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Conserved domains on  [gi|530404259|ref|XP_005267948|]
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prostaglandin D2 receptor isoform X1 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tmA_PGD2 cd15140
prostaglandin D2 receptor, member of the class A family of seven-transmembrane G ...
17-335 2.49e-166

prostaglandin D2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin D2 receptor (also called prostanoid DP receptor, DP1, or PGD2R1) is a G-protein coupled receptor whose endogenous ligand is prostaglandin D2 (PGD2). PGD2, the major cyclooxygenase metabolite of arachidonic acid produced by mast cells, mediates inflammatory reactions in response to allergen challenge and causes peripheral vasodilation. PGD2 exerts its biological effects by binding to two types of cell surface receptors: a DP1 receptor that belongs to the prostanoid receptor family and a chemoattractant receptor-homologous molecule expressed on the T-helper type 2 cells (CRTH2 or PD2R2).


:

Pssm-ID: 320268 [Multi-domain]  Cd Length: 312  Bit Score: 466.68  E-value: 2.49e-166
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259  17 GNSAVMGGVLFSTGLLGNLLALGLLARSGLGWCSRRPLRPLPSVFYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLRVL 96
Cdd:cd15140    1 GSSVVSSSLLFAAGLLGNLLALGLLWLHKLHAKKQRGGRPRTSVFYVLVTVLTVTDLLGKCLLSPVVLAAYAQNRSLVGL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259  97 APALDNSLCQAFAFFMSFFGLSSTLQLLAMALECWLSLGHPFFYRRHITLRLGALVAPVVSAFSLAFCALPFMGFGKFVQ 176
Cdd:cd15140   81 TPAGNLNLCQVFAFLMIFFGLASTFILLAMALECWLSLGHPFFYQRHINKRLGALVSLILYAFCLGFCALPFFGFGRYVQ 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259 177 YCPGTWCFIQMVHEEGSLSVLGYSVLYSSLMALLVLATVLCNLGAMRNLYAMHRRLQRHPRSCTRDCaEPRADGREASPQ 256
Cdd:cd15140  161 YCPGTWCFIQMTAEESSTSALAYSVLYGSLMGLLVLAIVLCNLGIMRNLYQMYRRENEKGIPSTDLQ-GAAAFPRQQEPA 239
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 530404259 257 PLEELDHLLLLALMTVLFTMCSLPVIYRAYYGAFKDVKeknrtsEEAEDLRALRFLSVISIVDPWIFIIFRSPVFRIFF 335
Cdd:cd15140  240 GMEELEHLILLALMTVLFTACSLPVIARAYVGAFKGEK------NEAADLTALRFLSVNSIVDPWIFIIFRTSKFRGFL 312
 
Name Accession Description Interval E-value
7tmA_PGD2 cd15140
prostaglandin D2 receptor, member of the class A family of seven-transmembrane G ...
17-335 2.49e-166

prostaglandin D2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin D2 receptor (also called prostanoid DP receptor, DP1, or PGD2R1) is a G-protein coupled receptor whose endogenous ligand is prostaglandin D2 (PGD2). PGD2, the major cyclooxygenase metabolite of arachidonic acid produced by mast cells, mediates inflammatory reactions in response to allergen challenge and causes peripheral vasodilation. PGD2 exerts its biological effects by binding to two types of cell surface receptors: a DP1 receptor that belongs to the prostanoid receptor family and a chemoattractant receptor-homologous molecule expressed on the T-helper type 2 cells (CRTH2 or PD2R2).


Pssm-ID: 320268 [Multi-domain]  Cd Length: 312  Bit Score: 466.68  E-value: 2.49e-166
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259  17 GNSAVMGGVLFSTGLLGNLLALGLLARSGLGWCSRRPLRPLPSVFYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLRVL 96
Cdd:cd15140    1 GSSVVSSSLLFAAGLLGNLLALGLLWLHKLHAKKQRGGRPRTSVFYVLVTVLTVTDLLGKCLLSPVVLAAYAQNRSLVGL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259  97 APALDNSLCQAFAFFMSFFGLSSTLQLLAMALECWLSLGHPFFYRRHITLRLGALVAPVVSAFSLAFCALPFMGFGKFVQ 176
Cdd:cd15140   81 TPAGNLNLCQVFAFLMIFFGLASTFILLAMALECWLSLGHPFFYQRHINKRLGALVSLILYAFCLGFCALPFFGFGRYVQ 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259 177 YCPGTWCFIQMVHEEGSLSVLGYSVLYSSLMALLVLATVLCNLGAMRNLYAMHRRLQRHPRSCTRDCaEPRADGREASPQ 256
Cdd:cd15140  161 YCPGTWCFIQMTAEESSTSALAYSVLYGSLMGLLVLAIVLCNLGIMRNLYQMYRRENEKGIPSTDLQ-GAAAFPRQQEPA 239
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 530404259 257 PLEELDHLLLLALMTVLFTMCSLPVIYRAYYGAFKDVKeknrtsEEAEDLRALRFLSVISIVDPWIFIIFRSPVFRIFF 335
Cdd:cd15140  240 GMEELEHLILLALMTVLFTACSLPVIARAYVGAFKGEK------NEAADLTALRFLSVNSIVDPWIFIIFRTSKFRGFL 312
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
59-241 3.15e-14

