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Conserved domains on  [gi|22128953|ref|NP_667201|]
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olfactory receptor family 10 subfamily Q member 1 [Mus musculus]

Protein Classification

olfactory receptor( domain architecture ID 11607024)

olfactory receptor plays a central role in olfaction or the sense of smell, similar to human family 10, subfamily A olfactory receptors; belongs to the class A rhodopsin-like family of G protein-coupled receptors; binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf)

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tmA_OR10A-like cd15225
olfactory receptor subfamily 10A and related proteins, member of the class A family of ...
41-306 9.31e-163

olfactory receptor subfamily 10A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10A, 10C, 10H, 10J, 10V, 10R, 10J, 10W, among others, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


:

Pssm-ID: 320353  Cd Length: 277  Bit Score: 454.22  E-value: 9.31e-163
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15225  13 VTLLGNLLIILITKVDPALHTPMYFFLRNLSFLEICYTSVIVPKMLVNLLSEDKTISFLGCATQMFFFLFLGGTECFLLA 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHdQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15225  93 AMAYDRYVAICNPLRYTLIMNRRVCLQLVAGSWLSGILVSLGQTTLIFSLPFCGS-NEINHFFCDIPPVLKLACADTSLN 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15225 172 EIAIFVASVLVILVPFLLILVSYIFIISTILKIPSAEGRRKAFSTCSSHLIVVTLFYGCASFTYLRPKSSYSPETDKLLS 251
                       250       260
                ....*....|....*....|....*.
gi 22128953 281 LVYTFVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15225 252 LFYTVVTPMLNPIIYSLRNKEVKGAL 277
 
Name Accession Description Interval E-value
7tmA_OR10A-like cd15225
olfactory receptor subfamily 10A and related proteins, member of the class A family of ...
41-306 9.31e-163

olfactory receptor subfamily 10A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10A, 10C, 10H, 10J, 10V, 10R, 10J, 10W, among others, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320353  Cd Length: 277  Bit Score: 454.22  E-value: 9.31e-163
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15225  13 VTLLGNLLIILITKVDPALHTPMYFFLRNLSFLEICYTSVIVPKMLVNLLSEDKTISFLGCATQMFFFLFLGGTECFLLA 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHdQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15225  93 AMAYDRYVAICNPLRYTLIMNRRVCLQLVAGSWLSGILVSLGQTTLIFSLPFCGS-NEINHFFCDIPPVLKLACADTSLN 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15225 172 EIAIFVASVLVILVPFLLILVSYIFIISTILKIPSAEGRRKAFSTCSSHLIVVTLFYGCASFTYLRPKSSYSPETDKLLS 251
                       250       260
                ....*....|....*....|....*.
gi 22128953 281 LVYTFVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15225 252 LFYTVVTPMLNPIIYSLRNKEVKGAL 277
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
41-307 2.30e-43

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 149.96  E-value: 2.30e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953    41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:pfam13853   7 IIFLGNGTILFVIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSIMESAVLL 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953   121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQeINHFLCDVPPVLRLACADIHVH 200
Cdd:pfam13853  87 AMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHV-LSHSYCLHMGLARLSCADIKVN 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953   201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQI- 279
Cdd:pfam13853 166 NIYGLFVVTSTFGIDSLLIVLSYGLILRTVLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSMVHRFGHNVPPLLQIm 245
                         250       260
                  ....*....|....*....|....*....
gi 22128953   280 -ALVYTFVTPLLNPLIYTLRNKDVKGALK 307
Cdd:pfam13853 246 mANAYLFFPPVLNPIVYSVKTKQIRDCVK 274
 
Name Accession Description Interval E-value
7tmA_OR10A-like cd15225
olfactory receptor subfamily 10A and related proteins, member of the class A family of ...
41-306 9.31e-163

olfactory receptor subfamily 10A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10A, 10C, 10H, 10J, 10V, 10R, 10J, 10W, among others, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320353  Cd Length: 277  Bit Score: 454.22  E-value: 9.31e-163
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15225  13 VTLLGNLLIILITKVDPALHTPMYFFLRNLSFLEICYTSVIVPKMLVNLLSEDKTISFLGCATQMFFFLFLGGTECFLLA 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHdQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15225  93 AMAYDRYVAICNPLRYTLIMNRRVCLQLVAGSWLSGILVSLGQTTLIFSLPFCGS-NEINHFFCDIPPVLKLACADTSLN 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15225 172 EIAIFVASVLVILVPFLLILVSYIFIISTILKIPSAEGRRKAFSTCSSHLIVVTLFYGCASFTYLRPKSSYSPETDKLLS 251
                       250       260
                ....*....|....*....|....*.
gi 22128953 281 LVYTFVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15225 252 LFYTVVTPMLNPIIYSLRNKEVKGAL 277
7tmA_OR cd13954
olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled ...
41-299 2.22e-131

olfactory receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320092 [Multi-domain]  Cd Length: 270  Bit Score: 374.51  E-value: 2.22e-131
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd13954  13 LTLLGNLLIILLVRLDSRLHTPMYFFLSNLSFLDICYTSVTVPKMLANLLSGDKTISFSGCLTQLYFFFSLGGTECFLLA 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHdQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd13954  93 VMAYDRYVAICHPLHYPTIMNKRVCILLAAGSWLIGFLNSLIHTVLISQLPFCGS-NVINHFFCDIPPLLKLSCSDTSLN 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd13954 172 ELVIFILAGFVGLGSFLLTLVSYIYIISTILKIPSAEGRQKAFSTCASHLTVVSLFYGTIIFMYVRPSSSYSSDLDKVVS 251
                       250
                ....*....|....*....
gi 22128953 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd13954 252 VFYTVVTPMLNPIIYSLRN 270
7tmA_OR2T-like cd15421
olfactory receptor subfamily 2T and related proteins, member of the class A family of ...
41-306 5.22e-120

olfactory receptor subfamily 2T and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 2T, 2M, 2L, 2V, 2Z, 2AE, 2AG, 2AK, 2AJ, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320543  Cd Length: 277  Bit Score: 346.07  E-value: 5.22e-120
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15421  13 VALTGNALLILLIWLDSRLHTPMYFLLSQLSLMDLMLISTTVPKMATNFLSGRKSISFVGCGTQIFFFLTLGGAECLLLA 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHdQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15421  93 LMAYDRYVAICHPLRYPVLMSPRVCLLMAAGSWLGGSLNSLIHTVYTMHFPYCGS-REIHHFFCEVPALLKLSCADTSAY 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15421 172 ETVVYVSGVLFLLIPFSLILASYALILLTVLRMRSAEGRKKALATCSSHLTVVSLYYGPAIFTYMRPGSYHSPEQDKVVS 251
                       250       260
                ....*....|....*....|....*.
gi 22128953 281 LVYTFVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15421 252 VFYTILTPMLNPLIYSLRNKEVLGAL 277
7tmA_OR5V1-like cd15231
olfactory receptor subfamily 5V1 and related proteins, member of the class A family of ...
41-306 1.94e-118

olfactory receptor subfamily 5V1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5V1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320359 [Multi-domain]  Cd Length: 277  Bit Score: 341.94  E-value: 1.94e-118
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15231  13 VTLLGNLLIITLVLLDSHLHTPMYFFLSNLSFLDICYTSVTVPKMLVNLLRERKTISYIGCLAQLFFFVSFVGTECLLLA 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGhDQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15231  93 VMAYDRYVAICNPLHYAVIMSRKVCLQLAAASWLCGFLNSAVHTVLTFRLSFCG-SNQISHFFCDIPPLLKLSCSDTSLN 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15231 172 EVLLLVASVFIGLTPFLFIVISYVYIISTILKIRSAEGRRKAFSTCASHLTVVTLFYGTAIFNYNRPSSGYSLDKDTLIS 251
                       250       260
                ....*....|....*....|....*.
gi 22128953 281 LVYTFVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15231 252 VLYSIVTPMLNPIIYSLRNKEVKGAL 277
7tmA_OR2-like cd15237
olfactory receptor family 2 and related proteins, member of the class A family of ...
41-299 4.05e-117

olfactory receptor family 2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 2 and 13, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320365 [Multi-domain]  Cd Length: 270  Bit Score: 338.48  E-value: 4.05e-117
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15237  13 LTLLGNGLIILLIWLDSRLHTPMYFFLSNLSLLDICYTTSTVPQMLVHLLSEHKTISFVGCAAQMFFFLALGVTECVLLA 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDqEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15237  93 VMAYDRYVAICNPLRYSVIMSRRVCVRLAATSWASGFLNSLVLTSLTLRLPFCGPN-HINHFFCEAPAVLKLACADTSLN 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15237 172 EAVIFVTSVLVLLIPFSLILASYIRILATILRIQSAEGRKKAFSTCASHLTVVTLFYGTAIFMYMRPHSTHSPDQDKMIS 251
                       250
                ....*....|....*....
gi 22128953 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd15237 252 VFYTIVTPMLNPLIYSLRN 270
7tmA_OR5-like cd15230
olfactory receptor family 5 and related proteins, member of the class A family of ...
41-299 1.65e-116

olfactory receptor family 5 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 5, some subfamilies from families 8 and 9, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320358  Cd Length: 270  Bit Score: 336.79  E-value: 1.65e-116
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15230  13 ITLVGNLGMIVLIRIDSRLHTPMYFFLSNLSFVDICYSSVITPKMLVNFLSEKKTISFAGCAAQFFFFAVFGTTECFLLA 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQeINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15230  93 AMAYDRYVAICNPLLYTVIMSKRVCIQLVAGSYLCGFVNSIVHTSSTFSLSFCGSNV-INHFFCDIPPLLKLSCSDTHIN 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15230 172 ELVLFAFSGFIGLSTLLIILISYLYILITILRIRSAEGRRKAFSTCASHLTAVSLFYGTLIFMYLRPSSSYSLDQDKVVS 251
                       250
                ....*....|....*....
gi 22128953 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd15230 252 VFYTVVIPMLNPLIYSLRN 270
7tmA_OR1A-like cd15235
olfactory receptor subfamily 1A and related proteins, member of the class A family of ...
43-306 1.09e-115

olfactory receptor subfamily 1A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1A, 1B, 1K, 1L, 1Q and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320363 [Multi-domain]  Cd Length: 278  Bit Score: 334.96  E-value: 1.09e-115
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15235  16 LLGNLLIVLLIRSDPRLHTPMYFFLSHLSLVDICFTSTTVPKMLANLLSGSKTISYAGCLAQMYFFIAFGNTDSFLLAVM 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGhDQEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15235  96 AYDRYVAICHPLHYATVMSPKRCLLLVAGSWLLSHLHSLLHTLLMSRLSFCG-SNEIPHFFCDLQPLLKLSCSDTSLNEL 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 203 VLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALV 282
Cdd:cd15235 175 LIFTEGAVVVLGPFLLIVLSYARILAAVLKVPSAAGRRKAFSTCGSHLTVVALFYGTIIGVYFQPSSSYSADKDRVATVM 254
                       250       260
                ....*....|....*....|....
gi 22128953 283 YTFVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15235 255 YTVVTPMLNPFIYSLRNKDVKGAL 278
7tmA_OR6C-like cd15912
olfactory receptor subfamily 6C and related proteins, member of the class A family of ...
41-299 4.24e-112

olfactory receptor subfamily 6C and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6C, 6X, 6J, 6T, 6V, 6M, 9A, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320578  Cd Length: 270  Bit Score: 325.59  E-value: 4.24e-112
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15912  13 LTLLGNLLIITITLVDHRLHTPMYFFLRNFSFLEILFTSVVIPKMLANLLSGKKTISFAGCFAQSFFYFFLGTTEFFLLA 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQeINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15912  93 VMSFDRYVAICNPLHYPTIMNSRVCLQLVLGSWVGGFLLILPPTILVFQLPFCGPNV-INHFFCDSGPLLKLSCSDTRLI 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15912 172 ELLDFILASVVLLGSLLLTIVSYIYIISTILRIPSASGRQKAFSTCASHLTVVSIFYGSCIFMYVRPSQSSSLDLNKVVA 251
                       250
                ....*....|....*....
gi 22128953 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd15912 252 LLNTVVTPLLNPFIYTLRN 270
7tmA_OR8S1-like cd15229
olfactory receptor subfamily 8S1 and related proteins, member of the class A family of ...
41-306 1.95e-111

olfactory receptor subfamily 8S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 8S1 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320357 [Multi-domain]  Cd Length: 277  Bit Score: 324.16  E-value: 1.95e-111
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15229  13 LTLLGNLLIMLVIRADSHLHTPMYFFLSHLSFLDICYSSVTVPKMLENLLSERKTISVEGCIAQIFFFFFFAGTEAFLLS 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHdQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15229  93 AMAYDRYAAICHPLHYVQIMSKQVCVQLVGGAWALGFLYALINTLLLLNLHFCGP-NEINHFSCELPSLLPLSCSDTFAN 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15229 172 KMVLLTSSVIFGLGSFLLTLVSYIHIISTILRIRSAEGRSKAFSTCSSHLTVVGLFYGTGFFRYLRPNSASSSVLDRVFS 251
                       250       260
                ....*....|....*....|....*.
gi 22128953 281 LVYTFVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15229 252 IQYSILTPMLNPIIYSLKNKEVKAAL 277
7tmA_OR2A-like cd15420
olfactory receptor subfamily 2A and related proteins, member of the class A family of ...
42-306 4.18e-110

olfactory receptor subfamily 2A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320542 [Multi-domain]  Cd Length: 277  Bit Score: 320.81  E-value: 4.18e-110
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  42 ILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAV 121
Cdd:cd15420  14 TLLGNGLILGLIWLDSRLHTPMYFFLSHLAVVDICYASSTVPHMLGNLLKQRKTISFAGCGTQMYLFLALAHTECVLLAV 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 122 MAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGhDQEINHFLCDVPPVLRLACADIHVHQ 201
Cdd:cd15420  94 MSYDRYVAICHPLRYTVIMNWRVCTTLAATSWACGFLLALVHVVLLLRLPFCG-PNEVNHFFCEILAVLKLACADTWINE 172
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 202 AVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIAL 281
Cdd:cd15420 173 ILIFAGCVFILLGPFSLILISYLHILAAILKIQSAEGRRKAFSTCSSHLCVVGLFYGTAMFMYMVPGSSNSAEQEKILSL 252
                       250       260
                ....*....|....*....|....*
gi 22128953 282 VYTFVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15420 253 FYSLFNPMLNPLIYSLRNKQVKGAL 277
7tmA_OR1_7-like cd15918
olfactory receptor families 1, 7, and related proteins, member of the class A family of ...
45-299 1.49e-108

olfactory receptor families 1, 7, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 1 and 7, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320584 [Multi-domain]  Cd Length: 270  Bit Score: 316.48  E-value: 1.49e-108
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMAY 124
Cdd:cd15918  17 GNLLIILAIGSDSHLHTPMYFFLANLSLVDICFTSTTVPKMLVNIQTQSKSISYAGCLTQMYFFLLFGDLDNFLLAVMAY 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 125 DRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGhDQEINHFLCDVPPVLRLACADIHVHQAVL 204
Cdd:cd15918  97 DRYVAICHPLHYTTIMSPRLCILLVAASWVITNLHSLLHTLLMARLSFCA-SNEIPHFFCDLNPLLKLSCSDTHLNELVI 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 205 YVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALVYT 284
Cdd:cd15918 176 LVLGGLVGLVPFLCILVSYVRIVSAVLRIPSAGGKWKAFSTCGSHLSVVSLFYGTVIGVYLSPPSSHSASKDSVAAVMYT 255
                       250
                ....*....|....*
gi 22128953 285 FVTPLLNPLIYTLRN 299
Cdd:cd15918 256 VVTPMLNPFIYSLRN 270
7tmA_OR11A-like cd15911
olfactory receptor subfamily 11A and related proteins, member of the class A family of ...
41-299 2.36e-108

olfactory receptor subfamily 11A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11A and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320577  Cd Length: 270  Bit Score: 315.96  E-value: 2.36e-108
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15911  13 VTMAGNILIIVLVVADRHLHTPMYFFLGNLSCLEICYTSTILPRMLASLLTGDRTISVSGCIVQFYFFGSLAATECYLLA 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGhDQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15911  93 VMSYDRYLAICKPLHYASLMNGRLCLQLAAGSWISGFLASTITVILMSQLTFCG-PNEIDHFFCDFAPLLKLSCSDTSLV 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15911 172 ELVTFILSSIVTLPPFLLTLTSYICIISTILRIPSTTGRQKAFSTCSSHLIVVTIFYGTLIIVYVVPSTNTSRDLNKVFS 251
                       250
                ....*....|....*....
gi 22128953 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd15911 252 LFYTVLTPLVNPLIYSLRN 270
7tmA_OR13H-like cd15431
olfactory receptor subfamily 13H and related proteins, member of the class A family of ...
43-299 2.75e-108

olfactory receptor subfamily 13H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 13H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320548 [Multi-domain]  Cd Length: 269  Bit Score: 315.70  E-value: 2.75e-108
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15431  15 LLGNGLIILLIRVDSQLHTPMYFFLSNLSFLDICYTTSSVPQMLVNCLSDRPTISYSRCLAQMYISLFLGITECLLLAVM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLqLTALIFTLPFCGHdQEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15431  95 AYDRFVAICNPLRYTLIMSWRVCIQLAAGSWVSAFLLTV-IPVLTMPLHFCGP-NVINHFFCEVQALLKLACSDTSLNEI 172
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 203 VLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALV 282
Cdd:cd15431 173 LMFATSIFTLLLPFSFILVSYIRIGVAVLRIRSAEGRRKAFSTCGSHLTVVTIFYGTAIFMYLRPQSKSSSDQDKIISVF 252
                       250
                ....*....|....*..
gi 22128953 283 YTFVTPLLNPLIYTLRN 299
Cdd:cd15431 253 YGVVTPMLNPLIYSLRN 269
7tmA_OR2B-like cd15947
olfactory receptor subfamily 2B and related proteins, member of the class A family of ...
41-299 1.13e-107

olfactory receptor subfamily 2B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 2 (subfamilies 2B, 2C, 2G, 2H, 2I, 2J, 2W, 2Y) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320613 [Multi-domain]  Cd Length: 270  Bit Score: 314.56  E-value: 1.13e-107
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15947  13 LTLLGNTAIILLSLLDPRLHTPMYFFLSNLSFLDLCFTTSIVPQMLVNLWGPDKTISYGGCVTQLYIFLWLGSTECVLLA 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQeINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15947  93 VMAFDRYVAVCRPLHYTVIMHPRLCVQLAALSWLSGLANSLLQTTLTLQLPLCGHHT-LDHFFCEVPALIKLACVDTTFN 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15947 172 ELELFVASVFFLLVPLSLILVSYGFIARAVLRIKSAEGRRKAFGTCSSHLLVVSLFYGTAIYMYLQPPSSYSQDQGKFIS 251
                       250
                ....*....|....*....
gi 22128953 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd15947 252 LFYTVVTPTLNPLIYTLRN 270
7tmA_OR5AP2-like cd15943
olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of ...
15-307 3.85e-107

olfactory receptor subfamily 5AP2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AP2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320609 [Multi-domain]  Cd Length: 295  Bit Score: 313.92  E-value: 3.85e-107
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  15 EFVFRVFTTVPEFQALLFLLFLLLYLMILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQK 94
Cdd:cd15943   1 EFILLGLTDNPELQVILFAVFLVIYLITLVGNLGMIVLIRLDSRLHTPMYFFLSHLSFLDLCYSSAITPKMLVNFLAENK 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  95 PISLAGCGTQMFFFVTLGSTDCFLLAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCG 174
Cdd:cd15943  81 TISFTGCAAQMYFFVAFATTECFLLAVMAYDRYVAICNPLLYTVIMSPRVCIQLVAGSYLIGFVNALIQTICTFRLPFCG 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 175 HDQeINHFLCDVPPVLRLACADIHVHQAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVL 254
Cdd:cd15943 161 SNV-INHFFCDVPPLLKLSCSDTHVNEIVLFAFAIFLGIFTSLEILVSYVYILSAILRIHSSEGRRKAFSTCASHLMAVT 239
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|...
gi 22128953 255 LQYGCCSLVYLRPRSSTSEDEDRQIALVYTFVTPLLNPLIYTLRNKDVKGALK 307
Cdd:cd15943 240 IFYGTTLFMYLRPSSSYSLDQDKVVSVFYTVVIPMLNPLIYSLRNKEVKDALR 292
7tmA_OR8H-like cd15411
olfactory receptor subfamily 8H and related proteins, member of the class A family of ...
43-308 1.27e-106

olfactory receptor subfamily 8H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8H, 8I, 5F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320533 [Multi-domain]  Cd Length: 279  Bit Score: 311.94  E-value: 1.27e-106
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15411  15 VMGNLGMILLIRADSQLHTPMYFFLSNLSFVDFCYSSTITPKALENFLSGRKAISFAGCFVQMYFFIALATTECFLLGLM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCgHDQEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15411  95 AYDRYVAICNPLLYTVVMSRRVCLKLAAGSYAAGFLNSLIHTTLISRLSFC-GSNVINHFFCDTPPLLKLSCSDTHVNEM 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 203 VLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALV 282
Cdd:cd15411 174 LIFILAGLTLVGSLLIILVSYTYILSTILKIRSAEGRRKAFSTCASHLTAVTIFYGTGIFTYLRPSSSYSLGQDKVASVF 253
                       250       260
                ....*....|....*....|....*.
gi 22128953 283 YTFVTPLLNPLIYTLRNKDVKGALKN 308
Cdd:cd15411 254 YTVVIPMLNPLIYSLRNKEVKNALRR 279
7tmA_OR5A1-like cd15417
olfactory receptor subfamily 5A1 and related proteins, member of the class A family of ...
41-307 1.72e-106

