|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1610-1867 |
2.47e-71 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 239.48 E-value: 2.47e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1610 SPPFEYTIMAMIALNTIVLMMKFYGAS-VAYENALRVFNIVFTSLFSLECVLKVMAFGI-LNYFRDAWNIFDFVTVLGSI 1687
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPeEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1688 TDILVTEFGNnFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIDGE 1767
Cdd:pfam00520 81 ISLVLSSVGS-LSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1768 DedsdedefQITEHNNFRTFFQALMLLFRSATGEAWHNIMLSCLSGKpcdknsgiltadcGNEFAYFYFVSFIFLCSFLM 1847
Cdd:pfam00520 160 N--------PDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGK-------------GEFWAYIYFVSFIILGGFLL 218
|
250 260
....*....|....*....|
gi 568955973 1848 LNLFVAVIMDNFEYLTRDSS 1867
Cdd:pfam00520 219 LNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
188-462 |
6.01e-68 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 229.46 E-value: 6.01e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 188 WPPFEYMILATIIANCIVLALEQHLPDDDKTPmsERLDDTEPYFIGIFCFEAGIKIVALGFAFHkgsYLRNGWNVMDFVV 267
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEPLT--TVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 268 VLTGILATVGTE----FDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGKF 343
Cdd:pfam00520 76 VLPSLISLVLSSvgslSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 344 HTtcfeegtddiqgespapcgteepartcpngtkcqpyWEGPNNGITQFDNILFAVLTVFQCITMEGWTDLLYNSNDASG 423
Cdd:pfam00520 156 KT------------------------------------WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG 199
|
250 260 270
....*....|....*....|....*....|....*....
gi 568955973 424 NTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE 462
Cdd:pfam00520 200 EFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
579-817 |
7.15e-57 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 197.87 E-value: 7.15e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 579 QAFYWTVLSLVALNTLCVAIVHYNQPEW-LSDFLYYAEFIFLGLFMSEMFIKMYGLG-TRPYFHSSFNCFDCGVIIGSIF 656
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGfKKRYFRSPWNILDFVVVLPSLI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 657 EVIWAVIKPGtsFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDE 736
Cdd:pfam00520 82 SLVLSSVGSL--SGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 737 G--TPPTNFDTFPAAIMTVFQILTGEDWNEVMYDGIKSqggvQGGMVFSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQE 814
Cdd:pfam00520 160 NpdNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDG----KGEFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTE 235
|
...
gi 568955973 815 LTK 817
Cdd:pfam00520 236 RTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1285-1520 |
4.69e-56 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 195.56 E-value: 4.69e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1285 RYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDYVFTGVFTFEMVIKMIDLGLVLHqgaYFRDLWNILDFIVVSG 1364
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVVVLP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1365 ALVAFAFTSSTRGNSkgkdintIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLF 1444
Cdd:pfam00520 79 SLISLVLSSVGSLSG-------LRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLF 151
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568955973 1445 KGKFfhctdeskeferdcrgkyllyeKNEVKARDREWkkyefHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATFE 1520
Cdd:pfam00520 152 GGKL----------------------KTWENPDNGRT-----NFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
|
| Ca_chan_IQ |
pfam08763 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1939-2016 |
8.77e-35 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
:
Pssm-ID: 462591 Cd Length: 77 Bit Score: 128.10 E-value: 8.77e-35
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568955973 1939 NSTLMALIRTALDIKIAKGGaDKQQMDAELRKEMMAIWPNLSQKTLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKA 2016
Cdd:pfam08763 1 TATLFALIRTSLKIKLAPAG-EMDQADAELRKIIKKIWPRLSQKTLDLLVPPPSDDEMTVGKIYAALLIQDYYRQNKA 77
|
|
| GPHH |
pfam16905 |
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in ... |
1876-1929 |
1.64e-28 |
|
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in this short domain on voltage-dependent L-type calcium channel proteins in eukaryotes. The domain is closely associated with the IQ-domain, pfam08763.
:
Pssm-ID: 465306 Cd Length: 54 Bit Score: 109.66 E-value: 1.64e-28
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 568955973 1876 EYVRVWAEYDPAAWGRMPYPDMYQMLRHMSPPLGLGKKCPARVAYKRLLRMDLP 1929
Cdd:pfam16905 1 EFVRVWAEYDPAATGRISYQDMYELLRRISPPLGFGKKCPARVAYKRLVRMNMP 54
|
|
| PHA03307 super family |
cl33723 |
transcriptional regulator ICP4; Provisional |
2044-2458 |
2.31e-10 |
|
transcriptional regulator ICP4; Provisional
The actual alignment was detected with superfamily member PHA03307:
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 66.35 E-value: 2.31e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2044 EGGPSQNALPSTQLDPGGGLMAHEGGMKESPSWVtqrAQEMFQKTGTWSPERGPPIDMPNSQPNSQSVEMREMGTDGYSd 2123
Cdd:PHA03307 16 EGGEFFPRPPATPGDAADDLLSGSQGQLVSDSAE---LAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWS- 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2124 sehylpmEGQTRAASMPRLPAENQRRRGRPRGNDlSTISDTSPMKRSASVLGPKARRldDYSLERVPPEENQRYH-QRRR 2202
Cdd:PHA03307 92 -------LSTLAPASPAREGSPTPPGPSSPDPPP-PTPPPASPPPSPAPDLSEMLRP--VGSPGPPPAASPPAAGaSPAA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2203 DRGHRTSERSLGRYTDVDtglgtdlSMTTQSGDLPSKDR--DQDRGRPKDRkhrphhhhHHHHHHPPAPDRDRYAQERPD 2280
Cdd:PHA03307 162 VASDAASSRQAALPLSSP-------EETARAPSSPPAEPppSTPPAAASPR--------PPRRSSPISASASSPAPAPGR 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2281 TGRARAREQRWSRSPSEGREhtthrQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSYSPAPRRPaarrmAGP 2360
Cdd:PHA03307 227 SAADDAGASSSDSSSSESSG-----CGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRE-----RSP 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2361 AAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPRE-----PPGGAHDPAPRSPRTPRAAGCASPR---HGRRLPN 2432
Cdd:PHA03307 297 SPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSrgaavSPGPSPSRSPSPSRPPPPADPSSPRkrpRPSRAPS 376
|
410 420
....*....|....*....|....*.
