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Conserved domains on  [gi|568981984|ref|XP_006516814|]
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ras-responsive element-binding protein 1 isoform X1 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
zf-H2C2_2 pfam13465
Zinc-finger double domain;
1588-1612 6.65e-06

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 44.28  E-value: 6.65e-06
                           10        20
                   ....*....|....*....|....*
gi 568981984  1588 DLTRHMRSHTGERPYKCQTCERTFT 1612
Cdd:pfam13465    1 NLKRHMRTHTGEKPYKCPECGKSFK 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
1265-1290 7.86e-06

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 43.90  E-value: 7.86e-06
                           10        20
                   ....*....|....*....|....*.
gi 568981984  1265 SLQRHMLTHTGQKPFPCQKCDAFFST 1290
Cdd:pfam13465    1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
111-136 1.77e-05

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 43.13  E-value: 1.77e-05
                           10        20
                   ....*....|....*....|....*.
gi 568981984   111 SLDRHMLVHSGERPYKCTVCGQSFTT 136
Cdd:pfam13465    1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_5 pfam13909
C2H2-type zinc-finger domain;
669-693 4.78e-05

C2H2-type zinc-finger domain;


:

Pssm-ID: 404746 [Multi-domain]  Cd Length: 25  Bit Score: 41.77  E-value: 4.78e-05
                           10        20
                   ....*....|....*....|....*
gi 568981984   669 YQCNICDYIAADKAALIRHIRTHSG 693
Cdd:pfam13909    1 YKCSQCDYSTAWKSNLKRHLRKHTG 25
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
64-244 1.54e-04

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 46.23  E-value: 1.54e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568981984   64 SSYNCPLCEKICTTQHQLTMHIRQHNTDTGGAD-HAC--SICGKSLSSASSLDRHMLVHSGERPYKC--TVCGQSFTTNG 138
Cdd:COG5048   288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKpFSCpySLCGKLFSRNDALKRHILLHTSISPAKEklLNSSSKFSPLL 367

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568981984  139 NMHRHMKIHEKDTNSTTAAAPPSPLKRRRLSSKRKLShdaesedpgpakkmvedgQSGDLDKMSDEI--FHCPVCFKEFV 216
Cdd:COG5048   368 NNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNL------------------SLHIITHLSFRPynCKNPPCSKSFN 429

                         170       180
                  ....*....|....*....|....*....
gi 568981984  217 CKYELETHMETHSD-NPLRCDICCVTFRT 244
Cdd:COG5048   430 RHYNLIPHKKIHTNhAPLLCSILKSFRRD 458
zf-C2H2_6 pfam13912
C2H2-type zinc finger;
1575-1596 1.84e-03

C2H2-type zinc finger;


:

Pssm-ID: 433576  Cd Length: 27  Bit Score: 37.22  E-value: 1.84e-03
                           10        20
                   ....*....|....*....|..
gi 568981984  1575 VCSVCNKRFWSLQDLTRHMRSH 1596
Cdd:pfam13912    3 ECSECGKSFPSYQALGGHKKSH 24
zf-C2H2 pfam00096
Zinc finger, C2H2 type; The C2H2 zinc finger is the classical zinc finger domain. The two ...
 1602-1624 2.42e-03

Zinc finger, C2H2 type; The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter.


:

Pssm-ID: 395048 [Multi-domain]  Cd Length: 23  Bit Score: 36.89  E-value: 2.42e-03
                           10        20
                   ....*....|....*....|...
gi 568981984  1602 YKCQTCERTFTLKHSLVRHQRIH 1624
Cdd:pfam00096    1 YKCPDCGKSFSRKSNLKRHLRTH 23
ZnF_C2H2 smart00355
zinc finger;
1253-1273 9.61e-03

zinc finger;


:

Pssm-ID: 197676  Cd Length: 23  Bit Score: 35.13  E-value: 9.61e-03
                            10        20
                    ....*....|....*....|.
gi 568981984   1253 CPHCPRVFPWASSLQRHMLTH 1273
Cdd:smart00355    3 CPECGKVFKSKSALREHMRTH 23
 
Name Accession Description Interval E-value
zf-H2C2_2 pfam13465
Zinc-finger double domain;
1588-1612 6.65e-06