olfactory receptor subfamily 5A1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5A1, 5A2, 5AN1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320539  Cd Length: 279  Bit Score: 311.88  E-value: 1.72e-106
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15417  13 VTLLWNLGLIILIRMDSHLHTPMYFFLSNLSFVDICYSSSITPKMLSDFFREQKTISFVGCATQYFVFSGMGLTECFLLA 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQeINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15417  93 AMAYDRYVAICNPLLYSVIMSPRLCVQLVAGAYLGGFLNSLIQTVSMFQLSFCGPNV-IDHFFCDIPPLLSLSCSDTFIS 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15417 172 QVVLFLVAVLFGVFSVLVVLISYGYIISTILKIRSAKGRSKAFNTCASHLTAVTLFYGTGLFVYLRPSSSHSQDQDKVAS 251
                       250       260
                ....*....|....*....|....*..
gi 22128953 281 LVYTFVTPLLNPLIYTLRNKDVKGALK 307
Cdd:cd15417 252 VFYTVVIPMLNPLIYSLRNKEIKDALK 278
7tmA_OR5AK3-like cd15408
olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of ...
16-303 2.69e-106

olfactory receptor subfamily 5AK3, 5AU1, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AK3, 5AU1, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320530  Cd Length: 287  Bit Score: 311.56  E-value: 2.69e-106
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  16 FVFRVFTTVPEFQALLFLLFLLLYLMILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKP 95
Cdd:cd15408   1 FILLGFTDQPELQVLLFVVFLLIYVITLVGNLGMILLIRLDSRLHTPMYFFLSHLSFLDICYSSTITPKTLLNLLAERKV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  96 ISLAGCGTQMFFFVTLGSTDCFLLAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGH 175
Cdd:cd15408  81 ISFTGCLTQLYFYAVFATTECYLLAAMAYDRYVAICNPLLYTVIMSQRVCVSLVAGSYLAGFLNSTVHTGFILRLSFCGS 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 176 DQeINHFLCDVPPVLRLACADIHVHQAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLL 255
Cdd:cd15408 161 NV-INHFFCDGPPLLALSCSDTSLNEMLLFAFVGFNVLTTTLVILISYTYILATILRMRSAEGRHKAFSTCASHLTAVTL 239
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*...
gi 22128953 256 QYGCCSLVYLRPRSSTSEDEDRQIALVYTFVTPLLNPLIYTLRNKDVK 303
Cdd:cd15408 240 FYGSLAFMYLRPSSRYSLDLDKVASVFYTVVIPMLNPLIYSLRNKEVK 287
7tmA_OR9K2-like cd15419
olfactory receptor subfamily 9K2 and related proteins, member of the class A family of ...
41-307 2.00e-105

olfactory receptor subfamily 9K2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 9K2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320541  Cd Length: 279  Bit Score: 308.85  E-value: 2.00e-105
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15419  13 VTVLGNIGMIIIISTDSRLHTPMYFFLMNLSFLDLCYSSVIAPKALANFLSESKTISYNGCAAQFFFFSLFGTTEGFLLA 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGhDQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15419  93 AMAYDRFIAICNPLLYPVIMSRRVCVQLVAGSYLCGCINSIIQTSFTFSLSFCG-SNEIDHFFCDVPPLLKLSCSDTFIN 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15419 172 ELVMFVLCGLIIVSTILVILVSYAYILSTILRIPSAEGRKKAFSTCASHLTAVSLFYGTVFFMYAQPGAVSSPEQSKVVS 251
                       250       260
                ....*....|....*....|....*..
gi 22128953 281 LVYTFVTPLLNPLIYTLRNKDVKGALK 307
Cdd:cd15419 252 VFYTLVIPMLNPLIYSLRNKDVKEALK 278
7tmA_OR2W-like cd15434
olfactory receptor subfamily 2W and related proteins, member of the class A family of ...
41-306 2.07e-105

olfactory receptor subfamily 2W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2W and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320551 [Multi-domain]  Cd Length: 277  Bit Score: 308.92  E-value: 2.07e-105
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15434  13 LTLVGNTTIILVSCLDSRLHTPMYFFLANLSFLDLCFTTSIIPQMLVNLWGPDKTISYVGCAIQLFIALGLGGTECVLLA 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHdQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15434  93 VMAYDRYAAVCQPLHYTVVMHPRLCWKLVAMSWLIGFGNSLVLSPLTLSLPRCGH-HRVDHFFCEMPALIKLACVDTTAY 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15434 172 EATIFALGVFILLFPLSLILVSYGYIARAVLKIKSAAGRKKAFGTCGSHLTVVSLFYGTIIYMYLQPKNSVSQDQGKFLT 251
                       250       260
                ....*....|....*....|....*.
gi 22128953 281 LVYTFVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15434 252 LFYTIVTPSLNPLIYTLRNKDVKGAL 277
7tmA_OR5D-like cd15410
olfactory receptor subfamily 5D and related proteins, member of the class A family of ...
16-310 6.90e-105

olfactory receptor subfamily 5D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5D, 5L, 5W, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320532  Cd Length: 294  Bit Score: 308.05  E-value: 6.90e-105
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  16 FVFRVFTTVPEFQALLFLLFLLLYLMILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKP 95
Cdd:cd15410   1 FILLGFTDYPELQVPLFLVFLAIYGITLLGNLGMIVLIKIDPKLHTPMYFFLSHLSFVDFCYSSVIAPKMLVNFLAEDKA 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  96 ISLAGCGTQMFFFVTLGSTDCFLLAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGH 175
Cdd:cd15410  81 ISYSGCMLQFFFFCTFVVTESFLLAVMAYDRYVAICNPLLYTVIMSRKLCVLLVAGSYLWGIVCSLIHTCGLLRLSFCGS 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 176 DqEINHFLCDVPPVLRLACADIHVHQAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLL 255
Cdd:cd15410 161 N-VINHFFCDLPPLLSLSCSDTYLNELLLFIFGSLNEASTLLIILTSYVFIIVTILRIRSAEGRQKAFSTCASHLTAITI 239
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*
gi 22128953 256 QYGCCSLVYLRPRSSTSEDEDRQIALVYTFVTPLLNPLIYTLRNKDVKGALKNSI 310
Cdd:cd15410 240 FHGTILFMYCRPSSSYSLDTDKVASVFYTVVIPMLNPLIYSLRNKDVKDALRKLI 294
7tmA_OR2F-like cd15429
olfactory receptor subfamily 2F and related proteins, member of the class A family of ...
41-306 1.72e-104

olfactory receptor subfamily 2F and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2F and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320546 [Multi-domain]  Cd Length: 277  Bit Score: 306.64  E-value: 1.72e-104
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15429  13 LTLLGNFLIILLIRLDPRLHTPMYFFLSHLSFLDICYTTSVVPQMLAHFLAEHKTISFASCVAQLFISLALGGTEFILLA 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQeINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15429  93 VMAYDRYVAVCHPLRYTVIMSGGLCIQLAAASWTSGFLNSLVQTAFTFRLPFCGHNT-INHFSCELLAVVRLACVDTSLN 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15429 172 EVAILVSSVVVLLTPCFLVLLSYIHIISAILRIRSSEGRHKAFSTCASHLTVVSLCYGTAIFTYMRPRSGSSALQEKMIS 251
                       250       260
                ....*....|....*....|....*.
gi 22128953 281 LVYTFVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15429 252 LFYAVVTPMLNPLIYSLRNKEVKGAL 277
7tmA_OR13-like cd15430
olfactory receptor family 13 and related proteins, member of the class A family of ...
41-299 2.55e-103

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13C, 13D, 13F, and 13J), some subfamilies from OR family 2 (2K and 2S), and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320547 [Multi-domain]  Cd Length: 270  Bit Score: 303.52  E-value: 2.55e-103
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15430  13 VILLGNGVLIIITILDSHLHTPMYFFLGNLSFLDICYTSSSVPLMLVNFLSERKTISFSGCAVQMYLSLAMGSTECVLLA 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQeINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15430  93 VMAYDRYVAICNPLRYPIIMNKRLCVQMAAGSWVTGFLNSLVETVLAMQLPFCGNNV-INHFTCEILAVLKLACVDISLN 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15430 172 EIIMLVGNIIFLVIPLLLICISYIFILSTILRINSAEGRKKAFSTCSAHLTVVIIFYGTILFMYMKPKSKNAQISDKLIT 251
                       250
                ....*....|....*....
gi 22128953 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd15430 252 LFYGVVTPMLNPIIYSLRN 270
7tmA_OR2_unk cd15424
olfactory receptor family 2, unknown subfamily, member of the class A family of ...
43-306 6.71e-102

olfactory receptor family 2, unknown subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents an unknown subfamily, conserved in some mammalia and sauropsids, in family 2 of olfactory receptors. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320544 [Multi-domain]  Cd Length: 277  Bit Score: 300.11  E-value: 6.71e-102
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15424  15 ILGNLVIIILVQTDSRLHTPMYFFLSHLAGLEICYVTSTLPQMLAHLLAGNGAISFARCTTQMYIALSLGSTECLLLGAM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQeINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15424  95 AYDRYLAICHPLLYAAAMGRWRQLQLALSCWAIGFLLSVINVGCTLRHPFCGPNH-INHFFCELPVVLKLACADTHITEA 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 203 VLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALV 282
Cdd:cd15424 174 IVFGAGVLILLVPLSVILTSYGLILASVLQMQSAAGRHKAFSTCASHLAVVTLFYGTVISMYMRPRSGSTPDRDKQIAVF 253
                       250       260
                ....*....|....*....|....
gi 22128953 283 YTFVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15424 254 YIVITPLLNPIIYTLRNKDVHGAA 277
7tmA_OR14-like cd15227
olfactory receptor family 14 and related proteins, member of the class A family of ...
41-299 4.96e-101

olfactory receptor family 14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 14 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320355  Cd Length: 270  Bit Score: 297.44  E-value: 4.96e-101
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15227  13 AALTGNLLIITVVTLDHHLHTPMYFFLKNLSFLDLCYISVTVPKSIANSLTNTRSISFLGCVAQVFLFIFFAASELALLT 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGhDQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15227  93 VMAYDRYVAICHPLHYEVIMNRGACVQMAAASWLSGLLYGALHTANTFSLPFCG-SNVIHQFFCDIPQLLKLSCSDTYLN 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15227 172 EIGVLVLSVCLGLGCFVFIIVSYVHIFSTVLRIPSAQGRSKAFSTCLPHLIVVSLFLSTGSFAYLKPPSDSPSLLDLLLS 251
                       250
                ....*....|....*....
gi 22128953 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd15227 252 VFYSVVPPTLNPIIYSLRN 270
7tmA_OR13-like cd15232
olfactory receptor family 13 and related proteins, member of the class A family of ...
41-299 2.26e-100

olfactory receptor family 13 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 13 (subfamilies 13A1 and 13G1) and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320360 [Multi-domain]  Cd Length: 270  Bit Score: 295.71  E-value: 2.26e-100
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15232  13 AALTGNSLIILAISTSPKLHTPMYFFLVNLSLVDIICTSTVVPKLLQNLLTERKTISFGGCMAQLYFFTWSLGSELLLLT 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQeINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15232  93 AMAYDRYVAICHPLHYSTIMRKEVCVGLATGVWAIGMLNSAVHTGLMLRLSFCGPNI-INHFFCEIPPLLLLSCSDTSLN 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15232 172 EIMAFVADVFFGVGNFLLTLTSYGFIIRSILRIRSTEGKKKAFSTCSSHLIVVSLYYSTVIYTYIRPSSSYSPEKDKVVA 251
                       250
                ....*....|....*....
gi 22128953 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd15232 252 VLYSVVTPTLNPLIYSLRN 270
7tmA_OR5H-like cd15409
olfactory receptor subfamily 5H and related proteins, member of the class A family of ...
43-307 3.45e-99

olfactory receptor subfamily 5H and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5H, 5K, 5AC, 5T and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320531 [Multi-domain]  Cd Length: 279  Bit Score: 293.16  E-value: 3.45e-99
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15409  15 LVGNLGLIALIWKDSHLHTPMYFFLGNLAFADACTSSSVTPKMLVNFLSKNKMISFSGCAAQFFFFGFSATTECFLLAAM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDqEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15409  95 AYDRYVAICNPLLYPVVMSNRLCVQLITASYIGGFLHSMIHVGLTFRLSFCGSN-EINHFFCDIPPLLKISCTDPSINEL 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 203 VLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALV 282
Cdd:cd15409 174 VLFIFSGSIQVFTILTVLISYSYILFTILKMKSAEGRRKAFSTCGSHLLSVSLFYGSLFFMYVRPSSLYALDQDMMDSLF 253
                       250       260
                ....*....|....*....|....*
gi 22128953 283 YTFVTPLLNPLIYTLRNKDVKGALK 307
Cdd:cd15409 254 YTIVIPLLNPFIYSLRNKEVIDALR 278
7tmA_OR6B-like cd15224
olfactory receptor subfamily 6B and related proteins, member of the class A family of ...
46-299 1.63e-98

olfactory receptor subfamily 6B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6B, 6A, 6Y, 6P, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320352  Cd Length: 270  Bit Score: 291.11  E-value: 1.63e-98
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  46 NAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMAYD 125
Cdd:cd15224  18 NLLIILTIWLNSQLHKPMYFFLSNLSFLEIWYISVTVPKLLAGFLSQNKSISFVGCMTQLYFFLSLACTECVLLAVMAYD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 126 RYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQeINHFLCDVPPVLRLACADIHVHQAVLY 205
Cdd:cd15224  98 RYVAICHPLRYPVIMTHQLCVQLAAGSWLSGFLISMIKVYFISQLSFCGPNV-INHFFCDISPLLNLSCTDMSLAELVDF 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 206 VVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALVYTF 285
Cdd:cd15224 177 ILALIILLVPLLVTVASYICIISTVLRIPSATGRQKAFSTCASHLTVVIIFYSATLFMYARPKAISSFDSNKLVSVLYTV 256
                       250
                ....*....|....
gi 22128953 286 VTPLLNPLIYTLRN 299
Cdd:cd15224 257 VTPLLNPIIYCLRN 270
7tmA_OR6N-like cd15914
olfactory receptor OR6N and related proteins, member of the class A family of ...
41-299 4.36e-98

olfactory receptor OR6N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 6N, 6K, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320580 [Multi-domain]  Cd Length: 270  Bit Score: 290.04  E-value: 4.36e-98
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15914  13 FIITGNLLIFTVVRLDTHLHTPMYFFISILSFLEIWYTTVTIPKMLSNLLSEEKTISFNGCLLQMYFFHSLGITECYLLT 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQeINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15914  93 AMAYDRYLAICNPLHYPSIMTPKLCTQLAAGCWLCGFLGPVPEIILISTLPFCGPNQ-IQHIFCDFPPLLSLACTDTSLN 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15914 172 VLVDFVIHAVIILLTFLLILLSYVKIISVVLKIPSAEGRQKAFSTCAAHLTVVLLFFGSVSFMYLRLSKSYSLDYDRAIA 251
                       250
                ....*....|....*....
gi 22128953 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd15914 252 VVYAVLTPFFNPIIYSLRN 270
7tmA_OR5M-like cd15412
olfactory receptor subfamily 5M and related proteins, member of the class A family of ...
43-308 1.59e-97

olfactory receptor subfamily 5M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5M and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320534  Cd Length: 279  Bit Score: 288.91  E-value: 1.59e-97
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15412  15 LLGNLGMILLIRLDSRLHTPMYFFLSHLSFVDLCYSSNVTPKMLVNFLSEKKTISFAGCFTQCYFFIALVITEYYMLAVM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDqEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15412  95 AYDRYMAICNPLLYSVKMSRRVCISLVTFPYIYGFLNGLIQTILTFRLSFCGSN-VINHFYCADPPLIKLSCSDTYVKET 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 203 VLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALV 282
Cdd:cd15412 174 AMFIVAGFNLSSSLLIILISYLFILIAILRIRSAEGRCKAFSTCGSHLTAVTIFYGTLFCMYLRPPSEESVEQSKIVAVF 253
                       250       260
                ....*....|....*....|....*.
gi 22128953 283 YTFVTPLLNPLIYTLRNKDVKGALKN 308
Cdd:cd15412 254 YTFVSPMLNPLIYSLRNKDVKQALKK 279
7tmA_OR5P-like cd15416
olfactory receptor subfamily 5P and related proteins, member of the class A family of ...
42-307 4.07e-97

olfactory receptor subfamily 5P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5P and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320538 [Multi-domain]  Cd Length: 279  Bit Score: 287.73  E-value: 4.07e-97
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  42 ILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAV 121
Cdd:cd15416  14 TLLGNLSIILLIRISSQLHTPMYFFLSHLAFSDICYSSSVTPKMLVNFLVEKTTISYPGCAAQLCSAATFGTVECFLLAA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 122 MAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDqEINHFLCDVPPVLRLACADIHVHQ 201
Cdd:cd15416  94 MAYDRYVAICNPLLYSTIMSQKVCVLLVAASYLGGCLNALVFTTCVFSLSFCGPN-EINHFFCDFPPLLKLSCSDIRLAK 172
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 202 AVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIAL 281
Cdd:cd15416 173 ILPSISSGIIILVTVLTIIISYLYILIAILRIRSTEGRHKAFSTCASHLTAVTLFYGTITFIYVMPNSSYSMDQNKVVSV 252
                       250       260
                ....*....|....*....|....*.
gi 22128953 282 VYTFVTPLLNPLIYTLRNKDVKGALK 307
Cdd:cd15416 253 FYMVVIPMLNPLIYSLRNKEVKGALK 278
7tmA_OR2B2-like cd15432
olfactory receptor subfamily 2B2 and related proteins, member of the class A family of ...
41-306 2.59e-96

olfactory receptor subfamily 2B2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes transmembrane olfactory receptor subfamily 2B2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320549 [Multi-domain]  Cd Length: 277  Bit Score: 285.91  E-value: 2.59e-96
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15432  13 LTLLGNLAIILVSRLDPQLHTPMYFFLSNLSLLDLCYTTSTVPQMLVNLRSPQKTISYGGCVAQLFIFLGLGSTECVLLA 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHdQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15432  93 VMAFDRFAAICQPLHYSVIMHQRLCQQLAAGAWISGFANSLVQSTLTLKMPRCGR-RRVDHFFCEVPALLKLSCVDTTAN 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15432 172 EAELFVISVLLLLIPLGLILISYIFIVRAVLRIRSAEGRRKAFNTCGSHLLVVSLFYGTAISMYLQPPSNSSHDRGKMVA 251
                       250       260
                ....*....|....*....|....*.
gi 22128953 281 LVYTFVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15432 252 LFYGIITPMLNPLIYTLRNKDVKEAL 277
7tmA_OR12D-like cd15915
olfactory receptor subfamily 12D and related proteins, member of the class A family of ...
41-299 5.23e-96

olfactory receptor subfamily 12D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 12D and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320581 [Multi-domain]  Cd Length: 271  Bit Score: 284.97  E-value: 5.23e-96
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15915  13 ASLLGNGAILAVVIAEPRLHSPMYFFLGNLSCLDIFYSSVTVPKMLAGLLSEHKTISFQGCISQLHFFHFLGSSEAMLLA 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQeINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15915  93 VMAYDRYVAICNPLRYTVIMNPQVCLLLAVACWVTGFFHALMHTVMTSRLPFCGPNK-INHFFCDIKPLLKLACGDTSLN 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRM-RSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQI 279
Cdd:cd15915 172 LWLLNIVTGSIALGTFILTLLSYIYIISFLLLKvRSKEGRHKAFSTCASHLTVVLLLYGPALFTYIRPSSGDSLEQDRIV 251
                       250       260
                ....*....|....*....|
gi 22128953 280 ALVYTFVTPLLNPLIYTLRN 299
Cdd:cd15915 252 ALLYTVVTPVLNPLIYTLRN 271
7tmA_OR5G-like cd15414
olfactory receptor subfamily 5G and related proteins, member of the class A family of ...
41-313 2.02e-93

olfactory receptor subfamily 5G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320536 [Multi-domain]  Cd Length: 285  Bit Score: 278.93  E-value: 2.02e-93
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15414  13 ITLLGNLGMIILIQVDSRLHTPMYFFLSHLSFVDLCYSSVVTPKMLSDFFVEKKAISFLGCAAQMWFFGLFVAAECFLLA 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQeINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15414  93 SMAYDRYVAICNPLLYTVIMSQRVCVQLVVGPYVVGLLNTTTHTTAAFFLPFCGPNV-INHFFCDIPPLLSLSCADTQIN 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15414 172 KWVLFIMAGALGVLSGLIILVSYIYILIAILRIRSAEGRRKAFSTCSSHLTAVSILYGTLFFIYVRPSSSSSLDLDKVVS 251
                       250       260       270
                ....*....|....*....|....*....|...
gi 22128953 281 LVYTFVTPLLNPLIYTLRNKDVKGALKNSIFHK 313
Cdd:cd15414 252 VFYTAVIPMLNPLIYSLRNKEVKDALRRTIRRK 284
7tmA_OR5J-like cd15415
olfactory receptor subfamily 5J and related proteins, member of the class A family of ...
43-307 4.44e-92

olfactory receptor subfamily 5J and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5J and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320537 [Multi-domain]  Cd Length: 279  Bit Score: 275.06  E-value: 4.44e-92
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15415  15 LLGNLGMIVLIRINPQLHTPMYFFLSNLSFVDLCYSSVFAPRLLVNFLVEKKTISYSACIAQHFFFAVFVTTEGFLLAVM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQeINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15415  95 AYDRYVAICNPLLYTVAMTKRVCVQLVAGSYLGGLINSLTHTIGLLKLSFCGPNV-INHYFCDIPPLLKLSCSDTHINEL 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 203 VLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALV 282
Cdd:cd15415 174 LLLTFSGVIAMSTLLTIIISYIFILFAILRIRSAEGRRKAFSTCASHLTAVTLFYGSVSFSYIQPSSQYSLEQEKVSAVF 253
                       250       260
                ....*....|....*....|....*
gi 22128953 283 YTFVTPLLNPLIYTLRNKDVKGALK 307
Cdd:cd15415 254 YTLVIPMLNPLIYSLRNKDVKDALK 278
7tmA_OR5AR1-like cd15944
olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of ...
16-310 5.01e-92

