|
Name |
Accession |
Description |
Interval |
E-value |
| DUF4174 |
pfam13778 |
Domain of unknown function (DUF4174); This domain of unknown function is found in a putative ... |
771-902 |
3.50e-42 |
|
Domain of unknown function (DUF4174); This domain of unknown function is found in a putative tumour suppressor gene and in a ligand for the the urokinase-type plasminogen activator receptor, which plays a role in cellular migration and adhesion.
Pssm-ID: 463980 Cd Length: 120 Bit Score: 149.71 E-value: 3.50e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 771 FLSRFRWRRRLLVISAPNDEDWAYSQQLSALSGQACNFGLRHITILKLLGVGEEVGGvlelfpingssVVEREDVPAHLV 850
Cdd:pfam13778 1 PLDQFRWKRRLLIISAPSADDPYYRQQLDALQAAECGLAERDLTVIELVGSGPNETG-----------KIEHEQLSPDLI 69
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 41152074 851 KDIRNYFQVSPEYFSMLLVGKDGNVKSWYPSPMwSMVIVYDLIDSMQLRRQE 902
Cdd:pfam13778 70 EELRKELGIPRNYFSMVLIGKDGGVKERYPAPV-SLEALFDLIDAMPMRQQE 120
|
|
| DUF4174 |
pfam13778 |
Domain of unknown function (DUF4174); This domain of unknown function is found in a putative ... |
615-748 |
2.15e-40 |
|
Domain of unknown function (DUF4174); This domain of unknown function is found in a putative tumour suppressor gene and in a ligand for the the urokinase-type plasminogen activator receptor, which plays a role in cellular migration and adhesion.
Pssm-ID: 463980 Cd Length: 120 Bit Score: 144.70 E-value: 2.15e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 615 LLGSFEGKRRLLLITAPKAENNMYVQQRDEYLESFCKMATRKISVITIFGPVNNSTMKIDHFQLDNEkpmrvvddedlvd 694
Cdd:pfam13778 1 PLDQFRWKRRLLIISAPSADDPYYRQQLDALQAAECGLAERDLTVIELVGSGPNETGKIEHEQLSPD------------- 67
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 41152074 695 qrLISELRKEYGMTYNDFFMVLTDVDLRVKQYYEVPITMKSVFDLIDTFQSRIK 748
Cdd:pfam13778 68 --LIEELRKELGIPRNYFSMVLIGKDGGVKERYPAPVSLEALFDLIDAMPMRQQ 119
|
|
| DUF4174 |
pfam13778 |
Domain of unknown function (DUF4174); This domain of unknown function is found in a putative ... |
142-270 |
2.08e-38 |
|
Domain of unknown function (DUF4174); This domain of unknown function is found in a putative tumour suppressor gene and in a ligand for the the urokinase-type plasminogen activator receptor, which plays a role in cellular migration and adhesion.
Pssm-ID: 463980 Cd Length: 120 Bit Score: 138.92 E-value: 2.08e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 142 LASFAGKNRVWVISAPHASEGYYRLMMSLLkDDVYCELAERHIQQIVLFHQAGEEGGKvrritsegqILEQPLDPSLIPK 221
Cdd:pfam13778 2 LDQFRWKRRLLIISAPSADDPYYRQQLDAL-QAAECGLAERDLTVIELVGSGPNETGK---------IEHEQLSPDLIEE 71
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 41152074 222 LMSFLKLEKGKFGMVLLKKTLQVEERYPYPVRLEAMYEVIDQGPIRRIE 270
Cdd:pfam13778 72 LRKELGIPRNYFSMVLIGKDGGVKERYPAPVSLEALFDLIDAMPMRQQE 120
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
313-461 |
2.27e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 51.86 E-value: 2.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 313 EDPRRAQVPPTRESRVKVLRKLAATAPALPQPPSTPRATTLPPA-----------PATTVTRSTSRAVTVAARPMTTTAF 381
Cdd:PHA03247 2681 QRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGpaaarqaspalPAAPAPPAVPAGPATPGGPARPARP 2760
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 382 PTTQRPWTPSPSHRPPTTTEVITARRP----SVSENLYPPSRKDQHRERPQTTRRPSKATSLESFTNAPPTTISEPSTRA 457
Cdd:PHA03247 2761 PTTAGPPAPAPPAAPAAGPPRRLTRPAvaslSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPP 2840
|
....