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 44.28  E-value: 6.65e-06
                           10        20
                   ....*....|....*....|....*
gi 568981984  1588 DLTRHMRSHTGERPYKCQTCERTFT 1612
Cdd:pfam13465    1 NLKRHMRTHTGEKPYKCPECGKSFK 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
1265-1290 7.86e-06

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 43.90  E-value: 7.86e-06
                           10        20
                   ....*....|....*....|....*.
gi 568981984  1265 SLQRHMLTHTGQKPFPCQKCDAFFST 1290
Cdd:pfam13465    1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
111-136 1.77e-05

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 43.13  E-value: 1.77e-05
                           10        20
                   ....*....|....*....|....*.
gi 568981984   111 SLDRHMLVHSGERPYKCTVCGQSFTT 136
Cdd:pfam13465    1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_5 pfam13909
C2H2-type zinc-finger domain;
669-693 4.78e-05

C2H2-type zinc-finger domain;


Pssm-ID: 404746 [Multi-domain]  Cd Length: 25  Bit Score: 41.77  E-value: 4.78e-05
                           10        20
                   ....*....|....*....|....*
gi 568981984   669 YQCNICDYIAADKAALIRHIRTHSG 693
Cdd:pfam13909    1 YKCSQCDYSTAWKSNLKRHLRKHTG 25
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
64-244 1.54e-04

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 46.23  E-value: 1.54e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568981984   64 SSYNCPLCEKICTTQHQLTMHIRQHNTDTGGAD-HAC--SICGKSLSSASSLDRHMLVHSGERPYKC--TVCGQSFTTNG 138
Cdd:COG5048   288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKpFSCpySLCGKLFSRNDALKRHILLHTSISPAKEklLNSSSKFSPLL 367

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568981984  139 NMHRHMKIHEKDTNSTTAAAPPSPLKRRRLSSKRKLShdaesedpgpakkmvedgQSGDLDKMSDEI--FHCPVCFKEFV 216
Cdd:COG5048   368 NNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNL------------------SLHIITHLSFRPynCKNPPCSKSFN 429

                         170       180
                  ....*....|....*....|....*....
gi 568981984  217 CKYELETHMETHSD-NPLRCDICCVTFRT 244
Cdd:COG5048   430 RHYNLIPHKKIHTNhAPLLCSILKSFRRD 458
zf-C2H2_6 pfam13912
C2H2-type zinc finger;
1575-1596 1.84e-03

C2H2-type zinc finger;


Pssm-ID: 433576  Cd Length: 27  Bit Score: 37.22  E-value: 1.84e-03
                           10        20
                   ....*....|....*....|..
gi 568981984  1575 VCSVCNKRFWSLQDLTRHMRSH 1596
Cdd:pfam13912    3 ECSECGKSFPSYQALGGHKKSH 24
zf-C2H2_4 pfam13894
C2H2-type zinc finger; This family contains a number of divergent C2H2 type zinc fingers.
 206-228 1.99e-03

C2H2-type zinc finger; This family contains a number of divergent C2H2 type zinc fingers.


Pssm-ID: 464025  Cd Length: 24  Bit Score: 37.24  E-value: 1.99e-03
                           10        20
                   ....*....|....*....|...
gi 568981984   206 FHCPVCFKEFVCKYELETHMETH 228
Cdd:pfam13894    1 FKCPICGKSFSSKKSLKRHLKTH 23
zf-C2H2 pfam00096
Zinc finger, C2H2 type; The C2H2 zinc finger is the classical zinc finger domain. The two ...
 1602-1624 2.42e-03

Zinc finger, C2H2 type; The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter.