olfactory receptor subfamily 5AR1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5AR1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320610 [Multi-domain]  Cd Length: 294  Bit Score: 275.51  E-value: 5.01e-92
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  16 FVFRVFTTVPEFQALLFLLFLLLYLMILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKP 95
Cdd:cd15944   1 FILLGFTQDPQMQIILFVVFLIIYLVNVVGNLGMIILITTDSQLHTPMYFFLCNLSFCDLGYSSAIAPRMLADFLTKHKV 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  96 ISLAGCGTQMFFFVTLGSTDCFLLAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGh 175
Cdd:cd15944  81 ISFSGCATQFAFFVGFVDAECYVLAAMAYDRYVAICNPLLYSTLMSKRVCLQLMAGSYLAGLVNLVIHTTATFSLSFCG- 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 176 DQEINHFLCDVPPVLRLACADIHVHQAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLL 255
Cdd:cd15944 160 SNIINHFFCDVPPLLALSCSDTHINEILLYVFCGFVEMSSLSIILISYLFILVAILRMRSAEGRRKAFSTCASHFTGVTL 239
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|....*
gi 22128953 256 QYGCCSLVYLRPRSSTSEDEDRQIALVYTFVTPLLNPLIYTLRNKDVKGALKNSI 310
Cdd:cd15944 240 FYGTVIFMYLRPTSVYSLDQDKWASVFYTVVIPMLNPLIYSLRNKDVKEAFKKLI 294
7tmA_OR5C1-like cd15945
olfactory receptor subfamily 5C1 and related proteins, member of the class A family of ...
16-307 5.74e-92

olfactory receptor subfamily 5C1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5C1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320611  Cd Length: 292  Bit Score: 275.47  E-value: 5.74e-92
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  16 FVFRVFTTVPEFQALLFLLFLLLYLMILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKP 95
Cdd:cd15945   1 FILLGFTDYLSLKVTLFLVFLLVYLLTLVGNVGMIILIRMDSQLHTPMYYFLSNLSFLDLCYSTAIGPKMLVDLLAKRKS 80
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  96 ISLAGCGTQMFFFVTLGSTDCFLLAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGH 175
Cdd:cd15945  81 IPFYGCALQMFFFAAFADAECLLLAVMAYDRYVAICNPLLYTTAMSRRVCYLLLVGAYLSGMATSLVHTTLTFRLSFCGS 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 176 DqEINHFLCDVPPVLRLACADIHVHQAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLL 255
Cdd:cd15945 161 N-TINHFFCDIPPLLALSCSDTQINELLLFALCGFIQTSTFLAIIISYCYIIITVLKIRSAEGRFKAFSTCASHLTAVGL 239
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|..
gi 22128953 256 QYGCCSLVYLRPRSSTSEDEDRQIALVYTFVTPLLNPLIYTLRNKDVKGALK 307
Cdd:cd15945 240 FYGTLLFMYLRPSSSYSLDTDKMTSVFYTLVIPMLNPLIYSLRNKDVKEALK 291
7tmA_OR7-like cd15234
olfactory receptor family 7 and related proteins, member of the class A family of ...
45-306 1.62e-91

olfactory receptor family 7 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 7 and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320362 [Multi-domain]  Cd Length: 277  Bit Score: 273.68  E-value: 1.62e-91
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMAY 124
Cdd:cd15234  17 GNLLIILAVSSDSHLHTPMYFFLSNLSFADICFSSTTVPKMLVNIQTQSKSISYTGCLTQMCFFLLFGGLDNFLLAVMAY 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 125 DRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGhDQEINHFLCDVPPVLRLACADIHVHQAVL 204
Cdd:cd15234  97 DRYVAICHPLHYTVIMNPCLCGLLVLLSLLISILDSLLHSLMVLQLSFCT-DVEIPHFFCELAQVLKLACSDTLINNILI 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 205 YVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLrprSSTSEDEDRQIA---L 281
Cdd:cd15234 176 YLATVIFGGIPLSGIIFSYYKIVSSILRIPSSGGKYKAFSTCGSHLSVVSLFYGTGLGVYI---SSAVTHSSRKTAvasV 252
                       250       260
                ....*....|....*....|....*
gi 22128953 282 VYTFVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15234 253 MYTVVTPMLNPFIYSLRNKDMKGAL 277
7tmA_OR10D-like cd15228
olfactory receptor subfamily 10D and related proteins, member of the class A family of ...
43-306 1.65e-91

olfactory receptor subfamily 10D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320356 [Multi-domain]  Cd Length: 275  Bit Score: 273.54  E-value: 1.65e-91
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15228  15 LLGNLLILSAILSDPRLHTPMYFFLCNLSVFDIGFSSVSTPKMLAYLWGQSRVISLGGCMSQVFFYHFLGSTECLLYTVM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDqEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15228  95 AYDRYVAICHPLRYLLIMNRRVCALLAAGTWITSSFHATILTSLTFTLPYCGSN-VVDYFFCDIFPVLKLACADTSIAET 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 203 VLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIalV 282
Cdd:cd15228 174 VSFTNVGLVPLTCFLLILASYVRIVISILKMRSAEGRRKAFSTCSSHLTVVTLFFGPCALIYTQPTPSPVLVTPVQI--F 251
                       250       260
                ....*....|....*....|....
gi 22128953 283 YTFVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15228 252 NNVVTPMLNPLIYTLRNKEVKAAL 275
7tmA_OR5B-like cd15407
olfactory receptor subfamily 5B and related proteins, member of the class A family of ...
43-308 8.27e-91

olfactory receptor subfamily 5B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 5B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320529  Cd Length: 279  Bit Score: 271.99  E-value: 8.27e-91
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15407  15 LVGNLGMILLILLDSRLHTPMYFFLSNLSLVDIGYSSAVTPKVMAGLLTGDKVISYNACAAQMFFFVVFATVENFLLASM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCgHDQEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15407  95 AYDRHAAVCKPLHYTTTMTTKVCACLTIGCYVCGFLNASIHTGNTFRLSFC-KSNVINHFFCDIPPVLALSCSDIHISEI 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 203 VLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALV 282
Cdd:cd15407 174 VLFFLASFNVFFALLVILISYLFIFITILRMRSAEGHQKAFSTCASHLTAVSIFYGTVIFMYLQPSSSHSMDTDKMASVF 253
                       250       260
                ....*....|....*....|....*.
gi 22128953 283 YTFVTPLLNPLIYTLRNKDVKGALKN 308
Cdd:cd15407 254 YTMVIPMLNPLVYSLRNKEVKSAFKK 279
7tmA_OR8K-like cd15413
olfactory receptor subfamily 8K and related proteins, member of the class A family of ...
45-307 3.30e-90

olfactory receptor subfamily 8K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8K, 8U, 8J, 5R, 5AL and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320535  Cd Length: 279  Bit Score: 270.35  E-value: 3.30e-90
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMAY 124
Cdd:cd15413  17 GNLGMIILTRLDSRLQTPMYFFLRHLAFVDLGYSTAVTPKMLVNFVVEQNTISFYACATQLAFFLTFIISELFLLSAMAY 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 125 DRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQeINHFLCDVPPVLRLACADIHVHQAVL 204
Cdd:cd15413  97 DRYVAICNPLLYTVIMSQRVCIVLVAIPYLYSFFVALFHTIKTFRLSFCGSNV-INHFYCDDLPLLALSCSDTHEKELII 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 205 YVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALVYT 284
Cdd:cd15413 176 LIFAGFNLISSLLIVLVSYLFILSAILRIRSAEGRQKAFSTCGSHLTVVTIFYGTLIFMYLQPKSSHSLDTDKMASVFYT 255
                       250       260
                ....*....|....*....|...
gi 22128953 285 FVTPLLNPLIYTLRNKDVKGALK 307
Cdd:cd15413 256 LVIPMLNPLIYSLRNKEVKDALK 278
7tmA_OR2D-like cd15428
olfactory receptor subfamily 2D and related proteins, member of the class A family of ...
41-306 6.63e-90

olfactory receptor subfamily 2D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320545 [Multi-domain]  Cd Length: 277  Bit Score: 269.35  E-value: 6.63e-90
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15428  13 MTVLGNLLLVLLVIVDSHLHTPMYFFLSNLSVLELCYTTTVVPQMLVHLLSERKIISFIRCAAQLYFFLSFGITECALLS 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQeINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15428  93 VMSYDRYVAICLPLRYSLIMTWKVCISLATGSWVGGLLVSAVDTAFTLNLSFGGHNK-INHFLCEMPALLKLASTDTHQA 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15428 172 EMAMFIMCVFTLVLPVLLILASYTRIIYTVFGMQSLTGRLKAFSTCSSHLMVVSLFYGSVLSTYMRPKSSTSKEYDKMIS 251
                       250       260
                ....*....|....*....|....*.
gi 22128953 281 LVYTFVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15428 252 VFYIIVTPMLNPLIYSLRNKEVKHAL 277
7tmA_OR1330-like cd15946
olfactory receptor 1330 and related proteins, member of the class A family of ...
42-299 1.18e-89

olfactory receptor 1330 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes olfactory receptors 1330 from mouse, Olr859 from rat, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320612  Cd Length: 270  Bit Score: 268.58  E-value: 1.18e-89
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  42 ILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAV 121
Cdd:cd15946  14 ILLGNGLIITLICLDSRLHTPMYFFLSVLSLLDMSYVTTTVPQMLVHLLSHKKTISFTGCVAQMYIFLALGITECTLFSV 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 122 MAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDqEINHFLCDVPPVLRLACADIHVHQ 201
Cdd:cd15946  94 MAYDRYVAICHPLRYKVIMSWGLCILMVAGSWVCGVFSSLLHTFFTMRLPYCGPN-EINHYFCEVPAVLKLACADTSLNE 172
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 202 AVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIAL 281
Cdd:cd15946 173 MVDFVLGVIVLVVPLSLILASYVNIFKAILKIRSTQGRCKAFSTCASHITVVTMFYGPAMFMYMRPGSNYSPERDKKISL 252
                       250
                ....*....|....*...
gi 22128953 282 VYTFVTPLLNPLIYTLRN 299
Cdd:cd15946 253 FYNVFTALLNPVIYSLRN 270
7tmA_OR9G-like cd15418
olfactory receptor subfamily 9G and related proteins, member of the class A family of ...
43-307 2.15e-89

olfactory receptor subfamily 9G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 9G and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320540 [Multi-domain]  Cd Length: 281  Bit Score: 268.19  E-value: 2.15e-89
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15418  16 LVGNLTLIALICLDSRLHTPMYFFVGNLSFLDLWYSSVYTPKILADCISKDKSISFAGCAAQFFFSAGLAYSECFLLAAM 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGhDQEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15418  96 AYDRYVAICNPLLYSSAMSKKLCMGLVAASYLGGFANAIIHTSNTFRLHFCG-DNIIDHFFCDLPPLVKLACDDTRVYEL 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 203 VLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALV 282
Cdd:cd15418 175 ILYFILGFNVIAPTALILASYTFILAAILRIHSASGRHKAFSTCSAHLTSVTLYYGSILFIYSRPSSSHTPDRDKVVALF 254
                       250       260
                ....*....|....*....|....*
gi 22128953 283 YTFVTPLLNPLIYTLRNKDVKGALK 307
Cdd:cd15418 255 YTVVNPLLNPLIYSLRNKDVKEALK 279
7tmA_OR8D-like cd15406
olfactory receptor subfamily 8D and related proteins, member of the class A family of ...
45-307 3.85e-87

olfactory receptor subfamily 8D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8D and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320528 [Multi-domain]  Cd Length: 290  Bit Score: 263.07  E-value: 3.85e-87
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMAY 124
Cdd:cd15406  26 GNLGMILLITLSSQLHTPMYYFLSNLSFIDLCYSSVITPKMLVNFVSEKNIISYPECMTQLFFFCVFAIAECYMLTAMAY 105
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 125 DRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDqEINHFLCDVPPVLRLACADIHVHQAVL 204
Cdd:cd15406 106 DRYVAICNPLLYNVTMSPRVCSLLVAGVYIMGLIGATVHTSCMLRLSFCGDN-VINHYFCDILPLLKLSCSSTYINELLL 184
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 205 YVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALVYT 284
Cdd:cd15406 185 FIVGGFNVLATTLAILISYAFILSSILRIRSAEGRSKAFSTCSSHLAAVGVFYGSIIFMYLKPSSSSSMTQEKVSSVFYT 264
                       250       260
                ....*....|....*....|...
gi 22128953 285 FVTPLLNPLIYTLRNKDVKGALK 307
Cdd:cd15406 265 TVIPMLNPLIYSLRNKDVKNALK 287
7tmA_OR4A-like cd15939
olfactory receptor 4A and related proteins, member of the class A family of ...
42-299 8.09e-87

olfactory receptor 4A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4A, 4C, 4P, 4S, 4X and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320605 [Multi-domain]  Cd Length: 267  Bit Score: 261.38  E-value: 8.09e-87
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  42 ILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAV 121
Cdd:cd15939  14 TVLGNLLIVVTIKASQTLGSPMYFFLSYLSFIDICYSSTTAPKLIVDLLSERKTISFNGCMTQLFAEHFFGGAEIFLLTV 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 122 MAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGhDQEINHFLCDVPPVLRLACADIHvhq 201
Cdd:cd15939  94 MAYDRYVAICKPLHYTTIMNRRVCGLLVGVAWVGGFLHSTIQILLTLQLPFCG-PNVIDHFFCDLFPLLKLACTDTY--- 169
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 202 avlyVVGILVL-------TVPFLLICISYVFIASTiLRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPrsSTSED 274
Cdd:cd15939 170 ----VIGLLVVansglicLLSFLILLISYIVILYS-LRTHSSEGRRKALSTCGSHITVVVLFFVPCIFIYMRP--VTTFP 242
                       250       260
                ....*....|....*....|....*
gi 22128953 275 EDRQIALVYTFVTPLLNPLIYTLRN 299
Cdd:cd15939 243 IDKVVAVFYTIITPMLNPLIYTLRN 267
7tmA_OR11G-like cd15913
olfactory receptor OR11G and related proteins, member of the class A family of ...
43-299 2.03e-85

olfactory receptor OR11G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 11G, 11H, and related proteins in other mammals, and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320579  Cd Length: 270  Bit Score: 257.63  E-value: 2.03e-85
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15913  15 LLGNGAIICAVWWDRRLHTPMYILLGNFSFLEICYVTSTVPNMLVNFLSETKTISFSGCFLQFYFFFSLGTTECFFLSVM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQeINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15913  95 AFDRYLAICRPLHYPTIMTGQLCGKLVAFCWVCGFLWFLIPVVLISQLPFCGPNI-IDHFLCDPGPLLALSCVPAPGTEL 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 203 VLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALV 282
Cdd:cd15913 174 ICYTLSSLIIFGTFLFILGSYTLVLRAVLRVPSAAGRHKAFSTCGSHLAVVSLFYGSVMVMYVSPGSGNSTGMQKIVTLF 253
                       250
                ....*....|....*..
gi 22128953 283 YTFVTPLLNPLIYTLRN 299
Cdd:cd15913 254 YSVVTPLLNPLIYSLRN 270
7tmA_OR10G-like cd15916
olfactory receptor subfamily 10G and related proteins, member of the class A family of ...
45-306 2.01e-83

olfactory receptor subfamily 10G and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 10G, 10S, and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320582 [Multi-domain]  Cd Length: 276  Bit Score: 253.14  E-value: 2.01e-83
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQ-KPISLAGCGTQMFFFVTLGSTDCFLLAVMA 123
Cdd:cd15916  17 GNLLILLTVWVDSHLHRPMYIFLGHLSFLDMWLSTVTVPKMLAGFLEPGgKVISFGGCVAQLYFFHFLGSTECFLYTLMA 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 124 YDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQeINHFLCDVPPVLRLACADIHVHQAV 203
Cdd:cd15916  97 YDRYLAICHPLHYPTIMTGRLCTRLATGTWVAGSLHSAIHTSLTFRLPFCGPNR-IDYFFCDIPPLLKLACADTTINELV 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 204 LYV-VGILVLTVpFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSedEDRQIALV 282
Cdd:cd15916 176 IFAsIGVVALGC-FILILLSYGNIVRAILRIRTAEGRRRAFSTCASHLIVVLCFYVPCVFIYLRPGSKEA--LDGVIAVF 252
                       250       260
                ....*....|....*....|....
gi 22128953 283 YTFVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15916 253 YTVVTPLLNPLIYTLRNKEVKTAL 276
7tmA_OR1E-like cd15236
olfactory receptor subfamily 1E and related proteins, member of the class A family of ...
45-306 3.14e-83

olfactory receptor subfamily 1E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 1E, 1J, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320364 [Multi-domain]  Cd Length: 277  Bit Score: 252.38  E-value: 3.14e-83
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMAY 124
Cdd:cd15236  17 GNLLIILLIRLDSHLHTPMYFFLSHLAFTDVSFSSVTVPKMLMNMQTQDQSIPYAGCISQMYFFIFFGCLDSFLLAVMAY 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 125 DRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGhDQEINHFLCDVPPVLRLACADIHVHQAVL 204
Cdd:cd15236  97 DRYVAICHPLHYTAIMRPELCVLLVAGSWVLTCFHALLHTLLLARLSFCA-DNVIPHFFCDLVALLKLSCSSTSLNELVI 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 205 YVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALVYT 284
Cdd:cd15236 176 FTEGGLLFVLPLLLILGSYIRIAATILKVPSTKGICKAFSTCGSHLSVVFLYYGTIIGVYFFPSSNNSSDKDIVASVMYT 255
                       250       260
                ....*....|....*....|..
gi 22128953 285 FVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15236 256 VVTPMLNPFIYSLRNRDIKGAL 277
7tmA_OR3A-like cd15233
olfactory receptor subfamily 3A3 and related proteins, member of the class A family of ...
45-306 3.24e-81

olfactory receptor subfamily 3A3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 3A3 and 3A4, and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320361 [Multi-domain]  Cd Length: 277  Bit Score: 247.40  E-value: 3.24e-81
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMAY 124
Cdd:cd15233  17 GNLSILAAILLEPKLHTPMYFFLGNLSLLDIGCISVTVPQMLVHLLSHKRTISYAACLSQLFFFHLLAGADCFLLTAMAY 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 125 DRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGhDQEINHFLCDVPPVLRLACADIHVHQAVL 204
Cdd:cd15233  97 DRYLAICQPLTYSVRMSWRVQTALVGISCACAFTNALTHTVAMSTLKFCG-PNVINHFFCDLPPLFQLSCSSTHLNELLL 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 205 YVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALVYT 284
Cdd:cd15233 176 FVFAFFMALAPCVLIVVSYAHVVAAVLRIRSAEGRRKAFSTCGSHLTVVCIFYGTGVFSYMRLGSVYSSDKDKVIGILNT 255
                       250       260
                ....*....|....*....|..
gi 22128953 285 FVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15233 256 VLSPMLNPLIYSLRNKDVKGAL 277
7tmA_OR2Y-like cd15433
olfactory receptor subfamily 2Y and related proteins, member of the class A family of ...
41-306 3.57e-81

olfactory receptor subfamily 2Y and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 2Y, 2I, and related protein in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320550 [Multi-domain]  Cd Length: 277  Bit Score: 247.40  E-value: 3.57e-81
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15433  13 LTLVGNTIIILLSVRDLRLHTPMYYFLCHLSFVDLCFTTSTVPQLLANLRGPALTITRGGCVAQLFISLALGSAECVLLA 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHdQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15433  93 VMAFDRYAAVCRPLHYAALMSPRLCQTLASISWLSGFVNSVAQTGLLAERPLCGH-RLLDHFFCEMPVFLKLACGDDETT 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15433 172 EVQMFVARVVILLLPAALILGSYGHVAHAVLRIKSSAGRRRAFGTCGSHLMVVFLFYGSAIYTYLQPIHRYSQAHGKFVS 251
                       250       260
                ....*....|....*....|....*.
gi 22128953 281 LVYTFVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15433 252 LFYTVMTPALNPLIYTLRNKDVKGAL 277
7tmA_OR4-like cd15226
olfactory receptor family 4 and related proteins, member of the class A family of ...
42-299 1.81e-80

olfactory receptor family 4 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 4 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320354 [Multi-domain]  Cd Length: 267  Bit Score: 245.19  E-value: 1.81e-80
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  42 ILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAV 121
Cdd:cd15226  14 TVLGNLLIVVTVTSDPHLHSPMYFLLANLSFIDLCLSSFATPKMICDLLREHKTISFGGCMAQIFFLHFFGGSEMVLLIA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 122 MAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDqEINHFLCDVPPVLRLACADIhvhq 201
Cdd:cd15226  94 MAFDRYVAICKPLHYLTIMSPRMCILLVVASWIIGFIHSLSQLAFVVNLPFCGPN-VVDSFFCDLPLVIKLACTDT---- 168
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 202 avlYVVGILVLT-------VPFLLICISYVFIASTIlRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSed 274
Cdd:cd15226 169 ---YVLELMVVAnsglislVCFLLLLISYIVILVTV-RKHSSGGSSKALSTCSAHITVVVLFFGPCIFIYVWPFSTFP-- 242
                       250       260
                ....*....|....*....|....*
gi 22128953 275 EDRQIALVYTFVTPLLNPLIYTLRN 299
Cdd:cd15226 243 VDKFLAVFYTVITPLLNPIIYTLRN 267
7tmA_OR4E-like cd15940
olfactory receptor 4E and related proteins, member of the class A family of ...
41-299 6.11e-80

