|
Name |
Accession |
Description |
Interval |
E-value |
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
96-636 |
7.30e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 72.28 E-value: 7.30e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 96 EELARKHHMAIEAVHSNASRDKIKLQTELEEQyKKEKLSLEEDKNQLQLELESLKQ---ALGDKLTSANQEIGRLQDLVR 172
Cdd:COG1196 220 EELKELEAELLLLKLRELEAELEELEAELEEL-EAELEELEAELAELEAELEELRLeleELELELEEAQAEEYELLAELA 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 173 KSEQGLGSAEGLISSLQDSQERLQSELDLTKGRLKETKDALLNVEAELQQERHEHEQTLATMKEEEK--LRVDRMAHDLE 250
Cdd:COG1196 299 RLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEalLEAEAELAEAE 378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 251 IKWTENLRQECSKLRQELRLQHEEDKKSAMSQLLQLKEREKNAARDSWQKKVEDLLNQRhslgEALHKSINNISLLKQNL 330
Cdd:COG1196 379 EELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEE----EEEEEALEEAAEEEAEL 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 331 ELQLCQSQTSLQQLQAQFTQERQRLtQELEELEEQHQQRHKSLKEAHVLAFQTMEEEKEKEQRALETHLQQKHSAELQSL 410
Cdd:COG1196 455 EEEEEALLELLAELLEEAALLEAAL-AELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVE 533
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 411 K-------DAHRESMEGFRVEMEQELQTLRFELEDEGKAMLASLRSELNHQHAASIDLLRHSHHQELAAAKMELERSIDI 483
Cdd:COG1196 534 AayeaaleAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADA 613
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 484 SRRQSKEHMCRISDLQEELRHREHHITDLD---KEVQHLHENINTLTKELELKGKEILRVRSESNQQMRLHEQDLNKRLE 560
Cdd:COG1196 614 RYYVLGDTLLGRTLVAARLEAALRRAVTLAgrlREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEEL 693
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568965751 561 KELDVMTADHLREKNIMRADFNKTNELLKEINAALQVSLEDMEEKYLMRESRPEDIQMIAELKSLITERDQVIKKL 636
Cdd:COG1196 694 ELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELEREL 769
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
50-537 |
8.91e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 65.73 E-value: 8.91e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 50 KIAQLTKKVNEAkrtQQEYYE--MELKNLQNRLEGEVAQLNEAHGKTLEELARKHHMAIEAVHSNASRDKIKLQTELEEQ 127
Cdd:COG1196 275 ELEELELELEEA---QAEEYEllAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEE 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 128 YKKEKLSLEEDKNQLQLELESLKQALGDKLTSANQEIGRLQDLVRKSEQGLGSAEGLISSLQDSQERLQSELDLTKGRLK 207
Cdd:COG1196 352 ELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALA 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 208 ETKDALLNVEAELQQERHEHEQTLATMKEEEKLRVDRM--AHDLEIKWTENLRQECSKLRQELRLQHEEDKKSAMSQLLQ 285
Cdd:COG1196 432 ELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLeeAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVK 511
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 286 LKEREKNAARDS--------WQKKVEDLLnqRHSLGEALHKSINN--------ISLLKQNLELQLCQSQTSLQQLQAQFT 349
Cdd:COG1196 512 AALLLAGLRGLAgavavligVEAAYEAAL--EAALAAALQNIVVEddevaaaaIEYLKAAKAGRATFLPLDKIRARAALA 589
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 350 QERQRLTQELEELEEQHQQRHKSLKEAHV---LAFQTMEEE-KEKEQRALETHLQQKHSAELQSLKDAHRESMEGFRVEM 425
Cdd:COG1196 590 AALARGAIGAAVDLVASDLREADARYYVLgdtLLGRTLVAArLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRE 669
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 426 EQELQTLRFELEDEGKAMLASLRSELNHQHAASIDLLRHSHHQELAAAKMELERSIDISRRQSKEHMCRISDLQEELRHR 505
Cdd:COG1196 670 LLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLE 749
|
490 500 510
....*....|....*....|....*....|..