gi 41152074 458 AGPG 461
Cdd:PHA03247 2841 PPPG 2844
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
319-463 |
3.29e-03 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 41.29 E-value: 3.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 319 QVPPTRESRVKVLRKLAATAPALPQPPSTPRATTLPPAPATTVTRSTSRAVTVAARPMTTT--AFPTTQRPWTPSPSHRP 396
Cdd:pfam03154 425 PPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQHPFVPGGPPPITPPSGPPTSTssAMPGIQPPSSASVSSSG 504
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 41152074 397 PTTTeVITARRPSVSENLYPPSRKDQHRERPQTTRRPSkatslesftnAPPTTISEPStRAAGPGRF 463
Cdd:pfam03154 505 PVPA-AVSCPLPPVQIKEEALDEAEEPESPPPPPRSPS----------PEPTVVNTPS-HASQSARF 559
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| DUF4174 |
pfam13778 |
Domain of unknown function (DUF4174); This domain of unknown function is found in a putative ... |
771-902 |
3.50e-42 |
|
Domain of unknown function (DUF4174); This domain of unknown function is found in a putative tumour suppressor gene and in a ligand for the the urokinase-type plasminogen activator receptor, which plays a role in cellular migration and adhesion.
Pssm-ID: 463980 Cd Length: 120 Bit Score: 149.71 E-value: 3.50e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 771 FLSRFRWRRRLLVISAPNDEDWAYSQQLSALSGQACNFGLRHITILKLLGVGEEVGGvlelfpingssVVEREDVPAHLV 850
Cdd:pfam13778 1 PLDQFRWKRRLLIISAPSADDPYYRQQLDALQAAECGLAERDLTVIELVGSGPNETG-----------KIEHEQLSPDLI 69
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 41152074 851 KDIRNYFQVSPEYFSMLLVGKDGNVKSWYPSPMwSMVIVYDLIDSMQLRRQE 902
Cdd:pfam13778 70 EELRKELGIPRNYFSMVLIGKDGGVKERYPAPV-SLEALFDLIDAMPMRQQE 120
|
|
| DUF4174 |
pfam13778 |
Domain of unknown function (DUF4174); This domain of unknown function is found in a putative ... |
615-748 |
2.15e-40 |
|
Domain of unknown function (DUF4174); This domain of unknown function is found in a putative tumour suppressor gene and in a ligand for the the urokinase-type plasminogen activator receptor, which plays a role in cellular migration and adhesion.
Pssm-ID: 463980 Cd Length: 120 Bit Score: 144.70 E-value: 2.15e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 615 LLGSFEGKRRLLLITAPKAENNMYVQQRDEYLESFCKMATRKISVITIFGPVNNSTMKIDHFQLDNEkpmrvvddedlvd 694
Cdd:pfam13778 1 PLDQFRWKRRLLIISAPSADDPYYRQQLDALQAAECGLAERDLTVIELVGSGPNETGKIEHEQLSPD------------- 67
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 41152074 695 qrLISELRKEYGMTYNDFFMVLTDVDLRVKQYYEVPITMKSVFDLIDTFQSRIK 748
Cdd:pfam13778 68 --LIEELRKELGIPRNYFSMVLIGKDGGVKERYPAPVSLEALFDLIDAMPMRQQ 119
|
|
| DUF4174 |
pfam13778 |
Domain of unknown function (DUF4174); This domain of unknown function is found in a putative ... |
142-270 |
2.08e-38 |
|
Domain of unknown function (DUF4174); This domain of unknown function is found in a putative tumour suppressor gene and in a ligand for the the urokinase-type plasminogen activator receptor, which plays a role in cellular migration and adhesion.
Pssm-ID: 463980 Cd Length: 120 Bit Score: 138.92 E-value: 2.08e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 142 LASFAGKNRVWVISAPHASEGYYRLMMSLLkDDVYCELAERHIQQIVLFHQAGEEGGKvrritsegqILEQPLDPSLIPK 221
Cdd:pfam13778 2 LDQFRWKRRLLIISAPSADDPYYRQQLDAL-QAAECGLAERDLTVIELVGSGPNETGK---------IEHEQLSPDLIEE 71
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 41152074 222 LMSFLKLEKGKFGMVLLKKTLQVEERYPYPVRLEAMYEVIDQGPIRRIE 270
Cdd:pfam13778 72 LRKELGIPRNYFSMVLIGKDGGVKERYPAPVSLEALFDLIDAMPMRQQE 120
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
313-461 |
2.27e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 51.86 E-value: 2.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 313 EDPRRAQVPPTRESRVKVLRKLAATAPALPQPPSTPRATTLPPA-----------PATTVTRSTSRAVTVAARPMTTTAF 381
Cdd:PHA03247 2681 QRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGpaaarqaspalPAAPAPPAVPAGPATPGGPARPARP 2760
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 382 PTTQRPWTPSPSHRPPTTTEVITARRP----SVSENLYPPSRKDQHRERPQTTRRPSKATSLESFTNAPPTTISEPSTRA 457
Cdd:PHA03247 2761 PTTAGPPAPAPPAAPAAGPPRRLTRPAvaslSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPP 2840
|
....
gi 41152074 458 AGPG 461
Cdd:PHA03247 2841 PPPG 2844
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
303-462 |
3.18e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 51.48 E-value: 3.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 303 RPSLGSEKKKEDPRRAQV--PPTRESRVKVlrklAATAPALPQPPSTPrattlPPAPATTVTRSTSRAVTVAARPMTTTA 380
Cdd:PHA03247 2759 RPPTTAGPPAPAPPAAPAagPPRRLTRPAV----ASLSESRESLPSPW-----DPADPPAAVLAPAAALPPAASPAGPLP 2829
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 381 FPTTQRPWTPSPSHRPPTTTEVI---------TARRPSVSenlyPPSRKDQHRERPQTTR--RPSKATSLESFTNAPPTT 449
Cdd:PHA03247 2830 PPTSAQPTAPPPPPGPPPPSLPLggsvapggdVRRRPPSR----SPAAKPAAPARPPVRRlaRPAVSRSTESFALPPDQP 2905
|
170
....*....|...
gi 41152074 450 ISEPSTRAAGPGR 462
Cdd:PHA03247 2906 ERPPQPQAPPPPQ 2918
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
310-478 |
1.30e-05 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 49.30 E-value: 1.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 310 KKKEDPRRAQVPPTRESRVKVLRKLAATAPALPQPPSTPRATTLPPAPATTVTRSTSRAVTVAARPMTTTAFPTTQRPWT 389
Cdd:PTZ00449 577 KKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPKSPKLPELLDIPKSPKRPESPKSPKRPPPPQRPSSPERPEGPKIIKS 656
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 390 PSP--SHRPP------------------TTTEVITARRPSVSENLYPPSRKDQHRERPQTTRR--PSKATSLESFTNAPP 447
Cdd:PTZ00449 657 PKPpkSPKPPfdpkfkekfyddyldaaaKSKETKTTVVLDESFESILKETLPETPGTPFTTPRplPPKLPRDEEFPFEPI 736
|
170 180 190
....*....|....*....|....*....|.