gi 568955973 2433 GYYAGHGAPRPRTARRGAHDAYSESE 2458
Cdd:PHA03307 377 SPAASAGRPTRRRARAAVAGRARRRD 402
|
|
| PHA03247 super family |
cl33720 |
large tegument protein UL36; Provisional |
895-1277 |
5.71e-05 |
|
large tegument protein UL36; Provisional
The actual alignment was detected with superfamily member PHA03247:
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.78 E-value: 5.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 895 PTPYARPLRPDVKTHLDRPlVVDPQENR-------NNNTNKSRAPEALRP-TARPRESARDPDARRAWPGSPERAPGREG 966
Cdd:PHA03247 2571 PRPAPRPSEPAVTSRARRP-DAPPQSARprapvddRGDPRGPAPPSPLPPdTHAPDPPPPSPSPAANEPDPHPPPTVPPP 2649
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 967 PYGRESEPQQREHAPPREHAPWDAdterAKAGDAPRRHTHR---------------PVAEGEPRRHRARRRPGDEPDDRP 1031
Cdd:PHA03247 2650 ERPRDDPAPGRVSRPRRARRLGRA----AQASSPPQRPRRRaarptvgsltsladpPPPPPTPEPAPHALVSATPLPPGP 2725
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1032 ERRPRPRDATR-----PARAADGEGDDGERKRRHRH---GPPAHDDrerrhrrrkenqgSGVPVSGPNLSTTRPIQQDLG 1103
Cdd:PHA03247 2726 AAARQASPALPaapapPAVPAGPATPGGPARPARPPttaGPPAPAP-------------PAAPAAGPPRRLTRPAVASLS 2792
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1104 --RQDLPLAEDLDNMKNNKL------------ATGEP----ASPHDSLGHSGLPPSPAKIGNSTNPG------------- 1152
Cdd:PHA03247 2793 esRESLPSPWDPADPPAAVLapaaalppaaspAGPLPpptsAQPTAPPPPPGPPPPSLPLGGSVAPGgdvrrrppsrspa 2872
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1153 --PALATNP------QNAASRRTPNNPGNPSNPGPPKTPenslivtnPSSTQPNSAKTARKPEHMAVEIPPacPPLNHTV 1224
Cdd:PHA03247 2873 akPAAPARPpvrrlaRPAVSRSTESFALPPDQPERPPQP--------QAPPPPQPQPQPPPPPQPQPPPPP--PPRPQPP 2942
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 568955973 1225 VQVNKNANPDPLPKKEEEKKEEEEADPGEDG------PKPMPPYSSMfiLSTTNPLRRL 1277
Cdd:PHA03247 2943 LAPTTDPAGAGEPSGAVPQPWLGALVPGRVAvprfrvPQPAPSREAP--ASSTPPLTGH 2999
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1610-1867 |
2.47e-71 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 239.48 E-value: 2.47e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1610 SPPFEYTIMAMIALNTIVLMMKFYGAS-VAYENALRVFNIVFTSLFSLECVLKVMAFGI-LNYFRDAWNIFDFVTVLGSI 1687
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPeEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1688 TDILVTEFGNnFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIDGE 1767
Cdd:pfam00520 81 ISLVLSSVGS-LSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1768 DedsdedefQITEHNNFRTFFQALMLLFRSATGEAWHNIMLSCLSGKpcdknsgiltadcGNEFAYFYFVSFIFLCSFLM 1847
Cdd:pfam00520 160 N--------PDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGK-------------GEFWAYIYFVSFIILGGFLL 218
|
250 260
....*....|....*....|
gi 568955973 1848 LNLFVAVIMDNFEYLTRDSS 1867
Cdd:pfam00520 219 LNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
188-462 |
6.01e-68 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 229.46 E-value: 6.01e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 188 WPPFEYMILATIIANCIVLALEQHLPDDDKTPmsERLDDTEPYFIGIFCFEAGIKIVALGFAFHkgsYLRNGWNVMDFVV 267
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEPLT--TVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 268 VLTGILATVGTE----FDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGKF 343
Cdd:pfam00520 76 VLPSLISLVLSSvgslSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 344 HTtcfeegtddiqgespapcgteepartcpngtkcqpyWEGPNNGITQFDNILFAVLTVFQCITMEGWTDLLYNSNDASG 423
Cdd:pfam00520 156 KT------------------------------------WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG 199
|
250 260 270
....*....|....*....|....*....|....*....
gi 568955973 424 NTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE 462
Cdd:pfam00520 200 EFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
579-817 |
7.15e-57 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 197.87 E-value: 7.15e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 579 QAFYWTVLSLVALNTLCVAIVHYNQPEW-LSDFLYYAEFIFLGLFMSEMFIKMYGLG-TRPYFHSSFNCFDCGVIIGSIF 656
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGfKKRYFRSPWNILDFVVVLPSLI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 657 EVIWAVIKPGtsFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDE 736
Cdd:pfam00520 82 SLVLSSVGSL--SGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 737 G--TPPTNFDTFPAAIMTVFQILTGEDWNEVMYDGIKSqggvQGGMVFSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQE 814
Cdd:pfam00520 160 NpdNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDG----KGEFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTE 235
|
...
gi 568955973 815 LTK 817
Cdd:pfam00520 236 RTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1285-1520 |
4.69e-56 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 195.56 E-value: 4.69e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1285 RYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDYVFTGVFTFEMVIKMIDLGLVLHqgaYFRDLWNILDFIVVSG 1364
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVVVLP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1365 ALVAFAFTSSTRGNSkgkdintIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLF 1444
Cdd:pfam00520 79 SLISLVLSSVGSLSG-------LRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLF 151
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568955973 1445 KGKFfhctdeskeferdcrgkyllyeKNEVKARDREWkkyefHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATFE 1520
Cdd:pfam00520 152 GGKL----------------------KTWENPDNGRT-----NFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
|
| Ca_chan_IQ |
pfam08763 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1939-2016 |
8.77e-35 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 462591 Cd Length: 77 Bit Score: 128.10 E-value: 8.77e-35
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568955973 1939 NSTLMALIRTALDIKIAKGGaDKQQMDAELRKEMMAIWPNLSQKTLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKA 2016
Cdd:pfam08763 1 TATLFALIRTSLKIKLAPAG-EMDQADAELRKIIKKIWPRLSQKTLDLLVPPPSDDEMTVGKIYAALLIQDYYRQNKA 77
|
|
| GPHH |
pfam16905 |
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in ... |
1876-1929 |
1.64e-28 |
|
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in this short domain on voltage-dependent L-type calcium channel proteins in eukaryotes. The domain is closely associated with the IQ-domain, pfam08763.
Pssm-ID: 465306 Cd Length: 54 Bit Score: 109.66 E-value: 1.64e-28
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 568955973 1876 EYVRVWAEYDPAAWGRMPYPDMYQMLRHMSPPLGLGKKCPARVAYKRLLRMDLP 1929
Cdd:pfam16905 1 EFVRVWAEYDPAATGRISYQDMYELLRRISPPLGFGKKCPARVAYKRLVRMNMP 54
|
|
| Ca_chan_IQ |
smart01062 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1994-2024 |
9.97e-11 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 198130 Cd Length: 31 Bit Score: 58.39 E-value: 9.97e-11
10 20 30
....*....|....*....|....*....|.
gi 568955973 1994 TDLTVGKIYAAMMIMEYYRQSKAKKLQAMRE 2024
Cdd:smart01062 1 DELTVGKIYAAMLIQDYFRQFKSRKEQELLG 31
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2044-2458 |
2.31e-10 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 66.35 E-value: 2.31e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2044 EGGPSQNALPSTQLDPGGGLMAHEGGMKESPSWVtqrAQEMFQKTGTWSPERGPPIDMPNSQPNSQSVEMREMGTDGYSd 2123
Cdd:PHA03307 16 EGGEFFPRPPATPGDAADDLLSGSQGQLVSDSAE---LAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWS- 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2124 sehylpmEGQTRAASMPRLPAENQRRRGRPRGNDlSTISDTSPMKRSASVLGPKARRldDYSLERVPPEENQRYH-QRRR 2202
Cdd:PHA03307 92 -------LSTLAPASPAREGSPTPPGPSSPDPPP-PTPPPASPPPSPAPDLSEMLRP--VGSPGPPPAASPPAAGaSPAA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2203 DRGHRTSERSLGRYTDVDtglgtdlSMTTQSGDLPSKDR--DQDRGRPKDRkhrphhhhHHHHHHPPAPDRDRYAQERPD 2280
Cdd:PHA03307 162 VASDAASSRQAALPLSSP-------EETARAPSSPPAEPppSTPPAAASPR--------PPRRSSPISASASSPAPAPGR 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2281 TGRARAREQRWSRSPSEGREhtthrQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSYSPAPRRPaarrmAGP 2360
Cdd:PHA03307 227 SAADDAGASSSDSSSSESSG-----CGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRE-----RSP 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2361 AAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPRE-----PPGGAHDPAPRSPRTPRAAGCASPR---HGRRLPN 2432
Cdd:PHA03307 297 SPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSrgaavSPGPSPSRSPSPSRPPPPADPSSPRkrpRPSRAPS 376
|
410 420
....*....|....*....|....*.
