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Conserved domains on  [gi|767947387|ref|XP_011514332|]
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dnaJ homolog subfamily C member 2 isoform X1 [Homo sapiens]

Protein Classification

DnaJ homolog subfamily C member 2( domain architecture ID 13425069)

DnaJ homolog subfamily C member 2 (DNAJC2) acts both as a chaperone in the cytosol and as a chromatin regulator in the nucleus

EC:  1.8.4.-
Gene Ontology:  GO:0006325|GO:0051083|GO:0006260|GO:2000279|GO:0045893
PubMed:  16952052

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ZUO1 super family cl34965
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 2-165 2.32e-22

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


The actual alignment was detected with superfamily member COG5269:

Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 97.80  E-value: 2.32e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767947387   2 NSSFEDVDIFYSFWYNFDSWREFSYLDEEEKEKAECRDERRWIEKQNRATRAQRKKEEMNRIRTLVDNAYSCDPRIKKFK 81
Cdd:COG5269  157 DSSLKEVEEFYEFWSNFDSWRTFEPLDEDYPDDMEERDRKRYSEAKNREKRAKLKNQDNARLKRLVQIAKKRDPRIKSFK 236

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767947387  82 EEEKAKKEAEKKAKAEAKRKEQEAK-----EKQRQAELEAARLAKEKEEEevrqqallaKKEKDIQKKAIKKERQKLRNS 156
Cdd:COG5269  237 EQEKEMKKIRKWEREAGARLKALAAlkgkaEAKNKAEIEAEALASATAVK---------KKAKEVMKKALKMEKKAIKNA 307


                 ....*....
gi 767947387 157 CKTWNHFSD 165
Cdd:COG5269  308 AKDADYFGD 316
RAC_head pfam16717
Ribosome-associated complex head domain; The RAC head domain is involved in ribosome binding.
 141-217 3.43e-17

Ribosome-associated complex head domain; The RAC head domain is involved in ribosome binding.


:

Pssm-ID: 435537  Cd Length: 87  Bit Score: 76.15  E-value: 3.43e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767947387  141 IQKKAIKKERQKLRNSCKTWNHFSDNEAERVKM----MEEVEKLCDRLELASLQCLNETLTSCT-KEVGKAALEKQIEEI 215
Cdd:pfam16717   1 AAKKALKKNKRVLRGSVKDANYFADGEAEKAAVidgvLADVDLLCEKLDDEELAELAEKLEGAKdAEAVKAVFEEEVKEL 80


                  ..
gi 767947387  216 NE 217
Cdd:pfam16717  81 VD 82
SANT cd00167
'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric ...
 350-397 1.52e-09

'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is also found in regulatory transcriptional repressor complexes where it also binds DNA.


:

Pssm-ID: 238096 [Multi-domain]  Cd Length: 45  Bit Score: 52.96  E-value: 1.52e-09
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 767947387 350 PWTTEEQKLLEQALKTYPVNtpeRWEKIAEAVPGRTKKDCMKRYKELV 397
Cdd:cd00167    1 PWTEEEDELLLEAVKKYGKN---NWEKIAKELPGRTPKQCRERWRNLL 45
SANT cd00167
'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric ...
 250-303 4.37e-03

'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is also found in regulatory transcriptional repressor complexes where it also binds DNA.


:

Pssm-ID: 238096 [Multi-domain]  Cd Length: 45  Bit Score: 34.86  E-value: 4.37e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 767947387 250 NWSEDDLQLLIKAVNLFPAGtnsRWEVIANYMNihsssgvKRTAKDVIGKAKSL 303
Cdd:cd00167    1 PWTEEEDELLLEAVKKYGKN---NWEKIAKELP-------GRTPKQCRERWRNL 44
 
Name Accession Description Interval E-value
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 2-165 2.32e-22

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 97.80  E-value: 2.32e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767947387   2 NSSFEDVDIFYSFWYNFDSWREFSYLDEEEKEKAECRDERRWIEKQNRATRAQRKKEEMNRIRTLVDNAYSCDPRIKKFK 81
Cdd:COG5269  157 DSSLKEVEEFYEFWSNFDSWRTFEPLDEDYPDDMEERDRKRYSEAKNREKRAKLKNQDNARLKRLVQIAKKRDPRIKSFK 236

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767947387  82 EEEKAKKEAEKKAKAEAKRKEQEAK-----EKQRQAELEAARLAKEKEEEevrqqallaKKEKDIQKKAIKKERQKLRNS 156
Cdd:COG5269  237 EQEKEMKKIRKWEREAGARLKALAAlkgkaEAKNKAEIEAEALASATAVK---------KKAKEVMKKALKMEKKAIKNA 307


                 ....*....
gi 767947387 157 CKTWNHFSD 165
Cdd:COG5269  308 AKDADYFGD 316
RAC_head pfam16717
Ribosome-associated complex head domain; The RAC head domain is involved in ribosome binding.
 141-217 3.43e-17

Ribosome-associated complex head domain; The RAC head domain is involved in ribosome binding.


