|
Name |
Accession |
Description |
Interval |
E-value |
| TSPN |
smart00210 |
Thrombospondin N-terminal -like domains; Heparin-binding and cell adhesion domain of ... |
50-231 |
5.18e-59 |
|
Thrombospondin N-terminal -like domains; Heparin-binding and cell adhesion domain of thrombospondin :
Pssm-ID: 214560 Cd Length: 184 Bit Score: 201.05 E-value: 5.18e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 50 GFNLIHRLSLM-KTSAIKKIRNPKGP-LILRLG-AAPVTQPTRRVFPRGLPEEFALVLTLLLKKhthQKTWYLFQVTDAN 126
Cdd:smart00210 1 GQDLLQVFDLPsLSFAIRQVVGPEPGsPAYRLGdPALVPQPTRDLFPSGLPEDFSLLTTFRQTP---KSRGVLFAIYDAQ 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 127 GYPQISLEVNSQERSLELRAQGQDGDFVSCIFPVPQLFDLRWHKLMLSVAGRVASVHVDCSSASSQPLGPRR--PMRPVG 204
Cdd:smart00210 78 NVRQFGLEVDGRANTLLLRYQGVDGKQHTVSFRNLPLADGQWHKLALSVSGSSATLYVDCNEIDSRPLDRPGqpPIDTDG 157
|
170 180
....*....|....*....|....*..
gi 767902465 205 HVFLGLDAEQGKPVSFDLQQVHIYCDP 231
Cdd:smart00210 158 IEVRGAQAADRKPFQGDLQQLKIVCDP 184
|
|
| gly_rich_SclB super family |
cl45768 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
512-802 |
4.29e-17 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats. The actual alignment was detected with superfamily member NF038329:
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 85.73 E-value: 4.29e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 512 TLPEGFQNFVGlpgkPGPKGEPGdPVPARGDPGIQGIKGEKGEPclscssvvgaqhlvsstgasgdvgspgfGLPGLPGR 591
Cdd:NF038329 105 ELDEGLQQLKG----DGEKGEPG-PAGPAGPAGEQGPRGDRGET----------------------------GPAGPAGP 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 592 AGVPGLKGEKGNFGEAGPAGSPGPPGPVGPAGIKGAKGEPCEPCPALSNLQDGDVRVVALPGPSGEKGEPGPPGFGLPGK 671
Cdd:NF038329 152 PGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGPRGETGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAG 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 672 QGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVQGPAGPKGEKGDgctacpslqgtvTDMAGRPGQPGPKGEQG 751
Cdd:NF038329 232 DGQQGPDGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAGPDGPDGKDGERGP------------VGPAGKDGQNGKDGLPG 299
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 767902465 752 PEgvGRPGKPGQPGLPGVQGPPGLKGVQGEPGPPGRGVQGPQGEPGAPGLP 802
Cdd:NF038329 300 KD--GKDGQNGKDGLPGKDGKDGQPGKDGLPGKDGKDGQPGKPAPKTPEVP 348
|
|
| gly_rich_SclB super family |
cl45768 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
739-875 |
7.84e-15 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats. The actual alignment was detected with superfamily member NF038329:
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 78.79 E-value: 7.84e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 739 GRPGQPGPKGEQGPEG-VGRPGKPGQPGLPGVQGPPGLKGVQGEPGPpgrgvQGPQGEPGAPGLPGIQGLPGPRGPPGPT 817
Cdd:NF038329 117 GEKGEPGPAGPAGPAGeQGPRGDRGETGPAGPAGPPGPQGERGEKGP-----AGPQGEAGPQGPAGKDGEAGAKGPAGEK 191
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 767902465 818 GEKGAQGSPGVKGATGPVGPPGASVS---------------------GPPGRDGQQGQTGLRGTPGEKGPRGEKGEPGE 875
Cdd:NF038329 192 GPQGPRGETGPAGEQGPAGPAGPDGEagpagedgpagpagdgqqgpdGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAGP 270
|
|
| gly_rich_SclB super family |
cl45768 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
337-596 |
2.27e-13 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats. The actual alignment was detected with superfamily member NF038329:
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 74.17 E-value: 2.27e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 337 GGKGERGLPGPPGSKGEKGARGNDcvrispdaplqcaeGPKGEKGESGALGPSGLPGSTGEKGQKGEKGDGGIKGVPGKP 416
Cdd:NF038329 117 GEKGEPGPAGPAGPAGEQGPRGDR--------------GETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEA 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 417 GRDGRPGEICVIGPKGQKGDPGFVGPEGLAGEPGPPGLPGPPGIGLPGTPGDPGGPPGPkgdkgssGIPGKEGPGGKPGK 496
Cdd:NF038329 183 GAKGPAGEKGPQGPRGETGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAGDGQQGPDGDP-------GPTGEDGPQGPDGP 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 497 PGVKGEKGDPCEVCPTLPEGFQNFVGLPGKPGPKGEPGDpvpaRGDPGIQGIKGEKGEPCLScssvvgaqhlvsstGASG 576
Cdd:NF038329 256 AGKDGPRGDRGEAGPDGPDGKDGERGPVGPAGKDGQNGK----DGLPGKDGKDGQNGKDGLP--------------GKDG 317
|
250 260
....*....|....*....|.
gi 767902465 577 DVGSPGF-GLPGLPGRAGVPG 596
Cdd:NF038329 318 KDGQPGKdGLPGKDGKDGQPG 338
|
|
| gly_rich_SclB super family |
cl45768 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1143-1386 |
4.34e-13 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats. The actual alignment was detected with superfamily member NF038329:
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 73.40 E-value: 4.34e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1143 GSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPGIQGPAGLDGLDGKDGKPGLRGDPGPAGPPGLMGPPGFKGKTGHPGL 1222
Cdd:NF038329 120 GEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGPRGE 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1223 PGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGRPGppghvgppgppgqpgpagisaVGLKGDRGATGERGLAGLPGQPGP 1302
Cdd:NF038329 200 TGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAGDGQ---------------------QGPDGDPGPTGEDGPQGPDGPAGK 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1303 PGHPGPPGEPGTDGAAGKEGPPGKQGFYGPPGPKGDPGAAGQKGQAGEKGRAGMPGGPGKSGSMGPVGPPGPAGERGHPG 1382
Cdd:NF038329 259 DGPRGDRGEAGPDGPDGKDGERGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQPGKDGLPGKDGKDGQPG 338
|
....