gi 568955973 2433 GYYAGHGAPRPRTARRGAHDAYSESE 2458
Cdd:PHA03307 377 SPAASAGRPTRRRARAAVAGRARRRD 402
|
|
| PBP1 |
COG5180 |
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ... |
2034-2450 |
4.52e-07 |
|
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];
Pssm-ID: 444064 [Multi-domain] Cd Length: 548 Bit Score: 55.07 E-value: 4.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2034 QRMEPPSPTQEGG-PSQNALPSTQLDPGGGLMAHEGGMKESPSWV------TQRAQEMFQKTGTWSPERGPPidmpnSQP 2106
Cdd:COG5180 14 TVPIPPNAARPVLsPELWAAANNDAVSQGDRSALASSPTRPYARKifepldIKLALGKPQLPSVAEPEAYLD-----PAP 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2107 NSQSVEMREMGTDGYSDSehylpMEGQTRAASMPRLPAENQRRRGRPRgnDLSTISDTSPMKRSASVlgpkaRRLDDYSL 2186
Cdd:COG5180 89 PKSSPDTPEEQLGAPAGD-----LLVLPAAKTPELAAGALPAPAAAAA--LPKAKVTREATSASAGV-----ALAAALLQ 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2187 ERVPPEEnqryhQRRRDRGHRTSERSLGRYTDVDTG-LGTDLSMTTQSGDLPSKDRDQDRGRPKDrkhRPHHHHHHHHHH 2265
Cdd:COG5180 157 RSDPILA-----KDPDGDSASTLPPPAEKLDKVLTEpRDALKDSPEKLDRPKVEVKDEAQEEPPD---LTGGADHPRPEA 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2266 PPAPDRDRYAQERPDTGRARAREQRWSRSPSEGREhtthrqgSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSY 2345
Cdd:COG5180 229 ASSPKVDPPSTSEARSRPATVDAQPEMRPPADAKE-------RRRAAIGDTPAAEPPGLPVLEAGSEPQSDAPEAETARP 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2346 SPAPRRPAARRMAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPREPPGGAHDPAPRSPRTPRAA------ 2419
Cdd:COG5180 302 IDVKGVASAPPATRPVRPPGGARDPGTPRPGQPTERPAGVPEAASDAGQPPSAYPPAEEAVPGKPLEQGAPRPGssggdg 381
|
410 420 430
....*....|....*....|....*....|....*...
gi 568955973 2420 -------GCASPRHGRRLPNGYYAGHGAPRPRTARRGA 2450
Cdd:COG5180 382 apfqppnGAPQPGLGRRGAPGPPMGAGDLVQAALDGGG 419
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
895-1277 |
5.71e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.78 E-value: 5.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 895 PTPYARPLRPDVKTHLDRPlVVDPQENR-------NNNTNKSRAPEALRP-TARPRESARDPDARRAWPGSPERAPGREG 966
Cdd:PHA03247 2571 PRPAPRPSEPAVTSRARRP-DAPPQSARprapvddRGDPRGPAPPSPLPPdTHAPDPPPPSPSPAANEPDPHPPPTVPPP 2649
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 967 PYGRESEPQQREHAPPREHAPWDAdterAKAGDAPRRHTHR---------------PVAEGEPRRHRARRRPGDEPDDRP 1031
Cdd:PHA03247 2650 ERPRDDPAPGRVSRPRRARRLGRA----AQASSPPQRPRRRaarptvgsltsladpPPPPPTPEPAPHALVSATPLPPGP 2725
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1032 ERRPRPRDATR-----PARAADGEGDDGERKRRHRH---GPPAHDDrerrhrrrkenqgSGVPVSGPNLSTTRPIQQDLG 1103
Cdd:PHA03247 2726 AAARQASPALPaapapPAVPAGPATPGGPARPARPPttaGPPAPAP-------------PAAPAAGPPRRLTRPAVASLS 2792
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1104 --RQDLPLAEDLDNMKNNKL------------ATGEP----ASPHDSLGHSGLPPSPAKIGNSTNPG------------- 1152
Cdd:PHA03247 2793 esRESLPSPWDPADPPAAVLapaaalppaaspAGPLPpptsAQPTAPPPPPGPPPPSLPLGGSVAPGgdvrrrppsrspa 2872
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1153 --PALATNP------QNAASRRTPNNPGNPSNPGPPKTPenslivtnPSSTQPNSAKTARKPEHMAVEIPPacPPLNHTV 1224
Cdd:PHA03247 2873 akPAAPARPpvrrlaRPAVSRSTESFALPPDQPERPPQP--------QAPPPPQPQPQPPPPPQPQPPPPP--PPRPQPP 2942
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 568955973 1225 VQVNKNANPDPLPKKEEEKKEEEEADPGEDG------PKPMPPYSSMfiLSTTNPLRRL 1277
Cdd:PHA03247 2943 LAPTTDPAGAGEPSGAVPQPWLGALVPGRVAvprfrvPQPAPSREAP--ASSTPPLTGH 2999
|
|
| Pro-rich |
pfam15240 |
Proline-rich protein; This family includes several eukaryotic proline-rich proteins. |
2294-2443 |
1.07e-04 |
|
Proline-rich protein; This family includes several eukaryotic proline-rich proteins.
Pssm-ID: 464580 [Multi-domain] Cd Length: 167 Bit Score: 45.03 E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2294 SPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRRGrrqlPQTPCTPRPLVSyspaprrpaarrMAGPAAPPGGSPRGcrR 2373
Cdd:pfam15240 15 SAQSSSEDVSQEDSPSLISEEEGQSQQGGQGPQGP----PPGGFPPQPPAS------------DDPPGPPPPGGPQQ--P 76
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2374 APRWPAHAPEGPRPRGADYTEPDSPREPPGGAHDPAPRSPRTPRAAGcaSPRHGRRLPNGYYAGHGAPRP 2443
Cdd:pfam15240 77 PPQGGKQKPQGPPPQGGPRPPPGKPQGPPPQGGNQQQGPPPPGKPQG--PPPQGGGPPPQGGNQQGPPPP 144
|
|
| PLN03223 |
PLN03223 |
Polycystin cation channel protein; Provisional |
721-814 |
9.51e-03 |
|
Polycystin cation channel protein; Provisional
Pssm-ID: 215637 [Multi-domain] Cd Length: 1634 Bit Score: 41.47 E-value: 9.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 721 ALLGMQLFGGQFnfdegtppTNFDTFPAAIMTVFQILTGeDWNEVMYDgIKSQGGVQGgMVFSIYFIVLTLFGNYTLLNV 800
Cdd:PLN03223 1345 AFIGHVIFGNAS--------VHFSDMTDSINSLFENLLG-DITYFNED-LKNLTGLQF-VVGMIYFYSYNIFVFMILFNF 1413
|
90
....*....|....*...
gi 568955973 801 FLAIAVDNL----ANAQE 814
Cdd:PLN03223 1414 LLAIICDAFgevkANAAE 1431
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1610-1867 |
2.47e-71 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 239.48 E-value: 2.47e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1610 SPPFEYTIMAMIALNTIVLMMKFYGAS-VAYENALRVFNIVFTSLFSLECVLKVMAFGI-LNYFRDAWNIFDFVTVLGSI 1687
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPeEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1688 TDILVTEFGNnFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIDGE 1767
Cdd:pfam00520 81 ISLVLSSVGS-LSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1768 DedsdedefQITEHNNFRTFFQALMLLFRSATGEAWHNIMLSCLSGKpcdknsgiltadcGNEFAYFYFVSFIFLCSFLM 1847
Cdd:pfam00520 160 N--------PDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGK-------------GEFWAYIYFVSFIILGGFLL 218
|
250 260
....*....|....*....|
gi 568955973 1848 LNLFVAVIMDNFEYLTRDSS 1867
Cdd:pfam00520 219 LNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
188-462 |
6.01e-68 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 229.46 E-value: 6.01e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 188 WPPFEYMILATIIANCIVLALEQHLPDDDKTPmsERLDDTEPYFIGIFCFEAGIKIVALGFAFHkgsYLRNGWNVMDFVV 267
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEPLT--TVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 268 VLTGILATVGTE----FDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGKF 343
Cdd:pfam00520 76 VLPSLISLVLSSvgslSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 344 HTtcfeegtddiqgespapcgteepartcpngtkcqpyWEGPNNGITQFDNILFAVLTVFQCITMEGWTDLLYNSNDASG 423
Cdd:pfam00520 156 KT------------------------------------WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG 199
|
250 260 270
....*....|....*....|....*....|....*....