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 71.56  E-value: 3.15e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259   59 SVFYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLrvlapALDNSLCQAFAFFMSFFGLSSTLQLLAMALECWLSLGHPF 138
Cdd:pfam00001  17 TPTNIFLLNLAVADLLFSLLTLPFWLVYYLNHGDW-----PFGSALCKIVGALFVVNGYASILLLTAISIDRYLAIVHPL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259  139 FYRRHITLRLGALVAPVVSAFSLAFCALP-FMGFGKFVQYCPGTWCFIQMVHEEGSLSVLgysVLYSSLMALLV--LATV 215
Cdd:pfam00001  92 RYKRRRTPRRAKVLILVIWVLALLLSLPPlLFGWTLTVPEGNVTVCFIDFPEDLSKPVSY---TLLISVLGFLLplLVIL 168
                         170       180
                  ....*....|....*....|....*.
gi 530404259  216 LCNLGAMRNLYAMHRRLQRHPRSCTR 241
Cdd:pfam00001 169 VCYTLIIRTLRKSASKQKSSERTQRR 194
 
Name Accession Description Interval E-value
7tmA_PGD2 cd15140
prostaglandin D2 receptor, member of the class A family of seven-transmembrane G ...
17-335 2.49e-166

prostaglandin D2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin D2 receptor (also called prostanoid DP receptor, DP1, or PGD2R1) is a G-protein coupled receptor whose endogenous ligand is prostaglandin D2 (PGD2). PGD2, the major cyclooxygenase metabolite of arachidonic acid produced by mast cells, mediates inflammatory reactions in response to allergen challenge and causes peripheral vasodilation. PGD2 exerts its biological effects by binding to two types of cell surface receptors: a DP1 receptor that belongs to the prostanoid receptor family and a chemoattractant receptor-homologous molecule expressed on the T-helper type 2 cells (CRTH2 or PD2R2).


Pssm-ID: 320268 [Multi-domain]  Cd Length: 312  Bit Score: 466.68  E-value: 2.49e-166
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259  17 GNSAVMGGVLFSTGLLGNLLALGLLARSGLGWCSRRPLRPLPSVFYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLRVL 96
Cdd:cd15140    1 GSSVVSSSLLFAAGLLGNLLALGLLWLHKLHAKKQRGGRPRTSVFYVLVTVLTVTDLLGKCLLSPVVLAAYAQNRSLVGL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259  97 APALDNSLCQAFAFFMSFFGLSSTLQLLAMALECWLSLGHPFFYRRHITLRLGALVAPVVSAFSLAFCALPFMGFGKFVQ 176
Cdd:cd15140   81 TPAGNLNLCQVFAFLMIFFGLASTFILLAMALECWLSLGHPFFYQRHINKRLGALVSLILYAFCLGFCALPFFGFGRYVQ 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259 177 YCPGTWCFIQMVHEEGSLSVLGYSVLYSSLMALLVLATVLCNLGAMRNLYAMHRRLQRHPRSCTRDCaEPRADGREASPQ 256
Cdd:cd15140  161 YCPGTWCFIQMTAEESSTSALAYSVLYGSLMGLLVLAIVLCNLGIMRNLYQMYRRENEKGIPSTDLQ-GAAAFPRQQEPA 239
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 530404259 257 PLEELDHLLLLALMTVLFTMCSLPVIYRAYYGAFKDVKeknrtsEEAEDLRALRFLSVISIVDPWIFIIFRSPVFRIFF 335
Cdd:cd15140  240 GMEELEHLILLALMTVLFTACSLPVIARAYVGAFKGEK------NEAADLTALRFLSVNSIVDPWIFIIFRTSKFRGFL 312
7tmA_Prostanoid_R cd14981
G protein-coupled receptors for prostanoids, member of the class A family of ...
17-335 1.04e-89

G protein-coupled receptors for prostanoids, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320112 [Multi-domain]  Cd Length: 288  Bit Score: 271.04  E-value: 1.04e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259  17 GNSAVMGGVLFSTGLLGNLLALGLLARSGLGWCsrrplrplPSVFYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLrvl 96
Cdd:cd14981    1 GESPAPPALMFVFGVLGNLLALIVLARSSKSHK--------WSVFYRLVAGLAITDLLGILLTSPVVLAVYASNFEW--- 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259  97 apALDNSLCQAFAFFMSFFGLSSTLQLLAMALECWLSLGHPFFYRRHITLRLGALVAPVVSAFSLAFCALPFMGFGKFVQ 176
Cdd:cd14981   70 --DGGQPLCDYFGFMMSFFGLSSLLIVCAMAVERFLAITHPFFYNSHVKKRRARLMLGAVWAFALLIASLPLLGLGSYVL 147
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259 177 YCPGTWCFIQMVHeeGSLSVLGYSVLYSSLMALLVLATVLCNLGAMRNLYAMHRRLQRHPRSctrdcaepradGREASPQ 256
Cdd:cd14981  148 QYPGTWCFLDFYS--KNTGDAAYAYLYSILGLLILLVTLLCNLLVIITLLRMRRRKKRHRRS-----------RRSARRQ 214
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 530404259 257 PLEELDHLLLLALMTVLFTMCSLPVIYRAYYGAFKDvkeknRTSEEAEDLRALRFLSVISIVDPWIFIIFRSPVFRIFF 335
Cdd:cd14981  215 KRNEIQMVVLLLAITVVFSVCWLPLMIRVLINATGD-----SEKNGKTDLLAVRMASWNQILDPWVYILLRKEVLRRLY 288
7tmA_PGE2_EP2 cd15139
prostaglandin E2 receptor EP2 subtype, member of the class A family of seven-transmembrane G ...
49-333 1.62e-82

