakgkcrcwyeaslSDGNPIIIYLH--GSGINRAFCGRIKLTQVLSDGGFHVLSVDY 173
Cdd:TIGR03101   3 FFLDAPHGFRFCLYHPPVA------------------VGPRGVVIYLPpfAEEMNKSRRMVALQARAFAAGGFGVLQIDL 64
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1720370170 174 RGFGDST---GTTTEEGLTTDIICVYEWTKARsGRTPVCLWGHSLGTGVATNAARVLEAKgcpVDAIILEAPFTN 245
Cdd:TIGR03101  65 YGCGDSAgdfAAARWDVWKEDVAAAYRWLIEQ-GHPPVTLWGLRLGALLALDAANPLAAK---CNRLVLWQPVVS 135
DLH COG0412
Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism];
137-339 5.90e-06

Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440181 [Multi-domain]  Cd Length: 226  Bit Score: 46.88  E-value: 5.90e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 137 PIIIYLHGS-GIN---RAFCGRikltqvLSDGGFHVLSVDYRGFGDSTGTTTEEGLTT----------DIICVYEWTKAR 202
Cdd:COG0412    30 PGVVVLHEIfGLNphiRDVARR------LAAAGYVVLAPDLYGRGGPGDDPDEARALMgaldpellaaDLRAALDWLKAQ 103
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 203 SGRTP--VCLWGHSLGTGVATNAARvleakgcpvdaiiLEAPFtniwAATINFplvkmYwklPGCLRTFVDALKEEkivf 280
Cdd:COG0412   104 PEVDAgrVGVVGFCFGGGLALLAAA-------------RGPDL----AAAVSF-----Y---GGLPADDLLDLAAR---- 154
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1720370170 281 pndenvkfLSSPLLILHGEDDRTVPLEFGKQLYEIARSAyrnKERVKMVVFPP---GFHHDY 339
Cdd:COG0412   155 --------IKAPVLLLYGEKDPLVPPEQVAALEAALAAA---GVDVELHVYPGaghGFTNPG 205
COG4757 COG4757
Predicted alpha/beta hydrolase [General function prediction only];
161-226 3.83e-04

Predicted alpha/beta hydrolase [General function prediction only];


Pssm-ID: 443790 [Multi-domain]  Cd Length: 289  Bit Score: 41.79  E-value: 3.83e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1720370170 161 LSDGGFHVLSVDYRGFGDSTGTTTEEGL-------TTDIICVYEWTKARSGRTPVCLWGHSLG---TGVATNAARV 226
Cdd:COG4757    55 LAERGFAVLTYDYRGIGLSRPGSLRGFDagyrdwgELDLPAVLDALRARFPGLPLLLVGHSLGgqlLGLAPNAERV 130
Thioesterase pfam00975
Thioesterase domain; Peptide synthetases are involved in the non-ribosomal synthesis of ...
200-354 4.29e-03

Thioesterase domain; Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.


Pssm-ID: 395776 [Multi-domain]  Cd Length: 223  Bit Score: 38.14  E-value: 4.29e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 200 KARSGRTPVCLWGHSLGTGVATNAARVLEAKGCPVDAIILEApftnIWAATINFPLVKMYWKLPG--------------- 264
Cdd:pfam00975  59 RQIQPEGPYALFGHSMGGMLAFEVARRLERQGEAVRSLFLSD----ASAPHTVRYEASRAPDDDEvvaeftdeggtpeel 134
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720370170 265 -----CLRTFVDALKEEKIVFPNDENVKFLSSPLLILHGEDDRTVPLEfgkQLYEIARSAYRNKERVKMVvfpPGFHHDY 339
Cdd:pfam00975 135 ledeeLLSMLLPALRADYRALESYSCPPLDAQSATLFYGSDDPLHDAD---DLAEWVRDHTPGEFDVHVF---DGDHFYL 208
                         170
                  ....*....|....*
gi 1720370170 340 LFKSPMLLSTVRDFL 354
Cdd:pfam00975 209 IEHLEAVLEIIEAKL 223
PLN02385 PLN02385
hydrolase; alpha/beta fold family protein
266-336 4.30e-03

hydrolase; alpha/beta fold family protein


Pssm-ID: 215216 [Multi-domain]  Cd Length: 349  Bit Score: 38.58  E-value: 4.30e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720370170 266 LRTFVDALKEEKIVfpnDENVKFLSSPLLILHGEDDRTVPLEFGKQLYEIARSAYRnkervKMVVFPPGFH 336
Cdd:PLN02385  258 LRTAVELLRTTQEI---EMQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDK-----KLKLYEDAYH 320
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH