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Conserved domains on  [gi|568993438|ref|XP_006521510|]
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cysteine-rich DPF motif domain-containing protein 1 isoform X1 [Mus musculus]

Protein Classification

C6_DPF domain-containing protein( domain architecture ID 10562767)

C6_DPF domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
C6_DPF pfam10170
Cysteine-rich domain; This is the N-terminal approximately 100 amino acids of a family of ...
 13-106 5.98e-52

Cysteine-rich domain; This is the N-terminal approximately 100 amino acids of a family of proteins found from nematodes to humans. It contains between six and eight highly conserved cysteine residues and a characteriztic DPF sequence motif. One member is putatively named as receptor for egg jelly protein but this could not confirmed.


:

Pssm-ID: 431108  Cd Length: 94  Bit Score: 158.55  E-value: 5.98e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568993438   13 FECQLCALSAPYSYVGQKPPDTQAVVLLEESYIMKDPFSSDKARFLVLGSRCSVCSRLVCVGPDCSLFYSKRVCLPCVQE 92
Cdd:pfam10170   1 FTCSLCGLTEPYDYFGQKPPFARSIVLLEEAYVMRDPFSPDKDRFLVLGSHCSICGKAVCVGPECSLFYTKRFCLPCAKE 80

                          90
                  ....*....|....
gi 568993438   93 NMSAFPQEIQQDVE 106
Cdd:pfam10170  81 NLKAFPPEIQEDLE 94
 
Name Accession Description Interval E-value
C6_DPF pfam10170
Cysteine-rich domain; This is the N-terminal approximately 100 amino acids of a family of ...
 13-106 5.98e-52

Cysteine-rich domain; This is the N-terminal approximately 100 amino acids of a family of proteins found from nematodes to humans. It contains between six and eight highly conserved cysteine residues and a characteriztic DPF sequence motif. One member is putatively named as receptor for egg jelly protein but this could not confirmed.


Pssm-ID: 431108  Cd Length: 94  Bit Score: 158.55  E-value: 5.98e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568993438   13 FECQLCALSAPYSYVGQKPPDTQAVVLLEESYIMKDPFSSDKARFLVLGSRCSVCSRLVCVGPDCSLFYSKRVCLPCVQE 92
Cdd:pfam10170   1 FTCSLCGLTEPYDYFGQKPPFARSIVLLEEAYVMRDPFSPDKDRFLVLGSHCSICGKAVCVGPECSLFYTKRFCLPCAKE 80

                          90
                  ....*....|....
gi 568993438   93 NMSAFPQEIQQDVE 106
Cdd:pfam10170  81 NLKAFPPEIQEDLE 94
 
Name Accession Description Interval E-value
C6_DPF pfam10170
Cysteine-rich domain; This is the N-terminal approximately 100 amino acids of a family of ...
 13-106 5.98e-52

Cysteine-rich domain; This is the N-terminal approximately 100 amino acids of a family of proteins found from nematodes to humans. It contains between six and eight highly conserved cysteine residues and a characteriztic DPF sequence motif. One member is putatively named as receptor for egg jelly protein but this could not confirmed.


Pssm-ID: 431108  Cd Length: 94  Bit Score: 158.55  E-value: 5.98e-52
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568993438   13 FECQLCALSAPYSYVGQKPPDTQAVVLLEESYIMKDPFSSDKARFLVLGSRCSVCSRLVCVGPDCSLFYSKRVCLPCVQE 92
Cdd:pfam10170   1 FTCSLCGLTEPYDYFGQKPPFARSIVLLEEAYVMRDPFSPDKDRFLVLGSHCSICGKAVCVGPECSLFYTKRFCLPCAKE 80

                          90
                  ....*....|....
gi 568993438   93 NMSAFPQEIQQDVE 106
Cdd:pfam10170  81 NLKAFPPEIQEDLE 94
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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