prostaglandin E2 receptor EP2 subtype, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin E2 receptor EP2, also called prostanoid EP2 receptor, is one of four receptor subtypes whose endogenous physiological ligand is prostaglandin E2 (PGE2). Each of these subtypes (EP1-EP4) have unique but overlapping tissue distributions that activate different intracellular signaling pathways. Stimulation of the EP2 receptor by PGE2 causes cAMP accumulation through G(s) protein activation, which subsequently produces smooth muscle relaxation and mediates the systemic vasodepressor response to PGE2. Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320267 [Multi-domain]  Cd Length: 299  Bit Score: 253.16  E-value: 1.62e-82
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259  49 CSRRPLRPLPSVFYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLRVLAPalDNSLCQAFAFFMSFFGLSSTLQLLAMAL 128
Cdd:cd15139   28 RRRKEVGRRQSLFHVLVTSLVITDLLGTCLISPVVLASYSRNTTLVGMSP--NRLVCGYFGFAMTFFSLATMLILLAMAL 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259 129 ECWLSLGHPFFYRRHITLRLGALVAPVVSAFSLAFCALPFMGFGKFVQYCPGTWCFIQMVHEEGSLSVlgYSVLYSSLMA 208
Cdd:cd15139  106 ERCLSIGHPYFYERYVSKRCGYVTIPLIYLLCALFCLFPFLGFGKYVQYCPGTWCFIDMNPEASEHRA--YANLYATLLL 183
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259 209 LLVLATVLCNLGAMRNLYAMHRRLQRHPRSctrdcAEPRADGREASPQPLEELDHLLLLALMTVLFTMCSLPVIYRAYYG 288
Cdd:cd15139  184 LLIVAVVLCNASVIYHLVRMYRRRKRNRSS-----VGGRARSHRRRFSMAEEVEHLILLVFMTIIFVICSLPLTIQVYMN 258
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 530404259 289 AFKDVKEKNRtseeaeDLRALRFLSVISIVDPWIFIIFRSPVFRI 333
Cdd:cd15139  259 TFSDSENHKW------DLIALRFLSVNPIIDPWVFIILSPPVLRL 297
7tmA_PGI2 cd15141
prostaglandin I2 receptor, member of the class A family of seven-transmembrane G ...
51-332 1.13e-71

prostaglandin I2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin I2 receptor (also called prostacyclin receptor or prostanoid IP receptor) is a class A, G protein-coupled receptor whose endogenous ligand is prostacyclin, which is the major product of cyclooxygenase metabolite of arachidonic acid that found predominantly in platelets and vascular smooth muscle cells (VSMCs). The PGI2 receptor is coupled to both G(s) and G(q) protein subtypes, resulting in increased cAMP formation, phosphoinositide turnover, and Ca2+ signaling. PGI2 receptor activation by prostacyclin induces VSMC differentiation and produces a potent vasodilation and inhibition of platelet aggregation.


Pssm-ID: 320269 [Multi-domain]  Cd Length: 301  Bit Score: 225.47  E-value: 1.13e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259  51 RRPLRPLPSVFYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLrvLAPALDNSLCQAFAFFMSFFGLSSTLQLLAMALEC 130
Cdd:cd15141   29 RKERRTKSSAFCVLVTGLAATDLLGTCFLSPMVFVSYAQNSSL--LGLAAGQPLCHLFAFAMTFFGLASMLILFAMAVER 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259 131 WLSLGHPFFYRRHITLRLGALVAPVVSAFSLAFCALPFMGFGKFVQYCPGTWCFIQM-VHEEGSLSVLGYSVLYSSLMAL 209
Cdd:cd15141  107 CLAISHPYFYAQHSGRRLAKLALPAIYAFGALFCALPLLGVGRHKQYCPGTWCFIRMtVPGHREPGSLAFSLLYASLMAL 186
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259 210 LVLATVLCNLGAMRNLYAMHRRLQRH---PRSCTRDCAEPRADGREASpqpleeldHLLLLALMTVLFTMCSLPVIYRAY 286
Cdd:cd15141  187 LIAAIFLCNGSVTVSLCRMYRGQKARrgsLRRCGRLGWWLGQGEEEVD--------HLILLALMTVIFVVCSLPLTIRAF 258
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*.
gi 530404259 287 YGAFKDVkeknrtSEEAEDLRALRFLSVISIVDPWIFIIFRSPVFR 332
Cdd:cd15141  259 LGAIAPD------GNESGDLLAFRFSAFNPILDPWIFIIFRKAVFR 298
7tmA_PGE2_EP4 cd15142
prostaglandin E2 receptor EP4 subtype, member of the class A family of seven-transmembrane G ...
59-332 1.34e-52