gi 767902465 1383 APGP 1386
Cdd:NF038329 339 KPAP 342
|
|
| gly_rich_SclB super family |
cl45768 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1280-1494 |
3.19e-11 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats. The actual alignment was detected with superfamily member NF038329:
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 67.62 E-value: 3.19e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1280 GLKGDRGATGERGLAGLPGQPGPPGHPGPPGEPGTDGAAGKEGPPGKQGfygppgpkgDPGAAGQKGQAGEKGRAGMPGG 1359
Cdd:NF038329 117 GEKGEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAG---------PQGEAGPQGPAGKDGEAGAKGP 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1360 PGKSGSMGPVGPPGPAGERGHPGAPGPSGSPGLPGVPGSMGDMVNYDEIKRFIRQEIikmfdermayytsrmqfpmemaa 1439
Cdd:NF038329 188 AGEKGPQGPRGETGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAGDGQQGPDGDPGPT----------------------- 244
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 767902465 1440 apGRPGPPGKDGAPGRPGAPGSPGLPGQIGREGRQGLPGVRGLPGTKGEKGDIGI 1494
Cdd:NF038329 245 --GEDGPQGPDGPAGKDGPRGDRGEAGPDGPDGKDGERGPVGPAGKDGQNGKDGL 297
|
|
| gly_rich_SclB super family |
cl45768 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
991-1248 |
1.63e-09 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats. The actual alignment was detected with superfamily member NF038329:
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 62.23 E-value: 1.63e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 991 GDNSEGDPGCVGSPGLPGPPGLPGQRGEEGPPGMRGSPGPPGPiglQGERGLTGLTGDKGEPGPPGQPGYPGATGPPGLP 1070
Cdd:NF038329 115 GDGEKGEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGE---RGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEK 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1071 GIKGERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPRGE--RGPQGNSGEKGDQGFQGQPGFPGPPGPPGFPGKVGSPGPP 1148
Cdd:NF038329 192 GPQGPRGETGPAGEQGPAGPAGPDGEAGPAGEDGPAGPagDGQQGPDGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAGPD 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1149 GPQAEKGSEGIRGPSGLpgspgppgppgiqgpaglDGLDGKDGKPGlrgdpgpagppglmgPPGFKGKTGHPGLPGPKGD 1228
Cdd:NF038329 272 GPDGKDGERGPVGPAGK------------------DGQNGKDGLPG---------------KDGKDGQNGKDGLPGKDGK 318
|
250 260
....*....|....*....|
gi 767902465 1229 CGKPGPPGSTGRPGAEGEPG 1248
Cdd:NF038329 319 DGQPGKDGLPGKDGKDGQPG 338
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| TSPN |
smart00210 |
Thrombospondin N-terminal -like domains; Heparin-binding and cell adhesion domain of ... |
50-231 |
5.18e-59 |
|
Thrombospondin N-terminal -like domains; Heparin-binding and cell adhesion domain of thrombospondin
Pssm-ID: 214560 Cd Length: 184 Bit Score: 201.05 E-value: 5.18e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 50 GFNLIHRLSLM-KTSAIKKIRNPKGP-LILRLG-AAPVTQPTRRVFPRGLPEEFALVLTLLLKKhthQKTWYLFQVTDAN 126
Cdd:smart00210 1 GQDLLQVFDLPsLSFAIRQVVGPEPGsPAYRLGdPALVPQPTRDLFPSGLPEDFSLLTTFRQTP---KSRGVLFAIYDAQ 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 127 GYPQISLEVNSQERSLELRAQGQDGDFVSCIFPVPQLFDLRWHKLMLSVAGRVASVHVDCSSASSQPLGPRR--PMRPVG 204
Cdd:smart00210 78 NVRQFGLEVDGRANTLLLRYQGVDGKQHTVSFRNLPLADGQWHKLALSVSGSSATLYVDCNEIDSRPLDRPGqpPIDTDG 157
|
170 180
....*....|....*....|....*..
gi 767902465 205 HVFLGLDAEQGKPVSFDLQQVHIYCDP 231
Cdd:smart00210 158 IEVRGAQAADRKPFQGDLQQLKIVCDP 184
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
512-802 |
4.29e-17 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 85.73 E-value: 4.29e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 512 TLPEGFQNFVGlpgkPGPKGEPGdPVPARGDPGIQGIKGEKGEPclscssvvgaqhlvsstgasgdvgspgfGLPGLPGR 591
Cdd:NF038329 105 ELDEGLQQLKG----DGEKGEPG-PAGPAGPAGEQGPRGDRGET----------------------------GPAGPAGP 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 592 AGVPGLKGEKGNFGEAGPAGSPGPPGPVGPAGIKGAKGEPCEPCPALSNLQDGDVRVVALPGPSGEKGEPGPPGFGLPGK 671
Cdd:NF038329 152 PGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGPRGETGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAG 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 672 QGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVQGPAGPKGEKGDgctacpslqgtvTDMAGRPGQPGPKGEQG 751
Cdd:NF038329 232 DGQQGPDGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAGPDGPDGKDGERGP------------VGPAGKDGQNGKDGLPG 299
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 767902465 752 PEgvGRPGKPGQPGLPGVQGPPGLKGVQGEPGPPGRGVQGPQGEPGAPGLP 802
Cdd:NF038329 300 KD--GKDGQNGKDGLPGKDGKDGQPGKDGLPGKDGKDGQPGKPAPKTPEVP 348
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
739-875 |
7.84e-15 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 78.79 E-value: 7.84e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 739 GRPGQPGPKGEQGPEG-VGRPGKPGQPGLPGVQGPPGLKGVQGEPGPpgrgvQGPQGEPGAPGLPGIQGLPGPRGPPGPT 817
Cdd:NF038329 117 GEKGEPGPAGPAGPAGeQGPRGDRGETGPAGPAGPPGPQGERGEKGP-----AGPQGEAGPQGPAGKDGEAGAKGPAGEK 191
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 767902465 818 GEKGAQGSPGVKGATGPVGPPGASVS---------------------GPPGRDGQQGQTGLRGTPGEKGPRGEKGEPGE 875
Cdd:NF038329 192 GPQGPRGETGPAGEQGPAGPAGPDGEagpagedgpagpagdgqqgpdGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAGP 270
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
337-596 |
2.27e-13 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 74.17 E-value: 2.27e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 337 GGKGERGLPGPPGSKGEKGARGNDcvrispdaplqcaeGPKGEKGESGALGPSGLPGSTGEKGQKGEKGDGGIKGVPGKP 416
Cdd:NF038329 117 GEKGEPGPAGPAGPAGEQGPRGDR--------------GETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEA 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 417 GRDGRPGEICVIGPKGQKGDPGFVGPEGLAGEPGPPGLPGPPGIGLPGTPGDPGGPPGPkgdkgssGIPGKEGPGGKPGK 496
Cdd:NF038329 183 GAKGPAGEKGPQGPRGETGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAGDGQQGPDGDP-------GPTGEDGPQGPDGP 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 497 PGVKGEKGDPCEVCPTLPEGFQNFVGLPGKPGPKGEPGDpvpaRGDPGIQGIKGEKGEPCLScssvvgaqhlvsstGASG 576
Cdd:NF038329 256 AGKDGPRGDRGEAGPDGPDGKDGERGPVGPAGKDGQNGK----DGLPGKDGKDGQNGKDGLP--------------GKDG 317
|
250 260
....*....|....*....|.
gi 767902465 577 DVGSPGF-GLPGLPGRAGVPG 596
Cdd:NF038329 318 KDGQPGKdGLPGKDGKDGQPG 338
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1143-1386 |
4.34e-13 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 73.40 E-value: 4.34e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1143 GSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPGIQGPAGLDGLDGKDGKPGLRGDPGPAGPPGLMGPPGFKGKTGHPGL 1222
Cdd:NF038329 120 GEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGPRGE 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1223 PGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGRPGppghvgppgppgqpgpagisaVGLKGDRGATGERGLAGLPGQPGP 1302
Cdd:NF038329 200 TGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAGDGQ---------------------QGPDGDPGPTGEDGPQGPDGPAGK 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1303 PGHPGPPGEPGTDGAAGKEGPPGKQGFYGPPGPKGDPGAAGQKGQAGEKGRAGMPGGPGKSGSMGPVGPPGPAGERGHPG 1382
Cdd:NF038329 259 DGPRGDRGEAGPDGPDGKDGERGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQPGKDGLPGKDGKDGQPG 338
|
....