Pssm-ID: 395048 [Multi-domain]  Cd Length: 23  Bit Score: 36.89  E-value: 2.42e-03
                           10        20
                   ....*....|....*....|...
gi 568981984  1602 YKCQTCERTFTLKHSLVRHQRIH 1624
Cdd:pfam00096    1 YKCPDCGKSFSRKSNLKRHLRTH 23
ZnF_C2H2 smart00355
zinc finger;
125-147 3.60e-03

zinc finger;


Pssm-ID: 197676  Cd Length: 23  Bit Score: 36.29  E-value: 3.60e-03
                            10        20
                    ....*....|....*....|...
gi 568981984    125 YKCTVCGQSFTTNGNMHRHMKIH 147
Cdd:smart00355    1 YRCPECGKVFKSKSALREHMRTH 23
ZnF_C2H2 smart00355
zinc finger;
1253-1273 9.61e-03

zinc finger;


Pssm-ID: 197676  Cd Length: 23  Bit Score: 35.13  E-value: 9.61e-03
                            10        20
                    ....*....|....*....|.
gi 568981984   1253 CPHCPRVFPWASSLQRHMLTH 1273
Cdd:smart00355    3 CPECGKVFKSKSALREHMRTH 23
 
Name Accession Description Interval E-value
zf-H2C2_2 pfam13465
Zinc-finger double domain;
1588-1612 6.65e-06

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 44.28  E-value: 6.65e-06
                           10        20
                   ....*....|....*....|....*
gi 568981984  1588 DLTRHMRSHTGERPYKCQTCERTFT 1612
Cdd:pfam13465    1 NLKRHMRTHTGEKPYKCPECGKSFK 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
1265-1290 7.86e-06

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 43.90  E-value: 7.86e-06
                           10        20
                   ....*....|....*....|....*.
gi 568981984  1265 SLQRHMLTHTGQKPFPCQKCDAFFST 1290
Cdd:pfam13465    1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
111-136 1.77e-05

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 43.13  E-value: 1.77e-05
                           10        20
                   ....*....|....*....|....*.
gi 568981984   111 SLDRHMLVHSGERPYKCTVCGQSFTT 136
Cdd:pfam13465    1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_5 pfam13909
C2H2-type zinc-finger domain;
669-693 4.78e-05

C2H2-type zinc-finger domain;


Pssm-ID: 404746 [Multi-domain]  Cd Length: 25  Bit Score: 41.77  E-value: 4.78e-05
                           10        20
                   ....*....|....*....|....*
gi 568981984   669 YQCNICDYIAADKAALIRHIRTHSG 693
Cdd:pfam13909    1 YKCSQCDYSTAWKSNLKRHLRKHTG 25
zf-C2H2 pfam00096
Zinc finger, C2H2 type; The C2H2 zinc finger is the classical zinc finger domain. The two ...
 125-147 1.30e-04

Zinc finger, C2H2 type; The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter.


Pssm-ID: 395048 [Multi-domain]  Cd Length: 23  Bit Score: 40.36  E-value: 1.30e-04
                           10        20
                   ....*....|....*....|...
gi 568981984   125 YKCTVCGQSFTTNGNMHRHMKIH 147
Cdd:pfam00096    1 YKCPDCGKSFSRKSNLKRHLRTH 23
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
64-244 1.54e-04

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 46.23  E-value: 1.54e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568981984   64 SSYNCPLCEKICTTQHQLTMHIRQHNTDTGGAD-HAC--SICGKSLSSASSLDRHMLVHSGERPYKC--TVCGQSFTTNG 138
Cdd:COG5048   288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKpFSCpySLCGKLFSRNDALKRHILLHTSISPAKEklLNSSSKFSPLL 367

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568981984  139 NMHRHMKIHEKDTNSTTAAAPPSPLKRRRLSSKRKLShdaesedpgpakkmvedgQSGDLDKMSDEI--FHCPVCFKEFV 216
Cdd:COG5048   368 NNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNL------------------SLHIITHLSFRPynCKNPPCSKSFN 429

                         170       180
                  ....*....|....*....|....*....
gi 568981984  217 CKYELETHMETHSD-NPLRCDICCVTFRT 244
Cdd:COG5048   430 RHYNLIPHKKIHTNhAPLLCSILKSFRRD 458
zf-C2H2_6 pfam13912
C2H2-type zinc finger;
1575-1596 1.84e-03

C2H2-type zinc finger;


Pssm-ID: 433576  Cd Length: 27  Bit Score: 37.22  E-value: 1.84e-03
                           10        20
                   ....*....|....*....|..
gi 568981984  1575 VCSVCNKRFWSLQDLTRHMRSH 1596
Cdd:pfam13912    3 ECSECGKSFPSYQALGGHKKSH 24
zf-C2H2_4 pfam13894
C2H2-type zinc finger; This family contains a number of divergent C2H2 type zinc fingers.
 206-228 1.99e-03

C2H2-type zinc finger; This family contains a number of divergent C2H2 type zinc fingers.