gi 41152074 448 ttiSEPSTRAAGPGRFRDNRMDRREHGHRDP 478
Cdd:PTZ00449 737 ---GDPDAEQPDDIEFFTPPEEERTFFHETP 764
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
303-469 |
3.57e-05 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 47.56 E-value: 3.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 303 RPSLGSEKKKEDPRRAQVPPTRESRVKvlRKLAATAPAlPQPPSTPRATTLPP-APATTVTRSTSRAVTVAARPMTTTAF 381
Cdd:PRK12323 416 ARAVAAAPARRSPAPEALAAARQASAR--GPGGAPAPA-PAPAAAPAAAARPAaAGPRPVAAAAAAAPARAAPAAAPAPA 492
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 382 PTTQRPWTPSPSHRP-PTTTEVITARRPSVSENLYPPSRKDQHRERPQTTRRPSKATslesftnAPPTTISEPSTRAAGP 460
Cdd:PRK12323 493 DDDPPPWEELPPEFAsPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAP-------APRAAAATEPVVAPRP 565
|
....*....
gi 41152074 461 GRFRDNRMD 469
Cdd:PRK12323 566 PRASASGLP 574
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
317-470 |
4.51e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 47.63 E-value: 4.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 317 RAQVPPTRESRVKVLRKLAATAPALPQPPSTPRATTLPPAPATTVTRSTS--RAVTVAARPMTTTAFPTTQRPWTPS--P 392
Cdd:PHA03247 2729 RQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGppRRLTRPAVASLSESRESLPSPWDPAdpP 2808
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 393 SHRPPTTTEVITARRPSVSEnlyPPSRKDQHRERPQTTRRPSKATSLES-------FTNAPPTtiSEPSTRAAGPGRFRD 465
Cdd:PHA03247 2809 AAVLAPAAALPPAASPAGPL---PPPTSAQPTAPPPPPGPPPPSLPLGGsvapggdVRRRPPS--RSPAAKPAAPARPPV 2883
|
....*
gi 41152074 466 NRMDR 470
Cdd:PHA03247 2884 RRLAR 2888
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
334-461 |
4.29e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 44.54 E-value: 4.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 334 LAATAPALPQPPSTPrattlPPAPATTV--TRSTSRAVTVAA-----RPMTTTAFPTTQRP-WTPSPS-------HRPPT 398
Cdd:PHA03247 302 LAGAPLALPAPPDPP-----PPAPAGDAeeEDDEDGAMEVVSplprpRQHYPLGFPKRRRPtWTPPSSledlsagRHHPK 376
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 41152074 399 TTEVITARRPSVSENLYPPSR----KDQHRERPQTTRRPSKATSLESFTNAPPTTISEPSTRAAGPG 461
Cdd:PHA03247 377 RASLPTRKRRSARHAATPFARgpggDDQTRPAAPVPASVPTPAPTPVPASAPPPPATPLPSAEPGSD 443
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
315-458 |
5.71e-04 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 43.00 E-value: 5.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 315 PRRAQVPPTRE--SRVKVLRKL--AATAPALPQPPSTPRA-TTLPPAPATTVtrstsrAVTVAARPMTTTAFPTTQRPWT 389
Cdd:PRK10905 80 PTQGQTPVATDgqQRVEVQGDLnnALTQPQNQQQLNNVAVnSTLPTEPATVA------PVRNGNASRQTAKTQTAERPAT 153
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 390 PspshRPPTTTEVITARRPSVSENLYP-PSRKDQHRERPQTTRRPSKATSLESFTNAPPTTISEPSTRAA 458
Cdd:PRK10905 154 T----RPARKQAVIEPKKPQATAKTEPkPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTAS 219
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
312-462 |
8.01e-04 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.39 E-value: 8.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 312 KEDPRRAQVPPtRESRVKVLRKLAATAPAlPQPPSTPRATTLPP--APATTVTRSTSRAVTVAARPM-TTTAFPTTQRPW 388
Cdd:PHA03247 2649 PERPRDDPAPG-RVSRPRRARRLGRAAQA-SSPPQRPRRRAARPtvGSLTSLADPPPPPPTPEPAPHaLVSATPLPPGPA 2726
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 41152074 389 TPSPSHRPPTTTeviTARRPSVSENLYPPSrkDQHRERPQTTRRPSKATSLESFTNAPPTTISEPSTRAAGPGR 462