gi 767902465 1383 APGP 1386
Cdd:NF038329 339 KPAP 342
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1037-1248 |
1.45e-12 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 71.86 E-value: 1.45e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1037 QGERGLTGLTGDKGEPGPPGQPGYPGATGPPGLPGIKGERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPRGERGPQGNSG 1116
Cdd:NF038329 119 KGEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGPRG 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1117 EKGDQGFQGQPGFPGPPGPPGFPGKVGSPGPP-----GPQAEKGSEGIRGPSGLPGSPGPPGPPGIQGPAGLDGLDGKDG 1191
Cdd:NF038329 199 ETGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAgdgqqGPDGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAGPDGPDGKDG 278
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 767902465 1192 KPGLRGDPGPAGPPGLMGPPGFKGKTGHPGLPGPKGDCGKPGPPGSTGRPGAEGEPG 1248
Cdd:NF038329 279 ERGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQPGKDGLPGKDGKDG 335
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1214-1484 |
1.83e-11 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 68.39 E-value: 1.83e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1214 KGKTGHPGLPGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGRPGPPGHVgppgppgqpgpagisavGLKGDRGATGERGL 1293
Cdd:NF038329 134 QGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEA-----------------GAKGPAGEKGPQGP 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1294 AGLPGQPGPPGHPGPPGEPGTDGAAGKEGPPGKQGfygppgpkgdpgaAGQKGQAGEKGRAGMPGGPGKSGSMGPVGPPG 1373
Cdd:NF038329 197 RGETGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAG-------------DGQQGPDGDPGPTGEDGPQGPDGPAGKDGPRG 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1374 PAGERGHPGAPGPSGSPGLPGVPGSMGDmvnydeikrfirqeiikmfdermayytsrmqfpmemAAAPGRPGPPGKDGAP 1453
Cdd:NF038329 264 DRGEAGPDGPDGKDGERGPVGPAGKDGQ------------------------------------NGKDGLPGKDGKDGQN 307
|
250 260 270
....*....|....*....|....*....|.
gi 767902465 1454 GRPGAPGSPGLPGQIGREGRQGLPGVRGLPG 1484
Cdd:NF038329 308 GKDGLPGKDGKDGQPGKDGLPGKDGKDGQPG 338
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1280-1494 |
3.19e-11 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 67.62 E-value: 3.19e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1280 GLKGDRGATGERGLAGLPGQPGPPGHPGPPGEPGTDGAAGKEGPPGKQGfygppgpkgDPGAAGQKGQAGEKGRAGMPGG 1359
Cdd:NF038329 117 GEKGEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAG---------PQGEAGPQGPAGKDGEAGAKGP 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1360 PGKSGSMGPVGPPGPAGERGHPGAPGPSGSPGLPGVPGSMGDMVNYDEIKRFIRQEIikmfdermayytsrmqfpmemaa 1439
Cdd:NF038329 188 AGEKGPQGPRGETGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAGDGQQGPDGDPGPT----------------------- 244
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 767902465 1440 apGRPGPPGKDGAPGRPGAPGSPGLPGQIGREGRQGLPGVRGLPGTKGEKGDIGI 1494
Cdd:NF038329 245 --GEDGPQGPDGPAGKDGPRGDRGEAGPDGPDGKDGERGPVGPAGKDGQNGKDGL 297
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
374-717 |
1.24e-10 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 65.70 E-value: 1.24e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 374 EGPKGEKGESGALGPSGLPGSTGEKGQKGEKGDGGIKGVPGKPGRDGRPGEICVIGPKGQKGDPGFVGPEGLAGEPgppg 453
Cdd:NF038329 116 DGEKGEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEK---- 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 454 lpgppgiglpgtpgdpggppgpkgdkgssgipgkegpggkpgkpgvkGEKGDPCEVCPTLPEGFQNFVGLPGKPGPKGEP 533
Cdd:NF038329 192 -----------------------------------------------GPQGPRGETGPAGEQGPAGPAGPDGEAGPAGED 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 534 GDPVPA-RGDPGIQGIKGEKGEpclscssvvgaqhlvssTGASGDVgspgfglpGLPGRAGVPGLKGEKGNFGEagpags 612
Cdd:NF038329 225 GPAGPAgDGQQGPDGDPGPTGE-----------------DGPQGPD--------GPAGKDGPRGDRGEAGPDGP------ 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 613 pgppgpvgpagiKGAKGEPCEPCPALSNLQDGDvrvVALPGPSGekgepgppgfglpgKQGKAGERGLKGQKGDAGNPGD 692
Cdd:NF038329 274 ------------DGKDGERGPVGPAGKDGQNGK---DGLPGKDG--------------KDGQNGKDGLPGKDGKDGQPGK 324
|
330 340
....*....|....*....|....*
gi 767902465 693 PGTPGTTGRPGLSGEPGVQGPAGPK 717
Cdd:NF038329 325 DGLPGKDGKDGQPGKPAPKTPEVPQ 349
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1063-1249 |
1.58e-10 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 65.31 E-value: 1.58e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1063 ATGPPGLPGIKGERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPRGERGPQGNSGEKGDQGFQGQPGFPGPPGPPGFPGKV 1142
Cdd:NF038329 124 PAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGPRGETGPA 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1143 GSPGPPGPQAEKGSEGIRGPSGLPGSPGPPG--PPGIQGPAGLDGLDGKDGKPGLRGDPGPAGPPGLMGPPGFKGKTGHP 1220
Cdd:NF038329 204 GEQGPAGPAGPDGEAGPAGEDGPAGPAGDGQqgPDGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAGPDGPDGKDGERGPV 283
|
170 180
....*....|....*....|....*....