prostaglandin E2 receptor EP4 subtype, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin E2 receptor EP4, also called prostanoid EP4 receptor, is one of four receptor subtypes whose endogenous physiological ligand is prostaglandin E2 (PGE2). Each of these subtypes (EP1-EP4) have unique but overlapping tissue distributions that activate different intracellular signaling pathways. Like the EP2 receptor, stimulation of the EP4 receptor by PGE2 causes cAMP accumulation through G(s) protein activation. Knockout studies in mice suggest that EP4 receptor may be involved in the maintenance of bone mass and fracture healing. Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320270 [Multi-domain]  Cd Length: 302  Bit Score: 176.15  E-value: 1.34e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259  59 SVFYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLRvlapalDNSLCQAFAFFMSFFGLSSTLQLLAMALECWLSLGHPF 138
Cdd:cd15142   35 TTFYTLVCGLAVTDLLGTCLASPVTIATYLKGRWPG------GQPLCEYFSFILLFFSLSGLSIICAMSIERYLAINHAY 108
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259 139 FYRRHITLRLGALVAPVVSAFSLAFCALPFMGFGKFVQYCPGTWCFIQMVHEEGSLSvlGYSVLYSSLMALLVLATVLCN 218
Cdd:cd15142  109 FYNHYVDKRLAGLTLFAIYASNILFCALPSMGLGKSKLQYPKTWCFIDWRTNVSVHA--AYSYMYAGFSSLLILVTVLCN 186
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259 219 LGAMRNLYAMHRRLQRhpRSCTRDCAEPRADGREASPQPLEEL--DHLLLLALMTVLFTMCSLPVIYRAYYGAFKDVKEK 296
Cdd:cd15142  187 VLVCGALIRMHRQFVR--RTSLGTDQRLSDFRRRRSFRRMAGAeiQMVILLIATSVVVLICSIPLVVRVFVNQLYQPAVE 264
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 530404259 297 NRTSEEAeDLRALRFLSVISIVDPWIFIIFRSPVFR 332
Cdd:cd15142  265 KDLDKNP-DLQAIRIASVNPILDPWIYILLRKTVLS 299
7tmA_PGE2_EP3 cd15146
prostaglandin E2 receptor EP3 subtype, member of the class A family of seven-transmembrane G ...
61-334 1.71e-18

prostaglandin E2 receptor EP3 subtype, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin E2 receptor EP3, also called prostanoid EP3 receptor, is one of four receptor subtypes whose endogenous physiological ligand is prostaglandin E2 (PGE2). Each of these subtypes (EP1-EP4) have unique but overlapping tissue distributions that activate different intracellular signaling pathways. Stimulation of the EP3 receptor by PGE2 preferentially couples to G(i) protein. This leads to a decrease in adenylate cyclase activity, thereby decreasing cAMP levels, which subsequently produces smooth muscle contraction. Knockout mice studies suggest that the EP3 receptor may act as a systemic vasopressor. Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320274 [Multi-domain]  Cd Length: 308  Bit Score: 84.93  E-value: 1.71e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259  61 FYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLRVLAPAldNSLCQAFAFFMSFFGLSSTLQLLAMALECWLSLGHPFFY 140
Cdd:cd15146   40 FLLCIGSLALTDLFGQLLTSPIVISVYLSDRKWERVDPS--GRLCPFFGLCMTVFGLCPLFIASAMAIERALAIRAPHWY 117
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259 141 RRHITLRLGALVAPVVSAFSLAFCALPFMGFGKFVQYCPGTWCFIQMvhEEGSLSVLGYSVLYSSLMALLVLATVLCNLG 220
Cdd:cd15146  118 SSHMKTRVTKAVLLGIWLAVLAFALLPIAGVGQYTLQWPGTWCFIST--GDGEPGNNFFASTFASLGLFSLCVTFSCNLA 195
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259 221 AMRNLYAMHRRlqrhprsctrdcaepRADGREASPQ--PLEELDHLLLLALMTVLFTMCS------LPVIY-RAYYGAFK 291
Cdd:cd15146  196 TIRALVSRCKT---------------KAGASVSSKQweRITTETLIQLLGIMCVLSACWSpllvlmLKMISnHTSSEHCK 260
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 530404259 292 DVKEKNRTSEEAED----LRALRFLSVISIVDPWIFIIFRSPVFRIF 334
Cdd:cd15146  261 SATAPPQSTELQKDcnffLTAVRLASLNQILDPWVYLLLRKILLRKF 307
7tmA_TXA2_R cd15143
thromboxane A2 receptor, member of the class A family of seven-transmembrane G protein-coupled ...
59-332 3.28e-16

thromboxane A2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The thromboxane receptor, also known as the prostanoid TP receptor, is a class A G-protein coupled receptor whose endogenous ligand is thromboxane A2 (TXA2). TXA2 is the major product of cyclooxygenase metabolite of arachidonic acid that found predominantly in platelets and stimulates platelet aggregation, Ca2+ influx into platelets, and also causes vasoconstriction. TXA2 has been shown to be involved in immune regulation, angiogenesis and metastasis, among many others. Activation of TXA2 receptor is coupled to G(q) and G(13), resulting in the activations of phospholipase C and RhoGEF, respectively. TXA2 receptor is widely distributed in the body and is abundantly expressed in thymus and spleen.