olfactory receptor 4E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4E and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320606 [Multi-domain]  Cd Length: 267  Bit Score: 243.89  E-value: 6.11e-80
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15940  13 LTLSGNILIMITIVMDPRLHTPMYFFLSNLSFIDICHSSVTVPKMLSDLLSEEKTISFNGCVTQLFFLHLFACTEIFLLT 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDqEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15940  93 IMAYDRYVAICNPLHYPTVMNHKVCLWLVAALWLGGTVHSLAQTFLTIRLPYCGPN-EIDSFFCDVPPVIKLACTDTYLI 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTiLRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPrsSTSEDEDRQIA 280
Cdd:cd15940 172 DILIVSNSGLISLVCFVALLGSYIVILVS-LRKRSTEGRRKALSTCASHLTVVTLFFGPCIFIYTRP--STSFSEDKVVS 248
                       250
                ....*....|....*....
gi 22128953 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd15940 249 VFYTVVTPLLNPIIYTLRN 267
7tmA_OR10S1-like cd15941
olfactory receptor subfamily 10S1 and related proteins, member of the class A family of ...
41-306 1.83e-78

olfactory receptor subfamily 10S1 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10S1 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320607 [Multi-domain]  Cd Length: 277  Bit Score: 240.52  E-value: 1.83e-78
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHT-PMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQ-KPISLAGCGTQMFFFVTLGSTDCFL 118
Cdd:cd15941  13 LTVLGNLLILLTIGSDPHLHGlPMYHFLGHLSFLDACLSSVTVPKVLAGLLTLSgRTISFEGCVVQLYAFHFLASTECFL 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 119 LAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQeINHFLCDVPPVLRLACADIH 198
Cdd:cd15941  93 YTVMAYDRYLAICHPLHYPTAMNRRMCAGLAGGTWATGATHAAIHTSLTFRLPYCGPCQ-IAYFFCDIPPVLKLACADTT 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 199 VHQAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSstSEDEDRQ 278
Cdd:cd15941 172 INELVILANIGIVAAGCFLLIVISYIYIVAAVLRIRTAEGRQRAFSTCSAHLTGVLLYYVPSVFIYLQPSS--SQAGAGA 249
                       250       260
                ....*....|....*....|....*...
gi 22128953 279 IALVYTFVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15941 250 PAVFYTIVTPMLNPFIYTLRNKEVKRAL 277
7tmA_OR4D-like cd15936
olfactory receptor 4D and related proteins, member of the class A family of ...
41-299 2.34e-76

olfactory receptor 4D and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4D and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320602 [Multi-domain]  Cd Length: 267  Bit Score: 234.54  E-value: 2.34e-76
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15936  13 TTWLGNLLIIITVISDPHLHTPMYFLLANLAFLDISFSSVTAPKMLSDLLSQTKTISFNGCMAQMFFFHFTGGAEVFLLS 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDqEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15936  93 VMAYDRYIAIHKPLHYLTIMNQGVCTGLVAGSWLGGFAHSIVQVALLLQLPFCGPN-VLDNFYCDVPQVIKLACTDTFLL 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTIlRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSedEDRQIA 280
Cdd:cd15936 172 ELLMVSNSGLVTLLIFFILLISYTVILVKI-RTHVTEGKRKALSTCASQITVVTLIFVPCIYIYARPFQTFP--MDKAVS 248
                       250
                ....*....|....*....
gi 22128953 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd15936 249 VLYTVITPMLNPMIYTLRN 267
7tmA_OR10G6-like cd15942
olfactory receptor subfamily 10G6 and related proteins, member of the class A family of ...
43-306 8.24e-76

olfactory receptor subfamily 10G6 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 10G6 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320608  Cd Length: 275  Bit Score: 233.48  E-value: 8.24e-76
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15942  15 LSGNSLIILVVISDLQLHKPMYWFLCHLSILDMAVSTVVVPKVIAGFLSGGRIISFGGCVTQLFFFHFLGCAECFLYTVM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDqEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15942  95 AYDRFLAICKPLHYSTIMNHRACLCLSLGTWLGGCLHSTFQTSLTFRLPYGQKN-EVDYIFCDIPAMLKLACADTAFNEL 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 203 VLYV-VGILVLTVpFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPrsSTSEDEDRQIAL 281
Cdd:cd15942 174 VTFIdIGLVAMTC-FLLILMSYVYIVSAILKIPSAEGQRRAFSTCTAHLTVVVIYYVPLTFIYLRP--GSQDPLDGVVAV 250
                       250       260
                ....*....|....*....|....*
gi 22128953 282 VYTFVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15942 251 FYTTVTPLLNPVIYTLRNKEMKDAL 275
7tmA_OR8B-like cd15405
olfactory receptor subfamily 8B and related proteins, member of the class A family of ...
45-306 1.32e-73

olfactory receptor subfamily 8B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 8B and related proteins in other mammals. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320527 [Multi-domain]  Cd Length: 277  Bit Score: 228.07  E-value: 1.32e-73
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMAY 124
Cdd:cd15405  17 GNLGLITLICLNSHLHTPMYFFLFNLSFIDLCYSSVFTPKMLMNFVSEKNTISYAGCMTQLFFFCFFVISECYVLTAMAY 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 125 DRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGhDQEINHFLCDVPPVLRLACADIHVHQAVL 204
Cdd:cd15405  97 DRYVAICNPLLYTVTMSPQVCSLLMLGSYVMGFAGAMAHTGCMLRLTFCD-SNIINHYMCDILPLLQLSCTSTYVNELVV 175
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 205 YVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIALVYT 284
Cdd:cd15405 176 FVVVGINIIVPSVTIFISYALILSNILHISSTEGRSKAFSTCSSHIIAVSLFFGSGAFMYLKPSSVGSVNQGKVSSVFYT 255
                       250       260
                ....*....|....*....|..
gi 22128953 285 FVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15405 256 NVVPMLNPLIYSLRNKDVKLAL 277
7tmA_OR4Q2-like cd15938
olfactory receptor 4Q2 and related proteins, member of the class A family of ...
41-299 1.05e-67

olfactory receptor 4Q2 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q2 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320604 [Multi-domain]  Cd Length: 265  Bit Score: 212.43  E-value: 1.05e-67
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15938  13 MVLVGNLLIMVTVRSDPKLSSPMYFLLGNLSFLDLCYSTVTCPKMLVDFLSQRKAISYEACIAQLFFLHFVGAAEMFLLT 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQeINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15938  93 VMAYDRYVAICKPLHYTTIMSRRLCWVLVAASWAGGFLHSIVQTLLTIQLPFCGPNQ-VNNFFCDVPPVIKLACTDTCVT 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIastILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSedEDRQIA 280
Cdd:cd15938 172 ELLMVSNSGLISTVCFVVLVTSYTTI---LVTIRSTEGRRKALSTCASHLMVVTLFFGPCIFIYARPFSTFP--VDKHVS 246
                       250
                ....*....|....*....
gi 22128953 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd15938 247 VLYNVITPMLNPLIYTLRN 265
7tmA_OR4N-like cd15937
olfactory receptor 4N, 4M, and related proteins, member of the class A family of ...
41-299 1.68e-62

olfactory receptor 4N, 4M, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 4N, 4M, and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320603  Cd Length: 267  Bit Score: 199.19  E-value: 1.68e-62
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15937  13 IILPGNILIILTIQGDPQLGSPMYFFLANLALLDICYSSITPPKMLADFFSERKTISYGGCMAQLFFLHFLGAAEMFLLV 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDqEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15937  93 AMAYDRYVAICKPLHYTTVVNRRVCCVLVGASWAGGFIHSIIQVALIIRLPFCGPN-VLDNFFCDITQVIKLACTNTYTV 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTiLRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSedEDRQIA 280
Cdd:cd15937 172 ELLMFSNSGLVILLCFLLLLISYAFLLAK-LRTHSSKGKSKAASTCITHIIIVFVMFGPAIYIYARPFRSFP--MDKVVA 248
                       250
                ....*....|....*....
gi 22128953 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd15937 249 VFHTVIFPLLNPMIYTLRN 267
7tmA_OR4Q3-like cd15935
olfactory receptor 4Q3 and related proteins, member of the class A family of ...
42-299 1.83e-61

olfactory receptor 4Q3 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor 4Q3 and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320601 [Multi-domain]  Cd Length: 268  Bit Score: 196.52  E-value: 1.83e-61
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  42 ILCGNAAIIWVVCTHSAL-HTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15935  14 ILLGNLLIVVTVHADPHLlQSPMYFFLANLSLIDMTLGSVAVPKVLADLLTCGRTISFGGCMAQLFFLHFLGGSEMLLLT 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDqEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15935  94 LMAYDRYVAICHPLRYLAVMNRQLCIKLLAACWAGGFLHSATQAALVLRLPFCGPN-ELDNFYCDVPQVIKLACMDTYVV 172
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTiLRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSedEDRQIA 280
Cdd:cd15935 173 EVLMVANSGLLSLVCFLVLLVSYGIILTT-LRGRFREGGGKALSTCSSHLTVVSLIFVPCIFVYLRPFSSSS--VDKVAS 249
                       250
                ....*....|....*....
gi 22128953 281 LVYTFVTPLLNPLIYTLRN 299
Cdd:cd15935 250 VFYTLITPALNPLIYTLRN 268
7tmA_OR56-like cd15223
olfactory receptor family 56 and related proteins, member of the class A family of ...
42-306 5.36e-58

olfactory receptor family 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 56 and related proteins in other mammals, sauropsids, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320351 [Multi-domain]  Cd Length: 279  Bit Score: 187.88  E-value: 5.36e-58
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  42 ILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAV 121
Cdd:cd15223  14 ALVANSLLLLIIKLERSLHQPMYILLGILAAVDIVLATTILPKMLAIFWFDANTISLPGCFAQMFFIHFFTAMESSILLV 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 122 MAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDqEINHFLCDVPPVLRLACADIHVHQ 201
Cdd:cd15223  94 MALDRYVAICKPLRYPSIITKSFILKLVLFALIRSGLLVLPIVVLASQLSYCSSN-VIEHCYCDHMALVSLACGDTTINS 172
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 202 AVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQY--GCCSLVYLRPRSSTSEDEDRQI 279
Cdd:cd15223 173 IYGLAVAWLIVGSDIILIFFSYALILRAVLRLASGEARSKALNTCGSHLIVILFFYtaVLVSSLTYRFGKTIPPDVHVLL 252
                       250       260
                ....*....|....*....|....*..
gi 22128953 280 ALVYTFVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15223 253 SVLYILIPPALNPIIYGVRTKEIRQGF 279
7tmA_OR51-like cd15222
olfactory receptor family 51 and related proteins, member of the class A family of ...
41-300 1.68e-51

olfactory receptor family 51 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor family 51 and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320350  Cd Length: 275  Bit Score: 171.14  E-value: 1.68e-51
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15222  13 VALLGNSTILFVIKTEPSLHEPMYYFLSMLAVTDLGLSLSTLPTVLGIFWFNAREISFDACLAQMFFIHTFSFMESSVLL 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCgHDQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15222  93 AMAFDRFVAICNPLRYASILTNSRIAKIGLAIVLRSVLLLLPLPFLLKRLPFC-HSNVLSHSYCLHQDVMKLACSDTRVN 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYG---CCSLVYlRPRSSTSEDEDR 277
Cdd:cd15222 172 SIYGLFVVLSTMGLDSLLILLSYVLILKTVLGIASREERLKALNTCVSHICAVLIFYVpmiGLSMVH-RFGKHASPLVHV 250
                       250       260
                ....*....|....*....|...
gi 22128953 278 QIALVYTFVTPLLNPLIYTLRNK 300
Cdd:cd15222 251 LMANVYLLVPPVLNPIIYSVKTK 273
7tmA_OR51_52-like cd15917
olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of ...
43-300 2.72e-51

olfactory receptor family 51, 52, 56 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor families 51, 52, 56, and related proteins in other mammals, sauropsids, amphibians, and fishes. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341351  Cd Length: 275  Bit Score: 170.55  E-value: 2.72e-51
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15917  15 LLGNITILFVIKIESSLHEPMYLFLAMLAATDLVLSTSTVPKMLGIFWFNAREISFDACLAQMFFIHSFTAMESGVLLAM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQeINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15917  95 AFDRYVAICYPLRYTTILTNTVVGKIGLAILLRAVALIIPLPLLVRRLPYCGSNV-ISHSYCEHMAVVKLACGDTRVNSI 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 203 VLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIAL- 281
Cdd:cd15917 174 YGLFVALLIVGFDLLFIALSYVLILRAVLQLPSKEARLKALSTCGSHICVILIFYTPALFSFLTHRFGHHVPPHVHILLa 253
                       250       260
                ....*....|....*....|
gi 22128953 282 -VYTFVTPLLNPLIYTLRNK 300
Cdd:cd15917 254 nLYLLLPPMLNPIVYGVRTK 273
7tmA_OR52B-like cd15221
olfactory receptor subfamily 52B and related proteins, member of the class A family of ...
43-300 2.77e-51

olfactory receptor subfamily 52B and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor (OR) subfamilies 52B, 52D, 52H and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320349  Cd Length: 275  Bit Score: 170.55  E-value: 2.77e-51
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15221  15 LLGNSLLLFVIVTERSLHEPMYLFLSMLAVTDLLLSTTTVPKMLAIFWFGAGEISFDGCLTQMFFVHFVFVTESAILLAM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQeINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15221  95 AFDRYVAICYPLRYTTILTHSVIGKIGVAAVARSFCIVFPFVFLLKRLPYCGHNV-IPHTYCEHMGIARLACADITVNIW 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 203 VLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIAL- 281
Cdd:cd15221 174 YGLTVALLTVGLDVVLIAVSYALILRAVFRLPSKDARLKALSTCGSHVCVILMFYTPAFFSFLTHRFGRHIPRHVHILLa 253
                       250       260
                ....*....|....*....|
gi 22128953 282 -VYTFVTPLLNPLIYTLRNK 300
Cdd:cd15221 254 nLYVLVPPMLNPIVYGVKTK 273
7tmA_OR52I-like cd15950
olfactory receptor subfamily 52I and related proteins, member of the class A family of ...
41-302 8.64e-51

olfactory receptor subfamily 52I and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52I and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320616  Cd Length: 275  Bit Score: 169.13  E-value: 8.64e-51
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15950  13 IALLGNGTILLVIKLDPSLHEPMYYFLCMLAVIDLVMSTSIVPKMLSIFWLGSAEISFEACFTQMFFVHSFTAVESGVLL 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGhDQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15950  93 AMAFDRYVAICHPLRYSAILTSQVIAQIGLAIVLRALLFMTPLTCLVTSLPYCG-SRVVPHSYCEHMAVVKLACADPRPS 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQY--GCCSLVYLRPRSSTSEDEDRQ 278
Cdd:cd15950 172 SLYSITGSTLVVGTDSAFIAVSYGLILRAVLGLSSKEARLKAFSTCGSHVCVILLFYipGLLSIYTQRFGQGVPPHTQVL 251
                       250       260
                ....*....|....*....|....
gi 22128953 279 IALVYTFVTPLLNPLIYTLRNKDV 302
Cdd:cd15950 252 LADLYLLVPPMLNPIIYGMRTKQI 275
7tmA_OR52E-like cd15952
olfactory receptor subfamily 52E and related proteins, member of the class A family of ...
43-302 1.88e-50

olfactory receptor subfamily 52E and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52E and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320618  Cd Length: 274  Bit Score: 168.33  E-value: 1.88e-50
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15952  15 LLGNCTILFVIKTEQSLHQPMFYFLAMLSTIDLGLSTATIPKMLGIFWFNLREISFGGCLAQMFFIHTFTGMESAVLVAM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHdQEINHFLCDVPPVLRLACADIHVHqa 202
Cdd:cd15952  95 AFDRYVAICNPLRYTTILTNKVISVIALGIVLRPLLLVLPFVFLILRLPFCGH-NIIPHTYCEHMGIAKLACASIRIN-- 171
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 203 VLYVVG-ILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQI-- 279
Cdd:cd15952 172 IIYGLFaISVLVLDVILIALSYVLILRAVFRLPSHDARLKALSTCGSHVCVILAFYTPALFSFLTHRFGHNIPRYIHIll 251
                       250       260
                ....*....|....*....|...
gi 22128953 280 ALVYTFVTPLLNPLIYTLRNKDV 302
Cdd:cd15952 252 ANLYVVLPPMLNPVIYGVRTKQI 274
7tmA_OR52P-like cd15953
olfactory receptor subfamily 52P and related proteins, member of the class A family of ...
42-300 3.36e-50

olfactory receptor subfamily 52P and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52P and related proteins in other mammals, sauropsids and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 341354  Cd Length: 275  Bit Score: 167.83  E-value: 3.36e-50
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  42 ILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAV 121
Cdd:cd15953  14 TLLGNCTILFVVGKEQSLHKPMYLLLCMLALTDLVLSTSVVPKALCIFWFNLKEITFSGCLTQMFFIHTLSIMESAVLVA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 122 MAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCgHDQEINHFLCDVPPVLRLACADIHVHQ 201
Cdd:cd15953  94 MAFDRYVAICNPLRYATILTNSRIAKLGLVGLIRGVLLILPLPLLLSRLPFC-ANRIIPHTYCEHMAVVKLACGDTTINR 172
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 202 AVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIAL 281
Cdd:cd15953 173 IYGLVVALLVVGLDLLLIALSYALIIRAVLRLSSKKARQKALNTCTAHICVILMSYTPALFSFLTHRFGQGIAPHIHIIL 252
                       250       260
                ....*....|....*....|.
gi 22128953 282 --VYTFVTPLLNPLIYTLRNK 300
Cdd:cd15953 253 anLYLLVPPMLNPIIYGVKTK 273
7tmA_OR52R_52L-like cd15951
olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of ...
43-302 1.41e-45

olfactory receptor subfamily 52R, 52L, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamilies 52R, 52L and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320617  Cd Length: 275  Bit Score: 155.58  E-value: 1.41e-45
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15951  15 LLGNFTILFIVKTEPSLHEPMYLFLCMLAITDLVLSTSTLPKMLSIFWFNSREIDFSACLTQMFFIHSFSTMESGIFVAM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHdQEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15951  95 ALDRYVAICNPLRHSTILTNSVVAKIGLAVVLRGGILVSPHPFLLRRLPYCRT-NIIPHTYCEHMAVVKLACADTRVSRA 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 203 VLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQI--A 280
Cdd:cd15951 174 YGLSVAFLVGGLDVIFIAVSYIQILRAVFKLPSKEARLKTFGTCGSHICVILVFYIPALFSFLTHRFGHNVPPHVHIliA 253
                       250       260
                ....*....|....*....|..
gi 22128953 281 LVYTFVTPLLNPLIYTLRNKDV 302
Cdd:cd15951 254 NVYLLVPPMLNPIIYGVRTKQI 275
7tm_4 pfam13853
Olfactory receptor; The members of this family are transmembrane olfactory receptors.
41-307 2.30e-43

Olfactory receptor; The members of this family are transmembrane olfactory receptors.


Pssm-ID: 404695  Cd Length: 278  Bit Score: 149.96  E-value: 2.30e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953    41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:pfam13853   7 IIFLGNGTILFVIKTESSLHQPMYLFLAMLALIDLGLSASTLPTVLGIFWFGLREISFEACLTQMFFIHKFSIMESAVLL 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953   121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQeINHFLCDVPPVLRLACADIHVH 200
Cdd:pfam13853  87 AMAVDRFVAICSPLRYTTILTNPVISRIGLGVSVRSFILVLPLPFLLRRLPFCGHHV-LSHSYCLHMGLARLSCADIKVN 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953   201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQI- 279
Cdd:pfam13853 166 NIYGLFVVTSTFGIDSLLIVLSYGLILRTVLGIASREGRLKALNTCGSHVCAVLAFYTPMIGLSMVHRFGHNVPPLLQIm 245
                         250       260
                  ....*....|....*....|....*....
gi 22128953   280 -ALVYTFVTPLLNPLIYTLRNKDVKGALK 307
Cdd:pfam13853 246 mANAYLFFPPVLNPIVYSVKTKQIRDCVK 274
7tm_1 pfam00001
7 transmembrane receptor (rhodopsin family); This family contains, amongst other ...
45-295 8.35e-43

7 transmembrane receptor (rhodopsin family); This family contains, amongst other G-protein-coupled receptors (GCPRs), members of the opsin family, which have been considered to be typical members of the rhodopsin superfamily. They share several motifs, mainly the seven transmembrane helices, GCPRs of the rhodopsin superfamily. All opsins bind a chromophore, such as 11-cis-retinal. The function of most opsins other than the photoisomerases is split into two steps: light absorption and G-protein activation. Photoisomerases, on the other hand, are not coupled to G-proteins - they are thought to generate and supply the chromophore that is used by visual opsins.