gi 767902465 1221 GLPGPKGDCGKPGPPGSTGRPGAEGEPGA 1249
Cdd:NF038329 284 GPAGKDGQNGKDGLPGKDGKDGQNGKDGL 312
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
991-1248 |
1.63e-09 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 62.23 E-value: 1.63e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 991 GDNSEGDPGCVGSPGLPGPPGLPGQRGEEGPPGMRGSPGPPGPiglQGERGLTGLTGDKGEPGPPGQPGYPGATGPPGLP 1070
Cdd:NF038329 115 GDGEKGEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGE---RGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEK 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1071 GIKGERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPRGE--RGPQGNSGEKGDQGFQGQPGFPGPPGPPGFPGKVGSPGPP 1148
Cdd:NF038329 192 GPQGPRGETGPAGEQGPAGPAGPDGEAGPAGEDGPAGPagDGQQGPDGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAGPD 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1149 GPQAEKGSEGIRGPSGLpgspgppgppgiqgpaglDGLDGKDGKPGlrgdpgpagppglmgPPGFKGKTGHPGLPGPKGD 1228
Cdd:NF038329 272 GPDGKDGERGPVGPAGK------------------DGQNGKDGLPG---------------KDGKDGQNGKDGLPGKDGK 318
|
250 260
....*....|....*....|
gi 767902465 1229 CGKPGPPGSTGRPGAEGEPG 1248
Cdd:NF038329 319 DGQPGKDGLPGKDGKDGQPG 338
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1176-1400 |
6.12e-09 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 60.30 E-value: 6.12e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1176 GIQGPAGLDGLDGKDGKPGLRGDPGPAGPPGLMGPpgfKGKTGHPGLPGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGR 1255
Cdd:NF038329 132 GEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGP---QGEAGPQGPAGKDGEAGAKGPAGEKGPQGPRGETGPAGEQGP 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1256 PGPPGHVGPPGPPGQPGPAGISAVGLKGDRGATGERGLAglpgqpgppghpgppgepgtdGAAGKEGPPGKQGfygPPGP 1335
Cdd:NF038329 209 AGPAGPDGEAGPAGEDGPAGPAGDGQQGPDGDPGPTGED---------------------GPQGPDGPAGKDG---PRGD 264
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 767902465 1336 KGDPGAAGQKGQAGEKGRAGMPGGPGKSGSMGPVGPPGPAGERGHPGAPGPSGSPGLPGVPGSMG 1400
Cdd:NF038329 265 RGEAGPDGPDGKDGERGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQPGKDGLPG 329
|
|
| SPT5 |
COG5164 |
Transcription elongation factor SPT5 [Transcription]; |
672-874 |
1.07e-05 |
|
Transcription elongation factor SPT5 [Transcription];
Pssm-ID: 444063 [Multi-domain] Cd Length: 495 Bit Score: 50.03 E-value: 1.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 672 QGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVQGPAGPKG---EKGDGCTACPSLQGTVTDMAGRPGQPGP-- 746
Cdd:COG5164 51 QGSTTPAGNTGGTRPAGNQGATGPAQNQGGTTPAQNQGGTRPAGNTGgttPAGDGGATGPPDDGGATGPPDDGGSTTPps 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 747 KGEQGPEGVG--RPGKPGQPGLPGVQGPPGLKGVQGEPGPPGRGVQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQG 824
Cdd:COG5164 131 GGSTTPPGDGgsTPPGPGSTGPGGSTTPPGDGGSTTPPGPGGSTTPPDDGGSTTPPNKGETGTDIPTGGTPRQGPDGPVK 210
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 767902465 825 SPGVKGATGPvgppgasvsgPPGRDGQQGQTGLRGTPGEKGPRGEKGEPG 874
Cdd:COG5164 211 KDDKNGKGNP----------PDDRGGKTGPKDQRPKTNPIERRGPERPEA 250
|
|
| Collagen |
pfam01391 |
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen ... |
742-803 |
1.33e-04 |
|
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen superfamily. Collagens are generally extracellular structural proteins involved in formation of connective tissue structure. The alignment contains 20 copies of the G-X-Y repeat that forms a triple helix. The first position of the repeat is glycine, the second and third positions can be any residue but are frequently proline and hydroxy-proline. Collagens are post translationally modified by proline hydroxylase to form the hydroxy-proline residues. Defective hydroxylation is the cause of scurvy. Some members of the collagen superfamily are not involved in connective tissue structure but share the same triple helical structure. The family includes bacterial collagen-like triple-helix repeat proteins.
Pssm-ID: 460189 [Multi-domain] Cd Length: 57 Bit Score: 41.33 E-value: 1.33e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 767902465 742 GQPGPKGEQGPegvgrpgkPGQPGLPGVQGPPGLKGVQGEPGPPG-RGVQGPQGEPGAPGLPG 803
Cdd:pfam01391 1 GPPGPPGPPGP--------PGPPGPPGPPGPPGPPGPPGEPGPPGpPGPPGPPGPPGAPGAPG 55
|
|
| Collagen |
pfam01391 |
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen ... |
1441-1493 |
1.62e-04 |
|
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen superfamily. Collagens are generally extracellular structural proteins involved in formation of connective tissue structure. The alignment contains 20 copies of the G-X-Y repeat that forms a triple helix. The first position of the repeat is glycine, the second and third positions can be any residue but are frequently proline and hydroxy-proline. Collagens are post translationally modified by proline hydroxylase to form the hydroxy-proline residues. Defective hydroxylation is the cause of scurvy. Some members of the collagen superfamily are not involved in connective tissue structure but share the same triple helical structure. The family includes bacterial collagen-like triple-helix repeat proteins.
Pssm-ID: 460189 [Multi-domain] Cd Length: 57 Bit Score: 40.94 E-value: 1.62e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 767902465 1441 PGRPGPPGKDGAPGRPGAPGSPGLPGQIGREGRQGLPGVRGLPGTKGEKGDIG 1493
Cdd:pfam01391 3 PGPPGPPGPPGPPGPPGPPGPPGPPGPPGEPGPPGPPGPPGPPGPPGAPGAPG 55
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
295-423 |
1.63e-04 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 46.05 E-value: 1.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 295 GRISQKAERGAKVHQETAADECPPCVHGARDSNVTLAPSGPKGGKGERGLPGPPGSKGEKGARGndcvrispdaplqcae 374
Cdd:NF038329 233 GQQGPDGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAGPDGPDGKDGERGPVGPAGKDGQNGKDG---------------- 296
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 767902465 375 gPKGEKGESGALGPSGLPGSTGEKGQKGEkgdggiKGVPGKPGRDGRPG 423
Cdd:NF038329 297 -LPGKDGKDGQNGKDGLPGKDGKDGQPGK------DGLPGKDGKDGQPG 338
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
644-849 |
3.12e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.28 E-value: 3.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 644 GDVRVVALPGP-SGEKGEPGPPGFGLPGKQGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVQGPAGPKGEKGD 722
Cdd:PRK07764 580 GDWQVEAVVGPaPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAV 659
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 723 gctacPSLQGTVTDMAGRPGQPGPKG-EQGPEGVGRPGKPGQPGLPGVQGPPGLKGVQGEPGPPGRGVQGPQGEPGAPGL 801
Cdd:PRK07764 660 -----PDASDGGDGWPAKAGGAAPAApPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPA 734
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 767902465 802 PGIQGLPGPRGPPGPTGEKGAQGSPGVKGATGPVGPPGASVSGPPGRD 849
Cdd:PRK07764 735 ADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEE 782
|
|
| SPT5 |
COG5164 |
Transcription elongation factor SPT5 [Transcription]; |
747-874 |
4.74e-03 |
|
Transcription elongation factor SPT5 [Transcription];
Pssm-ID: 444063 [Multi-domain] Cd Length: 495 Bit Score: 41.55 E-value: 4.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 747 KGEQGPEGVGRPGKPGQPGLPGVQGPPGLKGVQGEPGPPgrgvqGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGSP 826
Cdd:COG5164 1 TGLYGPGKTGPSDPGGVTTPAGSQGSTKPAQNQGSTRPA-----GNTGGTRPAQNQGSTTPAGNTGGTRPAGNQGATGPA 75
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 767902465 827 GVKGATGPVGPPGAsvSGPPGRDGQQGQTGLRGTPGEKGPRGEKGEPG 874
Cdd:COG5164 76 QNQGGTTPAQNQGG--TRPAGNTGGTTPAGDGGATGPPDDGGATGPPD 121
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
732-882 |
5.56e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.51 E-value: 5.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 732 GTVTDMAGRPGQPGPKGEQGPEGVGRPGKPGQPGLPGVQGPPGlkgvqgEPGPPGRGVQGPQGEPGAPGLPGIQGLPGPR 811
Cdd:PRK07764 589 GPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAG------AAAAPAEASAAPAPGVAAPEHHPKHVAVPDA 662
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767902465 812 GPPGPTGEKGAQGSPGVKGATGPVGPPGASVSGPPGRDGQQGQTGLRGTPGEKGPRGEKGEPGECSCPSQG 882
Cdd:PRK07764 663 SDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSP 733
|
|
| Collagen |
pfam01391 |
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen ... |
819-873 |
6.91e-03 |
|
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen superfamily. Collagens are generally extracellular structural proteins involved in formation of connective tissue structure. The alignment contains 20 copies of the G-X-Y repeat that forms a triple helix. The first position of the repeat is glycine, the second and third positions can be any residue but are frequently proline and hydroxy-proline. Collagens are post translationally modified by proline hydroxylase to form the hydroxy-proline residues. Defective hydroxylation is the cause of scurvy. Some members of the collagen superfamily are not involved in connective tissue structure but share the same triple helical structure. The family includes bacterial collagen-like triple-helix repeat proteins.