Cdd:PHA03247 2727 AARQASPALPAA---PAPPAVPAGPATPGG--PARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESR 2795
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
335-459 |
9.08e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 43.30 E-value: 9.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 335 AATAPALPQPPSTPRATTLPPAPATTVTRSTSRAVTVA------ARPMTTTAFPTTQRPWTPSPSHRPPTTTEVITARRP 408
Cdd:PRK07003 413 KAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPakanarASADSRCDERDAQPPADSGSASAPASDAPPDAAFEP 492
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 41152074 409 S-----VSENLYPPSRKDQHRERPQTTRRPSKATSLESFTNAPPTTISEPSTRAAG 459
Cdd:PRK07003 493 ApraaaPSAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAAAPAARAGG 548
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
338-450 |
1.05e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 43.13 E-value: 1.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 338 APALPQPPstPRATT-LPPAPATTVTRSTSRAVTVAARPMTTTafPTTQRPWTPSPSHRPPTTTEVITARRPSVSENLYP 416
Cdd:PHA03378 690 APGTMQPP--PRAPTpMRPPAAPPGRAQRPAAATGRARPPAAA--PGRARPPAAAPGRARPPAAAPGRARPPAAAPGRAR 765
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 41152074 417 PSRKDQHRERPQ--------TTRRPSKATSLESFTNAPPTTI 450
Cdd:PHA03378 766 PPAAAPGAPTPQpppqappaPQQRPRGAPTPQPPPQAGPTSM 807
|
|
| PRK14951 |
PRK14951 |
DNA polymerase III subunits gamma and tau; Provisional |
303-433 |
1.55e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237865 [Multi-domain] Cd Length: 618 Bit Score: 42.39 E-value: 1.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 303 RPSLGSEKKKEDPRRAQVPPTRESRVKVLRKLAATAPAlPQPPstPRATTLPPAPATTVTRSTSRAVTVAARPMTTTAFP 382
Cdd:PRK14951 365 KPAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPA-PAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAA 441
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 41152074 383 TTQRPWTPSPSHRPPTTTEVITARrpsVSENLYPPSRKDQHRERPQTTRRP 433
Cdd:PRK14951 442 PAAVALAPAPPAQAAPETVAIPVR---VAPEPAVASAAPAPAAAPAAARLT 489
|
|
| PRK10905 |
PRK10905 |
cell division protein DamX; Validated |
311-393 |
1.68e-03 |
|
cell division protein DamX; Validated
Pssm-ID: 236792 [Multi-domain] Cd Length: 328 Bit Score: 41.85 E-value: 1.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 311 KKEDPRRAQVP-PTRESRVKVLRKLAATAPALPQPPSTPRATTLPPAPATTvTRSTSRAVTVAARPMTTTAFPTTQRPWT 389
Cdd:PRK10905 144 KTQTAERPATTrPARKQAVIEPKKPQATAKTEPKPVAQTPKRTEPAAPVAS-TKAPAATSTPAPKETATTAPVQTASPAQ 222
|
....
gi 41152074 390 PSPS 393
Cdd:PRK10905 223 TTAT 226
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
320-460 |
1.79e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.62 E-value: 1.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 320 VPPTRESRVKVLRKLA---ATAPALPQPPS-----------TPRATTLPPAPATTVTRSTSRAVTVAARPMTTTAfPTTQ 385
Cdd:PHA03247 2529 VHPRMLTWIRGLEELAsddAGDPPPPLPPAappaapdrsvpPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVD-DRGD 2607
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 386 RPWTPSPSHRPPTTTEV---ITARRPSVSE------NLYPPSRKDQHRERPQTTRRPSKATSLESFTNAPPTTiSEPSTR 456
Cdd:PHA03247 2608 PRGPAPPSPLPPDTHAPdppPPSPSPAANEpdphppPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPP-QRPRRR 2686
|
....