Pssm-ID: 459624 [Multi-domain]  Cd Length: 256  Bit Score: 147.83  E-value: 8.35e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953    45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLML-SNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMA 123
Cdd:pfam00001   1 GNLLVILVILRNKKLRTPTNIFLLNLAVADLLFSLLTLPFWLvYYLNHGDWPFGSALCKIVGALFVVNGYASILLLTAIS 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953   124 YDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLqltaLIFTLPFCGHDQEINHFLCDVPPVLRLACadihvHQAV 203
Cdd:pfam00001  81 IDRYLAIVHPLRYKRRRTPRRAKVLILVIWVLALLLSL----PPLLFGWTLTVPEGNVTVCFIDFPEDLSK-----PVSY 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953   204 LYVVGILVLTVPFLLICISYVFIASTILRMRSAEGR-------QRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDED 276
Cdd:pfam00001 152 TLLISVLGFLLPLLVILVCYTLIIRTLRKSASKQKSsertqrrRKALKTLAVVVVVFILCWLPYHIVNLLDSLALDCELS 231
                         250       260
                  ....*....|....*....|....*
gi 22128953   277 R------QIALVYTFVTPLLNPLIY 295
Cdd:pfam00001 232 RlldkalSVTLWLAYVNSCLNPIIY 256
7tmA_OR52K-like cd15948
olfactory receptor subfamily 52K and related proteins, member of the class A family of ...
43-303 5.10e-42

olfactory receptor subfamily 52K and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52K and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320614 [Multi-domain]  Cd Length: 277  Bit Score: 146.59  E-value: 5.10e-42
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15948  16 LLGNCTLLYVIKTEPSLHEPMFYFLAMLAVIDLVLSTTTVPKILSIFWFNSREINFNACLVQMFFLHSFSIMESAVLLAM 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGhDQEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15948  96 AFDRYVAICNPLRYATILTNSVITKIGLAALARAVTLMTPLPFLLRRLPYCR-SHVIAHCYCEHMAVVKLACGDTRFNNI 174
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 203 VLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYG--CCSLVYLRPRSSTSEDEDRQIA 280
Cdd:cd15948 175 YGIAVALFIVGLDLMFIILSYVFILRAVLSLASKEEQLKAFGTCGSHICAILVFYTpvVLSSTMHRFARHVAPHVHILLA 254
                       250       260
                ....*....|....*....|...
gi 22128953 281 LVYTFVTPLLNPLIYTLRNKDVK 303
Cdd:cd15948 255 NFYLLFPPMMNPIVYGVKTKQIR 277
7tmA_OR52W-like cd15956
olfactory receptor subfamily 52W and related proteins, member of the class A family of ...
43-302 5.23e-39

olfactory receptor subfamily 52W and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52W and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320622 [Multi-domain]  Cd Length: 275  Bit Score: 138.46  E-value: 5.23e-39
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15956  15 LLGNGVLLSVVWKEHRLHQPMFLFLAMLAATDLVLALSTAPKLLAILWFGATAISSYVCLSQMFLVHAFSAMESGVLVAM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKlCVQMVMGSWSL-ALFLSLQLTALIFTLPFCGhDQEINHFLCDVPPVLRLACADIHVHQ 201
Cdd:cd15956  95 ALDRFVAICNPLHYATILTLE-VVAKAGLLLALrGVAIVIPFPLLVCRLSFCA-SHTIAHTYCEHMAVVKLACGATTVDS 172
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 202 AVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQY--GCCSLVYLRPRSSTSEDEDRQI 279
Cdd:cd15956 173 LYGLALALFIGGGDVLFIAYSYGLIVKTVLRLPSPEARGKAFSTCSAHICVILFFYipGLLSVLMHRFGHSVPSAAHVLL 252
                       250       260
                ....*....|....*....|...
gi 22128953 280 ALVYTFVTPLLNPLIYTLRNKDV 302
Cdd:cd15956 253 SNLYLLLPPALNPIVYGIRTKQI 275
7tmA_OR52N-like cd15954
olfactory receptor subfamily 52N and related proteins, member of the class A family of ...
43-302 1.67e-35

olfactory receptor subfamily 52N and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52N and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320620  Cd Length: 276  Bit Score: 129.56  E-value: 1.67e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15954  15 MVGNCGLLYLIWIEEALHRPMYYFLSMLSFTDITLCTTMVPKAMCIFWFNLKEISFNACLVQMFFVHTFTGMESGVLMLM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCgHDQEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15954  95 ALDRYVAICYPLRYATILTNPVITKAGLATFLRGVMLIIPFPLLTKRLPYC-RGNFIPHTYCDHMSVVKLACANIRVDAI 173
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 203 VLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQ---I 279
Cdd:cd15954 174 YGLMVALLIGGFDILCISVSYAMILRAVVSLSSKEARSKAFSTCTAHICAIVITYTPAFFTFFAHRFGGHHITPHIhiiM 253
                       250       260
                ....*....|....*....|...
gi 22128953 280 ALVYTFVTPLLNPLIYTLRNKDV 302
Cdd:cd15954 254 ANLYLLLPPMMNPIVYGVKTKQI 276
7tmA_OR52M-like cd15949
olfactory receptor subfamily 52M and related proteins, member of the class A family of ...
41-303 3.29e-35

olfactory receptor subfamily 52M and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52M and related proteins in other mammals, sauropsids, and amphibians. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320615  Cd Length: 292  Bit Score: 129.13  E-value: 3.29e-35
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15949  29 IAVLGNCTILFIIKSEPSLHQPMYFFLSMLAIIDLVLSTSTMPKLLAIFWFSSNEIPLHACLLQMFLIHSFSAIESGIFL 108
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCgHDQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15949 109 AMAFDRYVAICNPLRHKTILTNTTVIRIGLAAVIRGVLYISPLPLLVRRLPWY-RTNIIAHSYCEHMAVVGLACGDVSIN 187
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQY---GCCSLVYlRPRSSTSEDEDR 277
Cdd:cd15949 188 NHYGLTIGFLVLIMDSLFIVLSYIMILRVVQRLATSEARLKTFGTCVSHVCAILAFYvpiAVSSLIH-RFGQNVPPPTHI 266
                       250       260
                ....*....|....*....|....*.
gi 22128953 278 QIALVYTFVTPLLNPLIYTLRNKDVK 303
Cdd:cd15949 267 LLANFYLLIPPMLNPIVYGVRTKQIQ 292
7tmA_OR52A-like cd15955
olfactory receptor subfamily 52A and related proteins, member of the class A family of ...
45-302 2.07e-33

olfactory receptor subfamily 52A and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes human olfactory receptor subfamily 52A and related proteins in other mammals and sauropsids. Olfactory receptors (ORs) play a central role in olfaction, the sense of smell. ORs belong to the class A rhodopsin-like family of G protein-coupled receptors and constitute the largest multigene family in mammals of approximately 1,000 genes. More than 60% of human ORs are non-functional pseudogenes compared to only about 20% in mouse. Each OR can recognize structurally similar odorants, and a single odorant can be detected by several ORs. Binding of an odorant to the olfactory receptor induces a conformational change that leads to the activation of the olfactory-specific G protein (Golf). The G protein (Golf and/or Gs) in turn stimulates adenylate cyclase to make cAMP. The cAMP opens cyclic nucleotide-gated ion channels, which allow the influx of calcium and sodium ions, resulting in depolarization of the olfactory receptor neuron and triggering an action potential which transmits this information to the brain. A consensus nomenclature system based on evolutionary divergence is used here to classify the olfactory receptor family. The nomenclature begins with the root name OR, followed by an integer representing a family, a letter denoting a subfamily, and an integer representing the individual gene within the subfamily.


Pssm-ID: 320621 [Multi-domain]  Cd Length: 276  Bit Score: 123.73  E-value: 2.07e-33
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMAY 124
Cdd:cd15955  17 GNCTLLIVIKRERSLHQPMYIFLAMLAATDLGLCPCILPKMLAIFWFQLREISFNACLAQMFFIHTLQAFESGILLAMAL 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 125 DRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQEINHFLCDVPPVLRLACADIHVHQAVL 204
Cdd:cd15955  97 DRYVAICHPLRHSSILTPQVLLGIGVLVVVRAVVLIIPCPLLIKLRLHHFRSTVISHSYCEHMAVVKLAADDVRVNKIYG 176
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 205 YVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSEDEDRQIAL--V 282
Cdd:cd15955 177 LFVAFSILGFDIIFITTSYALIFRAVFRLPQKEARLKAFNTCTAHIFVFLLFYTLAFFSFFAHRFGHHVAPYVHILLsnL 256
                       250       260
                ....*....|....*....|
gi 22128953 283 YTFVTPLLNPLIYTLRNKDV 302
Cdd:cd15955 257 YLLVPPVLNPIVYGVKTKQI 276
7tm_classA_rhodopsin-like cd00637
rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor ...
42-299 2.30e-26

rhodopsin receptor-like class A family of the seven-transmembrane G protein-coupled receptor superfamily; Class A rhodopsin-like receptors constitute about 90% of all GPCRs. The class A GPCRs include the light-sensitive rhodopsin as well as receptors for biogenic amines, lipids, nucleotides, odorants, peptide hormones, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. Based on sequence similarity, GPCRs can be divided into six major classes: class A (rhodopsin-like family), class B (Methuselah-like, adhesion and secretin-like receptor family), class C (metabotropic glutamate receptor family), class D (fungal mating pheromone receptors), class E (cAMP receptor family), and class F (frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410626 [Multi-domain]  Cd Length: 275  Bit Score: 105.06  E-value: 2.30e-26
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  42 ILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAV 121
Cdd:cd00637  12 GLVGNLLVILVILRNRRLRTVTNYFILNLAVADLLVGLLVIPFSLVSLLLGRWWFGDALCKLLGFLQSVSLLASILTLTA 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 122 MAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLqltaliftLPFCGHDQEINHFLCDVPPVlrlaCADIHVHQ 201
Cdd:cd00637  92 ISVDRYLAIVHPLRYRRRFTRRRAKLLIALIWLLSLLLAL--------PPLLGWGVYDYGGYCCCCLC----WPDLTLSK 159
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 202 AVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSH----------LTVVLLQYGCC--------SLV 263
Cdd:cd00637 160 AYTIFLFVLLFLLPLLVIIVCYVRIFRKLRRHRRRIRSSSSNSSRRRRrrrerkvtktLLIVVVVFLLCwlpyfillLLD 239
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 22128953 264 YLRPRSSTSEDEDRQIALVYTFVTPLLNPLIYTLRN 299
Cdd:cd00637 240 VFGPDPSPLPRILYFLALLLAYLNSAINPIIYAFFN 275
7tmA_amine_R-like cd14967
amine receptors and similar proteins, member of the class A family of seven-transmembrane G ...
41-306 7.06e-17

amine receptors and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Amine receptors of the class A family of GPCRs include adrenoceptors, 5-HT (serotonin) receptors, muscarinic cholinergic receptors, dopamine receptors, histamine receptors, and trace amine receptors. The receptors of amine subfamily are major therapeutic targets for the treatment of neurological disorders and psychiatric diseases. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320098 [Multi-domain]  Cd Length: 259  Bit Score: 78.76  E-value: 7.06e-17
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd14967  12 VTVFGNLLVILAVYRNRRLRTVTNYFIVSLAVADLLVALLVMPFSAVYTLLGYWPFGPVLCRFWIALDVLCCTASILNLC 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLqltaliftLPFCGHdqeinHFLCDVPPVLRLACAdiHVH 200
Cdd:cd14967  92 AISLDRYLAITRPLRYRQLMTKKRALIMIAAVWVYSLLISL--------PPLVGW-----RDETQPSVVDCECEF--TPN 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRsaegrqRAFSTcsshLTVVLLQYGCC----SLVYLRprsSTSEDED 276
Cdd:cd14967 157 KIYVLVSSVISFFIPLLIMIVLYARIFRVARREL------KAAKT----LAIIVGAFLLCwlpfFIIYLV---SAFCPPD 223
                       250       260       270
                ....*....|....*....|....*....|....*.
gi 22128953 277 RQIALVYTFVTPL------LNPLIYTLRNKDVKGAL 306
Cdd:cd14967 224 CVPPILYAVFFWLgylnsaLNPIIYALFNRDFRRAF 259
7tmA_EDG-like cd14972
endothelial differentiation gene family, member of the class A family of seven-transmembrane G ...
42-306 2.35e-13

endothelial differentiation gene family, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents the endothelial differentiation gene (Edg) family of G-protein coupled receptors, melanocortin/ACTH receptors, and cannabinoid receptors as well as their closely related receptors. The Edg GPCRs bind blood borne lysophospholipids including sphingosine-1-phosphate (S1P) and lysophosphatidic acid (LPA), which are involved in the regulation of cell proliferation, survival, migration, invasion, endothelial cell shape change and cytoskeletal remodeling. The Edg receptors are classified into two subfamilies: the lysophosphatidic acid subfamily that includes LPA1 (Edg2), LPA2 (Edg4), and LPA3 (Edg7); and the S1P subfamily that includes S1P1 (Edg1), S1P2 (Edg5), S1P3 (Edg3), S1P4 (Edg6), and S1P5 (Edg8). Melanocortin receptors bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. Two types of cannabinoid receptors, CB1 and CB2, are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 341317 [Multi-domain]  Cd Length: 275  Bit Score: 68.86  E-value: 2.35e-13
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  42 ILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAV 121
Cdd:cd14972  12 IVVENSLVLAAIIKNRRLHKPMYILIANLAAADLLAGIAFVFTFLSVLLVSLTPSPATWLLRKGSLVLSLLASAYSLLAI 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 122 mAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALflslqltaLIFTLPFCGHdqeiNHFLCDVPpvlrlACADIHVHQ 201
Cdd:cd14972  92 -AVDRYISIVHGLTYVNNVTNKRVKVLIALVWVWSV--------LLALLPVLGW----NCVLCDQE-----SCSPLGPGL 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 202 AVLYVVGILV-LTVPFLLICISYVFI--------ASTILRMRSAEGRQRAFSTCSS-HLTVVLLQYGCC---SLVYLRPR 268
Cdd:cd14972 154 PKSYLVLILVfFFIALVIIVFLYVRIfwclwrhaNAIAARQEAAVPAQPSTSRKLAkTVVIVLGVFLVCwlpLLILLVLD 233
                       250       260       270       280
                ....*....|....*....|....*....|....*....|..
gi 22128953 269 SSTSEDEDRQIALVYTFVTPLLN----PLIYTLRNKDVKGAL 306
Cdd:cd14972 234 VLCPSVCDIQAVFYYFLVLALLNsainPIIYAFRLKEMRRAV 275
7tmA_CCKR-like cd14993
cholecystokinin receptors and related proteins, member of the class A family of ...
43-300 1.56e-12

cholecystokinin receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents four G-protein coupled receptors that are members of the RFamide receptor family, including cholecystokinin receptors (CCK-AR and CCK-BR), orexin receptors (OXR), neuropeptide FF receptors (NPFFR), and pyroglutamylated RFamide peptide receptor (QRFPR). These RFamide receptors are activated by their endogenous peptide ligands that share a common C-terminal arginine (R) and an amidated phenylanine (F) motif. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors. Orexins (OXs; also referred to as hypocretins) are neuropeptide hormones that regulate the sleep-wake cycle and potently influence homeostatic systems regulating appetite and feeding behavior or modulating emotional responses such as anxiety or panic. OXs are synthesized as prepro-orexin (PPO) in the hypothalamus and then proteolytically cleaved into two forms of isoforms: orexin-A (OX-A) and orexin-B (OX-B). OXA is a 33 amino-acid peptide with N-terminal pyroglutamyl residue and two intramolecular disulfide bonds, whereas OXB is a 28 amino-acid linear peptide with no disulfide bonds. OX-A binds orexin receptor 1 (OX1R) with high-affinity, but also binds with somewhat low-affinity to OX2R, and signals primarily to Gq coupling, whereas OX-B shows a strong preference for the orexin receptor 2 (OX2R) and signals through Gq or Gi/o coupling. The 26RFa, also known as QRFP (Pyroglutamylated RFamide peptide), is a 26-amino acid residue peptide that exerts similar orexigenic activity including the regulation of feeding behavior in mammals. It is the ligand for G-protein coupled receptor 103 (GPR103), which is predominantly expressed in paraventricular (PVN) and ventromedial (VMH) nuclei of the hypothalamus. GPR103 shares significant protein sequence homology with orexin receptors (OX1R and OX2R), which have recently shown to produce a neuroprotective effect in Alzheimer's disease by forming a functional heterodimer with GPR103. Neuropeptide FF (NPFF) is a mammalian octapeptide that has been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of NPFF are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R.


Pssm-ID: 320124 [Multi-domain]  Cd Length: 296  Bit Score: 66.85  E-value: 1.56e-12
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd14993  15 LVGNSLVIAVVLRNKHMRTVTNYFLVNLAVADLLVSLFCMPLTLLENVYRPWVFGEVLCKAVPYLQGVSVSASVLTLVAI 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLtALIFTLPFCGHDQ--EINHFLCD---VPPVLRLAcadi 197
Cdd:cd14993  95 SIDRYLAICYPLKARRVSTKRRARIIIVAIWVIAIIIMLPL-LVVYELEEIISSEpgTITIYICTedwPSPELRKA---- 169
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 198 hvHQAVLYVVgilVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSH-----------LTVVLLQYGCCSL---- 262
Cdd:cd14993 170 --YNVALFVV---LYVLPLLIISVAYSLIGRRLWRRKPPGDRGSANSTSSRRilrskkkvarmLIVVVVLFALSWLpyyv 244
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*.
gi 22128953 263 --VYLRPRSSTSEDEDRQIALVYTFVTPL------LNPLIYTLRNK 300
Cdd:cd14993 245 lsILLDFGPLSSEESDENFLLILPFAQLLgysnsaINPIIYCFMSK 290
7tmA_Opsins_type2_animals cd14969
type 2 opsins in animals, member of the class A family of seven-transmembrane G ...
43-306 2.67e-10

type 2 opsins in animals, member of the class A family of seven-transmembrane G protein-coupled receptors; This rhodopsin family represents the type 2 opsins found in vertebrates and invertebrates except sponge. Type 2 opsins primarily function as G protein coupled receptors and are responsible for vision as well as for circadian rhythm and pigment regulation. On the contrary, type 1 opsins such as bacteriorhodopsin and proteorhodopsin are found in both prokaryotic and eukaryotic microbes, functioning as light-gated ion channels, proton pumps, sensory receptors and in other unknown functions. Although these two opsin types share seven-transmembrane domain topology and a conserved lysine reside in the seventh helix, type 1 opsins do not activate G-proteins and are not evolutionarily related to type 2. Type 2 opsins can be classified into six distinct subfamilies including the vertebrate opsins/encephalopsins, the G(o) opsins, the G(s) opsins, the invertebrate G(q) opsins, the photoisomerases, and the neuropsins.


Pssm-ID: 381741 [Multi-domain]  Cd Length: 284  Bit Score: 59.91  E-value: 2.67e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd14969  15 VVLNGLVIIVFLKKKKLRTPLNLFLLNLALADLLMSVVGYPLSFYSNLSGRWSFGDPGCVIYGFAVTFLGLVSISTLAAL 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVqMVMGSWSLALFLSlqltalifTLPFCGhdqeINHFlcdVPPVLRLACA---DIHV 199
Cdd:cd14969  95 AFERYLVIVRPLKAFRLSKRRALI-LIAFIWLYGLFWA--------LPPLFG----WSSY---VPEGGGTSCSvdwYSKD 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 200 HQAVLYVVGILVLT--VPFLLICISYVFIASTILRM-RSAEGRQRAFSTCSS------HLTVVLLQ----------YGCC 260
Cdd:cd14969 159 PNSLSYIVSLFVFCffLPLAIIIFCYYKIYRTLRKMsKRAARRKNSAITKRTkkaekkVAKMVLVMivafliawtpYAVV 238
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|...
gi 22128953 261 SLVylrprssTSEDEDRQIALVYTFVTPLL-------NPLIYTLRNKDVKGAL 306
Cdd:cd14969 239 SLY-------VSFGGESTIPPLLATIPALFaksstiyNPIIYVFMNKQFRRAL 284
7tmA_Vasopressin_Oxytocin cd15196
vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G ...
41-177 6.75e-10

vasopressin and oxytocin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) and oxytocin are synthesized in the hypothalamus and are released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320324 [Multi-domain]  Cd Length: 264  Bit Score: 58.79  E-value: 6.75e-10
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTT-DVVPLMLSNI-FGAQKPISLAGCGTQMFFFVTLGSTdcFL 118
Cdd:cd15196  13 LALFGNSCVLLVLYRRRRKLSRMHLFILHLSVADLLVALfNVLPQLIWDItYRFYGGDLLCRLVKYLQVVGMYASS--YV 90
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 119 LAVMAYDRYVAICHPLHySLIMTKKLCVQMVMGSWSLALFLSL-QLtaLIFTLPFCGHDQ 177
Cdd:cd15196  91 LVATAIDRYIAICHPLS-SHRWTSRRVHLMVAIAWVLSLLLSIpQL--FIFSYQEVGSGV 147
7tmA_PrRP_R cd15394
prolactin-releasing peptide receptor, member of the class A family of seven-transmembrane G ...
45-238 1.01e-09

prolactin-releasing peptide receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Prolactin-releasing peptide (PrRP) receptor (previously known as GPR10) is expressed in the central nervous system with the highest levels located in the anterior pituitary and is activated by its endogenous ligand PrRP, a neuropeptide possessing a C-terminal Arg-Phe-amide motif. There are two active isoforms of PrRP in mammals: one consists of 20 amino acids (PrRP-20) and the other consists of 31 amino acids (PrRP-31), where PrRP-20 is a C-terminal fragment of PrRP-31. Binding of PrRP to the receptor coupled to G(i/o) proteins activates the extracellular signal-related kinase (ERK) and it can also couple to G(q) protein leading to an increase in intracellular calcium and activation of c-Jun N-terminal protein kinase (JNK). The PrRP receptor shares significant sequence homology with the neuropeptide Y (NPY) receptor, and micromolar levels of NPY can bind and completely inhibit the PrRP-evoked intracellular calcium response in PrRP receptor-expressing cells, suggesting that the PrRP receptor shares a common ancestor with the NPY receptors. PrRP has been shown to reduce food intake and body weight and modify body temperature when administered in rats. It also has been shown to decrease circulating growth hormone levels by activating somatostatin-secreting neurons in the hypothalamic periventricular nucleus.


