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Conserved domains on  [gi|755527195|ref|XP_011246794|]
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uncharacterized protein C4orf51 homolog isoform X1 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4722 super family cl24427
Domain of unknown function (DUF4722); This family of proteins is found in vertebrates. ...
 1-124 9.82e-79

Domain of unknown function (DUF4722); This family of proteins is found in vertebrates. Proteins in this family are typically between 86 and 203 amino acids in length.


The actual alignment was detected with superfamily member pfam15849:

Pssm-ID: 292477  Cd Length: 167  Bit Score: 230.60  E-value: 9.82e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755527195    1 MTHFLYLTPEILLPFSPLTSTEFELIRRKAQQLWQDETRWSASSMTTYSGSYREKQLDEATCNRLAQRVGQPQFEYKPTP 80
Cdd:pfam15849   1 MSHFFYLTPQILLPFSPLTSTEFDLIRRKAGASWQDETRWSDSSVTTYTGSYRKKQLDESACSRFSFRAGQHRPECKQIS 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 755527195   81 LPGSSAYNTLpGHAGSQEAADGKGRLPDIASPSRDSPlNIKHKV 124
Cdd:pfam15849  81 LPNSSAYNTL-CRAGSQETTDGKGLFPDITSPFKDSP-DVKHKV 122
 
Name Accession Description Interval E-value
DUF4722 pfam15849
Domain of unknown function (DUF4722); This family of proteins is found in vertebrates. ...
 1-124 9.82e-79

Domain of unknown function (DUF4722); This family of proteins is found in vertebrates. Proteins in this family are typically between 86 and 203 amino acids in length.


Pssm-ID: 292477  Cd Length: 167  Bit Score: 230.60  E-value: 9.82e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755527195    1 MTHFLYLTPEILLPFSPLTSTEFELIRRKAQQLWQDETRWSASSMTTYSGSYREKQLDEATCNRLAQRVGQPQFEYKPTP 80
Cdd:pfam15849   1 MSHFFYLTPQILLPFSPLTSTEFDLIRRKAGASWQDETRWSDSSVTTYTGSYRKKQLDESACSRFSFRAGQHRPECKQIS 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 755527195   81 LPGSSAYNTLpGHAGSQEAADGKGRLPDIASPSRDSPlNIKHKV 124
Cdd:pfam15849  81 LPNSSAYNTL-CRAGSQETTDGKGLFPDITSPFKDSP-DVKHKV 122
 
Name Accession Description Interval E-value
DUF4722 pfam15849
Domain of unknown function (DUF4722); This family of proteins is found in vertebrates. ...
 1-124 9.82e-79

Domain of unknown function (DUF4722); This family of proteins is found in vertebrates. Proteins in this family are typically between 86 and 203 amino acids in length.


Pssm-ID: 292477  Cd Length: 167  Bit Score: 230.60  E-value: 9.82e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755527195    1 MTHFLYLTPEILLPFSPLTSTEFELIRRKAQQLWQDETRWSASSMTTYSGSYREKQLDEATCNRLAQRVGQPQFEYKPTP 80
Cdd:pfam15849   1 MSHFFYLTPQILLPFSPLTSTEFDLIRRKAGASWQDETRWSDSSVTTYTGSYRKKQLDESACSRFSFRAGQHRPECKQIS 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 755527195   81 LPGSSAYNTLpGHAGSQEAADGKGRLPDIASPSRDSPlNIKHKV 124
Cdd:pfam15849  81 LPNSSAYNTL-CRAGSQETTDGKGLFPDITSPFKDSP-DVKHKV 122
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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