gi 41152074 457 AAGP 460
Cdd:PHA03247 2687 AARP 2690
|
|
| PHA03381 |
PHA03381 |
tegument protein VP22; Provisional |
303-390 |
2.42e-03 |
|
tegument protein VP22; Provisional
Pssm-ID: 177618 [Multi-domain] Cd Length: 290 Bit Score: 41.15 E-value: 2.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 303 RPSLGSEKKKEDPRRAQVPP-TRESRVKVLRKLAATAPALPQPPSTPR--------ATTLPPAPATTVTRSTSRAVTVAA 373
Cdd:PHA03381 92 RPHAQPEASGPGPARGARGPaGSRGRGRRAESPSPRDPPNPKGASAPRgrksacadSAALLDAPAPAAPKRQKTPAGLAR 171
|
90
....*....|....*..
gi 41152074 374 RPMTTTAFPTTQRPWTP 390
Cdd:PHA03381 172 KLHFSTAPTSPTAPWTP 188
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
330-424 |
2.75e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 41.33 E-value: 2.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 330 VLRKLAATAPALPQPPSTP-----RATTLPPAPATTVTRSTSRAVTVAARPMTTTAFPTTQRPWTPSPShRPPTTTEVIT 404
Cdd:PRK14950 359 LLVPVPAPQPAKPTAAAPSpvrptPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVPHTPES-APKLTRAAIP 437
|
90 100
....*....|....*....|
gi 41152074 405 ARRPSVSENlyPPSRKDQHR 424
Cdd:PRK14950 438 VDEKPKYTP--PAPPKEEEK 455
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
319-463 |
3.29e-03 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 41.29 E-value: 3.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 319 QVPPTRESRVKVLRKLAATAPALPQPPSTPRATTLPPAPATTVTRSTSRAVTVAARPMTTT--AFPTTQRPWTPSPSHRP 396
Cdd:pfam03154 425 PPPPAQPPVLTQSQSLPPPAASHPPTSGLHQVPSQSPFPQHPFVPGGPPPITPPSGPPTSTssAMPGIQPPSSASVSSSG 504
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 41152074 397 PTTTeVITARRPSVSENLYPPSRKDQHRERPQTTRRPSkatslesftnAPPTTISEPStRAAGPGRF 463
Cdd:pfam03154 505 PVPA-AVSCPLPPVQIKEEALDEAEEPESPPPPPRSPS----------PEPTVVNTPS-HASQSARF 559
|
|
| Pneumo_att_G |
pfam05539 |
Pneumovirinae attachment membrane glycoprotein G; |
339-434 |
3.46e-03 |
|
Pneumovirinae attachment membrane glycoprotein G;
Pssm-ID: 114270 [Multi-domain] Cd Length: 408 Bit Score: 40.80 E-value: 3.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 339 PALPQPPSTPRATTLPPAPATTVTRSTSRAVTVAARPMTTTAFPTTQRPWTPSPSHRPPTTTEVITARRPSVSenlypPS 418
Cdd:pfam05539 232 PQTEPPPSQRGPSGSPQHPPSTTSQDQSTTGDGQEHTQRRKTPPATSNRRSPHSTATPPPTTKRQETGRPTPR-----PT 306
|
90
....*....|....*.