gi 568955973 424 NTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE 462
Cdd:pfam00520 200 EFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
579-817 |
7.15e-57 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 197.87 E-value: 7.15e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 579 QAFYWTVLSLVALNTLCVAIVHYNQPEW-LSDFLYYAEFIFLGLFMSEMFIKMYGLG-TRPYFHSSFNCFDCGVIIGSIF 656
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGfKKRYFRSPWNILDFVVVLPSLI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 657 EVIWAVIKPGtsFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDE 736
Cdd:pfam00520 82 SLVLSSVGSL--SGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 737 G--TPPTNFDTFPAAIMTVFQILTGEDWNEVMYDGIKSqggvQGGMVFSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQE 814
Cdd:pfam00520 160 NpdNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDG----KGEFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTE 235
|
...
gi 568955973 815 LTK 817
Cdd:pfam00520 236 RTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1285-1520 |
4.69e-56 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 195.56 E-value: 4.69e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1285 RYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDYVFTGVFTFEMVIKMIDLGLVLHqgaYFRDLWNILDFIVVSG 1364
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVVVLP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1365 ALVAFAFTSSTRGNSkgkdintIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLF 1444
Cdd:pfam00520 79 SLISLVLSSVGSLSG-------LRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLF 151
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568955973 1445 KGKFfhctdeskeferdcrgkyllyeKNEVKARDREWkkyefHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATFE 1520
Cdd:pfam00520 152 GGKL----------------------KTWENPDNGRT-----NFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
|
| Ca_chan_IQ |
pfam08763 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1939-2016 |
8.77e-35 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 462591 Cd Length: 77 Bit Score: 128.10 E-value: 8.77e-35
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568955973 1939 NSTLMALIRTALDIKIAKGGaDKQQMDAELRKEMMAIWPNLSQKTLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKA 2016
Cdd:pfam08763 1 TATLFALIRTSLKIKLAPAG-EMDQADAELRKIIKKIWPRLSQKTLDLLVPPPSDDEMTVGKIYAALLIQDYYRQNKA 77
|
|
| GPHH |
pfam16905 |
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in ... |
1876-1929 |
1.64e-28 |
|
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in this short domain on voltage-dependent L-type calcium channel proteins in eukaryotes. The domain is closely associated with the IQ-domain, pfam08763.
Pssm-ID: 465306 Cd Length: 54 Bit Score: 109.66 E-value: 1.64e-28
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 568955973 1876 EYVRVWAEYDPAAWGRMPYPDMYQMLRHMSPPLGLGKKCPARVAYKRLLRMDLP 1929
Cdd:pfam16905 1 EFVRVWAEYDPAATGRISYQDMYELLRRISPPLGFGKKCPARVAYKRLVRMNMP 54
|
|
| Ca_chan_IQ |
smart01062 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1994-2024 |
9.97e-11 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 198130 Cd Length: 31 Bit Score: 58.39 E-value: 9.97e-11
10 20 30
....*....|....*....|....*....|.
gi 568955973 1994 TDLTVGKIYAAMMIMEYYRQSKAKKLQAMRE 2024
Cdd:smart01062 1 DELTVGKIYAAMLIQDYFRQFKSRKEQELLG 31
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2044-2458 |
2.31e-10 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 66.35 E-value: 2.31e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2044 EGGPSQNALPSTQLDPGGGLMAHEGGMKESPSWVtqrAQEMFQKTGTWSPERGPPIDMPNSQPNSQSVEMREMGTDGYSd 2123
Cdd:PHA03307 16 EGGEFFPRPPATPGDAADDLLSGSQGQLVSDSAE---LAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWS- 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2124 sehylpmEGQTRAASMPRLPAENQRRRGRPRGNDlSTISDTSPMKRSASVLGPKARRldDYSLERVPPEENQRYH-QRRR 2202
Cdd:PHA03307 92 -------LSTLAPASPAREGSPTPPGPSSPDPPP-PTPPPASPPPSPAPDLSEMLRP--VGSPGPPPAASPPAAGaSPAA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2203 DRGHRTSERSLGRYTDVDtglgtdlSMTTQSGDLPSKDR--DQDRGRPKDRkhrphhhhHHHHHHPPAPDRDRYAQERPD 2280
Cdd:PHA03307 162 VASDAASSRQAALPLSSP-------EETARAPSSPPAEPppSTPPAAASPR--------PPRRSSPISASASSPAPAPGR 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2281 TGRARAREQRWSRSPSEGREhtthrQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSYSPAPRRPaarrmAGP 2360
Cdd:PHA03307 227 SAADDAGASSSDSSSSESSG-----CGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRE-----RSP 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2361 AAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPRE-----PPGGAHDPAPRSPRTPRAAGCASPR---HGRRLPN 2432
Cdd:PHA03307 297 SPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSrgaavSPGPSPSRSPSPSRPPPPADPSSPRkrpRPSRAPS 376
|
410 420
....*....|....*....|....*.
gi 568955973 2433 GYYAGHGAPRPRTARRGAHDAYSESE 2458
Cdd:PHA03307 377 SPAASAGRPTRRRARAAVAGRARRRD 402
|
|
| PKD_channel |
pfam08016 |
Polycystin cation channel; This family contains the cation channel region from group II of ... |
1649-1860 |
6.02e-10 |
|
Polycystin cation channel; This family contains the cation channel region from group II of Transient receptor potential (TRP) channels, the TRPP subfamily, including PKD1, PKD2, PKD2L and mucolipin proteins.
Pssm-ID: 462341 [Multi-domain] Cd Length: 225 Bit Score: 61.52 E-value: 6.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1649 VFTSLFSLECVLKVMAFGiLNYFRDAWNIFDFVTVLGSITDILvtefgnnfinLSFLRLFRAARLIKLLRQ--------- 1719
Cdd:pfam08016 19 VFFLYFVVEEILKIRKHR-PSYLRSVWNLLDLAIVILSVVLIV----------LNIYRDFLADRLIKSVEAspvtfidfd 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1720 -----GYTIRIL-----------LWTFVQSFK-----------ALPYVC---LLIAMLFFIYAIIGMQVFGNigidgede 1769
Cdd:pfam08016 88 rvaqlDNLYRIIlaflvfltwlkLFKVLRFNKtmslftktlsrAWKDLAgfaLMFVIFFFAYAQFGYLLFGT-------- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1770 dsdedefqitEHNNFRTFFQALMLLFRSATG-EAWHNImlsclsgKPCDKNSGILtadcgnefayfYFVSFIFLCSFLML 1848
Cdd:pfam08016 160 ----------QAPNFSNFVKSILTLFRTILGdFGYNEI-------FSGNRVLGPL-----------LFLTFVFLVIFILL 211
|
250
....*....|..
