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Conserved domains on  [gi|755526936|ref|XP_011246722|]
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nuclear envelope phosphatase-regulatory subunit 1 isoform X1 [Mus musculus]

Protein Classification

Tmemb_18A domain-containing protein( domain architecture ID 10561090)

Tmemb_18A domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Tmemb_18A pfam09771
Transmembrane protein 188; The function of this family of transmembrane proteins has not, as ...
 5-112 1.80e-67

Transmembrane protein 188; The function of this family of transmembrane proteins has not, as yet, been determined.


:

Pssm-ID: 401646  Cd Length: 118  Bit Score: 199.42  E-value: 1.80e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526936    5 EQAEDLKAFERRLTEYIHCLQPATGRWRMLLIVVSVCTATGAWNWLIDPETQKVSFFTSLWNHPFFTISCITLIGLFFAG 84
Cdd:pfam09771   1 TACEDLKAFERRLTEVIASLQPSTTRWRIVLGAISVCTAIGAWHWLTDPETSQVSFFQSLWNHPFFTISSITLILLFLFG 80

                          90       100
                  ....*....|....*....|....*...
gi 755526936   85 IHKRVVAPSIIAARCRTVLAEYNMSCDD 112
Cdd:pfam09771  81 VHKRVVAPSIIASRTRSVLSDFNMSCDD 108
 
Name Accession Description Interval E-value
Tmemb_18A pfam09771
Transmembrane protein 188; The function of this family of transmembrane proteins has not, as ...
 5-112 1.80e-67

Transmembrane protein 188; The function of this family of transmembrane proteins has not, as yet, been determined.


Pssm-ID: 401646  Cd Length: 118  Bit Score: 199.42  E-value: 1.80e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526936    5 EQAEDLKAFERRLTEYIHCLQPATGRWRMLLIVVSVCTATGAWNWLIDPETQKVSFFTSLWNHPFFTISCITLIGLFFAG 84
Cdd:pfam09771   1 TACEDLKAFERRLTEVIASLQPSTTRWRIVLGAISVCTAIGAWHWLTDPETSQVSFFQSLWNHPFFTISSITLILLFLFG 80

                          90       100
                  ....*....|....*....|....*...
gi 755526936   85 IHKRVVAPSIIAARCRTVLAEYNMSCDD 112
Cdd:pfam09771  81 VHKRVVAPSIIASRTRSVLSDFNMSCDD 108
 
Name Accession Description Interval E-value
Tmemb_18A pfam09771
Transmembrane protein 188; The function of this family of transmembrane proteins has not, as ...
 5-112 1.80e-67

Transmembrane protein 188; The function of this family of transmembrane proteins has not, as yet, been determined.


Pssm-ID: 401646  Cd Length: 118  Bit Score: 199.42  E-value: 1.80e-67
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755526936    5 EQAEDLKAFERRLTEYIHCLQPATGRWRMLLIVVSVCTATGAWNWLIDPETQKVSFFTSLWNHPFFTISCITLIGLFFAG 84
Cdd:pfam09771   1 TACEDLKAFERRLTEVIASLQPSTTRWRIVLGAISVCTAIGAWHWLTDPETSQVSFFQSLWNHPFFTISSITLILLFLFG 80

                          90       100
                  ....*....|....*....|....*...
gi 755526936   85 IHKRVVAPSIIAARCRTVLAEYNMSCDD 112
Cdd:pfam09771  81 VHKRVVAPSIIASRTRSVLSDFNMSCDD 108
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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