gi 41152074 419 RKDQHRERPQTTRRPS 434
Cdd:pfam05539 307 ATTQSGSSPPHSSPPG 322
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
315-462 |
4.05e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 41.01 E-value: 4.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 315 PRRAQVPPTRESRVKVLRklAATAPALPQPPSTPRATTLPPAPATTvTRSTSRAVTVAARPMTT-----TAFPTTQRPWT 389
Cdd:PRK12323 381 PVAQPAPAAAAPAAAAPA--PAAPPAAPAAAPAAAAAARAVAAAPA-RRSPAPEALAAARQASArgpggAPAPAPAPAAA 457
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 390 PSPSHRPPT----TTEVITARRPSVSENLYPPSRKDQH----RERPQTTRRPSKATSLESFTNAPPTTISEPSTRAAGPG 461
Cdd:PRK12323 458 PAAAARPAAagprPVAAAAAAAPARAAPAAAPAPADDDpppwEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDA 537
|
.
gi 41152074 462 R 462
Cdd:PRK12323 538 F 538
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
303-408 |
5.63e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 40.69 E-value: 5.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 303 RPSLGSEKKKEdPRRAQVPPTRESRVKVLRKLAATAPA-LPQPPSTPRATTLPPAPATTVTRST-----SRAVTVAARPM 376
Cdd:PHA03247 377 RASLPTRKRRS-ARHAATPFARGPGGDDQTRPAAPVPAsVPTPAPTPVPASAPPPPATPLPSAEpgsddGPAPPPERQPP 455
|
90 100 110
....*....|....*....|....*....|..
gi 41152074 377 TTTAFPTtqrpwTPSPSHRPPTTTEVITARRP 408
Cdd:PHA03247 456 APATEPA-----PDDPDDATRKALDALRERRP 482
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
307-456 |
5.97e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 40.69 E-value: 5.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 307 GSEKKKEDPRRAQVPPTRESRVKVlRKLAATAPA-----LPQPPSTPRATTLPPAPATTVTRSTSRAvtvaaRPMTTTAF 381
Cdd:PHA03247 2860 GDVRRRPPSRSPAAKPAAPARPPV-RRLARPAVSrstesFALPPDQPERPPQPQAPPPPQPQPQPPP-----PPQPQPPP 2933
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 41152074 382 PTTQRPWTPSPSHRPPTTTEVITARRPSVSENLYPPSRKDQHRerpqtTRRPSKATSLESFTNAPPTTISEPSTR 456
Cdd:PHA03247 2934 PPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPR-----FRVPQPAPSREAPASSTPPLTGHSLSR 3003
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
304-459 |
7.88e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 40.31 E-value: 7.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 304 PSLGSEKKKEDPRRAQVPPTRESRVKVLRKLAATAPALPQPPSTPRATTLPPAPATTVTRSTSRAVTVAARPMTTTAFP- 382
Cdd:PHA03247 2891 VSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPg 2970
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 383 ---------TTQRPWTPSPSHRPPTTTEVITAR----------------RP-SVSENLYPPSrKDQHRERPQTTRRPSKA 436
Cdd:PHA03247 2971 rvavprfrvPQPAPSREAPASSTPPLTGHSLSRvsswasslalheetdpPPvSLKQTLWPPD-DTEDSDADSLFDSDSER 3049
|
170 180
....*....|....*....|....*....
gi 41152074 437 TSLESF------TNAPPTTISEPSTRAAG 459
Cdd:PHA03247 3050 SDLEALdplppePHDPFAHEPDPATPEAG 3078
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
304-461 |
9.82e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 39.92 E-value: 9.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 41152074 304 PSLGSEKKKEDPRRAQVPPTRESRVKVLRKLAATAPALPQPPSTPRATTLPPAPATTVTRSTSRAVTVAARPMTTTAFPT 383
Cdd:PHA03247 2560 PPAAPDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAANEPD 2639
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 41152074 384 TQRPWTPSPSHRPPTTTEVITARRPSVSENLYPPSRKDQHRERPQTTRRPSKATSLESFTNAP-PTTISEPSTRAAGPG 461
Cdd:PHA03247 2640 PHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPpPPPTPEPAPHALVSA 2718
|
|
|