Pssm-ID: 435537  Cd Length: 87  Bit Score: 76.15  E-value: 3.43e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767947387  141 IQKKAIKKERQKLRNSCKTWNHFSDNEAERVKM----MEEVEKLCDRLELASLQCLNETLTSCT-KEVGKAALEKQIEEI 215
Cdd:pfam16717   1 AAKKALKKNKRVLRGSVKDANYFADGEAEKAAVidgvLADVDLLCEKLDDEELAELAEKLEGAKdAEAVKAVFEEEVKEL 80


                  ..
gi 767947387  216 NE 217
Cdd:pfam16717  81 VD 82
SANT cd00167
'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric ...
 350-397 1.52e-09

'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is also found in regulatory transcriptional repressor complexes where it also binds DNA.


Pssm-ID: 238096 [Multi-domain]  Cd Length: 45  Bit Score: 52.96  E-value: 1.52e-09
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 767947387 350 PWTTEEQKLLEQALKTYPVNtpeRWEKIAEAVPGRTKKDCMKRYKELV 397
Cdd:cd00167    1 PWTEEEDELLLEAVKKYGKN---NWEKIAKELPGRTPKQCRERWRNLL 45
SANT smart00717
SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains;
348-399 6.71e-09

SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains;


Pssm-ID: 197842 [Multi-domain]  Cd Length: 49  Bit Score: 51.46  E-value: 6.71e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|..
gi 767947387   348 FTPWTTEEQKLLEQALKTYPVNtpeRWEKIAEAVPGRTKKDCMKRYKELVEM 399
Cdd:smart00717   1 KGEWTEEEDELLIELVKKYGKN---NWEKIAKELPGRTAEQCRERWRNLLKP 49
Myb_DNA-binding pfam00249
Myb-like DNA-binding domain; This family contains the DNA binding domains from Myb proteins, ...
 350-396 8.36e-08

Myb-like DNA-binding domain; This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family.


Pssm-ID: 459731 [Multi-domain]  Cd Length: 46  Bit Score: 48.27  E-value: 8.36e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 767947387  350 PWTTEEQKLLEQALKTYPvntpERWEKIAEAVPGRTKKDCMKRYKEL 396
Cdd:pfam00249   3 PWTPEEDELLLEAVEKLG----NRWKKIAKLLPGRTDNQCKNRWQNY 45
flgK PRK08471
flagellar hook-associated protein FlgK; Validated
 120-233 1.06e-03

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 236270 [Multi-domain]  Cd Length: 613  Bit Score: 41.19  E-value: 1.06e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767947387 120 AKEKEEEEVRQQAL--LAKKEKDIQKKAIKKERQKLRNScktWNHFSDN---EAERVKMMEEVEKLCDRLE-----LASL 189
Cdd:PRK08471  82 STELEYTDYEFSTLqeASQYFPDLDDTGILKDLQDYFNA---WNDFASNpkdSAQKQALAQKTETLTNNIKdtrerLDTL 158

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 767947387 190 Q-CLNETLTSCTKEVGKaaLEKQIEEINEQIrkEKEEAEARMRQA 233
Cdd:PRK08471 159 QkKVNEELKVTVDEINS--LGKQIAEINKQI--KEVEAGKTLKHA 199
Smc COG1196
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
 103-233 1.45e-03

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440809 [Multi-domain]  Cd Length: 983  Bit Score: 41.08  E-value: 1.45e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767947387 103 QEAKEKQRQAELEAARLAKEKEEEEVRQQALLAKKEKDIQKKAIKKERQKLRNSCKTWNHFSDNEAERVKMMEEVEKLCD 182
Cdd:COG1196  303 DIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELE 382

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 767947387 183 RLELASLQCLNETLTSCTKEVGKAALEKQIEEINEQIRKEKEEAEARMRQA 233
Cdd:COG1196  383 ELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAEL 433
SANT cd00167
'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric ...
 250-303 4.37e-03

'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is also found in regulatory transcriptional repressor complexes where it also binds DNA.