Pssm-ID: 320271 [Multi-domain]  Cd Length: 296  Bit Score: 77.94  E-value: 3.28e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259  59 SVFYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLRVLAPalDNSLCQAFAFFMSFFGLSSTLQLLAMALECWLSLGHPF 138
Cdd:cd15143   38 SSFLIFLCGLVVTDFLGLLVTGTIVISFHLTNFNWRVVDP--DCYLCNFMGLSMVFYGLCPLLLGATMAVERFFGINRPF 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259 139 FYRRHITLRLGALVAPVVSAFSLAFCALPFMGFGKFVQYCPGTWCFIQMVHEEGSLSvlgYSVLYSSLMALLVLATVLCN 218
Cdd:cd15143  116 SRSTAMSKRRAWYMVGMVWAFAFLLGLLPILGLGRYTLQYPGSWCFLTLLFDSKDVA---FGLLFSFLGILSVGLSFLLN 192
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259 219 LGAMRNLYAMHRRLQRHPRsctrdcaePRADGREASPQpleeldhlllLALMTVLFTMCSLP-VIYRA-----YYGAFKD 292
Cdd:cd15143  193 TVSVVTLCRVYHDRESVQR--------RRDSEVEMMVQ----------LLGIMVIASVCWLPlLVFIAqtvlqKPPAMLL 254
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 530404259 293 VKEKNRTSEEaEDLRALRFLSVISIVDPWIFIIFRSPVFR 332
Cdd:cd15143  255 AGQIPRLTEK-KLLIYLRFATWNQILDPWVYILFRRAVLK 293
7tmA_PGE2_EP1 cd15144
prostaglandin E2 receptor EP1 subtype, member of the class A family of seven-transmembrane G ...
61-332 2.95e-15

prostaglandin E2 receptor EP1 subtype, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostaglandin E2 receptor EP1, also called prostanoid EP1 receptor, is one of four receptor subtypes whose endogenous physiological ligand is prostaglandin E2 (PGE2). Each of these subtypes (EP1-EP4) have unique but overlapping tissue distributions that activate different intracellular signaling pathways. It has been shown that stimulation of the EP1 receptor by PGE2 causes smooth muscle contraction and increased intracellular Ca2+ levels; however, it is still unclear whether EP1 receptor is exclusively coupled to G(q/11), which leading to activation of phospholipase C and phosphatidylinositol hydrolysis. Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320272 [Multi-domain]  Cd Length: 294  Bit Score: 75.20  E-value: 2.95e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259  61 FYMLVCGLTVTDLLGKCLLSPVVLAAYAqnrSLRVLAPALDNSLCQAFAFFMSFFGLSSTLQLLAMALECWLSLGHPFFY 140
Cdd:cd15144   40 FLLFASSLVLTDLAGHVIPGALVLRLYL---SGQMPAEEPRGALCQFFGACMVFFGLCPLFLGCAMAVERCVGVTRPLLH 116
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259 141 RRHITLRLGALVAPVVSAFSLAFCALPFMGFGKFVQYCPGTWCFIQmVHEEGSLSVLGYSVLYSSLMALLVLATVLCNlg 220
Cdd:cd15144  117 SSVVTTTRTKLSLLAIWAVALAVALLPLFRFGRYKPQFPGTWCFIK-VQPPGSWADVAFALLFSLLGLASLLVSLVCN-- 193
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259 221 AMRNLYAMHRRLQRHPRSCTRdcaEPRADGREASPQpleeldhlllLALMTVLFTMCSLPVIYRAYYgAFKDVKEKNRTS 300
Cdd:cd15144  194 TISGLTLVRARLRKKCSCSNR---RAKSHDIEMVVQ----------LVGIMVVSCICWSPLLIFVLI-SVSRSYERPKHQ 259
                        250       260       270
                 ....*....|....*....|....*....|..
gi 530404259 301 EEAEDLRALRFLSVISIVDPWIFIIFRSPVFR 332
Cdd:cd15144  260 YEKLLFLGVRLASWNQILDPWVYILLRRAVLR 291
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
59-241 3.15e-14

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 71.56  E-value: 3.15e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259   59 SVFYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLrvlapALDNSLCQAFAFFMSFFGLSSTLQLLAMALECWLSLGHPF 138
Cdd:pfam00001  17 TPTNIFLLNLAVADLLFSLLTLPFWLVYYLNHGDW-----PFGSALCKIVGALFVVNGYASILLLTAISIDRYLAIVHPL 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259  139 FYRRHITLRLGALVAPVVSAFSLAFCALP-FMGFGKFVQYCPGTWCFIQMVHEEGSLSVLgysVLYSSLMALLV--LATV 215
Cdd:pfam00001  92 RYKRRRTPRRAKVLILVIWVLALLLSLPPlLFGWTLTVPEGNVTVCFIDFPEDLSKPVSY---TLLISVLGFLLplLVIL 168
                         170       180
                  ....*....|....*....|....*.
gi 530404259  216 LCNLGAMRNLYAMHRRLQRHPRSCTR 241
Cdd:pfam00001 169 VCYTLIIRTLRKSASKQKSSERTQRR 194
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
59-326 1.25e-13

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 70.40  E-value: 1.25e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259  59 SVFYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRslrvlaPALDNSLCQAFAFFMSFFGLSSTLQLLAMALECWLSLGHPF 138
Cdd:cd00637   31 TVTNYFILNLAVADLLVGLLVIPFSLVSLLLGR------WWFGDALCKLLGFLQSVSLLASILTLTAISVDRYLAIVHPL 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259 139 FYRRHITLRLGALVAPVVSAFSLAFCALPFMGFGKFVQYCPGTWCFIQMVHEegslSVLGYSVLYSSLMALLVLATVL-C 217
Cdd:cd00637  105 RYRRRFTRRRAKLLIALIWLLSLLLALPPLLGWGVYDYGGYCCCCLCWPDLT----LSKAYTIFLFVLLFLLPLLVIIvC 180
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259 218 NLGAMRNLYAmHRRLQRHPRSCTRDCAEPRADGReaspqpleeldHLLLLALMTVLFTMCSLPVIYRAYYGAFKDVKEKN 297
Cdd:cd00637  181 YVRIFRKLRR-HRRRIRSSSSNSSRRRRRRRERK-----------VTKTLLIVVVVFLLCWLPYFILLLLDVFGPDPSPL 248
                        250       260       270
                 ....*....|....*....|....*....|....
gi 530404259 298 rtseeaedLRALRFLSVI-----SIVDPWIFIIF 326
Cdd:cd00637  249 --------PRILYFLALLlaylnSAINPIIYAFF 274
7tmA_FP cd15145
prostaglandin F2-alpha receptor, member of the class A family of seven-transmembrane G ...
59-335 1.84e-11