gi 568965751 506 EHHITDLDKEvqhlhENINTLTKELELKGKEI 537
Cdd:COG1196 750 EEALEELPEP-----PDLEELERELERLEREI 776
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
46-628 |
1.07e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 58.91 E-value: 1.07e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 46 KMSKKIAQLTKKV----NEAKRTQQEYYEMELKNLQ-----NRLEGEVAQLNEAHGKTLEEL--ARKHHMAIEAVHSNAS 114
Cdd:TIGR02168 341 ELEEKLEELKEELesleAELEELEAELEELESRLEEleeqlETLRSKVAQLELQIASLNNEIerLEARLERLEDRRERLQ 420
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 115 RDKIKLQTELEEQYKKEKLSLEEDKNQLQLELESLKQALGDKLTSANQEIGRLQDLVRKSEQGLGSAEGLISSLQDSQER 194
Cdd:TIGR02168 421 QEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQEN 500
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 195 L-------------QSELDLTKGRLKEtkdaLLNVEAELQQ-------ERHEH---------EQTLATMKEEEKLRV--- 242
Cdd:TIGR02168 501 LegfsegvkallknQSGLSGILGVLSE----LISVDEGYEAaieaalgGRLQAvvvenlnaaKKAIAFLKQNELGRVtfl 576
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 243 ----------------DRMAHDLEIKWTENLRQECSKLRQ--ELRLQH---EEDKKSAMSQLLQLKEREKNAARDSWQKK 301
Cdd:TIGR02168 577 pldsikgteiqgndreILKNIEGFLGVAKDLVKFDPKLRKalSYLLGGvlvVDDLDNALELAKKLRPGYRIVTLDGDLVR 656
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 302 VEDLLNQRHSLGEA--LHKSiNNISLLKQNLELQLCQSQTSLQQLQAQFTQERQRLTQELEELEEQHQQRHKSLKEAHVL 379
Cdd:TIGR02168 657 PGGVITGGSAKTNSsiLERR-REIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDL 735
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 380 AFQTMEEEKEKEQRALETHLQQKHSAELQSLKDAhRESMEGFRVEMEQELQTLRFELEdEGKAMLASLRSELNHQHAAsi 459
Cdd:TIGR02168 736 ARLEAEVEQLEERIAQLSKELTELEAEIEELEER-LEEAEEELAEAEAEIEELEAQIE-QLKEELKALREALDELRAE-- 811
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 460 dllrhshHQELAAAKMELERSIDISRRQSKEHMCRISDLQEELRHREHHITDLDKEVQHLHENINTLTKELELKGKEilr 539
Cdd:TIGR02168 812 -------LTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNE--- 881
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 540 vRSESNQQMRLHEQDL----NKRLEKELDVMTADH-LREKNIMRADFN--------KTNELLKEINAALQVSLEDMEEKY 606
Cdd:TIGR02168 882 -RASLEEALALLRSELeelsEELRELESKRSELRReLEELREKLAQLElrleglevRIDNLQERLSEEYSLTLEEAEALE 960
|
650 660
....*....|....*....|...
gi 568965751 607 LMRESRPEDIQM-IAELKSLITE 628
Cdd:TIGR02168 961 NKIEDDEEEARRrLKRLENKIKE 983
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
36-403 |
4.17e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 53.91 E-value: 4.17e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 36 NMDYSQDMHLKMSKKIAQLTKKVNEAKRTQQeyYEMELKNLQNRLEgeVAQLNEAHGKtLEELARKHHMAIEAVHSnASR 115
Cdd:TIGR02168 187 NLDRLEDILNELERQLKSLERQAEKAERYKE--LKAELRELELALL--VLRLEELREE-LEELQEELKEAEEELEE-LTA 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 116 DKIKLQTELEEqYKKEKLSLEEDKNQLQLELESLkqalgdkltsaNQEIGRL-QDLVRKSEQglgsaeglISSLQDSQER 194
Cdd:TIGR02168 261 ELQELEEKLEE-LRLEVSELEEEIEELQKELYAL-----------ANEISRLeQQKQILRER--------LANLERQLEE 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 195 LQSELDLTKGRLKETKDALLNVEAELQQERHEHEQTLATMKEEEKLRvdRMAHDLEIKWTENLRQECSKLRqelrlQHEE 274
Cdd:TIGR02168 321 LEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAEL--EELESRLEELEEQLETLRSKVA-----QLEL 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 275 DKKSAMSQLLQLKEREK--NAARDSWQKKVEDLLNQRHSLgeALHKSINNISLLKQNLElqlcQSQTSLQQLQAQFTQER 352
Cdd:TIGR02168 394 QIASLNNEIERLEARLErlEDRRERLQQEIEELLKKLEEA--ELKELQAELEELEEELE----ELQEELERLEEALEELR 467
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 568965751 353 QRLTQELEELEEQHQQRHKSLKEAHVLafQTMEEEKEKEQRALETHLQQKH 403
Cdd:TIGR02168 468 EELEEAEQALDAAERELAQLQARLDSL--ERLQENLEGFSEGVKALLKNQS 516
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
127-529 |
2.00e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 51.60 E-value: 2.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 127 QYKKEKLSLEEDKNQLQLELESLKQALGD---KLTSANQEIGRLQDLVRKSEQGLGSAEGLISSLQDSQERLQSELDLTK 203
Cdd:TIGR02168 674 ERRREIEELEEKIEELEEKIAELEKALAElrkELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLS 753
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 204 GRLKETKDALLNVEAELQQERHEHEQTLATMKEEEKlRVDRMAHDLeikwtENLRQECSKLRQELRLQHEEdkksamsqL 283
Cdd:TIGR02168 754 KELTELEAEIEELEERLEEAEEELAEAEAEIEELEA-QIEQLKEEL-----KALREALDELRAELTLLNEE--------A 819
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 284 LQLKEREKNAARD--SWQKKVEDLLNQRHSLGEALHKSINNISLLKQNLElqlcqsqtslqqlqaQFTQERQRLTQELEE 361
Cdd:TIGR02168 820 ANLRERLESLERRiaATERRLEDLEEQIEELSEDIESLAAEIEELEELIE---------------ELESELEALLNERAS 884
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 362 LEEQHQQRHKSLKEAhvlafQTMEEEKEKEQRALETHLQqkhsaELQSLKDAHRESMEGFRVEMEQELQTLRFELEDEGK 441
Cdd:TIGR02168 885 LEEALALLRSELEEL-----SEELRELESKRSELRRELE-----ELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLE 954
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 442 AMLAslrselnhqHAASIDLLRHSHHQELAAAKMELERSIDISRRQSKEhmcrISDLQEELRHREHHITDLDKEVQHLHE 521
Cdd:TIGR02168 955 EAEA---------LENKIEDDEEEARRRLKRLENKIKELGPVNLAAIEE----YEELKERYDFLTAQKEDLTEAKETLEE 1021
|
....*...