gi 568955973 1849 NLFVAVIMDNFE 1860
Cdd:pfam08016 212 NLFLAIINDSYV 223
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2039-2443 |
4.51e-08 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 59.03 E-value: 4.51e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2039 PSPTQEGGPSQNALPSTQLDPGGGLMAHEGGMKESPSW------VTQRAQEMFQKTGTWSPERGPP-IDMPNSQPNSQSV 2111
Cdd:PHA03307 53 VTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWslstlaPASPAREGSPTPPGPSSPDPPPpTPPPASPPPSPAP 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2112 EMREMGTDGYSDSEhylPMEGQTRAASMPRLPAENQRRRGRPRGNDLSTISDTSPMKRSASV-LGPKARRLDDYSLERVP 2190
Cdd:PHA03307 133 DLSEMLRPVGSPGP---PPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAePPPSTPPAAASPRPPRR 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2191 PEENQRYHQRRRDRGHRTSERSLGRYTDVDT---GLGTDLSMTTQSGDlPSKDRDQDRGRPKDRKHRPHHHHHHHHHHPP 2267
Cdd:PHA03307 210 SSPISASASSPAPAPGRSAADDAGASSSDSSsseSSGCGWGPENECPL-PRPAPITLPTRIWEASGWNGPSSRPGPASSS 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2268 APDRDRYAQERPDTGRARAREQRWSRSPSEGREHTThrQGSSSVSGSPAPSTSGTSTPRRGRRqlPQTPCTPRPlvsysp 2347
Cdd:PHA03307 289 SSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRES--SSSSTSSSSESSRGAAVSPGPSPSR--SPSPSRPPP------ 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2348 aprrpaarrmAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPR-GADYTEPDSPREPPGGAhdPAPRSPRTPRAAGCASPRH 2426
Cdd:PHA03307 359 ----------PADPSSPRKRPRPSRAPSSPAASAGRPTRRRaRAAVAGRARRRDATGRF--PAGRPRPSPLDAGAASGAF 426
|
410 420
....*....|....*....|
gi 568955973 2427 GRRLPNGYYAGH---GAPRP 2443
Cdd:PHA03307 427 YARYPLLTPSGEpwpGSPPP 446
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2272-2458 |
3.86e-07 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 55.95 E-value: 3.86e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2272 DRYAQERPDTGRARAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPrrGRRQLPQTPCTPRPlvsyspaprr 2351
Cdd:PHA03307 793 EAAFRRPGRLRRSGPAADAASRTASKRKSRSHTPDGGSESSGPARPPGAAARPP--PARSSESSKSKPAA---------- 860
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2352 paarrmagPAAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPrePPGGAHDPAPRSPRTPRAAGCASPRHG-RRL 2430
Cdd:PHA03307 861 --------AGGRARGKNGRRRPRPPEPRARPGAAAPPKAAAAAPPAG--APAPRPRPAPRVKLGPMPPGGPDPRGGfRRV 930
|
170 180
....*....|....*....|....*...
gi 568955973 2431 PNGYYagHGaPRPRTArrgAHDAYSESE 2458
Cdd:PHA03307 931 PPGDL--HT-PAPSAA---ALAAYCPPE 952
|
|
| PBP1 |
COG5180 |
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ... |
2034-2450 |
4.52e-07 |
|
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];
Pssm-ID: 444064 [Multi-domain] Cd Length: 548 Bit Score: 55.07 E-value: 4.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2034 QRMEPPSPTQEGG-PSQNALPSTQLDPGGGLMAHEGGMKESPSWV------TQRAQEMFQKTGTWSPERGPPidmpnSQP 2106
Cdd:COG5180 14 TVPIPPNAARPVLsPELWAAANNDAVSQGDRSALASSPTRPYARKifepldIKLALGKPQLPSVAEPEAYLD-----PAP 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2107 NSQSVEMREMGTDGYSDSehylpMEGQTRAASMPRLPAENQRRRGRPRgnDLSTISDTSPMKRSASVlgpkaRRLDDYSL 2186
Cdd:COG5180 89 PKSSPDTPEEQLGAPAGD-----LLVLPAAKTPELAAGALPAPAAAAA--LPKAKVTREATSASAGV-----ALAAALLQ 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2187 ERVPPEEnqryhQRRRDRGHRTSERSLGRYTDVDTG-LGTDLSMTTQSGDLPSKDRDQDRGRPKDrkhRPHHHHHHHHHH 2265
Cdd:COG5180 157 RSDPILA-----KDPDGDSASTLPPPAEKLDKVLTEpRDALKDSPEKLDRPKVEVKDEAQEEPPD---LTGGADHPRPEA 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2266 PPAPDRDRYAQERPDTGRARAREQRWSRSPSEGREhtthrqgSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSY 2345
Cdd:COG5180 229 ASSPKVDPPSTSEARSRPATVDAQPEMRPPADAKE-------RRRAAIGDTPAAEPPGLPVLEAGSEPQSDAPEAETARP 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2346 SPAPRRPAARRMAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPREPPGGAHDPAPRSPRTPRAA------ 2419
Cdd:COG5180 302 IDVKGVASAPPATRPVRPPGGARDPGTPRPGQPTERPAGVPEAASDAGQPPSAYPPAEEAVPGKPLEQGAPRPGssggdg 381
|
410 420 430
....*....|....*....|....*....|....*...
gi 568955973 2420 -------GCASPRHGRRLPNGYYAGHGAPRPRTARRGA 2450
Cdd:COG5180 382 apfqppnGAPQPGLGRRGAPGPPMGAGDLVQAALDGGG 419
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2308-2457 |
3.61e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 53.02 E-value: 3.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2308 SSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPlvsyspaPRRPAARRMAGPAAPPGGSPRGCRRAPRWPAHAPEGPRP 2387
Cdd:PHA03247 2544 ASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRP-------SEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSP 2616
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2388 RGADYTEPDSPrePPGGAhdPAPRSPRTPRAAGCASPRHGRRLPngyyAGHGAPRPRTARRGAHDAYSES 2457
Cdd:PHA03247 2617 LPPDTHAPDPP--PPSPS--PAANEPDPHPPPTVPPPERPRDDP----APGRVSRPRRARRLGRAAQASS 2678
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2268-2423 |
3.93e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 52.63 E-value: 3.93e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2268 APDRDRYAQERPDTGRARAREQRWSRSPSEGREHTTHRQGSSsvsgsPAPSTSGTSTPRRGRRQL--------------- 2332
Cdd:PHA03247 2628 PPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARR-----LGRAAQASSPPQRPRRRAarptvgsltsladpp 2702
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2333 --PQTP-CTPRPLVSYSPAPRRPAARRMAGPAAPPGGSPRGCRRAPRWPA-HAPEGPRPRGADYTEPDSPREPPGGahdP 2408
Cdd:PHA03247 2703 ppPPTPePAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGgPARPARPPTTAGPPAPAPPAAPAAG---P 2779
|
170
....*....|....*
gi 568955973 2409 APRSPRTPRAAGCAS 2423
Cdd:PHA03247 2780 PRRLTRPAVASLSES 2794
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2268-2461 |
7.88e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 51.71 E-value: 7.88e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2268 APDRDRYAQERPDTGRARAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPST-SGTSTPRRGRRQLPQTPCTPRPLVSYS 2346
Cdd:PHA03307 79 APANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPaPDLSEMLRPVGSPGPPPAASPPAAGAS 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2347 PAPRRPAARR---------MAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPRG---ADYTEPDSPRePPGGAHDPAPRSP- 2413
Cdd:PHA03307 159 PAAVASDAASsrqaalplsSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSspiSASASSPAPA-PGRSAADDAGASSs 237
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568955973 2414 --RTPRAAGCAS--------PRHGR-RLPNGYYAGHGA--PRPRTARRGAHDAYSESEDDW 2461
Cdd:PHA03307 238 dsSSSESSGCGWgpenecplPRPAPiTLPTRIWEASGWngPSSRPGPASSSSSPRERSPSP 298
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2268-2446 |
1.53e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 50.55 E-value: 1.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2268 APDRDRYAQERPDTGRARAREQRWSRSPsEGREHTTHRQGSSSVSGSPAPSTSGTSTPRrgRRQLPQTPCTPRPLvsysp 2347
Cdd:PHA03307 847 PARSSESSKSKPAAAGGRARGKNGRRRP-RPPEPRARPGAAAPPKAAAAAPPAGAPAPR--PRPAPRVKLGPMPP----- 918
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2348 aprrpaarrmAGPAappggsPRGC-RRAPRWPAHAPEGPRPRGADYTEP-------DSPREPPggAHDPAPRspRTPR-- 2417
Cdd:PHA03307 919 ----------GGPD------PRGGfRRVPPGDLHTPAPSAAALAAYCPPevvaelvDHPLFPE--PWRPALA--FDPEal 978
|
170 180 190
....*....|....*....|....*....|..