Pssm-ID: 320516 [Multi-domain]  Cd Length: 286  Bit Score: 58.21  E-value: 1.01e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISlagcGTQMFFFVTLGST-----DCFLL 119
Cdd:cd15394  17 GNYLLIYVICRTKKMHNVTNFLIGNLAFSDMLMCATCVPLTLAYAFEPRGWVF----GRFMCYFVFLMQPvtvyvSVFTL 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 120 AVMAYDRYVAICHPLHYSliMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQEInhflcdvppvlrlaCADIHV 199
Cdd:cd15394  93 TAIAVDRYYVTVYPLRRR--ISRRTCAYIVAAIWLLSCGLALPAAAHTYYVEFKGLDFSI--------------CEEFWF 156
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....
gi 22128953 200 HQA---VLYVVGILVLT--VPFLLICISYVFIaSTILRMRSAEG 238
Cdd:cd15394 157 GQEkqrLAYACSTLLITyvLPLLAISLSYLRI-SVKLRNRVVPG 199
7tmA_SREB-like cd15005
super conserved receptor expressed in brain and related proteins, member of the class A family ...
43-161 1.28e-09

super conserved receptor expressed in brain and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; The SREB (super conserved receptor expressed in brain) subfamily consists of at least three members, named SREB1 (GPR27), SREB2 (GPR85), and SREB3 (GPR173). They are very highly conserved G protein-coupled receptors throughout vertebrate evolution, however no endogenous ligands have yet been identified. SREB2 is greatly expressed in brain regions involved in psychiatric disorders and cognition, such as the hippocampal dentate gyrus. Genetic studies in both humans and mice have shown that SREB2 influences brain size and negatively regulates hippocampal adult neurogenesis and neurogenesis-dependent cognitive function, all of which are suggesting a potential link between SREB2 and schizophrenia. All three SREB genes are highly expressed in differentiated hippocampal neural stem cells. Furthermore, all GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320134 [Multi-domain]  Cd Length: 329  Bit Score: 58.24  E-value: 1.28e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVP-LMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAV 121
Cdd:cd15005  15 LAGNLLFSVLIVRDRSLHRAPYYFLLDLCLADGLRSLACFPfVMASVRHGSGWIYGALSCKVIAFLAVLFCFHSAFTLFC 94
                        90       100       110       120
                ....*....|....*....|....*....|....*....|
gi 22128953 122 MAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15005  95 IAVTRYMAIAHHRFYAKRMTFWTCLAVICMAWTLSVAMAF 134
7tmA_NTSR-like cd14979
neurotensin receptors and related G protein-coupled receptors, member of the class A family of ...
45-245 1.78e-09

neurotensin receptors and related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes the neurotensin receptors and related G-protein coupled receptors, including neuromedin U receptors, growth hormone secretagogue receptor, motilin receptor, the putative GPR39 and the capa receptors from insects. These receptors all bind peptide hormones with diverse physiological effects. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320110 [Multi-domain]  Cd Length: 300  Bit Score: 57.75  E-value: 1.78e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGaQKPISL--AGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd14979  17 GNLLTCIVIARHKSLRTTTNYYLFSLAVSDLLILLVGLPVELYNFWW-QYPWAFgdGGCKLYYFLFEACTYATVLTIVAL 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFT--LPFCGHDQEINHFLCDVPPvlrlacaDIHVH 200
Cdd:cd14979  96 SVERYVAICHPLKAKTLVTKRRVKRFILAIWLVSILCAIPILFLMGIqyLNGPLPGPVPDSAVCTLVV-------DRSTF 168
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFST 245
Cdd:cd14979 169 KYVFQVSTFIFFVLPMFVISILYFRIGVKLRSMRNIKKGTRAQGT 213
7tmA_Adenosine_R cd14968
adenosine receptor subfamily, member of the class A family of seven-transmembrane G ...
45-306 4.82e-09

adenosine receptor subfamily, member of the class A family of seven-transmembrane G protein-coupled receptors; The adenosine receptors (or P1 receptors), a family of G protein-coupled purinergic receptors, bind adenosine as their endogenous ligand. There are four types of adenosine receptors in human, designated as A1, A2A, A2B, and A3. Each type is encoded by a different gene and has distinct functions with some overlap. For example, both A1 and A2A receptors are involved in regulating myocardial oxygen consumption and coronary blood flow in the heart, while the A2A receptor also has a broad spectrum of anti-inflammatory effects in the body. These two receptors also expressed in the brain, where they have important roles in the release of other neurotransmitters such as dopamine and glutamate, while the A2B and A3 receptors found primarily in the periphery and play important roles in inflammation and immune responses. The A1 and A3 receptors preferentially interact with G proteins of the G(i/o) family, thereby lowering the intracellular cAMP levels, whereas the A2A and A2B receptors interact with G proteins of the G(s) family, activating adenylate cyclase to elevate cAMP levels.


Pssm-ID: 341316 [Multi-domain]  Cd Length: 285  Bit Score: 56.49  E-value: 4.82e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLsnIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMAY 124
Cdd:cd14968  17 GNVLVIWAVKLNRALRTVTNYFIVSLAVADILVGALAIPLAI--LISLGLPTNFHGCLFMACLVLVLTQSSIFSLLAIAI 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 125 DRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLqltaliftLPFCG-HDQEINHFLCDVPPVlrlACADIHVHQAV 203
Cdd:cd14968  95 DRYLAIKIPLRYKSLVTGRRAWGAIAVCWVLSFLVGL--------TPMFGwNNGAPLESGCGEGGI---QCLFEEVIPMD 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 204 LYVVGILVLTV--PFLLICISYVFIASTILRmrsaEGRQRAFSTCSSH--------------LTVVLLQYGCC------- 260
Cdd:cd14968 164 YMVYFNFFACVlvPLLIMLVIYLRIFRVIRK----QLRQIESLLRSRRsrstlqkevkaaksLAIILFLFALCwlplhii 239
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 22128953 261 -SLVYLRPRSSTSEDEdRQIALVYTFVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd14968 240 nCITLFCPECKVPKIL-TYIAILLSHANSAVNPIVYAYRIRKFRQTF 285
7tmA_Opioid_R-like cd14970
opioid receptors and related proteins, member of the class A family of seven-transmembrane G ...
43-295 8.71e-09

opioid receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes opioid receptors, somatostatin receptors, melanin-concentrating hormone receptors (MCHRs), and neuropeptides B/W receptors. Together they constitute the opioid receptor-like family, members of the class A G-protein coupled receptors. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and are involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others. G protein-coupled somatostatin receptors (SSTRs), which display strong sequence similarity with opioid receptors, binds somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. MCHR binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Neuropeptides B/W receptors are primarily expressed in the CNS and stimulate the cortisol secretion by activating the adenylate cyclase- and the phospholipase C-dependent signaling pathways.


Pssm-ID: 320101 [Multi-domain]  Cd Length: 282  Bit Score: 55.38  E-value: 8.71e-09
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTdVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd14970  15 LTGNSLVIYVILRYSKMKTVTNIYILNLAVADELFLL-GLPFLATSYLLGYWPFGEVMCKIVLSVDAYNMFTSIFCLTVM 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQEINhflcdvppvLRLACADIHVHQA 202
Cdd:cd14970  94 SVDRYLAVVHPVKSLRFRTPRKAKLVSLCVWALSLVLGLPVIIFARTLQEEGGTISCN---------LQWPDPPDYWGRV 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 203 VLYVVGILVLTVPFLLICISYVFI-----ASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSL---VYLRPRSSTSED 274
Cdd:cd14970 165 FTIYTFVLGFAVPLLVITVCYSLIirrlrSSRNLSTSGAREKRRARRKVTRLVLVVVAVFVVCWLpfhVFQIVRLLIDPP 244
                       250       260
                ....*....|....*....|....*..
gi 22128953 275 EDRQIALVYTFVTPL------LNPLIY 295
Cdd:cd14970 245 ETLTVVGVFLFCIALsyanscLNPILY 271
7tmA_TACR-like cd15202
tachykinin receptors and related receptors, member of the class A family of ...
43-230 2.31e-08

tachykinin receptors and related receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the neurokinin/tachykinin receptors and its closely related receptors such as orphan GPR83 and leucokinin-like peptide receptor. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320330 [Multi-domain]  Cd Length: 288  Bit Score: 54.43  E-value: 2.31e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15202  15 LFGNVLVCWIIFKNQRMRTVTNYFIVNLAVADIMITLFNTPFTFVRAVNNTWIFGLFMCHFSNFAQYCSVHVSAYTLTAI 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLimTKKLCVQMVMGSWSLALFLSLQLtALIFTLPFCGHDQEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15202  95 AVDRYQAIMHPLKPRI--SKTKAKFIIAVIWTLALAFALPH-AICSKLETFKYSEDIVRSLCLEDWPERADLFWKYYDLA 171
                       170       180
                ....*....|....*....|....*...
gi 22128953 203 VLyvvgILVLTVPFLLICISYVFIASTI 230
Cdd:cd15202 172 LF----ILQYFLPLLVISFAYARVGIKL 195
7tmA_Adenosine_R_A2B cd15069
adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G ...
43-161 6.49e-08

adenosine receptor subtype 2AB, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2B receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320197 [Multi-domain]  Cd Length: 294  Bit Score: 53.01  E-value: 6.49e-08
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQkpISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15069  15 VAGNVLVCAAVGTNSTLQTPTNYFLVSLAAADVAVGLFAIPFAITISLGFC--TDFHSCLFLACFVLVLTQSSIFSLLAV 92
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15069  93 AVDRYLAIKVPLRYKSLVTGKRARGVIAVLWVLAFGIGL 131
7tmA_5-HT1E cd15335
serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G ...
46-306 2.12e-07

serotonin receptor subtype 1E, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320457 [Multi-domain]  Cd Length: 258  Bit Score: 51.08  E-value: 2.12e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  46 NAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMAYD 125
Cdd:cd15335  18 NSAVIAAICTTKKLHQPANYLICSLAVTDFLVAVLVMPLSITYIVMDTWTLGYFICEIWLSVDMTCCTCSILHLCVIALD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 126 RYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQltaliftlPFCGHDQEinhflcDVPPVLRLACADIHVHQAVLY 205
Cdd:cd15335  98 RYWAITDAIEYARKRTAKRAGLMILTVWTISIFISIP--------PLFWRNHH------DANIPSQCIIQHDHVIYTIYS 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 206 VVGilVLTVPFLLICISYVFIASTILRMRSAegrQRAFSTCSSHLTVVLLQYGCCSLVY-LRPRSSTSEDEDRQIALVYt 284
Cdd:cd15335 164 TFG--AFYIPLTLILILYYRIYHAASRERKA---ARILGLILGAFILSWLPFFIKELIVgLSVMTVSPEVADFLTWLGY- 237
                       250       260
                ....*....|....*....|..
gi 22128953 285 fVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15335 238 -VNSLVNPLLYTSFNEDFKLAF 258
7tmA_GPR119_R_insulinotropic_receptor cd15104
G protein-coupled receptor 119, also called glucose-dependent insulinotropic receptor, member ...
41-306 2.15e-07

G protein-coupled receptor 119, also called glucose-dependent insulinotropic receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR119 is activated by oleoylethanolamide (OEA), a naturally occurring bioactive lipid with hypophagic and anti-obesity effects. Immunohistochemistry and double-immunofluorescence studies revealed the predominant GPR119 localization in pancreatic polypeptide (PP)-cells of islets. In addition, GPR119 expression is elevated in islets of obese hyperglycemic mice as compared to control islets, suggesting a possible involvement of this receptor in the development of obesity and diabetes. GPR119 has a significant sequence similarity with the members of the endothelial differentiation gene family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320232 [Multi-domain]  Cd Length: 283  Bit Score: 51.22  E-value: 2.15e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSAL-HTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLL 119
Cdd:cd15104  12 LIITGNLLVIVALLKLIRKkDTKSNCFLLNLAIADFLVGLAIPGLATDELLSDGENTQKVLCLLRMCFVITSCAASVLSL 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 120 AVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFL-SLQLTALIFTL----PFCGHDQEInhflcdvppvlrlac 194
Cdd:cd15104  92 AAIAFDRYLALKQPLRYKQIMTGKSAGALIAGLWLYSGLIgFLPLISPQFQQtsykGKCSFFAAF--------------- 156
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 195 adihvHQAVLYVVGILVLTVPFLLI--CISYVF-IAS----TILRMRSAEGRQRAFSTCSSH-------------LTVVL 254
Cdd:cd15104 157 -----HPRVLLVLSCMVFFPALLLFvfCYCDILkIARvhsrAIYKVEHALARQIHPRRTLSDfkaartvavligcFLLSW 231
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|..
gi 22128953 255 LQYGCCSLVYLRPRSSTSEDEDRQIALVYTFVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15104 232 LPFQITGLVQALCDECKLYDVLEDYLWLLGLCNSLLNPWIYAFWQKEVRRAL 283
7tmA_NPYR-like cd15203
neuropeptide Y receptors and related proteins, member of the class A family of ...
43-249 4.52e-07

neuropeptide Y receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; NPY is a 36-amino acid peptide neurotransmitter with a C-terminal tyrosine amide residue that is widely distributed in the brain and the autonomic nervous system of many mammalian species. NPY exerts its functions through five, G-protein coupled receptor subtypes including NPY1R, NPY2R, NPY4R, NPY5R, and NPY6R; however, NPY6R is not functional in humans. NYP receptors are also activated by its two other family members, peptide YY (PYY) and pancreatic polypeptide (PP). They typically couple to Gi or Go proteins, which leads to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels, and are involved in diverse physiological roles including appetite regulation, circadian rhythm, and anxiety. Also included in this subgroup is prolactin-releasing peptide (PrRP) receptor (previously known as GPR10), which is activated by its endogenous ligand PrRP, a neuropeptide possessing C-terminal Arg-Phe-amide motif. There are two active isoforms of PrRP in mammals: one consists of 20 amino acid residues (PrRP-20) and the other consists of 31 amino acid residues (PrRP-31). PrRP receptor shows significant sequence homology to the NPY receptors, and a micromolar level of NPY can bind and completely inhibit the PrRP-evoked intracellular calcium response in PrRP receptor-expressing cells, suggesting that the PrRP receptor shares a common ancestor with the NPY receptors.


Pssm-ID: 320331 [Multi-domain]  Cd Length: 293  Bit Score: 50.30  E-value: 4.52e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15203  15 VVGNLLVIYVVLRNKSMQTVTNIFILNLAVSDLLLCLVSLPFTLIYTLTKNWPFGSILCKLVPSLQGVSIFVSTLTLTAI 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSliMTKKLCVQMVMGSWSLALFLSLQLtaLIFtlpfcghdQEINHFLCDVPPVLRLACAD--IHVH 200
Cdd:cd15203  95 AIDRYQLIVYPTRPR--MSKRHALLIIALIWILSLLLSLPL--AIF--------QELSDVPIEILPYCGYFCTEswPSSS 162
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|.
gi 22128953 201 QAVLYVVGILVLT--VPFLLICISYVFIASTiLRMRSAEGRQRAFSTCSSH 249
Cdd:cd15203 163 SRLIYTISVLVLQfvIPLLIISFCYFRISLK-LRKRVKKKRGKRTLSSRRR 212
7tmA_TAARs cd15055
trace amine-associated receptors, member of the class A family of seven-transmembrane G ...
44-161 8.70e-07

trace amine-associated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptors (TAARs) are a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320183 [Multi-domain]  Cd Length: 285  Bit Score: 49.47  E-value: 8.70e-07
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  44 CGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPL----------MLSNIFgaqkpislagCGTQMFFFVTLGS 113
Cdd:cd15055  16 LGNLLVIISISHFKQLHTPTNLLLLSLAVADFLVGLLVMPFsmirsietcwYFGDTF----------CKLHSSLDYILTS 85
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*...
gi 22128953 114 TDCFLLAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15055  86 ASIFNLVLIAIDRYVAVCDPLLYPTKITIRRVKICICLCWFVSALYSS 133
7tmA_5-HT6 cd15054
serotonin receptor subtype 6, member of the class A family of seven-transmembrane G ...
44-226 1.34e-06

serotonin receptor subtype 6, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT6 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the mammalian central nervous system (CNS). 5-HT6 receptors are selectively linked to G proteins of the G(s) family, which positively stimulate adenylate cyclase, causing cAMP formation and activation of protein kinase A. The 5-HT6 receptors mediates excitatory neurotransmission and are involved in learning and memory; thus they are promising targets for the treatment of cognitive impairment. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320182 [Multi-domain]  Cd Length: 267  Bit Score: 49.03  E-value: 1.34e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  44 CGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVP-LMLSNIFGAQKpISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15054  16 AGNSLLILLIFTQRSLRNTSNYFLVSLFMSDLMVGLVVMPpAMLNALYGRWV-LARDFCPIWYAFDVMCCSASILNLCVI 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLqltaLIFTLPFCGHDQEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15054  95 SLDRYLLIISPLRYKLRMTPPRALALILAAWTLAALASF----LPIELGWHELGHERTLPNLTSGTVEGQCRLLVSLPYA 170
                       170       180
                ....*....|....*....|....
gi 22128953 203 VlyVVGILVLTVPFLLICISYVFI 226
Cdd:cd15054 171 L--VASCLTFFLPSGAICFTYCRI 192
7tmA_capaR cd15134
neuropeptide capa receptor and similar invertebrate proteins, member of the class A family of ...
45-241 1.40e-06

neuropeptide capa receptor and similar invertebrate proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; CapaR is a G-protein coupled receptor for the Drosophila melanogaster capa neuropeptides (Drm-capa-1 and -2), which act on the Malpighian tubules to increase fluid transport. The capa peptides are evolutionarily related to vertebrate Neuromedin U neuropeptide and contain a C-terminal FPRXamide motif. CapaR regulates fluid homeostasis through its ligands, thereby acts as a desiccation stress-responsive receptor. CapaR undergoes desensitization, with internalization mediated by beta-arrestin-2.


Pssm-ID: 320262 [Multi-domain]  Cd Length: 298  Bit Score: 48.87  E-value: 1.40e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFgAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMAY 124
Cdd:cd15134  17 GNLCTCIVIARNRSMHTATNYYLFSLAVSDLLLLILGLPFELYTIW-QQYPWVFGEVFCKLRAFLSEMSSYASVLTITAF 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 125 --DRYVAICHPLHYSLIMTKKLCVQMVMGSWslalflslqLTALIFTLPFCGHDQeINHFLCDVPPVLRLA----CA--D 196
Cdd:cd15134  96 svERYLAICHPLRSHTMSKLSRAIRIIIAIW---------IIAFVCALPFAIQTR-IVYLEYPPTSGEALEesafCAmlN 165
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*.
gi 22128953 197 IHVHQAVLYVV-GILVLTVPFLLICISYVFIASTILRMRSAEGRQR 241
Cdd:cd15134 166 EIPPITPVFQLsTFLFFIIPMIAIIVLYVLIGLQLRRSTLLRRGQR 211
7tmA_5-HT1_5_7 cd15064
serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G ...
45-161 1.55e-06

serotonin receptor subtypes 1, 5 and 7, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes serotonin receptor subtypes 1, 5, and 7 that are activated by the neurotransmitter serotonin. The 5-HT1 and 5-HT5 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family. The 5-HT1 receptor subfamily includes 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as 5-HT2C receptor. The 5-HT5A and 5-HT5B receptors have been cloned from rat and mouse, but only the 5-HT5A isoform has been identified in human because of the presence of premature stop codons in the human 5-HT5B gene, which prevents a functional receptor from being expressed. The 5-HT7 receptor is coupled to Gs, which positively stimulates adenylate cyclase activity, leading to increased intracellular cAMP formation and calcium influx. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320192 [Multi-domain]  Cd Length: 258  Bit Score: 48.48  E-value: 1.55e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMAY 124
Cdd:cd15064  17 GNALVIAAILLTRKLHTPANYLIASLAVADLLVAVLVMPLSAVYELTGRWILGQVLCDIWISLDVTCCTASILHLCVIAL 96
                        90       100       110
                ....*....|....*....|....*....|....*..
gi 22128953 125 DRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15064  97 DRYWAITDAVEYAHKRTPKRAAVMIALVWTLSICISL 133
7tmA_Ap5-HTB1-like cd15065
serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of ...
41-160 1.55e-06

serotonin receptor subtypes B1 and B2 from Aplysia californica and similar proteins; member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes Aplysia californica serotonin receptors Ap5-HTB1 and Ap5-HTB2, and similar proteins from bilateria including insects, mollusks, annelids, and worms. Ap5-HTB1 is one of the several different receptors for 5-hydroxytryptamine (5HT, serotonin). In Aplysia, serotonin plays important roles in a variety of behavioral and physiological processes mediated by the central nervous system. These include circadian clock, feeding, locomotor movement, cognition and memory, synaptic growth and synaptic plasticity. Both Ap5-HTB1 and Ap5-HTB2 receptors are coupled to G-proteins that stimulate phospholipase C, leading to the activation of phosphoinositide metabolism. Ap5-HTB1 is expressed in the reproductive system, whereas Ap5-HTB2 is expressed in the central nervous system.