gi 568965751 522 NINTLTKE 529
Cdd:TIGR02168 1022 AIEEIDRE 1029
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
82-604 |
2.15e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.45 E-value: 2.15e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 82 GEVAQLNEAHGKTLEELARKHHMAIEAVHSNASRDKIKLQTELEE------QYKKEKLSLEEDKNQLQLELESLKQAL-- 153
Cdd:COG4913 255 EPIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEElraelaRLEAELERLEARLDALREELDELEAQIrg 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 154 --GDKLTSANQEIGRLQDLVRKSEQGLGSAEGLISSLQDSQERLQSELDLTKGRLKETKDALLNVEAELQQERHEHEQTL 231
Cdd:COG4913 335 ngGDRLEQLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAAL 414
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 232 ATMKEEEKlrvdrmAHDLEIKWTE----NLRQECSKLRQELR--LQHEEDKKSAMSQLLQLKEREKnaardSWQKKVEDL 305
Cdd:COG4913 415 RDLRRELR------ELEAEIASLErrksNIPARLLALRDALAeaLGLDEAELPFVGELIEVRPEEE-----RWRGAIERV 483
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 306 L-NQRHSL-------GEALHKsINNISlLKQNLELQLCQSQTSLQQLQA------------------------------- 346
Cdd:COG4913 484 LgGFALTLlvppehyAAALRW-VNRLH-LRGRLVYERVRTGLPDPERPRldpdslagkldfkphpfrawleaelgrrfdy 561
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 347 -------QFTQERQRLTQELEELEEQHQQRH---KSLKEAHVLAFQTME--EEKEKEQRALETHLQQkHSAELQSLKDAH 414
Cdd:COG4913 562 vcvdspeELRRHPRAITRAGQVKGNGTRHEKddrRRIRSRYVLGFDNRAklAALEAELAELEEELAE-AEERLEALEAEL 640
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 415 RESMEgfRVEMEQELQTLRFELED--EGKAMLASLRSELNHQHAASIDLlrhshhqelaaakMELERSIDISRRQSKEHM 492
Cdd:COG4913 641 DALQE--RREALQRLAEYSWDEIDvaSAEREIAELEAELERLDASSDDL-------------AALEEQLEELEAELEELE 705
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 493 CRISDLQEELRHREHHITDLDKEVQHLHENINTLTKELELKGKEILRVRSEsNQQMRLHEQDLNKRLEKELDVMTADHLR 572
Cdd:COG4913 706 EELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFA-AALGDAVERELRENLEERIDALRARLNR 784
|
570 580 590
....*....|....*....|....*....|..
gi 568965751 573 EKNIMRADFNKTNELLKEINAALQVSLEDMEE 604
Cdd:COG4913 785 AEEELERAMRAFNREWPAETADLDADLESLPE 816
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
121-308 |
4.40e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.76 E-value: 4.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 121 QTELEEQYKKEKLSLEEDKNQLQLELESLKQ---ALGDKLTSANQEIGRLQDLVRKSEQGLGSAEGLISSLQDSQERLQS 197
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKeekALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 198 ELDLTKGRLKETKDA------------LLNVEAELQQERHEH---EQTLATMKEEEKLRVDRMAHDLEIKWTENLRQECS 262
Cdd:COG4942 98 ELEAQKEELAELLRAlyrlgrqpplalLLSPEDFLDAVRRLQylkYLAPARREQAEELRADLAELAALRAELEAERAELE 177
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 568965751 263 KLRQEL-----RLQHEEDKKSAMSQLLQLKEREKNAARDSWQKKVEDLLNQ 308
Cdd:COG4942 178 ALLAELeeeraALEALKAERQKLLARLEKELAELAAELAELQQEAEELEAL 228
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
188-478 |
4.80e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 50.32 E-value: 4.80e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 188 LQDSQERLQSELDLTKGRLKETKDALLNVEAELQQERHEHEQTLATMKEEEKLRVDRMAHDLEIKWTENLRQECSKLRQE 267
Cdd:COG1196 218 LKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAEL 297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 268 LRLQHEEDKKSAMSQLLQLKEREKNAARDSWQKKVEDLLNQRHSLGEALhksinnISLLKQNLELQLCQSQTSLQQLQAQ 347
Cdd:COG1196 298 ARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEEL------EEAEEELEEAEAELAEAEEALLEAE 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 348 FTQERQRLTQELEELEEQHQQRHKSLKEAHVLAFQTMEEEKEKEQRALETHLQQKHSAELQSLKDAHRESMEgfrvemEQ 427
Cdd:COG1196 372 AELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEA------LE 445
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|...