Pssm-ID: 464025  Cd Length: 24  Bit Score: 37.24  E-value: 1.99e-03
                           10        20
                   ....*....|....*....|...
gi 568981984   206 FHCPVCFKEFVCKYELETHMETH 228
Cdd:pfam13894    1 FKCPICGKSFSSKKSLKRHLKTH 23
zf-C2H2 pfam00096
Zinc finger, C2H2 type; The C2H2 zinc finger is the classical zinc finger domain. The two ...
 1602-1624 2.42e-03

Zinc finger, C2H2 type; The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter.


Pssm-ID: 395048 [Multi-domain]  Cd Length: 23  Bit Score: 36.89  E-value: 2.42e-03
                           10        20
                   ....*....|....*....|...
gi 568981984  1602 YKCQTCERTFTLKHSLVRHQRIH 1624
Cdd:pfam00096    1 YKCPDCGKSFSRKSNLKRHLRTH 23
ZnF_C2H2 smart00355
zinc finger;
125-147 3.60e-03

zinc finger;


Pssm-ID: 197676  Cd Length: 23  Bit Score: 36.29  E-value: 3.60e-03
                            10        20
                    ....*....|....*....|...
gi 568981984    125 YKCTVCGQSFTTNGNMHRHMKIH 147
Cdd:smart00355    1 YRCPECGKVFKSKSALREHMRTH 23
zf-C2H2_4 pfam13894
C2H2-type zinc finger; This family contains a number of divergent C2H2 type zinc fingers.
 125-147 4.96e-03

C2H2-type zinc finger; This family contains a number of divergent C2H2 type zinc fingers.


Pssm-ID: 464025  Cd Length: 24  Bit Score: 36.08  E-value: 4.96e-03
                           10        20
                   ....*....|....*....|...
gi 568981984   125 YKCTVCGQSFTTNGNMHRHMKIH 147
Cdd:pfam13894    1 FKCPICGKSFSSKKSLKRHLKTH 23
zf-H2C2_2 pfam13465
Zinc-finger double domain;
683-704 6.84e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.81  E-value: 6.84e-03
                           10        20
                   ....*....|....*....|..
gi 568981984   683 ALIRHIRTHSGERPYICKICHY 704
Cdd:pfam13465    1 NLKRHMRTHTGEKPYKCPECGK 22
zf-C2H2 pfam00096
Zinc finger, C2H2 type; The C2H2 zinc finger is the classical zinc finger domain. The two ...
 97-119 7.13e-03

Zinc finger, C2H2 type; The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter.


Pssm-ID: 395048 [Multi-domain]  Cd Length: 23  Bit Score: 35.74  E-value: 7.13e-03
                           10        20
                   ....*....|....*....|...
gi 568981984    97 HACSICGKSLSSASSLDRHMLVH 119
Cdd:pfam00096    1 YKCPDCGKSFSRKSNLKRHLRTH 23
ZnF_C2H2 smart00355
zinc finger;
1253-1273 9.61e-03

zinc finger;


Pssm-ID: 197676  Cd Length: 23  Bit Score: 35.13  E-value: 9.61e-03
                            10        20
                    ....*....|....*....|.
gi 568981984   1253 CPHCPRVFPWASSLQRHMLTH 1273
Cdd:smart00355    3 CPECGKVFKSKSALREHMRTH 23
zf-C2H2 pfam00096
Zinc finger, C2H2 type; The C2H2 zinc finger is the classical zinc finger domain. The two ...
 669-691 9.96e-03

Zinc finger, C2H2 type; The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter.


Pssm-ID: 395048 [Multi-domain]  Cd Length: 23  Bit Score: 34.97  E-value: 9.96e-03
                           10        20
                   ....*....|....*....|...
gi 568981984   669 YQCNICDYIAADKAALIRHIRTH 691
Cdd:pfam00096    1 YKCPDCGKSFSRKSNLKRHLRTH 23
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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