Pssm-ID: 320193 [Multi-domain]  Cd Length: 300  Bit Score: 48.89  E-value: 1.55e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSN------IFGAQKpislagCGTQMFFFVTLGST 114
Cdd:cd15065  12 LAIFGNVLVCLAIFTDRRLRKKSNLFIVSLAVADLLVALLVMTFAVVNdllgywLFGETF------CNIWISFDVMCSTA 85
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
gi 22128953 115 DCFLLAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLS 160
Cdd:cd15065  86 SILNLCAISLDRYIHIKKPLKYERWMTTRRALVVIASVWILSALIS 131
7tmA_5-HT1F cd15334
serotonin receptor subtype 1F, member of the class A family of seven-transmembrane G ...
46-307 1.56e-06

serotonin receptor subtype 1F, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT1 receptors, one of 14 mammalian 5-HT receptors, is a member of the class A of GPCRs and is activated by the endogenous neurotransmitter and peripheral signal mediator serotonin (5-hydroxytryptamine, 5-HT). The 5-HT1 receptors mediate inhibitory neurotransmission by coupling to G proteins of the G(i/o) family, which lead to a decrease in adenylate cyclase activity, thereby decreasing intracellular cAMP levels and calcium influx. The 5-HT1 receptor subfamily includes 5 subtypes: 5-HT1A, 5-HT1B, 5-HT1D, 5-HT1E, and 5-HT1F. There is no 5-HT1C receptor subtype, as it has been reclassified as the 5-HT2C receptor. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320456 [Multi-domain]  Cd Length: 259  Bit Score: 48.41  E-value: 1.56e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  46 NAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMAYD 125
Cdd:cd15334  18 NSLVITAIIVTRKLHHPANYLICSLAVTDFLVAVLVMPFSIMYIVKETWIMGQVVCDIWLSVDITCCTCSILHLSAIALD 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 126 RYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLqlTALIFTLPFCGHDQEinhflcdvppvlrlaCADIHVHQAVLY 205
Cdd:cd15334  98 RYRAITDAVEYARKRTPKHAGIMIAVVWIISIFISM--PPLFWRHQTTSREDE---------------CIIKHDHIVFTI 160
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 206 VVGILVLTVPFLLICISYVFIASTILRMRSAEGRQR----AFSTCSSHLTVVLLQYGCCSLVYlrprssTSEDEDRQIAL 281
Cdd:cd15334 161 YSTFGAFYIPLALILILYYKIYRAATRERKAATTLGlilgAFVICWLPFFVKEVIVNTCDSCY------ISEEMSNFLTW 234
                       250       260
                ....*....|....*....|....*.
gi 22128953 282 VyTFVTPLLNPLIYTLRNKDVKGALK 307
Cdd:cd15334 235 L-GYINSLINPLIYTIFNEDFKKAFQ 259
7tmA_photoreceptors_insect cd15079
insect photoreceptors R1-R6 and similar proteins, member of the class A family of ...
43-161 1.66e-06

insect photoreceptors R1-R6 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the insect photoreceptors and their closely related proteins. The Drosophila eye is composed of about 800 unit eyes called ommatidia, each of which contains eight photoreceptor cells (R1-R8). The six outer photoreceptors (R1-R6) function like the vertebrate rods and are responsible for motion detection in dim light and image formation. The R1-R6 photoreceptors express a blue-absorbing pigment, Rhodopsin 1(Rh1). The inner photoreceptors (R7 and R8) are considered the equivalent of the color-sensitive vertebrate cone cells, which express a range of different pigments. The R7 photoreceptors express one of two different UV absorbing pigments, either Rh3 or Rh4. Likewise, the R8 photoreceptors express either the blue absorbing pigment Rh5 or green absorbing pigment Rh6. These photoreceptors belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320207 [Multi-domain]  Cd Length: 292  Bit Score: 48.73  E-value: 1.66e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTdVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15079  15 LLGNGLVIYIFSTTKSLRTPSNMLVVNLAISDFLMMI-KMPIFIYNSFYEGWALGPLGCQIYAFLGSLSGIGSIWTNAAI 93
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 22128953 123 AYDRYVAICHPLHySLIMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15079  94 AYDRYNVIVKPLN-GNPLTRGKALLLILFIWLYALPWAL 131
7tmA_GPR6 cd15962
G protein-coupled receptor 6, member of the class A family of seven-transmembrane G ...
41-306 1.91e-06

G protein-coupled receptor 6, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR3, GPR6, and GPR12 form a subfamily of constitutively active G-protein coupled receptors with dual coupling to G(s) and G(i) proteins. These three orphan receptors are involved in the regulation of cell proliferation and survival, neurite outgrowth, cell clustering, and maintenance of meiotic prophase arrest. They constitutively activate adenylate cyclase to a similar degree as that seen with fully activated G(s)-coupled receptors, and are also able to constitutively activate inhibitory G(i/o) proteins. Lysophospholipids such as sphingosine 1-phosphate (S1P) and sphingosylphosphorylcholine have been detected as the high-affinity ligands for Gpr6 and Gpr12, respectively, which show high sequence homology with GPR3.


Pssm-ID: 320628 [Multi-domain]  Cd Length: 268  Bit Score: 48.39  E-value: 1.91e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGtqmFFFVTLGSTDCFLLA 120
Cdd:cd15962  13 VIACENAIVVAIIFYTPTLRTPMFVLIGSLATADLLAGCGLILNFVFQYVIQSETISLITVG---FLVASFTASVSSLLA 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAyDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLqltaliftLPFCGHDQEINHFLCDVppVLRLACADIHVH 200
Cdd:cd15962  90 ITV-DRYLSLYNALTYYSEKTVLGVHLMLAATWGVSLCLGL--------LPVLGWNCLEERASCSI--VRPLTKSNVTLL 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVpfllicisYVFIASTILRMRSAEGRQRAFSTCS---------SHLTVVLLQYGCCSLvylrPRSST 271
Cdd:cd15962 159 SASFFFIFILMLHL--------YIKICKIVCRHAHQIALQQHFLTAShyvatkkgvSTLAIILGTFGASWL----PFAIY 226
                       250       260       270       280
                ....*....|....*....|....*....|....*....|..
gi 22128953 272 SEDEDRQIALVYTFVTPL-------LNPLIYTLRNKDVKGAL 306
Cdd:cd15962 227 CVVGDHEYPAVYTYATLLpatynsmINPIIYAYRNQEIQRSM 268
7tmA_FMRFamide_R-like cd14978
FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of ...
43-244 2.54e-06

FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila melanogaster G-protein coupled FMRFamide (Phe-Met-Arg-Phe-NH2) receptor DrmFMRFa-R and related invertebrate receptors, as well as the vertebrate proteins GPR139 and GPR142. DrmFMRFa-R binds with high affinity to FMRFamide and intrinsic FMRFamide-related peptides. FMRFamide is a neuropeptide from the family of FMRFamide-related peptides (FaRPs), which all containing a C-terminal RFamide (Arg-Phe-NH2) motif and have diverse functions in the central and peripheral nervous systems. FMRFamide is an important neuropeptide in many types of invertebrates such as insects, nematodes, molluscs, and worms. In invertebrates, the FMRFamide-related peptides are involved in the regulation of heart rate, blood pressure, gut motility, feeding behavior, and reproduction. On the other hand, in vertebrates such as mice, they play a role in the modulation of morphine-induced antinociception. Orphan receptors GPR139 and GPR142 are very closely related G protein-coupled receptors, but they have different expression patterns in the brain and in other tissues. These receptors couple to inhibitory G proteins and activate phospholipase C. Studies suggested that dimer formation may be required for their proper function. GPR142 is predominantly expressed in pancreatic beta-cells and mediates enhancement of glucose-stimulated insulin secretion, whereas GPR139 is mostly expressed in the brain and is suggested to play a role in the control of locomotor activity. Tryptophan and phenylalanine have been identified as putative endogenous ligands of GPR139.


Pssm-ID: 410630 [Multi-domain]  Cd Length: 299  Bit Score: 48.01  E-value: 2.54e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVcTHSALHTPMYFFLSSLSVLEIFY-TTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLG----STDCF 117
Cdd:cd14978  15 IIGNILNLVVL-TRKSMRSSTNVYLAALAVSDILVlLSALPLFLLPYIADYSSSFLSYFYAYFLPYIYPLAntfqTASVW 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 118 LLAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQlTALIFTLPFCGHDQEINHFLCDVPPVLRLACADI 197
Cdd:cd14978  94 LTVALTVERYIAVCHPLKARTWCTPRRARRVILIIIIFSLLLNLP-RFFEYEVVECENCNNNSYYYVIPTLLRQNETYLL 172
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*..
gi 22128953 198 HVHqavLYVVGILVLTVPFLLICIsyvFIASTILRMRSAEGRQRAFS 244
Cdd:cd14978 173 KYY---FWLYAIFVVLLPFILLLI---LNILLIRALRKSKKRRRLLR 213
7tmA_alpha1A_AR cd15325
alpha-1 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G ...
45-161 2.88e-06

alpha-1 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320448 [Multi-domain]  Cd Length: 261  Bit Score: 47.97  E-value: 2.88e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLmlSNIFGAQKPISLAG--CGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15325  17 GNILVILSVACHRHLQTVTHYFIVNLAVADLLLTSTVLPF--SAIFEILGYWAFGRvfCNIWAAVDVLCCTASIMSLCII 94
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15325  95 SIDRYIGVSYPLRYPSIMTERRGLLALLCVWVLSLVISI 133
7tmA_Melanopsin-like cd15083
vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane ...
43-236 2.99e-06

vertebrate melanopsins and related opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group represent the Gq-coupled rhodopsin subfamily consists of melanopsins, insect photoreceptors R1-R6, invertebrate Gq opsins as well as their closely related opsins. Melanopsins (also called Opsin-4) are the primary photoreceptor molecules for non-visual functions such as the photo-entrainment of the circadian rhythm and pupillary constriction in mammals. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. The outer photoreceptors (R1-R6) are the insect Drosophila equivalent to the vertebrate rods and are responsible for image formation and motion detection. The invertebrate G(q) opsins includes the arthropod and mollusk visual opsins as well as invertebrate melanopsins, which are also found in vertebrates. Arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. Members of this subfamily belong to the class A of the G protein-coupled receptors and have seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320211 [Multi-domain]  Cd Length: 291  Bit Score: 48.10  E-value: 2.99e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGC-----GTQMFFFVTLGStdcf 117
Cdd:cd15083  15 VVGNGLVIYAFCRFKSLRTPANYLIINLAISDFLMCILNCPLMVISSFSGRWIFGKTGCdmygfSGGLFGIMSINT---- 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 118 lLAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQltaliftlPFCGHDQEinhflcdVPPVLRLAC--- 194
Cdd:cd15083  91 -LAAIAVDRYLVITRPMKASVRISHRRALIVIAVVWLYSLLWVLP--------PLFGWSRY-------VLEGLLTSCsfd 154
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....
gi 22128953 195 --ADIHVHQAVLYVVGILVLTVPFLLICISYVFIASTILRMRSA 236
Cdd:cd15083 155 ylSRDDANRSYVICLLIFGFVLPLLIIIYCYSFIFRAVRRHEKA 198
7tmA_TAAR2_3_4 cd15312
trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family ...
41-160 3.26e-06

trace amine-associated receptors 2, 3, 4, and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; TAAR2, TAAR3, and TAAR4 are among the 15 identified trace amine-associated receptor subtypes, which form a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320437 [Multi-domain]  Cd Length: 289  Bit Score: 47.73  E-value: 3.26e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPL-MLSNI-----FGaqkpisLAGCGTQMFFFVTLGST 114
Cdd:cd15312  13 LTVFGNLMVIISISHFKQLHSPTNFLILSLAITDFLLGFLVMPYsMVRSVescwyFG------DLFCKIHSSLDMMLSTT 86
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*.
gi 22128953 115 DCFLLAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLS 160
Cdd:cd15312  87 SIFHLCFIAVDRYYAVCDPLHYRTKITTPVIKVFLVISWSVPCLFA 132
7tmA_D4_dopamine_R cd15308
D4 dopamine receptor of the D2-like family, member of the class A family of ...
41-137 3.28e-06

D4 dopamine receptor of the D2-like family, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. Activation of D2-like family receptors is linked to G proteins of the G(i) family. This leads to a decrease in adenylate cyclase activity, thereby decreasing cAMP levels. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320434 [Multi-domain]  Cd Length: 258  Bit Score: 47.52  E-value: 3.28e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLML-SNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLL 119
Cdd:cd15308  13 AIIAGNVLVCLSVCTERALKTTTNYFIVSLAVADLLLALLVLPLYVySEFQGGVWTLSPVLCDALMTMDVMLCTASIFNL 92
                        90
                ....*....|....*...
gi 22128953 120 AVMAYDRYVAICHPLHYS 137
Cdd:cd15308  93 CAISVDRFIAVSVPLNYN 110
7tmA_5-HT2C cd15305
serotonin receptor subtype 2C, member of the class A family of seven-transmembrane G ...
41-310 3.49e-06

serotonin receptor subtype 2C, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341346 [Multi-domain]  Cd Length: 275  Bit Score: 47.59  E-value: 3.49e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNI-FGAQKPISLAGCGTQMFFFVTLGSTDCFLL 119
Cdd:cd15305  13 LTIGGNILVIMAVSLEKKLQNATNFFLMSLAVADMLVGILVMPVSLIAIlYDYAWPLPRYLCPIWISLDVLFSTASIMHL 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 120 AVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLqltalifTLPFCGhdqeinhfLCDVPPVLRLACADIHV 199
Cdd:cd15305  93 CAISLDRYVAIRNPIEHSRFNSRTKAMMKIAAVWTISIGISM-------PIPVIG--------LQDDEKVFVNGTCVLND 157
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 200 HQAVLyVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQ---YGCCSLVYLRPRSSTSEDED 276
Cdd:cd15305 158 ENFVL-IGSFVAFFIPLIIMVITYCLTIQVLQRQQAINNERRASKVLGIVFFLFLIMwcpFFITNILSVLCKEACDQKLM 236
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 22128953 277 RQIALVYT---FVTPLLNPLIYTLRNKDVKGALKNSI 310
Cdd:cd15305 237 EELLNVFVwvgYVSSGINPLVYTLFNKTYRRAFSNYI 273
7tmA_GPR153_GPR162-like cd14998
orphan G protein-coupled receptors 153 and 162, member of the class A family of ...
43-176 4.68e-06

orphan G protein-coupled receptors 153 and 162, member of the class A family of seven-transmembrane G protein-coupled receptors; This group contains the G-protein coupled receptor 153 (GPR153), GPR162, and similar proteins. These are orphan GCPRs with unknown endogenous ligand and function. GPR153 and GPR163 are widely expressed in the central nervous system (CNS) and share a common evolutionary ancestor due to a gene duplication event. Although categorized as members of the rhodopsin-like class A GPCRs, both GPR162 and GPR153 contain an HRM-motif instead of the highly conserved Asp-Arg-Tyr (DRY) motif found in the third transmembrane helix (TM3) of class A receptors which is important for efficient G protein-coupled signal transduction. Moreover, the LPxF motif, a variant of NPxxY motif that plays a crucial role during receptor activation, is found at the end of TM7 in both GPR162 and GPR153. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320129  Cd Length: 301  Bit Score: 47.24  E-value: 4.68e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTdvVPLMLSNIFGAQKPIS-----LAGCGTQMFFFVTLGSTDCF 117
Cdd:cd14998  15 LLANAWGILSISAKQQKHKPLELLLCFLAGTHMLMVA--VPLTTYSVVQLRRQASdydwnEGLCKVFVSTFYTLTLATCF 92
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 118 LLAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSlqltalifTLPFCG-HD 176
Cdd:cd14998  93 TVTSLSYHRMWMVRWPVNYRLSNAKKQALHAVMGIWMVSFILS--------TLPSIGwHD 144
7tmA_TACR cd15390
neurokinin receptors (or tachykinin receptors), member of the class A family of ...
45-161 6.77e-06

neurokinin receptors (or tachykinin receptors), member of the class A family of seven-transmembrane G protein-coupled receptors; This group represents G-protein coupled receptors for a variety of neuropeptides of the tachykinin (TK) family. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320512 [Multi-domain]  Cd Length: 289  Bit Score: 46.90  E-value: 6.77e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMAY 124
Cdd:cd15390  17 GNLIVIWIVLAHKRMRTVTNYFLVNLAVADLLISAFNTVFNFTYLLYNDWPFGLFYCKFSNFVAITTVAASVFTLMAISI 96
                        90       100       110
                ....*....|....*....|....*....|....*..
gi 22128953 125 DRYVAICHPLHYSliMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15390  97 DRYIAIVHPLRPR--LSRRTTKIAIAVIWLASFLLAL 131
7tmA_DmOct-betaAR-like cd15066
Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar ...
43-160 7.88e-06

Drosophila melanogaster beta-adrenergic receptor-like octopamine receptors and similar receptors in bilateria; member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes Drosophila beta-adrenergic-like octopamine receptors and similar proteins. The biogenic amine octopamine is the invertebrate equivalent of vertebrate adrenergic neurotransmitters and exerts its effects through different G protein-coupled receptor types. Insect octopamine receptors are involved in the modulation of carbohydrate metabolism, muscular tension, cognition and memory. The activation of octopamine receptors mediating these actions leads to an increase in adenylate cyclase activity, thereby increasing cAMP levels. In Drosophila melanogaster, three subgroups have been classified on the basis of their structural homology and functional equivalents with vertebrate beta-adrenergic receptors: DmOctBeta1R, DmOctBeta2R, and DmOctBeta3R.


Pssm-ID: 320194 [Multi-domain]  Cd Length: 265  Bit Score: 46.60  E-value: 7.88e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15066  14 IFGNLLVIISVMRHRKLRVITNYFVVSLAMADMLVALCAMTFNASVEITGRWMFGYFMCDVWNSLDVYFSTASILHLCCI 93
                        90       100       110
                ....*....|....*....|....*....|....*...
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLS 160
Cdd:cd15066  94 SVDRYYAIVQPLEYPSKMTKRRVAIMLANVWISPALIS 131
7tmA_SREB3_GPR173 cd15217
super conserved receptor expressed in brain 3 (or GPR173), member of the class A family of ...
43-161 8.05e-06

super conserved receptor expressed in brain 3 (or GPR173), member of the class A family of seven-transmembrane G protein-coupled receptors; The SREB (super conserved receptor expressed in brain) subfamily consists of at least three members, named SREB1 (GPR27), SREB2 (GPR85), and SREB3 (GPR173). They are very highly conserved G protein-coupled receptors throughout vertebrate evolution, however no endogenous ligands have yet been identified. SREB2 is greatly expressed in brain regions involved in psychiatric disorders and cognition, such as the hippocampal dentate gyrus. Genetic studies in both humans and mice have shown that SREB2 influences brain size and negatively regulates hippocampal adult neurogenesis and neurogenesis-dependent cognitive function, all of which are suggesting a potential link between SREB2 and schizophrenia. All three SREB genes are highly expressed in differentiated hippocampal neural stem cells. Furthermore, all GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320345 [Multi-domain]  Cd Length: 329  Bit Score: 46.87  E-value: 8.05e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNI-FGAQKPISLAGCGTQMFFFVTLGSTDCFLLAV 121
Cdd:cd15217  15 LAGNLIVSLLVLKDRALHKAPYYFLLDLCLADTIRSAVCFPFVLVSIrNGSAWTYSVLSCKIVAFMAVLFCFHAAFMLFC 94
                        90       100       110       120
                ....*....|....*....|....*....|....*....|
gi 22128953 122 MAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15217  95 ISVTRYMAIAHHRFYSKRMTFWTCIAVICMVWTLSVAMAF 134
7tmA_TAAR1 cd15314
trace amine-associated receptor 1 and similar receptors, member of the class A family of ...
41-156 8.40e-06

trace amine-associated receptor 1 and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptor 1 (TAAR1) is one of the 15 identified trace amine-associated receptor subtypes, which form a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. TAAR1 is coupled to the Gs protein, which leads to activation of adenylate cyclase, and is thought to play functional role in the regulation of brain monoamines. TAAR1 is also shown to be activated by psychoactive compounds such as Ecstasy (MDMA), amphetamine and LSD. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320438 [Multi-domain]  Cd Length: 282  Bit Score: 46.47  E-value: 8.40e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLmlSNIFGAQKPISLAG--CGTQMFFFVTLGSTDCFL 118
Cdd:cd15314  13 VTVCGNLLVIISIAHFKQLHTPTNYLILSLAVADLLVGGLVMPP--SMVRSVETCWYFGDlfCKIHSSFDITLCTASILN 90
                        90       100       110
                ....*....|....*....|....*....|....*...
gi 22128953 119 LAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLA 156
Cdd:cd15314  91 LCFISIDRYYAVCQPLLYRSKITVRVVLVMILISWSVS 128
7tmA_GPRnna14-like cd15001
GPRnna14 and related proteins, member of the class A family of seven-transmembrane G ...
43-160 8.57e-06

GPRnna14 and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the orphan G-protein coupled receptor GPRnna14 found in body louse (Pediculus humanus humanus) as well as its closely related proteins of unknown function. These receptors are members of the class A rhodopsin-like G-protein coupled receptors. As an obligatory parasite of humans, the body louse is an important vector for human diseases, including epidemic typhus, relapsing fever, and trench fever. GPRnna14 shares significant sequence similarity with the members of the neurotensin receptor family. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320132 [Multi-domain]  Cd Length: 266  Bit Score: 46.50  E-value: 8.57e-06
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15001  14 LIGNSLVIFVVARFRRMRSVTNVFLASLATADLLLLVFCVPLKTAEYFSPTWSLGAFLCKAVAYLQLLSFICSVLTLTAI 93
                        90       100       110
                ....*....|....*....|....*....|....*...
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLS 160
Cdd:cd15001  94 SIERYYVILHPMKAKSFCTIGRARKVALLIWILSAILA 131
7tmA_Histamine_H1R cd15050
histamine subtype H1 receptor, member of the class A family of seven-transmembrane G ...
45-305 1.16e-05

histamine subtype H1 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes histamine receptor subtype H1R, a member of histamine receptor family, which belongs to the class A of GPCRs. Histamine plays a key role as chemical mediator and neurotransmitter in various physiological and pathophysiological processes in the central and peripheral nervous system. Histamine exerts its functions by binding to four different G protein-coupled receptors (H1-H4). H1R selectively interacts with the G(q)-type G protein that activates phospholipase C and the phosphatidylinositol pathway. Antihistamines, a widely used anti-allergy medication, act on the H1 subtype and produce drowsiness as a side effect. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320178 [Multi-domain]  Cd Length: 263  Bit Score: 45.88  E-value: 1.16e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMAY 124
Cdd:cd15050  17 LNLLVLYAVRTERKLHTVGNLYIVSLSVADLIVGAVVMPLNIVYLLESKWILGRPVCLFWLSMDYVASTASIFSLFILCI 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 125 DRYVAICHPLHYSLIMTKKLCVQMVMGSWSLalflslqltALIFTLPFCGHdqeiNHFLCDVPPVLRLACADIHVHQAVL 204
Cdd:cd15050  97 DRYRSVQQPLKYLKYRTKTRASLMISGAWLL---------SFLWVIPILGW----HHFARGGERVVLEDKCETDFHDVTW 163
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 205 YVV--GILVLTVPFLLICISYVFIASTILRMRSAeGRQ-----RAFSTCSSHLTVVLLQYGCCslvylrprsSTSEDEDR 277
Cdd:cd15050 164 FKVltAILNFYIPSLLMLWFYAKIFKAVNRERKA-AKQlgfimAAFILCWIPYFILFMVIAFC---------KNCCNENL 233
                       250       260
                ....*....|....*....|....*....
gi 22128953 278 QIALVYT-FVTPLLNPLIYTLRNKDVKGA 305
Cdd:cd15050 234 HMFTIWLgYINSTLNPFIYPLCNENFKKT 262
7tmA_5-HT2A cd15304
serotonin receptor subtype 2A, member of the class A family of seven-transmembrane G ...
41-161 1.59e-05

serotonin receptor subtype 2A, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341345 [Multi-domain]  Cd Length: 267  Bit Score: 45.69  E-value: 1.59e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPL-MLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLL 119
Cdd:cd15304  13 LTIAGNILVIMAVSLEKKLQNATNYFLMSLAIADMLLGFLVMPVsMLTILYGYRWPLPSKLCAVWIYLDVLFSTASIMHL 92
                        90       100       110       120
                ....*....|....*....|....*....|....*....|..
gi 22128953 120 AVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15304  93 CAISLDRYIAIRNPIHHSRFNSRTKAFLKIIAVWTISVGISM 134
7tmA_Prostanoid_R cd14981
G protein-coupled receptors for prostanoids, member of the class A family of ...
45-242 1.64e-05

G protein-coupled receptors for prostanoids, member of the class A family of seven-transmembrane G protein-coupled receptors; Prostanoids are the cyclooxygenase (COX) metabolites of arachidonic acid, which include the prostaglandins (PGD2, PGE2, PGF2alpha), prostacyclin (PGI2), and thromboxane A2 (TxA2). These five major bioactive prostanoids acts as mediators or modulators in a wide range of physiological and pathophysiological processes within the kidney and play important roles in inflammation, platelet aggregation, and vasoconstriction/relaxation, among many others. They act locally by preferentially interacting with G protein-coupled receptors designated DP, EP. FP, IP, and TP, respectively. The phylogenetic tree suggests that the prostanoid receptors can be grouped into two major branches: G(s)-coupled (DP1, EP2, EP4, and IP) and G(i)- (EP3) or G(q)-coupled (EP1, FP, and TP), forming three clusters.