gi 568965751 428 ELQTLRFELEDEGKAMLASLRSELNH--QHAASIDLLRHSHHQELAAAKMELE 478
Cdd:COG1196 446 EAAEEEAELEEEEEALLELLAELLEEaaLLEAALAELLEELAEAAARLLLLLE 498
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
58-564 |
3.52e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 47.42 E-value: 3.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 58 VNEAKRTQQEYYEMELKNLQN---RLEGEVAQLNEAHGKTLEELARKHHMA-IEAVHSNASRDKI---------KLQTEL 124
Cdd:pfam15921 304 IQEQARNQNSMYMRQLSDLEStvsQLRSELREAKRMYEDKIEELEKQLVLAnSELTEARTERDQFsqesgnlddQLQKLL 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 125 EEQYKKEK-LSLEEDKNQL--------QLELESLKQALGDKltsaNQEIGRLQDLVR--KSEqGLGSAEGLISSLQDSQE 193
Cdd:pfam15921 384 ADLHKREKeLSLEKEQNKRlwdrdtgnSITIDHLRRELDDR----NMEVQRLEALLKamKSE-CQGQMERQMAAIQGKNE 458
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 194 RLQSELDLTkGRLKETKDALLNVEAELQQERHEHEQTLATMKE-----EEKLRVDRmAHDLEIKwteNLRQECSKLRQEL 268
Cdd:pfam15921 459 SLEKVSSLT-AQLESTKEMLRKVVEELTAKKMTLESSERTVSDltaslQEKERAIE-ATNAEIT---KLRSRVDLKLQEL 533
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 269 R-LQHEED---KKSAMSQLLQLKEREKNAARDSWQKKVED---LLNQRHSLGEALHKSINNISLLKQNLELQLCQSQTSL 341
Cdd:pfam15921 534 QhLKNEGDhlrNVQTECEALKLQMAEKDKVIEILRQQIENmtqLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILK 613
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 342 QQLQAQFTQERQRLTQELEELEEQHQQRHKSLKeahvlAFQTMEEEKEKEQRALETHlqqkhSAELQSLKDAHRESMEGF 421
Cdd:pfam15921 614 DKKDAKIRELEARVSDLELEKVKLVNAGSERLR-----AVKDIKQERDQLLNEVKTS-----RNELNSLSEDYEVLKRNF 683
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 422 RVEMEqELQTLRFELedegKAMLASLRSELnHQHAASIDLLRHSHHQELAAAkMELERSIDISRRQskehmcrISDLQEE 501
Cdd:pfam15921 684 RNKSE-EMETTTNKL----KMQLKSAQSEL-EQTRNTLKSMEGSDGHAMKVA-MGMQKQITAKRGQ-------IDALQSK 749
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568965751 502 LRHREHHITDLDKEVQHLHENINTLTKELELKGKEILRVRSE----SNQQMRLHEQDLNkrLEKELD 564
Cdd:pfam15921 750 IQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGElevlRSQERRLKEKVAN--MEVALD 814
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
48-561 |
5.46e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 46.89 E-value: 5.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 48 SKKIAQLTKKVNEAKRTQQEYYEMELKNLQNRLEGEVAQLNEAHGKTLEE--LARKHHMAIEAVHSNASRDKIKLQTELE 125
Cdd:TIGR00618 299 IKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQtlHSQEIHIRDAHEVATSIREISCQQHTLT 378
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 126 EQYKKEKLSLEEDKNQLQL---ELESLKQALGDKLTSANQEIGRLQDLVRKSEQGLGSAEGLISSLQDSQERLQSE---- 198
Cdd:TIGR00618 379 QHIHTLQQQKTTLTQKLQSlckELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEklek 458
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 199 --LDLTKGRLKETKDALLNVEAELQQE---RHEHEQTLATMKEEEKLRVDRMAH-DLEIKWTENLRQECSKLRQELR--L 270
Cdd:TIGR00618 459 ihLQESAQSLKEREQQLQTKEQIHLQEtrkKAVVLARLLELQEEPCPLCGSCIHpNPARQDIDNPGPLTRRMQRGEQtyA 538
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 271 QHEEDKKSAMSQLLQLKEREK--NAARDSWQKKVEDLLNQRHSLGEALHKSINNISLLKQNLELQLCQSQTSLQQLQAQF 348
Cdd:TIGR00618 539 QLETSEEDVYHQLTSERKQRAslKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALL 618
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 349 TQERQRLTQELEELEEQHQQRHKSLKEAHVLAFQ-TMEEEKEKEQRALETHLQQKHSAELQSLKDA---HRESMEGFRVE 424
Cdd:TIGR00618 619 RKLQPEQDLQDVRLHLQQCSQELALKLTALHALQlTLTQERVREHALSIRVLPKELLASRQLALQKmqsEKEQLTYWKEM 698
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 425 MEQELQTLRFELEDEGKamlaslrselNHQHAASIDLLRHSHHQELAAAKMELERSIDISRRQSKEHMCRISDLQEELRH 504
Cdd:TIGR00618 699 LAQCQTLLRELETHIEE----------YDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNE 768
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 568965751 505 REHHITDLDKEVQHLHENINTLTKELELKGKEILRVRSESNQQMRLHEQDLNKRLEK 561
Cdd:TIGR00618 769 EVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCET 825
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
249-569 |
5.49e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 46.85 E-value: 5.49e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 249 LEIKWTENLRQECSKLRQELRLQHEEDKKSAMSQLLQLKEREKNAARDSWQKKVEDLLNQRHSLGEALHKSINNISLLKQ 328
Cdd:COG1196 216 RELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 329 NLElQLCQSQTSLQQLQAQFTQERQRLTqelEELEEQHQQRHKSLKEAHVLAFQTMEEEKEKEQRALETHLQQKHSAELQ 408
Cdd:COG1196 296 ELA-RLEQDIARLEERRRELEERLEELE---EELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAE 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 409 SLKDAHRESMEGFRVEMEQELQTLRFELEDEGKAMLASLRSELNHQHAASIDLLRHSHHQELAAAKMELERSIDISRRQS 488
Cdd:COG1196 372 AELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEE 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 489 KEHMCRISDLQEELRHREHHITDLDKEVQHLHENINTLTKELELKGKEILRVRSESNQQMRLHEQDLNKRLEKELDVMTA 568
Cdd:COG1196 452 AELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIG 531
|
.