prostaglandin F2-alpha receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The PGF2-alpha receptor, also called prostanoid FP receptor, is a class A G-protein coupled receptor whose endogenous ligand is prostaglandin F2-alpha. PGF2-alpha binding to this receptor is coupled to the stimulation of phospholipase C (PLC) pathway via G-protein subunit G(q). This leads to the release of inositol trisphosphate (IP3) and diacylglycerol (DAG) which results in increased intracellular Ca2+ levels and activation of PKC. The receptor activation primarily induces uterine contraction and bronchoconstriction, and stimulates luteolysis. Like most prostanoid receptors, the PGF2-alpha receptor has also been implicated in tumor angiogenesis and metastasis.


Pssm-ID: 320273 [Multi-domain]  Cd Length: 290  Bit Score: 64.07  E-value: 1.84e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259  59 SVFYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLRVLAPAldNSLCQAFAFFMSFFGLSSTLQLLAMALECWLSLGHPF 138
Cdd:cd15145   38 ASFLLLASGLVITDFFGHLINGTIAVFVYASDKDWIRFDQS--NILCSVFGICMVFFGLCPLLLGSVMAVERCIGVTKPI 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259 139 FYRRHITLRLGALVAPVVSAFSLAFCALPFMGFGKFVQYCPGTWCFIQMVHEEGSLSVLgYSVLYSSLMALLVLATVLCN 218
Cdd:cd15145  116 FHSTKMTSKHVKMMLSGVCLFAVLVALLPILGHRDYQIQASRTWCFYKTEHIEDWEDRF-YLLLFSFLGLLALAISFLCN 194
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259 219 LGAMRNLYAMHRRLQRHPRSctrdcaepRADGREASPQpleeldhllllalmtVLFTMCSLPVIYRAYYGAFKDVKEKNR 298
Cdd:cd15145  195 AITGITLLRVKFRSQQHRQG--------RSHHFEMVIQ---------------LLAIMCVSCICWSPFLVTMANIGINGR 251
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 530404259 299 TSEEAED--LRALRFLSVISIVDPWIFIIFRSPVFRIFF 335
Cdd:cd15145  252 DSLESCEtiLFALRMATWNQILDPWVYILLRKAVLKNLY 290
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
55-185 5.12e-10

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 59.53  E-value: 5.12e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259  55 RPLPSVFYMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLrvlapaLDNSLCQAFAFFMSFFGLSSTLQLLAMALECWLSL 134
Cdd:cd14969   29 KKLRTPLNLFLLNLALADLLMSVVGYPLSFYSNLSGRWS------FGDPGCVIYGFAVTFLGLVSISTLAALAFERYLVI 102
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 530404259 135 GHPFFYRRhITLRLGALVAPVVSAFSLAFCALPFMGFGKFVQYCPGTWCFI 185
Cdd:cd14969  103 VRPLKAFR-LSKRRALILIAFIWLYGLFWALPPLFGWSSYVPEGGGTSCSV 152
7tmA_Melanopsin-like cd15083
vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane ...
62-175 1.22e-06

vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represent the Gq-coupled rhodopsin subfamily consists of melanopsins, insect photoreceptors R1-R6, invertebrate Gq opsins as well as their closely related opsins. Melanopsins (also called Opsin-4) are the primary photoreceptor molecules for non-visual functions such as the photo-entrainment of the circadian rhythm and pupillary constriction in mammals. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. The outer photoreceptors (R1-R6) are the insect Drosophila equivalent to the vertebrate rods and are responsible for image formation and motion detection. The invertebrate G(q) opsins includes the arthropod and mollusk visual opsins as well as invertebrate melanopsins, which are also found in vertebrates. Arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. Members of this subfamily belong to the class A of the G protein-coupled receptors and have seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320211 [Multi-domain]  Cd Length: 291  Bit Score: 49.25  E-value: 1.22e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259  62 YMLVCGLTVTDLLGKCLLSPV-VLAAYAQNRSlrvlapaLDNSLCQAFAFFMSFFGLSSTLQLLAMALECWLSLGHPFFY 140
Cdd:cd15083   36 NYLIINLAISDFLMCILNCPLmVISSFSGRWI-------FGKTGCDMYGFSGGLFGIMSINTLAAIAVDRYLVITRPMKA 108
                         90       100       110
                 ....*....|....*....|....*....|....*
gi 530404259 141 RRHITLRLGALVAPVVSAFSLAFCALPFMGFGKFV 175
Cdd:cd15083  109 SVRISHRRALIVIAVVWLYSLLWVLPPLFGWSRYV 143
7tmA_Melanopsin cd15336
vertebrate melanopsins (Opsin-4), member of the class A family of seven-transmembrane G ...
48-183 1.12e-04