Pssm-ID: 238096 [Multi-domain]  Cd Length: 45  Bit Score: 34.86  E-value: 4.37e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 767947387 250 NWSEDDLQLLIKAVNLFPAGtnsRWEVIANYMNihsssgvKRTAKDVIGKAKSL 303
Cdd:cd00167    1 PWTEEEDELLLEAVKKYGKN---NWEKIAKELP-------GRTPKQCRERWRNL 44
 
Name Accession Description Interval E-value
ZUO1 COG5269
Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / ...
 2-165 2.32e-22

Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 227594 [Multi-domain]  Cd Length: 379  Bit Score: 97.80  E-value: 2.32e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767947387   2 NSSFEDVDIFYSFWYNFDSWREFSYLDEEEKEKAECRDERRWIEKQNRATRAQRKKEEMNRIRTLVDNAYSCDPRIKKFK 81
Cdd:COG5269  157 DSSLKEVEEFYEFWSNFDSWRTFEPLDEDYPDDMEERDRKRYSEAKNREKRAKLKNQDNARLKRLVQIAKKRDPRIKSFK 236

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767947387  82 EEEKAKKEAEKKAKAEAKRKEQEAK-----EKQRQAELEAARLAKEKEEEevrqqallaKKEKDIQKKAIKKERQKLRNS 156
Cdd:COG5269  237 EQEKEMKKIRKWEREAGARLKALAAlkgkaEAKNKAEIEAEALASATAVK---------KKAKEVMKKALKMEKKAIKNA 307


                 ....*....
gi 767947387 157 CKTWNHFSD 165
Cdd:COG5269  308 AKDADYFGD 316
RAC_head pfam16717
Ribosome-associated complex head domain; The RAC head domain is involved in ribosome binding.
 141-217 3.43e-17

Ribosome-associated complex head domain; The RAC head domain is involved in ribosome binding.


Pssm-ID: 435537  Cd Length: 87  Bit Score: 76.15  E-value: 3.43e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767947387  141 IQKKAIKKERQKLRNSCKTWNHFSDNEAERVKM----MEEVEKLCDRLELASLQCLNETLTSCT-KEVGKAALEKQIEEI 215
Cdd:pfam16717   1 AAKKALKKNKRVLRGSVKDANYFADGEAEKAAVidgvLADVDLLCEKLDDEELAELAEKLEGAKdAEAVKAVFEEEVKEL 80


                  ..
gi 767947387  216 NE 217
Cdd:pfam16717  81 VD 82
SANT cd00167
'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric ...
 350-397 1.52e-09

'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is also found in regulatory transcriptional repressor complexes where it also binds DNA.


Pssm-ID: 238096 [Multi-domain]  Cd Length: 45  Bit Score: 52.96  E-value: 1.52e-09
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 767947387 350 PWTTEEQKLLEQALKTYPVNtpeRWEKIAEAVPGRTKKDCMKRYKELV 397
Cdd:cd00167    1 PWTEEEDELLLEAVKKYGKN---NWEKIAKELPGRTPKQCRERWRNLL 45
SANT smart00717
SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains;
348-399 6.71e-09

SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains;


Pssm-ID: 197842 [Multi-domain]  Cd Length: 49  Bit Score: 51.46  E-value: 6.71e-09
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|..
gi 767947387   348 FTPWTTEEQKLLEQALKTYPVNtpeRWEKIAEAVPGRTKKDCMKRYKELVEM 399
Cdd:smart00717   1 KGEWTEEEDELLIELVKKYGKN---NWEKIAKELPGRTAEQCRERWRNLLKP 49
Myb_DNA-binding pfam00249
Myb-like DNA-binding domain; This family contains the DNA binding domains from Myb proteins, ...
 350-396 8.36e-08

Myb-like DNA-binding domain; This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family.