gi 568965751 569 D 569
Cdd:COG1196 532 V 532
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
122-639 |
1.89e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 44.96 E-value: 1.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 122 TELEEQYKKEKLSLEEDKNQLQLELESLKQALGDKLTSANQEIGRLQDLVRKSEQGLG----SAEGLISSLQDSQERLQS 197
Cdd:TIGR00618 179 TQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQqtqqSHAYLTQKREAQEEQLKK 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 198 ELDLTKGRLKETKDALLNVEAELQQERHEHEQTLATMKEEEK----LRVDRMAHDLEIKWTENLRQECSKLRQELRLQHE 273
Cdd:TIGR00618 259 QQLLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKavtqIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQS 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 274 EDKKSAMSQLLQLKEREKNAARDSWQKKVEDLLNQRHSLGEALHKSINNISLLKQNLELqLCQSQTSLQQLQAQFTQERQ 353
Cdd:TIGR00618 339 SIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQS-LCKELDILQREQATIDTRTS 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 354 RLTQELEELEEQHQQRHKSLKEAHVL-AFQTMEEEKEKEQRALETHLQQKHSAELQSLKDAHResmegfRVEMEQELQTL 432
Cdd:TIGR00618 418 AFRDLQGQLAHAKKQQELQQRYAELCaAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQ------IHLQETRKKAV 491
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 433 RFELEDEGKAMLASLRSELNHQHAASIDLLrhshhqELAAAKMELERSIDISRRQSKEHMCRISDLQEELRHR---EHHI 509
Cdd:TIGR00618 492 VLARLLELQEEPCPLCGSCIHPNPARQDID------NPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRaslKEQM 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 510 TDLDKEVQHLHENINTLTKELELKGKEILRVRSESNQQMRLHEQDLNKRLEKELDVMTADHLREKNIMRADFNKTNELLK 589
Cdd:TIGR00618 566 QEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKL 645
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|
gi 568965751 590 EINAALQVSLEDMEEKYLMRESRPEDIQMIAELKSLITERDQVIKKLIED 639
Cdd:TIGR00618 646 TALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYW 695
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
79-274 |
2.26e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.91 E-value: 2.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 79 RLEGEVAQLNEAHGKTLEELArkhhmaieavhsnASRDKIKLQTELEEQYKK--EKLSLEEDKNQLQLELESLKQALgDK 156
Cdd:COG4913 614 ALEAELAELEEELAEAEERLE-------------ALEAELDALQERREALQRlaEYSWDEIDVASAEREIAELEAEL-ER 679
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 157 LTSANQEIGRLQDLVRKSEQGLGSAEGLISSLQDSQERLQSELDLTKGRLKETKDALLNVEAELQQERHEHeqtLATMKE 236
Cdd:COG4913 680 LDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRAL---LEERFA 756
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 568965751 237 EEKL--RVDRMAHDLEIKwTENLRQECSKLRQELRLQHEE 274
Cdd:COG4913 757 AALGdaVERELRENLEER-IDALRARLNRAEEELERAMRA 795
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
46-442 |
2.42e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 44.75 E-value: 2.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 46 KMSKKIAQLTKKVNEAKRTQQEYYEMELKNLQNRLEgEVAQLNEAHGKTlEELARKHHMAIEAVHSNASRDKIKLQTELE 125
Cdd:PTZ00121 1353 EAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAE-EKKKADEAKKKA-EEDKKKADELKKAAAAKKKADEAKKKAEEK 1430
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 126 EQYKKEKLSLEEDKNQLQLELESLKQALGDKLTSANQEIGRLQDLVRKSEQGLGSAEglissLQDSQERLQSELDLTKGR 205
Cdd:PTZ00121 1431 KKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADE-----AKKKAEEAKKKADEAKKA 1505
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 206 LKETKDALLNVEAELQQERHEHEQTLATMKEEEKLRVDRMAHDLEIKWTENLRQECSKLRQELRLQHEEDKKSAMSQLLQ 285
Cdd:PTZ00121 1506 AEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEE 1585
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 286 LKEREKNAARDSWQKKVEDLLNQRHSLGEALHKSINNISLLKQNLELQLCQSQTSLQQLQAQFTQERQRLTQELEELEEQ 365
Cdd:PTZ00121 1586 AKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAE 1665
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 366 HQQRHKSLKEAHVLAFQTMEEEKEKEQRALETHLQQKHSAELQSLKDAHRESMEGFRVEMEQEL----QTLRFELEDEGK 441
Cdd:PTZ00121 1666 EAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKikaeEAKKEAEEDKKK 1745
|
.