Pssm-ID: 460189 [Multi-domain] Cd Length: 57 Bit Score: 36.32 E-value: 6.91e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 767902465 819 EKGAQGSPGVKGATGPVGPPGASvsGPPGRDGQQGQTGLRGTPGEKGPRGEKGEP 873
Cdd:pfam01391 5 PPGPPGPPGPPGPPGPPGPPGPP--GPPGEPGPPGPPGPPGPPGPPGAPGAPGPP 57
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| TSPN |
smart00210 |
Thrombospondin N-terminal -like domains; Heparin-binding and cell adhesion domain of ... |
50-231 |
5.18e-59 |
|
Thrombospondin N-terminal -like domains; Heparin-binding and cell adhesion domain of thrombospondin
Pssm-ID: 214560 Cd Length: 184 Bit Score: 201.05 E-value: 5.18e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 50 GFNLIHRLSLM-KTSAIKKIRNPKGP-LILRLG-AAPVTQPTRRVFPRGLPEEFALVLTLLLKKhthQKTWYLFQVTDAN 126
Cdd:smart00210 1 GQDLLQVFDLPsLSFAIRQVVGPEPGsPAYRLGdPALVPQPTRDLFPSGLPEDFSLLTTFRQTP---KSRGVLFAIYDAQ 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 127 GYPQISLEVNSQERSLELRAQGQDGDFVSCIFPVPQLFDLRWHKLMLSVAGRVASVHVDCSSASSQPLGPRR--PMRPVG 204
Cdd:smart00210 78 NVRQFGLEVDGRANTLLLRYQGVDGKQHTVSFRNLPLADGQWHKLALSVSGSSATLYVDCNEIDSRPLDRPGqpPIDTDG 157
|
170 180
....*....|....*....|....*..
gi 767902465 205 HVFLGLDAEQGKPVSFDLQQVHIYCDP 231
Cdd:smart00210 158 IEVRGAQAADRKPFQGDLQQLKIVCDP 184
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
512-802 |
4.29e-17 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 85.73 E-value: 4.29e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 512 TLPEGFQNFVGlpgkPGPKGEPGdPVPARGDPGIQGIKGEKGEPclscssvvgaqhlvsstgasgdvgspgfGLPGLPGR 591
Cdd:NF038329 105 ELDEGLQQLKG----DGEKGEPG-PAGPAGPAGEQGPRGDRGET----------------------------GPAGPAGP 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 592 AGVPGLKGEKGNFGEAGPAGSPGPPGPVGPAGIKGAKGEPCEPCPALSNLQDGDVRVVALPGPSGEKGEPGPPGFGLPGK 671
Cdd:NF038329 152 PGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGPRGETGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAG 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 672 QGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVQGPAGPKGEKGDgctacpslqgtvTDMAGRPGQPGPKGEQG 751
Cdd:NF038329 232 DGQQGPDGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAGPDGPDGKDGERGP------------VGPAGKDGQNGKDGLPG 299
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 767902465 752 PEgvGRPGKPGQPGLPGVQGPPGLKGVQGEPGPPGRGVQGPQGEPGAPGLP 802
Cdd:NF038329 300 KD--GKDGQNGKDGLPGKDGKDGQPGKDGLPGKDGKDGQPGKPAPKTPEVP 348
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
739-875 |
7.84e-15 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 78.79 E-value: 7.84e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 739 GRPGQPGPKGEQGPEG-VGRPGKPGQPGLPGVQGPPGLKGVQGEPGPpgrgvQGPQGEPGAPGLPGIQGLPGPRGPPGPT 817
Cdd:NF038329 117 GEKGEPGPAGPAGPAGeQGPRGDRGETGPAGPAGPPGPQGERGEKGP-----AGPQGEAGPQGPAGKDGEAGAKGPAGEK 191
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 767902465 818 GEKGAQGSPGVKGATGPVGPPGASVS---------------------GPPGRDGQQGQTGLRGTPGEKGPRGEKGEPGE 875
Cdd:NF038329 192 GPQGPRGETGPAGEQGPAGPAGPDGEagpagedgpagpagdgqqgpdGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAGP 270
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
337-596 |
2.27e-13 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 74.17 E-value: 2.27e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 337 GGKGERGLPGPPGSKGEKGARGNDcvrispdaplqcaeGPKGEKGESGALGPSGLPGSTGEKGQKGEKGDGGIKGVPGKP 416
Cdd:NF038329 117 GEKGEPGPAGPAGPAGEQGPRGDR--------------GETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEA 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 417 GRDGRPGEICVIGPKGQKGDPGFVGPEGLAGEPGPPGLPGPPGIGLPGTPGDPGGPPGPkgdkgssGIPGKEGPGGKPGK 496
Cdd:NF038329 183 GAKGPAGEKGPQGPRGETGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAGDGQQGPDGDP-------GPTGEDGPQGPDGP 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 497 PGVKGEKGDPCEVCPTLPEGFQNFVGLPGKPGPKGEPGDpvpaRGDPGIQGIKGEKGEPCLScssvvgaqhlvsstGASG 576
Cdd:NF038329 256 AGKDGPRGDRGEAGPDGPDGKDGERGPVGPAGKDGQNGK----DGLPGKDGKDGQNGKDGLP--------------GKDG 317
|
250 260
....*....|....*....|.
gi 767902465 577 DVGSPGF-GLPGLPGRAGVPG 596
Cdd:NF038329 318 KDGQPGKdGLPGKDGKDGQPG 338
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1143-1386 |
4.34e-13 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 73.40 E-value: 4.34e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1143 GSPGPPGPQAEKGSEGIRGPSGLPGSPGPPGPPGIQGPAGLDGLDGKDGKPGLRGDPGPAGPPGLMGPPGFKGKTGHPGL 1222
Cdd:NF038329 120 GEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGPRGE 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1223 PGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGRPGppghvgppgppgqpgpagisaVGLKGDRGATGERGLAGLPGQPGP 1302
Cdd:NF038329 200 TGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAGDGQ---------------------QGPDGDPGPTGEDGPQGPDGPAGK 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1303 PGHPGPPGEPGTDGAAGKEGPPGKQGFYGPPGPKGDPGAAGQKGQAGEKGRAGMPGGPGKSGSMGPVGPPGPAGERGHPG 1382
Cdd:NF038329 259 DGPRGDRGEAGPDGPDGKDGERGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQPGKDGLPGKDGKDGQPG 338
|
....