vertebrate melanopsins (Opsin-4), member of the class A family of seven-transmembrane G protein-coupled receptors; Melanopsin (also called Opsin-4) is the G protein-coupled photopigment that mediates non-visual responses to light. In mammals, these photoresponses include the photo-entrainment of circadian rhythm, pupillary constriction, and acute nocturnal melatonin suppression. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. Melanopsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320458 [Multi-domain]  Cd Length: 290  Bit Score: 43.55  E-value: 1.12e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259  48 WCSRRPLRPLPSVFYMlvcGLTVTDLLGKCLLSPVVLAAYAQNRSLrvlapaLDNSLCQAFAFFMSFFGLSSTLQLLAMA 127
Cdd:cd15336   25 FCRSKKLRTPANYFII---NLAVSDFLMSLTQSPIFFVNSLHKRWI------FGEKGCELYAFCGALFGITSMITLLAIS 95
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 530404259 128 LECWLSLGHPFFYRRHITLRLGALVAPVVSAFSLAFCALPFMGFGKFVQYCPGTWC 183
Cdd:cd15336   96 LDRYLVITKPLASIRWVSKKRAMIIILLVWLYSLAWSLPPLFGWSAYVPEGLLTSC 151
7tmA_GPR101 cd15215
orphan G protein-coupled receptor 101, member of the class A family of seven-transmembrane G ...
65-173 1.39e-04

orphan G protein-coupled receptor 101, member of the class A family of seven-transmembrane G protein-coupled receptors; Gpr101, an orphan GPCR, is predominantly expressed in the brain within discrete nuclei and is predicted to couple to the stimulatory G(s) protein, a potent activator of adenylate cyclase. GPR101 has been implicated in mediating the actions of GnRH-(1-5), a pentapeptide formed by metallopeptidase cleavage of the decapeptide gonadotropin-releasing hormone (GnRH), which plays a critical role in the regulation of the hypothalamic-pituitary-gonadal axis. GnRH-(1-5) acts on GPR101 to stimulate epidermal growth factor (EFG) release and EFG-receptor (EGFR) phosphorylation, leading to enhanced cell migration and invasion in the Ishikawa endometrial cancer cell line. Furthermore, these effects of GnRH-(1-5) are also dependent on enzymatic activation of matrix metallopeptidase-9 (MMP-9). GPR101 is a member of the class A family of GPCRs, which includes receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320343 [Multi-domain]  Cd Length: 261  Bit Score: 42.91  E-value: 1.39e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259  65 VCGLTVTDLLGKCLLSPVVLAAyaqnrSLRVLAPaLDNSLCQAFAFFMSFFGLSSTLQLLAMALECWLSLGHPFFYRRHI 144
Cdd:cd15215   38 IFNLLVADLLQTVLVMPWVIAT-----SVPLFWP-LDSHLCTALVVLMHLFAFAGVNTIVVVSVDRYLAIIHPLSYPTKM 111
                         90       100
                 ....*....|....*....|....*....
gi 530404259 145 TLRLGALVAPVVSAFSLAFCALPFMGFGK 173
Cdd:cd15215  112 TPRRGYLLIYGTWIVSVLQSTPPLYGWGQ 140
7tmA_Opsin_Gq_invertebrates cd15337
invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled ...
105-175 1.52e-04

invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; The invertebrate Gq-coupled opsin subfamily includes the arthropod and mollusc visual opsins. Like the vertebrate visual opsins, arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. The invertebrate Gq opsins are closely related to the vertebrate melanopsins, the primary photoreceptor molecules for non-visual responses to light, and the R1-R6 photoreceptors, which are the fly equivalent to the vertebrate rods. The Gq opsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320459 [Multi-domain]  Cd Length: 292  Bit Score: 43.08  E-value: 1.52e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 530404259 105 CQAFAFFMSFFGLSSTLQLLAMALECWLSLGHPFFYRRHITLRLGALVAPVVSAFSLAFCALPFMGFGKFV 175
Cdd:cd15337   74 CELYGFAGGIFGFMSITTLAAISIDRYLVIAKPLEAMKKMTFKRAFIMIIIIWLWSLLWSIPPFFGWGRYV 144
7tmA_EDG-like cd14972
endothelial differentiation gene family, member of the class A family of seven-transmembrane G ...
61-220 1.59e-03

endothelial differentiation gene family, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents the endothelial differentiation gene (Edg) family of G-protein coupled receptors, melanocortin/ACTH receptors, and cannabinoid receptors as well as their closely related receptors. The Edg GPCRs bind blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). Melanocortin receptors bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. Two types of cannabinoid receptors, CB1 and CB2, are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 341317 [Multi-domain]  Cd Length: 275  Bit Score: 39.58  E-value: 1.59e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259  61 FYMLVCGLTVTDLLGKCLlspVVLAAYAQNRSLRVLAPALDNSLcqaFAFFMSFFgLSSTLQLLAMALECWLSLGHPFFY 140
Cdd:cd14972   33 MYILIANLAAADLLAGIA---FVFTFLSVLLVSLTPSPATWLLR---KGSLVLSL-LASAYSLLAIAVDRYISIVHGLTY 105
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259 141 RRHITLRLGALVAPVVSAFSLAFCALPFMGFgkfvqycpgtWCFIQmvhEEGSLSVLG------YSVLYSSLMALLVLAT 214
Cdd:cd14972  106 VNNVTNKRVKVLIALVWVWSVLLALLPVLGW----------NCVLC---DQESCSPLGpglpksYLVLILVFFFIALVII 172