gi 568955973 2418 ---AAGCASPRHGRRLPNGYYAGHGAPRPRTA 2446
Cdd:PHA03307 979 aeiAARCGGPPPRSGSAFGPLRASGPLRRRAA 1010
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2278-2461 |
2.97e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 49.60 E-value: 2.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2278 RPDTGRARAREQRWSRSPSEGREHTTHR-QGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSYSPAPRRPAARR 2356
Cdd:PRK07764 587 VVGPAPGAAGGEGPPAPASSGPPEEAARpAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGG 666
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2357 MAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPdSPREPPGGAHDPAPRSPRTPRAAGCASPRHGRRLPNGYYA 2436
Cdd:PRK07764 667 DGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAP-AATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEP 745
|
170 180
....*....|....*....|....*
gi 568955973 2437 GHGAPRPRTARRGAHDAYSESEDDW 2461
Cdd:PRK07764 746 DDPPDPAGAPAQPPPPPAPAPAAAP 770
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
895-1277 |
5.71e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.78 E-value: 5.71e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 895 PTPYARPLRPDVKTHLDRPlVVDPQENR-------NNNTNKSRAPEALRP-TARPRESARDPDARRAWPGSPERAPGREG 966
Cdd:PHA03247 2571 PRPAPRPSEPAVTSRARRP-DAPPQSARprapvddRGDPRGPAPPSPLPPdTHAPDPPPPSPSPAANEPDPHPPPTVPPP 2649
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 967 PYGRESEPQQREHAPPREHAPWDAdterAKAGDAPRRHTHR---------------PVAEGEPRRHRARRRPGDEPDDRP 1031
Cdd:PHA03247 2650 ERPRDDPAPGRVSRPRRARRLGRA----AQASSPPQRPRRRaarptvgsltsladpPPPPPTPEPAPHALVSATPLPPGP 2725
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1032 ERRPRPRDATR-----PARAADGEGDDGERKRRHRH---GPPAHDDrerrhrrrkenqgSGVPVSGPNLSTTRPIQQDLG 1103
Cdd:PHA03247 2726 AAARQASPALPaapapPAVPAGPATPGGPARPARPPttaGPPAPAP-------------PAAPAAGPPRRLTRPAVASLS 2792
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1104 --RQDLPLAEDLDNMKNNKL------------ATGEP----ASPHDSLGHSGLPPSPAKIGNSTNPG------------- 1152
Cdd:PHA03247 2793 esRESLPSPWDPADPPAAVLapaaalppaaspAGPLPpptsAQPTAPPPPPGPPPPSLPLGGSVAPGgdvrrrppsrspa 2872
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1153 --PALATNP------QNAASRRTPNNPGNPSNPGPPKTPenslivtnPSSTQPNSAKTARKPEHMAVEIPPacPPLNHTV 1224
Cdd:PHA03247 2873 akPAAPARPpvrrlaRPAVSRSTESFALPPDQPERPPQP--------QAPPPPQPQPQPPPPPQPQPPPPP--PPRPQPP 2942
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 568955973 1225 VQVNKNANPDPLPKKEEEKKEEEEADPGEDG------PKPMPPYSSMfiLSTTNPLRRL 1277
Cdd:PHA03247 2943 LAPTTDPAGAGEPSGAVPQPWLGALVPGRVAvprfrvPQPAPSREAP--ASSTPPLTGH 2999
|
|
| PHA03381 |
PHA03381 |
tegument protein VP22; Provisional |
2293-2429 |
6.75e-05 |
|
tegument protein VP22; Provisional
Pssm-ID: 177618 [Multi-domain] Cd Length: 290 Bit Score: 47.31 E-value: 6.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2293 RSPSEgREHTTHRQGS----SSVSGSPAPSTSGTSTPR-RGRRQLPQTPCTPRPLVSYSPAPRRPAARRMAGPAAPPGGS 2367
Cdd:PHA03381 5 RSPRP-KPHGTDEVEAdvyyDFISPDASPARVSFEEPAdRARRGAGQARGRSQAERRFHHYDEARADYPYYTGSSSEDER 83
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568955973 2368 PRGCRRaPRWPAHAPEGPRP---RGAdyTEPDSPREPPGGAHDPAPRSPRTPRAagcASPRHGRR 2429
Cdd:PHA03381 84 PADPRP-SRRPHAQPEASGPgpaRGA--RGPAGSRGRGRRAESPSPRDPPNPKG---ASAPRGRK 142
|
|
| Pro-rich |
pfam15240 |
Proline-rich protein; This family includes several eukaryotic proline-rich proteins. |
2294-2443 |
1.07e-04 |
|
Proline-rich protein; This family includes several eukaryotic proline-rich proteins.
Pssm-ID: 464580 [Multi-domain] Cd Length: 167 Bit Score: 45.03 E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2294 SPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRRGrrqlPQTPCTPRPLVSyspaprrpaarrMAGPAAPPGGSPRGcrR 2373
Cdd:pfam15240 15 SAQSSSEDVSQEDSPSLISEEEGQSQQGGQGPQGP----PPGGFPPQPPAS------------DDPPGPPPPGGPQQ--P 76
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2374 APRWPAHAPEGPRPRGADYTEPDSPREPPGGAHDPAPRSPRTPRAAGcaSPRHGRRLPNGYYAGHGAPRP 2443
Cdd:pfam15240 77 PPQGGKQKPQGPPPQGGPRPPPGKPQGPPPQGGNQQQGPPPPGKPQG--PPPQGGGPPPQGGNQQGPPPP 144
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
871-1063 |
1.07e-04 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 47.59 E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 871 TSEMRKQNLLAS-REALYG---DAAERWPTPYARPLRPDVKTHLDRPLVVDPQENRnnNTNKSRAPEALRPTARPRESAR 946
Cdd:PRK12678 43 TSGMRKGELIAAiKEARGGgaaAAAATPAAPAAAARRAARAAAAARQAEQPAAEAA--AAKAEAAPAARAAAAAAAEAAS 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 947 DPDARRAWPGSPERAPGREGPYGRESEPQQREHAPPREHApwDADTERAKAGDAPRRHTHRPVAEGEPrrhrarrRPGDE 1026
Cdd:PRK12678 121 APEAAQARERRERGEAARRGAARKAGEGGEQPATEARADA--AERTEEEERDERRRRGDREDRQAEAE-------RGERG 191
|
170 180 190
....*....|....*....|....*....|....*..
gi 568955973 1027 PDDRPERRPRPRDATRPARAADGEGDDGERKRRHRHG 1063
Cdd:PRK12678 192 RREERGRDGDDRDRRDRREQGDRREERGRRDGGDRRG 228
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2278-2448 |
1.11e-04 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 47.86 E-value: 1.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2278 RPDTGRARAREQRWS------RSPSE--------GREHTTHRQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPL- 2342
Cdd:PHA03307 738 RYSPRRARARASAWDitdalfSNPSLvpaklaeaLALLEPAEPQRGAGSSPPVRAEAAFRRPGRLRRSGPAADAASRTAs 817
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2343 VSYSPAPRRPAARRMAGPAAPPG--GSPRGCRRAP-RWPAHAPEGPRPRGADYTEPDSPREP---------PGGAHDPAP 2410
Cdd:PHA03307 818 KRKSRSHTPDGGSESSGPARPPGaaARPPPARSSEsSKSKPAAAGGRARGKNGRRRPRPPEPrarpgaaapPKAAAAAPP 897
|
170 180 190
....*....|....*....|....*....|....*...