gi 767902465 1383 APGP 1386
Cdd:NF038329 339 KPAP 342
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1037-1248 |
1.45e-12 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 71.86 E-value: 1.45e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1037 QGERGLTGLTGDKGEPGPPGQPGYPGATGPPGLPGIKGERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPRGERGPQGNSG 1116
Cdd:NF038329 119 KGEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGPRG 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1117 EKGDQGFQGQPGFPGPPGPPGFPGKVGSPGPP-----GPQAEKGSEGIRGPSGLPGSPGPPGPPGIQGPAGLDGLDGKDG 1191
Cdd:NF038329 199 ETGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAgdgqqGPDGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAGPDGPDGKDG 278
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 767902465 1192 KPGLRGDPGPAGPPGLMGPPGFKGKTGHPGLPGPKGDCGKPGPPGSTGRPGAEGEPG 1248
Cdd:NF038329 279 ERGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQPGKDGLPGKDGKDG 335
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1214-1484 |
1.83e-11 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 68.39 E-value: 1.83e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1214 KGKTGHPGLPGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGRPGPPGHVgppgppgqpgpagisavGLKGDRGATGERGL 1293
Cdd:NF038329 134 QGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEA-----------------GAKGPAGEKGPQGP 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1294 AGLPGQPGPPGHPGPPGEPGTDGAAGKEGPPGKQGfygppgpkgdpgaAGQKGQAGEKGRAGMPGGPGKSGSMGPVGPPG 1373
Cdd:NF038329 197 RGETGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAG-------------DGQQGPDGDPGPTGEDGPQGPDGPAGKDGPRG 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1374 PAGERGHPGAPGPSGSPGLPGVPGSMGDmvnydeikrfirqeiikmfdermayytsrmqfpmemAAAPGRPGPPGKDGAP 1453
Cdd:NF038329 264 DRGEAGPDGPDGKDGERGPVGPAGKDGQ------------------------------------NGKDGLPGKDGKDGQN 307
|
250 260 270
....*....|....*....|....*....|.
gi 767902465 1454 GRPGAPGSPGLPGQIGREGRQGLPGVRGLPG 1484
Cdd:NF038329 308 GKDGLPGKDGKDGQPGKDGLPGKDGKDGQPG 338
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1280-1494 |
3.19e-11 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 67.62 E-value: 3.19e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1280 GLKGDRGATGERGLAGLPGQPGPPGHPGPPGEPGTDGAAGKEGPPGKQGfygppgpkgDPGAAGQKGQAGEKGRAGMPGG 1359
Cdd:NF038329 117 GEKGEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAG---------PQGEAGPQGPAGKDGEAGAKGP 187
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1360 PGKSGSMGPVGPPGPAGERGHPGAPGPSGSPGLPGVPGSMGDMVNYDEIKRFIRQEIikmfdermayytsrmqfpmemaa 1439
Cdd:NF038329 188 AGEKGPQGPRGETGPAGEQGPAGPAGPDGEAGPAGEDGPAGPAGDGQQGPDGDPGPT----------------------- 244
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 767902465 1440 apGRPGPPGKDGAPGRPGAPGSPGLPGQIGREGRQGLPGVRGLPGTKGEKGDIGI 1494
Cdd:NF038329 245 --GEDGPQGPDGPAGKDGPRGDRGEAGPDGPDGKDGERGPVGPAGKDGQNGKDGL 297
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
374-717 |
1.24e-10 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 65.70 E-value: 1.24e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 374 EGPKGEKGESGALGPSGLPGSTGEKGQKGEKGDGGIKGVPGKPGRDGRPGEICVIGPKGQKGDPGFVGPEGLAGEPgppg 453
Cdd:NF038329 116 DGEKGEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEK---- 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 454 lpgppgiglpgtpgdpggppgpkgdkgssgipgkegpggkpgkpgvkGEKGDPCEVCPTLPEGFQNFVGLPGKPGPKGEP 533
Cdd:NF038329 192 -----------------------------------------------GPQGPRGETGPAGEQGPAGPAGPDGEAGPAGED 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 534 GDPVPA-RGDPGIQGIKGEKGEpclscssvvgaqhlvssTGASGDVgspgfglpGLPGRAGVPGLKGEKGNFGEagpags 612
Cdd:NF038329 225 GPAGPAgDGQQGPDGDPGPTGE-----------------DGPQGPD--------GPAGKDGPRGDRGEAGPDGP------ 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 613 pgppgpvgpagiKGAKGEPCEPCPALSNLQDGDvrvVALPGPSGekgepgppgfglpgKQGKAGERGLKGQKGDAGNPGD 692
Cdd:NF038329 274 ------------DGKDGERGPVGPAGKDGQNGK---DGLPGKDG--------------KDGQNGKDGLPGKDGKDGQPGK 324
|
330 340
....*....|....*....|....*
gi 767902465 693 PGTPGTTGRPGLSGEPGVQGPAGPK 717
Cdd:NF038329 325 DGLPGKDGKDGQPGKPAPKTPEVPQ 349
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1063-1249 |
1.58e-10 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 65.31 E-value: 1.58e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1063 ATGPPGLPGIKGERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPRGERGPQGNSGEKGDQGFQGQPGFPGPPGPPGFPGKV 1142
Cdd:NF038329 124 PAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEKGPQGPRGETGPA 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1143 GSPGPPGPQAEKGSEGIRGPSGLPGSPGPPG--PPGIQGPAGLDGLDGKDGKPGLRGDPGPAGPPGLMGPPGFKGKTGHP 1220
Cdd:NF038329 204 GEQGPAGPAGPDGEAGPAGEDGPAGPAGDGQqgPDGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAGPDGPDGKDGERGPV 283
|
170 180
....*....|....*....|....*....