Pssm-ID: 459731 [Multi-domain]  Cd Length: 46  Bit Score: 48.27  E-value: 8.36e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*..
gi 767947387  350 PWTTEEQKLLEQALKTYPvntpERWEKIAEAVPGRTKKDCMKRYKEL 396
Cdd:pfam00249   3 PWTPEEDELLLEAVEKLG----NRWKKIAKLLPGRTDNQCKNRWQNY 45
SANT_CDC5_II cd11659
SANT/myb-like DNA-binding domain of Cell Division Cycle 5-Like Protein repeat II; In humans, ...
 344-398 4.26e-04

SANT/myb-like DNA-binding domain of Cell Division Cycle 5-Like Protein repeat II; In humans, cell division cycle 5-like protein (CDC5) functions in pre-mRNA splicing in cell cycle control. The DNA-binding, myb-like domain of CDC5 is a member of the SANT/myb group. SANT is named after 'SWI3, ADA2, N-CoR and TFIIIB', several factors that share this domain. The SANT domain resembles the 3 alpha-helix bundle of DNA-binding Myb domains and is found in a diverse set of proteins.


Pssm-ID: 212557 [Multi-domain]  Cd Length: 53  Bit Score: 38.06  E-value: 4.26e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 767947387 344 PYTDFTPWTTEEQKLLEQALKTYpvntPERWEKIAEAVpGRTKKDCMKRYKELVE 398
Cdd:cd11659    1 PSIKKTEWTREEDEKLLHLAKLL----PTQWRTIAPIV-GRTAQQCLERYNKLLD 50
flgK PRK08471
flagellar hook-associated protein FlgK; Validated
 120-233 1.06e-03

flagellar hook-associated protein FlgK; Validated


Pssm-ID: 236270 [Multi-domain]  Cd Length: 613  Bit Score: 41.19  E-value: 1.06e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767947387 120 AKEKEEEEVRQQAL--LAKKEKDIQKKAIKKERQKLRNScktWNHFSDN---EAERVKMMEEVEKLCDRLE-----LASL 189
Cdd:PRK08471  82 STELEYTDYEFSTLqeASQYFPDLDDTGILKDLQDYFNA---WNDFASNpkdSAQKQALAQKTETLTNNIKdtrerLDTL 158

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 767947387 190 Q-CLNETLTSCTKEVGKaaLEKQIEEINEQIrkEKEEAEARMRQA 233
Cdd:PRK08471 159 QkKVNEELKVTVDEINS--LGKQIAEINKQI--KEVEAGKTLKHA 199
Smc COG1196
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
 103-233 1.45e-03

Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 440809 [Multi-domain]  Cd Length: 983  Bit Score: 41.08  E-value: 1.45e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767947387 103 QEAKEKQRQAELEAARLAKEKEEEEVRQQALLAKKEKDIQKKAIKKERQKLRNSCKTWNHFSDNEAERVKMMEEVEKLCD 182
Cdd:COG1196  303 DIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELE 382

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 767947387 183 RLELASLQCLNETLTSCTKEVGKAALEKQIEEINEQIRKEKEEAEARMRQA 233
Cdd:COG1196  383 ELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAEL 433
SANT cd00167
'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric ...
 250-303 4.37e-03

'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is also found in regulatory transcriptional repressor complexes where it also binds DNA.


Pssm-ID: 238096 [Multi-domain]  Cd Length: 45  Bit Score: 34.86  E-value: 4.37e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 767947387 250 NWSEDDLQLLIKAVNLFPAGtnsRWEVIANYMNihsssgvKRTAKDVIGKAKSL 303
Cdd:cd00167    1 PWTEEEDELLLEAVKKYGKN---NWEKIAKELP-------GRTPKQCRERWRNL 44
PRK12704 PRK12704
phosphodiesterase; Provisional
 95-237 7.79e-03

phosphodiesterase; Provisional


Pssm-ID: 237177 [Multi-domain]  Cd Length: 520  Bit Score: 38.61  E-value: 7.79e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767947387  95 KAEAKRKEQEAKEKQRQAELEAARLAKEKEEEEVRQQALLAKKEKDIQKK--AIKKERQKLRNSCKTWNHfsdneaeRVK 172
Cdd:PRK12704  52 EAIKKEALLEAKEEIHKLRNEFEKELRERRNELQKLEKRLLQKEENLDRKleLLEKREEELEKKEKELEQ-------KQQ 124

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767947387 173 MMEEVEKLCDRLELASLQCLnETLTSCTKEVGKAALEKQIE-----EINEQIRKEKEEAEARMRQASKNT 237
Cdd:PRK12704 125 ELEKKEEELEELIEEQLQEL-ERISGLTAEEAKEILLEKVEeearhEAAVLIKEIEEEAKEEADKKAKEI 193
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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