gi 568955973 2411 RSPRTPRAAGCASPRHGRRLPNGyyaghgaPRPRTARR 2448
Cdd:PHA03307 898 AGAPAPRPRPAPRVKLGPMPPGG-------PDPRGGFR 928
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
2317-2450 |
5.10e-04 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 45.44 E-value: 5.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2317 PSTSGTSTPRR-----GRRQLPqtPCTPRPlvsyspaprrpaarrMAGPAAPPGGS--PRGCRRAPRWPAHAPEGPRPRG 2389
Cdd:PHA03378 676 PSPTGANTMLPiqwapGTMQPP--PRAPTP---------------MRPPAAPPGRAqrPAAATGRARPPAAAPGRARPPA 738
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568955973 2390 ADYTEPDSPREPPGGAHDP--APRSPRTPRAA-GCASPRHGRRLPngyyaghgaPRPRTARRGA 2450
Cdd:PHA03378 739 AAPGRARPPAAAPGRARPPaaAPGRARPPAAApGAPTPQPPPQAP---------PAPQQRPRGA 793
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2357-2458 |
6.35e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 45.36 E-value: 6.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2357 MAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPRGADytePDSPREPPGGAHDPAPRSPRTPRAAGCASPRHGRRLPNGyyA 2436
Cdd:PRK07764 387 VAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAA---APAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAA--A 461
|
90 100
....*....|....*....|..
gi 568955973 2437 GHGAPRPRTARRGAHDAYSESE 2458
Cdd:PRK07764 462 PSAQPAPAPAAAPEPTAAPAPA 483
|
|
| PHA03381 |
PHA03381 |
tegument protein VP22; Provisional |
2357-2450 |
9.98e-04 |
|
tegument protein VP22; Provisional
Pssm-ID: 177618 [Multi-domain] Cd Length: 290 Bit Score: 43.85 E-value: 9.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2357 MAGPAAPPGGSPRGCRRAPRWPAHA-PEGPR------PRGADY-------TEPDSPREPP--------GGAHDP----AP 2410
Cdd:PHA03381 29 DASPARVSFEEPADRARRGAGQARGrSQAERrfhhydEARADYpyytgssSEDERPADPRpsrrphaqPEASGPgparGA 108
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 568955973 2411 RSPRTPRAAGCASPRHGRRLPNgyyAGHGAPRPRtARRGA 2450
Cdd:PHA03381 109 RGPAGSRGRGRRAESPSPRDPP---NPKGASAPR-GRKSA 144
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2268-2425 |
1.20e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.21 E-value: 1.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2268 APDRDRYAQERPDTGRARAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRRGRRQ-LPQTPCTPRPLVSYS 2346
Cdd:PRK07764 635 APAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPaQPAPAPAATPPAGQA 714
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568955973 2347 PAPRRPAARRMAGPAAPPGGSPRGcrraPRWPAHAPEGPRPRGADYTEPDSPREPPGGAhdPAPRSPRTPRAAGCASPR 2425
Cdd:PRK07764 715 DDPAAQPPQAAQGASAPSPAADDP----VPLPPEPDDPPDPAGAPAQPPPPPAPAPAAA--PAAAPPPSPPSEEEEMAE 787
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2358-2450 |
2.22e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.44 E-value: 2.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2358 AGPAAPPGGSPRGCRRAPRWPAHAPE---GPRPRGADYTEPDSPREPPGGAHDPAPRSPRTPRAAGCASP-RHGRRLPNG 2433
Cdd:PRK07764 405 APAAAPAPAAAAPAAAAAPAPAAAPQpapAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPePTAAPAPAP 484
|
90
....*....|....*..
gi 568955973 2434 YYAGHGAPRPRTARRGA 2450
Cdd:PRK07764 485 PAAPAPAAAPAAPAAPA 501
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
880-1265 |
3.07e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.00 E-value: 3.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 880 LASREAlyGDAAERWPtPYARPLRPDVKTHLDRPlvvdpqenrnnntnksrAPEALRPTARPREsaRDPDARrAWPGSPe 959
Cdd:PHA03247 2543 LASDDA--GDPPPPLP-PAAPPAAPDRSVPPPRP-----------------APRPSEPAVTSRA--RRPDAP-PQSARP- 2598
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 960 RAPGreGPYGRESEPQQREHAPPREHAPWDADTERAKAGDAPrrhthrpvaeGEPRRHRARRRPGDEPDDRPERRPRPRD 1039
Cdd:PHA03247 2599 RAPV--DDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEP----------DPHPPPTVPPPERPRDDPAPGRVSRPRR 2666
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1040 ATRPARAADGEGDdgERKRRHRHGPPAHddrerrhrrrkenqgsgvpvsGPNLSTTRPIQQDlgrqdlplaedldnmknn 1119
Cdd:PHA03247 2667 ARRLGRAAQASSP--PQRPRRRAARPTV---------------------GSLTSLADPPPPP------------------ 2705
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 1120 klATGEPAsPHDSLGHSGLPPSPAKIGNSTNPGPALATNPQNAASRRTPNNPGNPSNPGPPKTPENSLIVTNPSSTQPns 1199
Cdd:PHA03247 2706 --PTPEPA-PHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPP-- 2780
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568955973 1200 AKTARKPEHMAVEIPPACP----PLNHTVVQVNKNA--NPDPLPKKEEEKKEEEEADPGEDGPKPMPPYSSM 1265
Cdd:PHA03247 2781 RRLTRPAVASLSESRESLPspwdPADPPAAVLAPAAalPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPL 2852
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2358-2450 |
3.25e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.05 E-value: 3.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2358 AGPAAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPREPPGGAHDPAPRSPRTPRAAGcASPRHGRRLPNGYYAG 2437
Cdd:PRK07764 586 AVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVA-APEHHPKHVAVPDASD 664
|
90
....*....|...