gi 568965751 442 A 442
Cdd:PTZ00121 1746 A 1746
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
346-638 |
2.57e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 44.66 E-value: 2.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 346 AQFTQERQRLTQELEELEEQHQQRHKSLkEAHVLAFQTMEEEKEKEQRALETHLQQKHSAELQ------SLKDAHR--ES 417
Cdd:TIGR02168 242 EELQEELKEAEEELEELTAELQELEEKL-EELRLEVSELEEEIEELQKELYALANEISRLEQQkqilreRLANLERqlEE 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 418 MEGFRVEMEQELQTLRFELED--EGKAMLASLRSELNHQHAASIDLLrhshhQELAAAKMELERSIDISRRQSKEHMCRI 495
Cdd:TIGR02168 321 LEAQLEELESKLDELAEELAEleEKLEELKEELESLEAELEELEAEL-----EELESRLEELEEQLETLRSKVAQLELQI 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 496 SDLQEELRHREHHITDLDKEVQHLHENINTLTKELELKGKEILRVRSESNQQMRLHEQDLNKRLEKELDvmTADHLREKN 575
Cdd:TIGR02168 396 ASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALE--ELREELEEA 473
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568965751 576 imRADFNKTNELLKEINAALQvSLEDMEEKYlmrESRPEDIQMIAELKSLITERDQVIKKLIE 638
Cdd:TIGR02168 474 --EQALDAAERELAQLQARLD-SLERLQENL---EGFSEGVKALLKNQSGLSGILGVLSELIS 530
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
48-656 |
5.98e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.59 E-value: 5.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 48 SKKIAQLTKKVNEAKRTQQEYYEMELKNLQNRLEGEVAQLNEAHGKTLEELARKHHMAIEAVHSNASRDKIKLQTELEEQ 127
Cdd:PTZ00121 1327 AKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKK 1406
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 128 YKKEKLSLEEDKNQLQLELESLKQALGDKLTSANQEIGRLQDLVRKSEQGlGSAEGLISSLQDSQERlqselDLTKGRLK 207
Cdd:PTZ00121 1407 ADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEA-KKAEEAKKKAEEAKKA-----DEAKKKAE 1480
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 208 ETKDAllnVEAELQQERHEHEQTLATMKEEEKLRVDRMAHDLEIKWTENLRQ-ECSKLRQELRLQHEEDKKSAMSQLLQL 286
Cdd:PTZ00121 1481 EAKKA---DEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKaEEAKKADEAKKAEEKKKADELKKAEEL 1557
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 287 KEREKnaardswQKKVEDLLNQRHSLGEALHKSinniSLLKQnlelqlcqsqtslqqlqaqftQERQRLTQELEELEEQH 366
Cdd:PTZ00121 1558 KKAEE-------KKKAEEAKKAEEDKNMALRKA----EEAKK---------------------AEEARIEEVMKLYEEEK 1605
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 367 QQRHKSLKEAHVLAFQTMEEEKEKEQRALETHLQQKHSAELQSLKDAHRESmEGFRVEMEQELQTlrfelEDEGKAMLAS 446
Cdd:PTZ00121 1606 KMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAE-EENKIKAAEEAKK-----AEEDKKKAEE 1679
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 447 LRSELNHQHAASIDLLRhshhqelaaaKMELERSIDISRRQSKEHMCRISDLQEELRHREHHITDLDKEVQHLHENINTL 526
Cdd:PTZ00121 1680 AKKAEEDEKKAAEALKK----------EAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEA 1749
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 527 TKELELKGKEilrvrsesnQQMRLHEQDLNKRLEKELDVMTADHLREKNIMRAdfNKTNELLKEINAALQVSLEDMEEKY 606
Cdd:PTZ00121 1750 KKDEEEKKKI---------AHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRR--MEVDKKIKDIFDNFANIIEGGKEGN 1818
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....
gi 568965751 607 LM----RESRPEDIQMIAELKSLITERDQVIKKLIEDNKFYQLELVNRETNFNK 656
Cdd:PTZ00121 1819 LVindsKEMEDSAIKEVADSKNMQLEEADAFEKHKFNKNNENGEDGNKEADFNK 1872
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
48-297 |
7.23e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 43.13 E-value: 7.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 48 SKKIAQLTKKVNEAKRTQQEyyemeLKNLQNRLEGEVAQLNEAHGKTLEELARKHHM--AIEAVHSNASRDKIKLQTELE 125
Cdd:TIGR02169 708 SQELSDASRKIGEIEKEIEQ-----LEQEEEKLKERLEELEEDLSSLEQEIENVKSElkELEARIEELEEDLHKLEEALN 782
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 126 EQYKKeklsleedknqlqlELESLKQALGDKLTSANQEIGRLQDLVRKSEQGLGSAEGLISSLQDSQERLQSELDLTKGR 205
Cdd:TIGR02169 783 DLEAR--------------LSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQ 848
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 206 LKETKDALLNVEA---ELQQERHEHEQTLATMKEE-EKLRVDRMAHDLEIKWTENLRQECSKLRQELRLQHEEDKKSAMS 281
Cdd:TIGR02169 849 IKSIEKEIENLNGkkeELEEELEELEAALRDLESRlGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEA 928
|
250
....*....|....*.
gi 568965751 282 QLLQLKEREKNAARDS 297
Cdd:TIGR02169 929 LEEELSEIEDPKGEDE 944
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
375-641 |
1.17e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 42.62 E-value: 1.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 375 EAHVLAFQTMEEEKEKEQRALETHLQQKHSAElqslkdAHRESMEGFRVEMEQELQTLRFELEDEGKAMlaslrselnhq 454
Cdd:COG1196 228 ELLLLKLRELEAELEELEAELEELEAELEELE------AELAELEAELEELRLELEELELELEEAQAEE----------- 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 455 haasidllrhshhQELAAAKMELERSIDISRRQSKEHMCRISDLQEELRHREHHITDLDKEVQHLHENINTLTKELELKG 534
Cdd:COG1196 291 -------------YELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAE 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 535 KEILRV---RSESNQQMRLHEQDLNKRLEKELDVMTA---DHLREKNIMRADFNKTNELLKEINAALQVSLEDMEEKYLM 608
Cdd:COG1196 358 AELAEAeeaLLEAEAELAEAEEELEELAEELLEALRAaaeLAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEE 437
|
250 260 270
....*....|....*....|....*....|...