gi 767902465 1221 GLPGPKGDCGKPGPPGSTGRPGAEGEPGA 1249
Cdd:NF038329 284 GPAGKDGQNGKDGLPGKDGKDGQNGKDGL 312
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
991-1248 |
1.63e-09 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 62.23 E-value: 1.63e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 991 GDNSEGDPGCVGSPGLPGPPGLPGQRGEEGPPGMRGSPGPPGPiglQGERGLTGLTGDKGEPGPPGQPGYPGATGPPGLP 1070
Cdd:NF038329 115 GDGEKGEPGPAGPAGPAGEQGPRGDRGETGPAGPAGPPGPQGE---RGEKGPAGPQGEAGPQGPAGKDGEAGAKGPAGEK 191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1071 GIKGERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPRGE--RGPQGNSGEKGDQGFQGQPGFPGPPGPPGFPGKVGSPGPP 1148
Cdd:NF038329 192 GPQGPRGETGPAGEQGPAGPAGPDGEAGPAGEDGPAGPagDGQQGPDGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAGPD 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1149 GPQAEKGSEGIRGPSGLpgspgppgppgiqgpaglDGLDGKDGKPGlrgdpgpagppglmgPPGFKGKTGHPGLPGPKGD 1228
Cdd:NF038329 272 GPDGKDGERGPVGPAGK------------------DGQNGKDGLPG---------------KDGKDGQNGKDGLPGKDGK 318
|
250 260
....*....|....*....|
gi 767902465 1229 CGKPGPPGSTGRPGAEGEPG 1248
Cdd:NF038329 319 DGQPGKDGLPGKDGKDGQPG 338
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
1176-1400 |
6.12e-09 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 60.30 E-value: 6.12e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1176 GIQGPAGLDGLDGKDGKPGLRGDPGPAGPPGLMGPpgfKGKTGHPGLPGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGR 1255
Cdd:NF038329 132 GEQGPRGDRGETGPAGPAGPPGPQGERGEKGPAGP---QGEAGPQGPAGKDGEAGAKGPAGEKGPQGPRGETGPAGEQGP 208
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 1256 PGPPGHVGPPGPPGQPGPAGISAVGLKGDRGATGERGLAglpgqpgppghpgppgepgtdGAAGKEGPPGKQGfygPPGP 1335
Cdd:NF038329 209 AGPAGPDGEAGPAGEDGPAGPAGDGQQGPDGDPGPTGED---------------------GPQGPDGPAGKDG---PRGD 264
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 767902465 1336 KGDPGAAGQKGQAGEKGRAGMPGGPGKSGSMGPVGPPGPAGERGHPGAPGPSGSPGLPGVPGSMG 1400
Cdd:NF038329 265 RGEAGPDGPDGKDGERGPVGPAGKDGQNGKDGLPGKDGKDGQNGKDGLPGKDGKDGQPGKDGLPG 329
|
|
| SPT5 |
COG5164 |
Transcription elongation factor SPT5 [Transcription]; |
672-874 |
1.07e-05 |
|
Transcription elongation factor SPT5 [Transcription];
Pssm-ID: 444063 [Multi-domain] Cd Length: 495 Bit Score: 50.03 E-value: 1.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 672 QGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVQGPAGPKG---EKGDGCTACPSLQGTVTDMAGRPGQPGP-- 746
Cdd:COG5164 51 QGSTTPAGNTGGTRPAGNQGATGPAQNQGGTTPAQNQGGTRPAGNTGgttPAGDGGATGPPDDGGATGPPDDGGSTTPps 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 747 KGEQGPEGVG--RPGKPGQPGLPGVQGPPGLKGVQGEPGPPGRGVQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQG 824
Cdd:COG5164 131 GGSTTPPGDGgsTPPGPGSTGPGGSTTPPGDGGSTTPPGPGGSTTPPDDGGSTTPPNKGETGTDIPTGGTPRQGPDGPVK 210
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|
gi 767902465 825 SPGVKGATGPvgppgasvsgPPGRDGQQGQTGLRGTPGEKGPRGEKGEPG 874
Cdd:COG5164 211 KDDKNGKGNP----------PDDRGGKTGPKDQRPKTNPIERRGPERPEA 250
|
|
| Collagen |
pfam01391 |
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen ... |
742-803 |
1.33e-04 |
|
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen superfamily. Collagens are generally extracellular structural proteins involved in formation of connective tissue structure. The alignment contains 20 copies of the G-X-Y repeat that forms a triple helix. The first position of the repeat is glycine, the second and third positions can be any residue but are frequently proline and hydroxy-proline. Collagens are post translationally modified by proline hydroxylase to form the hydroxy-proline residues. Defective hydroxylation is the cause of scurvy. Some members of the collagen superfamily are not involved in connective tissue structure but share the same triple helical structure. The family includes bacterial collagen-like triple-helix repeat proteins.
Pssm-ID: 460189 [Multi-domain] Cd Length: 57 Bit Score: 41.33 E-value: 1.33e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 767902465 742 GQPGPKGEQGPegvgrpgkPGQPGLPGVQGPPGLKGVQGEPGPPG-RGVQGPQGEPGAPGLPG 803
Cdd:pfam01391 1 GPPGPPGPPGP--------PGPPGPPGPPGPPGPPGPPGEPGPPGpPGPPGPPGPPGAPGAPG 55
|
|
| Collagen |
pfam01391 |
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen ... |
1441-1493 |
1.62e-04 |
|
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen superfamily. Collagens are generally extracellular structural proteins involved in formation of connective tissue structure. The alignment contains 20 copies of the G-X-Y repeat that forms a triple helix. The first position of the repeat is glycine, the second and third positions can be any residue but are frequently proline and hydroxy-proline. Collagens are post translationally modified by proline hydroxylase to form the hydroxy-proline residues. Defective hydroxylation is the cause of scurvy. Some members of the collagen superfamily are not involved in connective tissue structure but share the same triple helical structure. The family includes bacterial collagen-like triple-helix repeat proteins.
Pssm-ID: 460189 [Multi-domain] Cd Length: 57 Bit Score: 40.94 E-value: 1.62e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|...
gi 767902465 1441 PGRPGPPGKDGAPGRPGAPGSPGLPGQIGREGRQGLPGVRGLPGTKGEKGDIG 1493
Cdd:pfam01391 3 PGPPGPPGPPGPPGPPGPPGPPGPPGPPGEPGPPGPPGPPGPPGPPGAPGAPG 55
|
|
| gly_rich_SclB |
NF038329 |
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like ... |
295-423 |
1.63e-04 |
|
LPXTG-anchored collagen-like adhesin Scl2/SclB; SclB (or Scl2 - streptococcal collagen-like protein 2) is an LPXTG-anchored surface-anchored adhesin with a variable-length region of triple helix-forming collagen-like Gly-Xaa-Xaa repeats.
Pssm-ID: 468478 [Multi-domain] Cd Length: 440 Bit Score: 46.05 E-value: 1.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 295 GRISQKAERGAKVHQETAADECPPCVHGARDSNVTLAPSGPKGGKGERGLPGPPGSKGEKGARGndcvrispdaplqcae 374
Cdd:NF038329 233 GQQGPDGDPGPTGEDGPQGPDGPAGKDGPRGDRGEAGPDGPDGKDGERGPVGPAGKDGQNGKDG---------------- 296
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 767902465 375 gPKGEKGESGALGPSGLPGSTGEKGQKGEkgdggiKGVPGKPGRDGRPG 423
Cdd:NF038329 297 -LPGKDGKDGQNGKDGLPGKDGKDGQPGK------DGLPGKDGKDGQPG 338
|
|
| Med15 |
pfam09606 |
ARC105 or Med15 subunit of Mediator complex non-fungal; The approx. 70 residue Med15 domain of ... |
687-874 |
3.21e-04 |
|
ARC105 or Med15 subunit of Mediator complex non-fungal; The approx. 70 residue Med15 domain of the ARC-Mediator co-activator is a three-helix bundle with marked similarity to the KIX domain. The sterol regulatory element binding protein (SREBP) family of transcription activators use the ARC105 subunit to activate target genes in the regulation of cholesterol and fatty acid homeostasis. In addition, Med15 is a critical transducer of gene activation signals that control early metazoan development.