                 ....*.
gi 530404259 215 VLCNLG 220
Cdd:cd14972  173 VFLYVR 178
7tmA_Glycoprotein_LRR_R-like cd14980
glycoprotein hormone receptors and leucine-rich repeats containing G protein-coupled receptors, ...
48-170 1.92e-03

glycoprotein hormone receptors and leucine-rich repeats containing G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the glycoprotein hormone receptors (GPHRs), vertebrate receptors containing 17 leucine-rich repeats (LGR4-6), and the relaxin family peptide receptors (also known as LGR7 and LGR8). They are seven transmembrane domain receptors with a very large extracellular N-terminal domain containing many leucine-rich repeats responsible for hormone recognition and binding. The glycoprotein hormone receptor family contains receptors for the pituitary hormones, thyrotropin (thyroid-stimulating hormone receptor), follitropin (follicle-stimulating hormone receptor), and lutropin (luteinizing hormone receptor). Glycoprotein hormone receptors couple primarily to the G(s)-protein and promotes cAMP production, but also to the G(i)- or G(q)-protein. Two orphan GPCRs, LGR7 and LGR8, have been recently identified as receptors for the relaxin peptide hormones.


Pssm-ID: 320111 [Multi-domain]  Cd Length: 286  Bit Score: 39.53  E-value: 1.92e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259  48 WCSRRPLRPLPSvfyMLVCGLTVTDLL-GKCLLSPVVLAAYAQNRSLRVLAPALDNSLCQAFAFFMSFFGLSSTLQLLAM 126
Cdd:cd14980   26 ISSKKKKKKVPK---LLIINLAIADFLmGIYLLIIAIADQYYRGRYAQYSEEWLRSPPCLLACFLVSLSSLMSVLMMLLI 102
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 530404259 127 ALECWLSLGHPFFYRRhITLRLGALVAPVVSAFSLAFCALPFMG 170
Cdd:cd14980  103 TLDRYICIVYPFSNKR-LSYKSAKIILILGWLFSIIFAAIPILY 145
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
50-182 3.02e-03

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 39.15  E-value: 3.02e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259  50 SRRPLRPlpSVFYMLvCGLTVTDLLgkCLLSPVVLAAYaqnRSLRVLAPALDNSLCQAFAFFMSFFGL----SSTLQLLA 125
Cdd:cd14978   26 TRKSMRS--STNVYL-AALAVSDIL--VLLSALPLFLL---PYIADYSSSFLSYFYAYFLPYIYPLANtfqtASVWLTVA 97
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 530404259 126 MALECWLSLGHPFFYRRHITLRLGALVAPVVSAFSLAFCaLPFMgFGKFVQYCPGTW 182
Cdd:cd14978   98 LTVERYIAVCHPLKARTWCTPRRARRVILIIIIFSLLLN-LPRF-FEYEVVECENCN 152
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
55-183 7.16e-03

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 37.54  E-value: 7.16e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259  55 RPLPSVFYMLVCGLTVTDLLgkclLSPVVLAAYAQNRSLRVlaPALDNSLCQAFAFFMSFFGLSSTLQLLAMALECWLSL 134
Cdd:cd14967   28 RRLRTVTNYFIVSLAVADLL----VALLVMPFSAVYTLLGY--WPFGPVLCRFWIALDVLCCTASILNLCAISLDRYLAI 101
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 530404259 135 GHPFFYRRHITLRLGALVAPVVSAFSLAFCALPFMGFGKFVQYCPGTWC 183
Cdd:cd14967  102 TRPLRYRQLMTKKRALIMIAAVWVYSLLISLPPLVGWRDETQPSVVDCE 150
7tmA_GPR61_GPR62-like cd15220
G protein-coupled receptors 61 and 62, member of the class A family of seven-transmembrane G ...
62-170 9.45e-03

G protein-coupled receptors 61 and 62, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes the orphan receptors GPR61 and GPR62, which are both constitutively active and predominantly expressed in the brain. While GPR61 couples to G(s) subtype of G proteins, the signaling pathway and function of GPR 62 are unknown. GPR61-deficient mice displayed significant hyperphagia and heavier body weight compared to wild-type mice, suggesting that GPR61 is involved in the regulation of food intake and body weight. GPR61 transcript expression was found in the caudate, putamen, and thalamus of human brain, whereas GPR62 transcript expression was found in the basal forebrain, frontal cortex, caudate, putamen, thalamus, and hippocampus. Both receptors share the highest sequence homology with each other and comprise a conserved subgroup within the class A family of GPCRs, which includes receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, which then activate the heterotrimeric G proteins. Members of this subgroup contain [A/E]RY motif, a variant of the highly conserved Asp-Arg-Tyr (DRY) motif found in the third transmembrane helix (TM3) of the class A GPCRs and important for efficient G protein-coupled signal transduction.


Pssm-ID: 410633 [Multi-domain]  Cd Length: 264  Bit Score: 37.43  E-value: 9.45e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530404259  62 YMLVCGLTVTDLLGKCLLSPVVLAAYAQNRSLRVLAPALdnslCQAFAFFMSFFGLSSTLQLLAMALECWLSLGHPFFYR 141
Cdd:cd15220   33 FAFVCHLCVVDLLAALLLMPLGILSSSPFFLGVVFGEAE----CRVYIFLSVCLVSASILTISAISVERYYYIVHPMRYE 108
                         90       100
                 ....*....|....*....|....*....
gi 530404259 142 RHITLRLGALVAPVVSAFSLAFCALPFMG 170
Cdd:cd15220  109 VKMTIGLVAAVLVGVWVKALLLGLLPVLG 137
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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