gi 568965751 609 RESRPEDIQMIAELKSLITERDQVIKKLIEDNK 641
Cdd:COG1196 438 EEEEEALEEAAEEEAELEEEEEALLELLAELLE 470
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
118-636 |
1.99e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 41.59 E-value: 1.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 118 IKLQTELEEqYKKEKLSLEEDKNqlqlELESLKQalgdKLTSANQEIGRLQDLVRKSEQGLGSAEGLISSLQDSQERLQS 197
Cdd:PRK03918 217 PELREELEK-LEKEVKELEELKE----EIEELEK----ELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKE 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 198 --ELDLTKGRLKETKDALLNVEAELQQERHEHEQTLATMKEEEKLRVDRMAhdlEIKWTENLRQECSKLRQELRLQHE-- 273
Cdd:PRK03918 288 lkEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEE---RLEELKKKLKELEKRLEELEERHEly 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 274 EDKKSAMSQLLQLKEREKNAARDSWQKKVEDLLNQRHSLGEALHKSINNISLLKQNLElQLCQSQTSLQQLQAQFTQERQ 353
Cdd:PRK03918 365 EEAKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIK-ELKKAIEELKKAKGKCPVCGR 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 354 RLTQELEELEEQHQQRHKSLKEAHVLAFQTMEEEKEKEQRALETHLqqKHSAELQSLKD------AHRESMEGFRVE--- 424
Cdd:PRK03918 444 ELTEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEKVL--KKESELIKLKElaeqlkELEEKLKKYNLEele 521
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 425 -MEQELQTLRFELeDEGKAMLASLRSELNHQHA-----ASIDLLRHSHHQELAAAKMELERSIDISRRQSKEhmcRISDL 498
Cdd:PRK03918 522 kKAEEYEKLKEKL-IKLKGEIKSLKKELEKLEElkkklAELEKKLDELEEELAELLKELEELGFESVEELEE---RLKEL 597
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 499 QE------ELRHREHHITDLDKEVQHLHENINTLTKELELKGKEILRVRSESNQQMRLHEQDLNKRLEKELDVMTADHLR 572
Cdd:PRK03918 598 EPfyneylELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEELREEYLELSRELAG 677
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568965751 573 ekniMRADFNKTNELLKEINAalqvSLEDMEEKYLMRESRPEDIQMIAELKSLITERDQVIKKL 636
Cdd:PRK03918 678 ----LRAELEELEKRREEIKK----TLEKLKEELEEREKAKKELEKLEKALERVEELREKVKKY 733
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
49-437 |
2.21e-03 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 41.46 E-value: 2.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 49 KKIAQLTKKVNEAKRTQQEYyEMELKNLQNRLEGEVAQLNEAHGKTLEELARKHHMAIEAVhsnASRDKIKLQTELEEQY 128
Cdd:COG1196 379 EELEELAEELLEALRAAAEL-AAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEE---EEEEALEEAAEEEAEL 454
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 129 KKEKLSLEEDKNQLQLELESLKQALGDKLTSANQEIGRLQDLVRKSEQGLGSAEG-LISSLQDSQERLQSELDLTKGRLK 207
Cdd:COG1196 455 EEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGvKAALLLAGLRGLAGAVAVLIGVEA 534
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 208 ETKDALLNVEAE-LQQERHEHEQTLATMKEEEK---------LRVDRMAHDLEIKWTENLRQECSKLRQELRLQHEEDKK 277
Cdd:COG1196 535 AYEAALEAALAAaLQNIVVEDDEVAAAAIEYLKaakagratfLPLDKIRARAALAAALARGAIGAAVDLVASDLREADAR 614
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 278 SAMSQLLQLKEREKNAARDSWQKKVEDLLNQRHSL---GEALHKSINNISLLKQNLELQLCQSQTSLQQLQAQFTQERQR 354
Cdd:COG1196 615 YYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVtleGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELE 694
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 355 LTQELEELEEQHQQRHKSLKEAHVLAFQTMEEEKEKEQRALETHLQQKHSAELQSLKDAHRESMEGFRVEMEQELQTLRF 434
Cdd:COG1196 695 LEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLER 774
|
...