gi 568955973 2438 HGAPRPRTARRGA 2450
Cdd:PRK07764 665 GGDGWPAKAGGAA 677
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2248-2449 |
3.95e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.00 E-value: 3.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2248 PKDRKHRPHHHHHHHHHHPPAPDRDRYAQ-----ERPDTGRARAREQRWSrSPSEGREHTTHRQGSSSVSGS-------- 2314
Cdd:PHA03247 2628 PPSPSPAANEPDPHPPPTVPPPERPRDDPapgrvSRPRRARRLGRAAQAS-SPPQRPRRRAARPTVGSLTSLadpppppp 2706
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2315 -----PAPSTSGTSTP---RRGRRQLPQTPCTPRP------LVSYSPAPRRPAARRMAG------PAAPPGGSPRGCRRA 2374
Cdd:PHA03247 2707 tpepaPHALVSATPLPpgpAAARQASPALPAAPAPpavpagPATPGGPARPARPPTTAGppapapPAAPAAGPPRRLTRP 2786
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2375 PRWPAHAPEGPRPRGADYTEPDSPREPPGGA----HDPAPRSPRTPRAAGCASPRHGRRLPNGYYAGHG-APRPRTARRG 2449
Cdd:PHA03247 2787 AVASLSESRESLPSPWDPADPPAAVLAPAAAlppaASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSvAPGGDVRRRP 2866
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2278-2460 |
4.08e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.67 E-value: 4.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2278 RPDTGRARAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSYSPAPRRPAARRM 2357
Cdd:PRK07764 601 PAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAA 680
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2358 AGPAAPPGGSPRGCRRA-------PRWPAHAPEGPRPRGADYTEPDSPREPPGGAHDPAPRsPRTPRAAGCASPrhgrrl 2430
Cdd:PRK07764 681 PPPAPAPAAPAAPAGAApaqpapaPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPL-PPEPDDPPDPAG------ 753
|
170 180 190
....*....|....*....|....*....|
gi 568955973 2431 PNGYYAGHGAPRPRTARRGAHDAYSESEDD 2460
Cdd:PRK07764 754 APAQPPPPPAPAPAAAPAAAPPPSPPSEEE 783
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
2292-2417 |
4.54e-03 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 42.37 E-value: 4.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2292 SRSPSEGREHTTHRQGSSSVSGSPA----PST--------SGTSTPRRGRRqlPQTPCTPRPLVSYSPaprrpaarrmag 2359
Cdd:PTZ00449 540 SDEPKEGGKPGETKEGEVGKKPGPAkehkPSKiptlskkpEFPKDPKHPKD--PEEPKKPKRPRSAQR------------ 605
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568955973 2360 PAAPPggSPR-----GCRRAPRWPaHAPEGPRpRGADYTEPDSPREPPGGAHDPAPRSPRTPR 2417
Cdd:PTZ00449 606 PTRPK--SPKlpellDIPKSPKRP-ESPKSPK-RPPPPQRPSSPERPEGPKIIKSPKPPKSPK 664
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2092-2431 |
5.04e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.62 E-value: 5.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2092 SPERGPPIDMPNSQPNSQSVEMREMGTDgysdsehyLPMEGQTraasmPRLPAENqrrRGRPRGNDLSTIS--DTSPMKR 2169
Cdd:PHA03247 2563 APDRSVPPPRPAPRPSEPAVTSRARRPD--------APPQSAR-----PRAPVDD---RGDPRGPAPPSPLppDTHAPDP 2626
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2170 SASVLGPKARRLDD-YSLERVPPEENQRYHQRRRDRGHRTSeRSLGRytdvdtglGTDLSMTTQsGDLPSKDRD-----Q 2243
Cdd:PHA03247 2627 PPPSPSPAANEPDPhPPPTVPPPERPRDDPAPGRVSRPRRA-RRLGR--------AAQASSPPQ-RPRRRAARPtvgslT 2696
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2244 DRGRPKDRKHRPHHHHHHHHHHPPAPdrdryaqERPDTGRARAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPSTSGTS 2323
Cdd:PHA03247 2697 SLADPPPPPPTPEPAPHALVSATPLP-------PGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAP 2769
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2324 TPRRGRRQLPQtPCTPRPLV-----------SYSPAPRRPAARRMAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPrgady 2392
Cdd:PHA03247 2770 APPAAPAAGPP-RRLTRPAVaslsesreslpSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPP----- 2843
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 568955973 2393 tEPDSPREPPGGAHDP----APRSPRTPRAAGCASPRH--GRRLP 2431
Cdd:PHA03247 2844 -GPPPPSLPLGGSVAPggdvRRRPPSRSPAAKPAAPARppVRRLA 2887
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
2295-2424 |
5.75e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 41.98 E-value: 5.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2295 PSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRR---GRRQLPQTPCTPRPLVSySPAPRRPAARRMAGPAAPPGGSPRGC 2371
Cdd:PHA03378 676 PSPTGANTMLPIQWAPGTMQPPPRAPTPMRPPAappGRAQRPAAATGRARPPA-AAPGRARPPAAAPGRARPPAAAPGRA 754
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 568955973 2372 RRaprwPAHAPEGPRPRGADYTEPdSPREPPGGAhdPAPRspRTPRAAGCASP 2424
Cdd:PHA03378 755 RP----PAAAPGRARPPAAAPGAP-TPQPPPQAP--PAPQ--QRPRGAPTPQP 798
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2275-2425 |
6.39e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.90 E-value: 6.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2275 AQERPDTGRARAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPlvSYSPAPRRPAA 2354
Cdd:PRK07764 626 APAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAA--PAGAAPAQPAP 703
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568955973 2355 RRMAGPAAPPGGSPRGcrrAPRWPAHAPEGPRPRGADY----TEPDSPREPPGGAHDPAPRSPRTPRAAGCASPR 2425
Cdd:PRK07764 704 APAATPPAGQADDPAA---QPPQAAQGASAPSPAADDPvplpPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPP 775
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
2285-2443 |
8.09e-03 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 41.35 E-value: 8.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2285 RAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCT-PRPLVSYSPAPRRPAARRMAGPAAP 2363
Cdd:PRK14086 104 RTSEPELPRPGRRPYEGYGGPRADDRPPGLPRQDQLPTARPAYPAYQQRPEPGAwPRAADDYGWQQQRLGFPPRAPYASP 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 2364 PGGSPRGCRRAPRWPAHAPEGPRPR------GADYTEP-----DSPREPPGGAHDPApRSPRTPRAAGCASPRHGRRLPn 2432
Cdd:PRK14086 184 ASYAPEQERDREPYDAGRPEYDQRRrdydhpRPDWDRPrrdrtDRPEPPPGAGHVHR-GGPGPPERDDAPVVPIRPSAP- 261
|
170
....*....|.
gi 568955973 2433 GYYAGHGAPRP 2443
Cdd:PRK14086 262 GPLAAQPAPAP 272
|
|
| PKD_channel |
pfam08016 |
Polycystin cation channel; This family contains the cation channel region from group II of ... |
607-804 |
8.87e-03 |
|
Polycystin cation channel; This family contains the cation channel region from group II of Transient receptor potential (TRP) channels, the TRPP subfamily, including PKD1, PKD2, PKD2L and mucolipin proteins.
Pssm-ID: 462341 [Multi-domain] Cd Length: 225 Bit Score: 40.34 E-value: 8.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 607 LSDFLYYAEFIFLGL---FMSEMFIKmYGLGTRPYFHSSFNCFDCGVIIGSIFEVIWAVIKPG----------------T 667
Cdd:pfam08016 6 RSLFILLCEIVFVVFflyFVVEEILK-IRKHRPSYLRSVWNLLDLAIVILSVVLIVLNIYRDFladrliksveaspvtfI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 668 SFG------------ISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFnfd 735
Cdd:pfam08016 85 DFDrvaqldnlyriiLAFLVFLTWLKLFKVLRFNKTMSLFTKTLSRAWKDLAGFALMFVIFFFAYAQFGYLLFGTQA--- 161
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568955973 736 egtppTNFDTFPAAIMTVFQILTG-EDWNEVMYdgiksqggvqGGMVFSI-YFIVLTLFGNYTLLNVFLAI 804
Cdd:pfam08016 162 -----PNFSNFVKSILTLFRTILGdFGYNEIFS----------GNRVLGPlLFLTFVFLVIFILLNLFLAI 217
|
|
| PLN03223 |
PLN03223 |
Polycystin cation channel protein; Provisional |
721-814 |
9.51e-03 |
|
Polycystin cation channel protein; Provisional
Pssm-ID: 215637 [Multi-domain] Cd Length: 1634 Bit Score: 41.47 E-value: 9.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955973 721 ALLGMQLFGGQFnfdegtppTNFDTFPAAIMTVFQILTGeDWNEVMYDgIKSQGGVQGgMVFSIYFIVLTLFGNYTLLNV 800
Cdd:PLN03223 1345 AFIGHVIFGNAS--------VHFSDMTDSINSLFENLLG-DITYFNED-LKNLTGLQF-VVGMIYFYSYNIFVFMILFNF 1413
|
90
....*....|....*...
gi 568955973 801 FLAIAVDNL----ANAQE 814
Cdd:PLN03223 1414 LLAIICDAFgevkANAAE 1431
|
|
| |