Pssm-ID: 312941 [Multi-domain] Cd Length: 732 Bit Score: 45.38 E-value: 3.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 687 AGNPGDPGTPGTTGRPGLSGEPGVQGPAGPK------GEKGDGCTACPSLQGTVTDMAGRPGQPGPKGEQGPEGVgrPGK 760
Cdd:pfam09606 111 GQQMGGPGTASNLLASLGRPQMPMGGAGFPSqmsrvgRMQPGGQAGGMMQPSSGQPGSGTPNQMGPNGGPGQGQA--GGM 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 761 PGQPGLPGVQGPPGLKGVQGEPGPPGRGVQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGSPGVKGATG------P 834
Cdd:pfam09606 189 NGGQQGPMGGQMPPQMGVPGMPGPADAGAQMGQQAQANGGMNPQQMGGAPNQVAMQQQQPQQQGQQSQLGMGInqmqqmP 268
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 767902465 835 VGPPGASVSGPPGRDGQQGQTGlrgtPGEKGPRGEKGEPG 874
Cdd:pfam09606 269 QGVGGGAGQGGPGQPMGPPGQQ----PGAMPNVMSIGDQN 304
|
|
| Collagen |
pfam01391 |
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen ... |
1440-1490 |
3.64e-04 |
|
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen superfamily. Collagens are generally extracellular structural proteins involved in formation of connective tissue structure. The alignment contains 20 copies of the G-X-Y repeat that forms a triple helix. The first position of the repeat is glycine, the second and third positions can be any residue but are frequently proline and hydroxy-proline. Collagens are post translationally modified by proline hydroxylase to form the hydroxy-proline residues. Defective hydroxylation is the cause of scurvy. Some members of the collagen superfamily are not involved in connective tissue structure but share the same triple helical structure. The family includes bacterial collagen-like triple-helix repeat proteins.
Pssm-ID: 460189 [Multi-domain] Cd Length: 57 Bit Score: 39.78 E-value: 3.64e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|.
gi 767902465 1440 APGRPGPPGKDGAPGRPGAPGSPGLPGQIGREGRQGLPGVRGLPGTKGEKG 1490
Cdd:pfam01391 5 PPGPPGPPGPPGPPGPPGPPGPPGPPGEPGPPGPPGPPGPPGPPGAPGAPG 55
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
644-849 |
3.12e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.28 E-value: 3.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 644 GDVRVVALPGP-SGEKGEPGPPGFGLPGKQGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVQGPAGPKGEKGD 722
Cdd:PRK07764 580 GDWQVEAVVGPaPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAV 659
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 723 gctacPSLQGTVTDMAGRPGQPGPKG-EQGPEGVGRPGKPGQPGLPGVQGPPGLKGVQGEPGPPGRGVQGPQGEPGAPGL 801
Cdd:PRK07764 660 -----PDASDGGDGWPAKAGGAAPAApPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPA 734
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 767902465 802 PGIQGLPGPRGPPGPTGEKGAQGSPGVKGATGPVGPPGASVSGPPGRD 849
Cdd:PRK07764 735 ADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEE 782
|
|
| SPT5 |
COG5164 |
Transcription elongation factor SPT5 [Transcription]; |
747-874 |
4.74e-03 |
|
Transcription elongation factor SPT5 [Transcription];
Pssm-ID: 444063 [Multi-domain] Cd Length: 495 Bit Score: 41.55 E-value: 4.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 747 KGEQGPEGVGRPGKPGQPGLPGVQGPPGLKGVQGEPGPPgrgvqGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGSP 826
Cdd:COG5164 1 TGLYGPGKTGPSDPGGVTTPAGSQGSTKPAQNQGSTRPA-----GNTGGTRPAQNQGSTTPAGNTGGTRPAGNQGATGPA 75
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 767902465 827 GVKGATGPVGPPGAsvSGPPGRDGQQGQTGLRGTPGEKGPRGEKGEPG 874
Cdd:COG5164 76 QNQGGTTPAQNQGG--TRPAGNTGGTTPAGDGGATGPPDDGGATGPPD 121
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
732-882 |
5.56e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.51 E-value: 5.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 732 GTVTDMAGRPGQPGPKGEQGPEGVGRPGKPGQPGLPGVQGPPGlkgvqgEPGPPGRGVQGPQGEPGAPGLPGIQGLPGPR 811
Cdd:PRK07764 589 GPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAG------AAAAPAEASAAPAPGVAAPEHHPKHVAVPDA 662
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767902465 812 GPPGPTGEKGAQGSPGVKGATGPVGPPGASVSGPPGRDGQQGQTGLRGTPGEKGPRGEKGEPGECSCPSQG 882
Cdd:PRK07764 663 SDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSP 733
|
|
| Collagen |
pfam01391 |
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen ... |
819-873 |
6.91e-03 |
|
Collagen triple helix repeat (20 copies); Members of this family belong to the collagen superfamily. Collagens are generally extracellular structural proteins involved in formation of connective tissue structure. The alignment contains 20 copies of the G-X-Y repeat that forms a triple helix. The first position of the repeat is glycine, the second and third positions can be any residue but are frequently proline and hydroxy-proline. Collagens are post translationally modified by proline hydroxylase to form the hydroxy-proline residues. Defective hydroxylation is the cause of scurvy. Some members of the collagen superfamily are not involved in connective tissue structure but share the same triple helical structure. The family includes bacterial collagen-like triple-helix repeat proteins.
Pssm-ID: 460189 [Multi-domain] Cd Length: 57 Bit Score: 36.32 E-value: 6.91e-03
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 767902465 819 EKGAQGSPGVKGATGPVGPPGASvsGPPGRDGQQGQTGLRGTPGEKGPRGEKGEP 873
Cdd:pfam01391 5 PPGPPGPPGPPGPPGPPGPPGPP--GPPGEPGPPGPPGPPGPPGPPGAPGAPGPP 57
|
|
| PHA03169 |
PHA03169 |
hypothetical protein; Provisional |
698-877 |
7.34e-03 |
|
hypothetical protein; Provisional
Pssm-ID: 223003 [Multi-domain] Cd Length: 413 Bit Score: 40.72 E-value: 7.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 698 TTGRPGLSGEPGVQGPAGPKGEKGDGCTACPSLQGTVTDMAGRPGQPGPKGEQGPEGVGRPGKPGQPGLPGVQGPPGLKG 777
Cdd:PHA03169 77 EESRHGEKEERGQGGPSGSGSESVGSPTPSPSGSAEELASGLSPENTSGSSPESPASHSPPPSPPSHPGPHEPAPPESHN 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 778 vqGEPGPPGRGVQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGSPGVKGATGPVGPPGASVSGPPGRDGQQGQTGL 857
Cdd:PHA03169 157 --PSPNQQPSSFLQPSHEDSPEEPEPPTSEPEPDSPGPPQSETPTSSPPPQSPPDEPGEPQSPTPQQAPSPNTQQAVEHE 234
|
170 180
....*....|....*....|
gi 767902465 858 RGTPGEKGPRGEKGEPGECS 877
Cdd:PHA03169 235 DEPTEPEREGPPFPGHRSHS 254
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
706-881 |
7.87e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 40.74 E-value: 7.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 706 GEPGVQGPAGPKGEKGDGCtacPSLQGTVTDMAGRPGQPGPKGEQGPegvGRPGKPGQPGLPGVQGPPGLKGVQGEPGPP 785
Cdd:PRK07764 590 PAPGAAGGEGPPAPASSGP---PEEAARPAAPAAPAAPAAPAPAGAA---AAPAEASAAPAPGVAAPEHHPKHVAVPDAS 663
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767902465 786 grgvQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGSPGVkgATGPVGPPGASVSGPPGRDGQQGQTGLRGTPGEKG 865
Cdd:PRK07764 664 ----DGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPA--PAPAATPPAGQADDPAAQPPQAAQGASAPSPAADD 737
|
170
....*....|....*.
gi 767902465 866 PRGEKGEPGECSCPSQ 881
Cdd:PRK07764 738 PVPLPPEPDDPPDPAG 753
|
|
|