gi 568965751 435 ELE 437
Cdd:COG1196 775 EIE 777
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
119-531 |
2.65e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 41.29 E-value: 2.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 119 KLQTELEEQYKKEKLSLEEDKNQLQlELESLKQALGDKLTSANQEIGRLQDLvrksEQGLGSAEGLISSLQDSQERLQSE 198
Cdd:COG4717 50 RLEKEADELFKPQGRKPELNLKELK-ELEEELKEAEEKEEEYAELQEELEEL----EEELEELEAELEELREELEKLEKL 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 199 LDL--TKGRLKETKDALLNVEAELQQERHEHEQTLATMKEEEKLRVDRmahdleikwtENLRQECSKLRQELRLQHEEDK 276
Cdd:COG4717 125 LQLlpLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAEL----------AELQEELEELLEQLSLATEEEL 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 277 KSAMSQLLQLKEREKNA--ARDSWQKKVEDLLNQRHSLGEALHKSINNISLLKQNLELQLCQSQTSLQQLQAQFTQERQR 354
Cdd:COG4717 195 QDLAEELEELQQRLAELeeELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILT 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 355 LTQELEELE-EQHQQRHKSLKEAHVLAFQTMEEEKEKEQRALETHLQQKHSAELQSLKDAHRESMEGFrVEMEQELQTLR 433
Cdd:COG4717 275 IAGVLFLVLgLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLEL-LDRIEELQELL 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 434 FELEDEGKAM-----LASLRSELNHQHAASIDLLR-----HSHHQELAAAKMELERSIDISRRQSKEHMCRIS--DLQEE 501
Cdd:COG4717 354 REAEELEEELqleelEQEIAALLAEAGVEDEEELRaaleqAEEYQELKEELEELEEQLEELLGELEELLEALDeeELEEE 433
|
410 420 430
....*....|....*....|....*....|
gi 568965751 502 LRHREHHITDLDKEVQHLHENINTLTKELE 531
Cdd:COG4717 434 LEELEEELEELEEELEELREELAELEAELE 463
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
115-426 |
3.13e-03 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 41.11 E-value: 3.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 115 RDKIKLQTELEEQYKKEKL----SLEEDKNQLQLELESLKQALGDKLTSANQEIGRLQDLVRKSEQGLGSAEGLISSLQD 190
Cdd:pfam02463 186 AELIIDLEELKLQELKLKEqakkALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEE 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 191 SQERLQSELDLTKGRLKETKDALLNVEAELQQERHEHEQTLATM------KEEEKLRVDRMAHDLEIKWTENLRQECSKL 264
Cdd:pfam02463 266 KLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKvddeekLKESEKEKKKAEKELKKEKEEIEELEKELK 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 265 RQELRLQHEEDKKSAMSQLLQLKEREKNAARDSWQKKVEDLLNQRHSLGEAL---HKSINNISLLKQNLELQLcQSQTSL 341
Cdd:pfam02463 346 ELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELelkSEEEKEAQLLLELARQLE-DLLKEE 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 342 QQLQAQFTQERQRLTQELEELEEQHQQRHKSLKEAHVLAFQTMEEEKEKEQRALETHLQQKHSAELQSLKDAHRESMEGF 421
Cdd:pfam02463 425 KKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESK 504
|
....*
gi 568965751 422 RVEME 426
Cdd:pfam02463 505 ARSGL 509
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
385-564 |
3.76e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 40.82 E-value: 3.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 385 EEEKEKEQRALETHLQQkhsaeLQSLKDAHRESMEGFRVEMEQElQTLRFELEDEgkamLASLRSELN--HQHAASIDll 462
Cdd:TIGR02169 310 IAEKERELEDAEERLAK-----LEAEIDKLLAEIEELEREIEEE-RKRRDKLTEE----YAELKEELEdlRAELEEVD-- 377
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 463 rhSHHQELAAAKMELERSIDISRRQSKEHMCRISDLQEELRHREHHITDLDKEVQHLHENINTLTKELELKGKEI--LRV 540
Cdd:TIGR02169 378 --KEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIkkQEW 455
|
170 180
....*....|....*....|....
gi 568965751 541 RSESNQQMRLHEQDLNKRLEKELD 564
Cdd:TIGR02169 456 KLEQLAADLSKYEQELYDLKEEYD 479
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
72-295 |
5.13e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 39.75 E-value: 5.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 72 ELKNLQNRLEGEVAQLNEAhGKTLEELARKHHMAIEAVhsNASRDKIKLQTELEEQYKKEKLSLEEDKNQLQLELESLKQ 151
Cdd:COG4942 21 AAAEAEAELEQLQQEIAEL-EKELAALKKEEKALLKQL--AALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 152 ALGDKLTSANQEIGRLQDLVRKSEQGL----GSAEGLISSLQDSQERLQSELDLTKgRLKETKDALLNVEAELQQERHEH 227
Cdd:COG4942 98 ELEAQKEELAELLRALYRLGRQPPLALllspEDFLDAVRRLQYLKYLAPARREQAE-ELRADLAELAALRAELEAERAEL 176
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568965751 228 EQTLATMKEE-EKLRVDRMAHDLEIKwteNLRQECSKLRQELRlQHEEDKKSAMSQLLQLKEREKNAAR 295
Cdd:COG4942 177 EALLAELEEErAALEALKAERQKLLA---RLEKELAELAAELA-ELQQEAEELEALIARLEAEAAAAAE 241
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
94-307 |
9.07e-03 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 39.42 E-value: 9.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 94 TLEELARKHHMAIEAVHSNASRDKIKLQTELEeQYKKEKLSLEEDKNQLQLELESLKQALGDKLTSANQeigrLQDLVRK 173
Cdd:pfam10174 440 TLEEALSEKERIIERLKEQREREDRERLEELE-SLKKENKDLKEKVSALQPELTEKESSLIDLKEHASS----LASSGLK 514
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568965751 174 SEQGLGSAEGLISSLQDSQERLQSEL------DLTKGRLKETKDALLNVEAELQQERHEH-------EQTLATMK--EEE 238
Cdd:pfam10174 515 KDSKLKSLEIAVEQKKEECSKLENQLkkahnaEEAVRTNPEINDRIRLLEQEVARYKEESgkaqaevERLLGILRevENE 594
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568965751 239 KLRVDRMAHDLEIKWTENLRQECSKLRQELRLQHEEDKKSAMsQLLQLKEREKNAARDSWQKKVEDLLN 307
Cdd:pfam10174 595 KNDKDKKIAELESLTLRQMKEQNKKVANIKHGQQEMKKKGAQ-LLEEARRREDNLADNSQQLQLEELMG 662
|
|
| |