Pssm-ID: 320112 [Multi-domain]  Cd Length: 288  Bit Score: 45.70  E-value: 1.64e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALH--TPMYFFLSSLSV---LEIFYTTDVVPLMLSNIFGAQKPISLagCGTQMFFFVTLGSTDCFLL 119
Cdd:cd14981  17 GNLLALIVLARSSKSHkwSVFYRLVAGLAItdlLGILLTSPVVLAVYASNFEWDGGQPL--CDYFGFMMSFFGLSSLLIV 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 120 AVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLqltaliftLPFCGHDQEINHF---LCdvppVLRLACAD 196
Cdd:cd14981  95 CAMAVERFLAITHPFFYNSHVKKRRARLMLGAVWAFALLIAS--------LPLLGLGSYVLQYpgtWC----FLDFYSKN 162
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*...
gi 22128953 197 -IHVHQAVLY-VVGILVLTVPFLLICISYVfiasTILRMRSAEGRQRA 242
Cdd:cd14981 163 tGDAAYAYLYsILGLLILLVTLLCNLLVII----TLLRMRRRKKRHRR 206
7tmA_Galanin_R-like cd14971
galanin receptor and related proteins, member of the class A family of seven-transmembrane G ...
43-260 2.13e-05

galanin receptor and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes G-protein coupled galanin receptors, kisspeptin receptor and allatostatin-A receptor (AstA-R) in insects. These receptors, which are members of the class A of seven transmembrane GPCRs, share a high degree of sequence homology among themselves. The galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, eating disorders, and epilepsy, among many others. KiSS1-derived peptide receptor (also known as GPR54 or kisspeptin receptor) binds the peptide hormone kisspeptin (metastin), which encoded by the metastasis suppressor gene (KISS1) expressed in various endocrine and reproductive tissues. AstA-R is a G-protein coupled receptor that binds allatostatin A. Three distinct types of allatostatin have been identified in the insects and crustaceans: AstA, AstB, and AstC. They both inhibit the biosynthesis of juvenile hormone and exert an inhibitory influence on food intake. Therefore, allatostatins are considered as potential targets for insect control.


Pssm-ID: 320102 [Multi-domain]  Cd Length: 281  Bit Score: 45.15  E-value: 2.13e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd14971  15 LVGNSLVILVVARNKPMRSTTNLFILNLAVADLTFLLFCVPFTATIYPLPGWVFGDFMCKFVHYFQQVSMHASIFTLVAM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQEINHFLCDVPPVLRlacadihVHQA 202
Cdd:cd14971  95 SLDRFLAVVYPLRSLHIRTPRNALAASGCIWVVSLAVAAPVLALHRLRNYTPGNRTVCSEAWPSRAHRR-------AFAL 167
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 22128953 203 VLYVVGILvltVPFLLICISYV----FIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCC 260
Cdd:cd14971 168 CTFLFGYL---LPLLLICVCYAamlrHLWRVAVRPVLSEGSRRAKRKVTRLVLVVVVLFAAC 226
7tmA_Dop1R2-like cd15067
dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the ...
45-160 2.51e-05

dopamine 1-like receptor 2 from Drosophila melanogaster and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled dopamine 1-like receptor 2 is expressed in Drosophila heads and it shows significant sequence similarity with vertebrate and invertebrate dopamine receptors. Although the Drosophila Dop1R2 receptor does not cluster into the D1-like structural group, it does show pharmacological properties similar to D1-like receptors. As shown in vertebrate D1-like receptors, agonist stimulation of Dop1R2 activates adenylyl cyclase to increase cAMP levels and also generates a calcium signal through stimulation of phospholipase C.


Pssm-ID: 320195 [Multi-domain]  Cd Length: 262  Bit Score: 45.04  E-value: 2.51e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPL-MLSNIFGAQKPISLAGCGTQMFFFVtLGSTDCFL-LAVM 122
Cdd:cd15067  16 GNLLVILAVLRERYLRTVTNYFIVSLAVADLLVGSIVMPFsILHEMTGGYWLFGRDWCDVWHSFDV-LASTASILnLCVI 94
                        90       100       110
                ....*....|....*....|....*....|....*...
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLS 160
Cdd:cd15067  95 SLDRYWAITDPISYPSRMTKRRALIMIALVWICSALIS 132
7tmA_Vasopressin-like cd14986
vasopressin receptors and its related G protein-coupled receptors, member of the class A ...
43-248 2.76e-05

vasopressin receptors and its related G protein-coupled receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this group form a subfamily within the class A G-protein coupled receptors (GPCRs), which includes the vasopressin and oxytocin receptors, the gonadotropin-releasing hormone receptors (GnRHRs), the neuropeptide S receptor (NPSR), and orphan GPR150. These receptors share significant sequence homology with each other, suggesting that they have a common evolutionary origin. Vasopressin, also known as arginine vasopressin or anti-diuretic hormone, is a neuropeptide synthesized in the hypothalamus. The actions of vasopressin are mediated by the interaction of this hormone with three tissue-specific subtypes: V1AR, V1BR, and V2R. Although vasopressin differs from oxytocin by only two amino acids, they have divergent physiological functions. Vasopressin is involved in regulating osmotic and cardiovascular homeostasis, whereas oxytocin plays an important role in the uterus during childbirth and in lactation. GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR has also been associated with asthma and allergy. GPR150 is an orphan receptor closely related to the oxytocin and vasopressin receptors.


Pssm-ID: 320117 [Multi-domain]  Cd Length: 295  Bit Score: 45.06  E-value: 2.76e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYT-TDVVPLMLSNIFGAQkpisLAG---CGTQMFFFVTLGSTDCFL 118
Cdd:cd14986  15 LVGNGLVILVLRRKRKKRSRVNIFILNLAIADLVVAfFTVLTQIIWEATGEW----VAGdvlCRIVKYLQVVGLFASTYI 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 119 LAVMAYDRYVAICHPLhySLIMTKKLCVQMVMGSWSLALFLSLQlTALIFTLpfcghdQEINHFLCDvppvlrlaCADIH 198
Cdd:cd14986  91 LVSMSLDRYQAIVKPM--SSLKPRKRARLMIVVAWVLSFLFSIP-QLVIFVE------RELGDGVHQ--------CWSSF 153
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|....*
gi 22128953 199 VH----QAVLYVVGILVLTVPFLLICISYVFIASTI-LRMRSAEGRQRAFSTCSS 248
Cdd:cd14986 154 YTpwqrKVYITWLATYVFVIPLIILSYCYGRILRTIwIRSRQKTDRPIAPTAMSC 208
7tmA_Adenosine_R_A2A cd15068
adenosine receptor subtype A2A, member of the class A family of seven-transmembrane G ...
45-161 2.94e-05

adenosine receptor subtype A2A, member of the class A family of seven-transmembrane G protein-coupled receptors; The A2A receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand and is involved in regulating myocardial oxygen consumption and coronary blood flow. High-affinity A2A and low-affinity A2B receptors are preferentially coupled to G proteins of the stimulatory (Gs) family, which lead to activation of adenylate cyclase and thereby increasing the intracellular cAMP levels. The A2A receptor activation protects against tissue injury and acts as anti-inflammatory agent. In human skin endothelial cells, activation of A2B receptor, but not the A2A receptor, promotes angiogenesis. Alternatively, activated A2A receptor, but not the A2B receptor, promotes angiogenesis in human umbilical vein and lung microvascular endothelial cells. The A2A receptor alters cardiac contractility indirectly by modulating the anti-adrenergic effect of A1 receptor, while the A2B receptor exerts direct effects on cardiac contractile function, but does not modulate beta-adrenergic or A1 anti-adrenergic effects.


Pssm-ID: 320196 [Multi-domain]  Cd Length: 293  Bit Score: 44.93  E-value: 2.94e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVP--LMLSNIFGAqkpiSLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15068  17 GNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPfaITISTGFCA----ACHGCLFIACFVLVLTQSSIFSLLAI 92
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15068  93 AIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGL 131
7tmA_P2Y1-like cd15168
P2Y purinoceptors 1, 2, 4, 6, 11 and similar proteins, member of the class A family of ...
43-301 2.94e-05

P2Y purinoceptors 1, 2, 4, 6, 11 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; The P2Y receptor family is composed of eight subtypes, which are activated by naturally occurring extracellular nucleotides such as ATP, ADP, UTP, UDP, and UDP-glucose. These eight receptors are ubiquitous in human tissues and can be further classified into two subfamilies based on sequence homology and second messenger coupling: a subfamily of five P2Y1-like receptors (P2Y1, P2Y2, P2Y4, P2Y6, and P2Y11Rs) that are coupled to G(q) protein to activate phospholipase C (PLC) and a second subfamily of three P2Y12-like receptors (P2Y12, P2YR13, and P2Y14Rs) that are coupled to G(i) protein to inhibit adenylate cyclase. Several cloned subtypes, such as P2Y3, P2Y5, and P2Y7-10, are not functional mammalian nucleotide receptors. The native agonists for P2Y receptors are: ATP (P2Y2, P2Y12), ADP (P2Y1, P2Y12, and P2Y13), UTP (P2Y2, P2Y4), UDP (P2Y6, P2Y14), and UDP-glucose (P2Y14). This cluster only includes P2Y1-like receptors as well as other closely related orphan receptors, such as GPR91 (a succinate receptor) and GPR80/GPR99 (an alpha-ketoglutarate receptor).


Pssm-ID: 341329 [Multi-domain]  Cd Length: 284  Bit Score: 45.00  E-value: 2.94e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15168  15 LLLNSVVLYRFIFHLKPWNSSAIYMFNLAVSDLLYLLSLPFLIYYYANGDHWIFGDFMCKLVRFLFYFNLYGSILFLTCI 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTlpfcghdqeinhflcdVPPVLRLACADIHVHQA 202
Cdd:cd15168  95 SVHRYLGICHPLRSLGKLKKRHAVAISVAVWILVLLQLLPILFFATT----------------GRKNNRTTCYDTTSPEE 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 203 ----VLYVVGILVLT--VPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSL-------VYLRPRS 269
Cdd:cd15168 159 lndyVIYSMVLTGLGflLPLLIILACYGLIVRALIRKLGEGVTSALRRKSIRLVIIVLALFAVCFLpfhvtrtINLAARL 238
                       250       260       270       280
                ....*....|....*....|....*....|....*....|.
gi 22128953 270 STSEDEDR---QIALVYTFVTPL------LNPLIYTLRNKD 301
Cdd:cd15168 239 LSGTASCAtlnGIYVAYKVTRPLaslnscLNPLLYFLAGDK 279
7tmA_5-HT2_insect-like cd15307
serotonin receptor subtype 2 from insects, member of the class A family of seven-transmembrane ...
43-307 3.05e-05

serotonin receptor subtype 2 from insects, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320433 [Multi-domain]  Cd Length: 279  Bit Score: 44.94  E-value: 3.05e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15307  15 AAGNILVCLAIAWERRLQNVTNYFLMSLAITDLMVAVLVMPLGILTLVKGHFPLSSEHCLTWICLDVLFCTASIMHLCTI 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTlpfcGHDQEINHFLCDVP-PVLRLacadihvhq 201
Cdd:cd15307  95 SVDRYLSLRYPMRFGRNKTRRRVTLKIVFVWLLSIAMSLPLSLMYSK----DHASVLVNGTCQIPdPVYKL--------- 161
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 202 avlyVVGILVLTVPFLLICISYVFIASTILRMRSAEGR-----QRAFSTCSSHLTVVLLQYGCCSLVYLRPrSSTSEDED 276
Cdd:cd15307 162 ----VGSIVCFYIPLGVMLLTYCLTVRLLARQRSRHGRiirleQKATKVLGVVFFTFVILWSPFFVLNLLP-TVCAECEE 236
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 22128953 277 RQIALVYTFVT------PLLNPLIYTLRNKDVKGALK 307
Cdd:cd15307 237 RISHWVFDVVTwlgyasSMVNPIFYTIFNKVFRQAFK 273
7tmA_Opsin5_neuropsin cd15074
neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled ...
43-230 3.14e-05

neuropsin (Opsin-5), member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropsin, also known as Opsin-5, is a photoreceptor protein expressed in the retina, brain, testes, and spinal cord. Neuropsin belongs to the type 2 opsin family of the class A G-protein coupled receptors. Mammalian neuropsin activates Gi protein-mediated photo-transduction pathway in a UV-dependent manner, whereas, in non-mammalian vertebrates, neuropsin is involved in regulating the photoperiodic control of seasonal reproduction in birds such as quail. As with other opsins, it may also act as a retinal photoisomerase.


Pssm-ID: 320202 [Multi-domain]  Cd Length: 284  Bit Score: 44.57  E-value: 3.14e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15074  15 TLGNGTVLFVLYRRRSKLKPAELLTVNLAVSDLGISVFGYPLAIISAFAHRWLFGDIGCVFYGFCGFLFGCCSINTLTAI 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVqMVMGSWSLALFLSlqltalifTLPFCGHDQ---EINHFLCDVPPVLRLACADihv 199
Cdd:cd15074  95 SIYRYLKICHPPYGPKLSRRHVCI-VIVAIWLYALFWA--------VAPLVGWGSygpEPFGTSCSIDWTGASASVG--- 162
                       170       180       190
                ....*....|....*....|....*....|.
gi 22128953 200 HQAVLYVVGILVLTVPFLLICISYVFIASTI 230
Cdd:cd15074 163 GMSYIISIFIFCYLLPVLIIVFSYVKIIRKV 193
7tmA_alpha2_AR cd15059
alpha-2 adrenergic receptors, member of the class A family of seven-transmembrane G ...
41-161 3.22e-05

alpha-2 adrenergic receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320187 [Multi-domain]  Cd Length: 261  Bit Score: 44.64  E-value: 3.22e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15059  13 LIIVGNVLVIVAVLTSRKLRAPQNWFLVSLAVADILVGLLIMPFSLVNELMGYWYFGSVWCEIWLALDVLFCTASIVNLC 92
                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15059  93 AISLDRYWSVTQAVEYNLKRTPRRAKAMIAAVWIISAVISL 133
7tmA_D2-like_dopamine_R cd15053
D2-like dopamine receptors, member of the class A family of seven-transmembrane G ...
41-163 3.93e-05

D2-like dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. In contrast, activation of D2-like family receptors is linked to G proteins of the G(i) family, which inhibit adenylate cyclase. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320181 [Multi-domain]  Cd Length: 263  Bit Score: 44.26  E-value: 3.93e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLML-SNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLL 119
Cdd:cd15053  13 LTVFGNVLVIMSVFRERSLQTATNYFIVSLAVADLLVAILVMPFAVyVEVNGGKWYLGPILCDIYIAMDVMCSTASIFNL 92
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....
gi 22128953 120 AVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQL 163
Cdd:cd15053  93 CAISIDRYIAVTQPIKYARQKNSKRVLLTIAIVWVVSAAIACPL 136
7tmA_5-HT7 cd15329
serotonin receptor subtype 7, member of the class A family of seven-transmembrane G ...
41-161 4.39e-05

serotonin receptor subtype 7, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT7 receptor, one of 14 mammalian serotonin receptors, is a member of the class A of GPCRs and is activated by the neurotransmitter serotonin (5-hydroxytryptamine, 5-HT). 5-HT7 receptor mainly couples to Gs protein, which positively stimulates adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. 5-HT7 receptor is expressed in various human tissues, mainly in the brain, the lower gastrointestinal tract and in vital blood vessels including the coronary artery. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in neurologic disorders such as migraine, schizophrenia, and depression.


Pssm-ID: 320452 [Multi-domain]  Cd Length: 260  Bit Score: 44.18  E-value: 4.39e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15329  13 GTVVGNALVIIAVCLVKKLRTPSNYLIVSLAVSDLLVALLVMPLAIIYELSGYWPFGEILCDVWISFDVLLCTASILNLC 92
                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15329  93 AISVDRYLVITRPLTYAVKRTPKRMALMIAIVWLLSALISI 133
7tmA_Trissin_R cd15012
trissin receptor and related proteins, member of the class A family of seven-transmembrane G ...
45-306 4.77e-05

trissin receptor and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the Drosophila melanogaster trissin receptor and closely related invertebrate proteins which are a member of the class A family of seven-transmembrane G-protein coupled receptors. The cysteine-rich trissin has been shown to be an endogenous ligand for the orphan CG34381 in Drosophila melanogaster. Trissin is a peptide composed of 28 amino acids with three intrachain disulfide bonds with no significant structural similarities to known endogenous peptides. Cysteine-rich peptides are known to have antimicrobial or toxicant activities, although frequently their mechanism of action is poorly understood. Since the expression of trissin and its receptor is reported to predominantly localize to the brain and thoracicoabdominal ganglion, trissin is predicted to behave as a neuropeptide. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320140 [Multi-domain]  Cd Length: 277  Bit Score: 44.36  E-value: 4.77e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCgtQMFFFVTLGS--TDCFLLAVM 122
Cdd:cd15012  16 GNLLVILVVTSHRRMRTITNFFLANLAVADLCVGIFCVLQNLSIYLIPSWPFGEVLC--RMYQFVHSLSytASIGILVVI 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWslalflslqLTALIFTLPFCGHDQEINHFLCDVPPVLRLACADIHVHQA 202
Cdd:cd15012  94 SVERYIAILHPLRCKQLLTAARLRVTIVTVW---------LTSAVYNTPYFVFSQTVEILVTQDGQEEEICVLDREMFNS 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 203 VLY--VVGILVLTVPFLLICISYVFIASTILRMRSAEGRQRAFSTcsshLTVVLLQYGCCSLVY----LRPRSSTSEDED 276
Cdd:cd15012 165 KLYdtINFIVWYLIPLLIMTVLYSKISIVLWKSSSIEARRKVVRL----LVAVVVSFALCNLPYharkMWQYWSEPYRCD 240
                       250       260       270
                ....*....|....*....|....*....|....*..
gi 22128953 277 RQIALVYTFVTPLL-------NPLIYTLRNKDVKGAL 306
Cdd:cd15012 241 SNWNALLTPLTFLVlyfnsavNPLLYAFLSKRFRQSM 277
7tmA_GHSR-like cd15928
growth hormone secretagogue receptor, motilin receptor, and related proteins, member of the ...
43-306 5.67e-05

growth hormone secretagogue receptor, motilin receptor, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes growth hormone secretagogue receptor (GHSR or ghrelin receptor), motilin receptor (also called GPR38), and related proteins. Both GHSR and GPR38 bind peptide hormones. Ghrelin, the endogenous ligand for GHSR, is an acylated 28-amino acid peptide hormone produced by ghrelin cells in the gastrointestinal tract. Ghrelin is also called the hunger hormone and is involved in the regulation of growth hormone release, appetite and feeding, gut motility, lipid and glucose metabolism, and energy balance. Motilin, the ligand for GPR38, is a 22 amino acid peptide hormone expressed throughout the gastrointestinal tract and stimulates contraction of gut smooth muscle. It is involved in the regulation of digestive tract motility.


Pssm-ID: 320594 [Multi-domain]  Cd Length: 288  Bit Score: 44.02  E-value: 5.67e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFyTTDVVPLMLSNIFgAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15928  15 ASGNLLTVLVIGRSRDMRTTTNLYLSSLAVSDLL-IFLVLPLDLYRLW-RYRPWRFGDLLCRLMYFFSETCTYASILHIT 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AY--DRYVAICHPLHYSLIMTKKLCVQMVMGSWSLAlFLSLQLTALIFTLPFCGHDQEINHFLCDVPPVLRLACadihvh 200
Cdd:cd15928  93 ALsvERYLAICHPLRAKVLVTRGRVKLLIAVIWAVA-IVSAGPALVLVGVEHIQGQQTPRGFECTVVNVSSGLL------ 165
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 qAVLYVVGILVLTVPFLLICISYVFIASTI------LRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRS--STS 272
Cdd:cd15928 166 -SVMLWVSTSFFFVPMVCLSLLYGLIGRALwdrrqrSRTAGASRRDNNHRQTVRMLAVIVLAFVLCWLPFHVGRVifNHS 244
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....
gi 22128953 273 EDEDRQIALVYTFVTPL----------LNPLIYTLRNKDVKGAL 306
Cdd:cd15928 245 RASTKHLHYVSQYFNLVsfvlfylsaaINPILYNLMSKRYRYAV 288
7tmA_NMU-R1 cd15358
neuromedin U receptor subtype 1, member of the class A family of seven-transmembrane G ...
45-171 5.69e-05

neuromedin U receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuromedin U (NMU) is a highly conserved neuropeptide with a common C-terminal heptapeptide sequence (FLFRPRN-amide) found at the highest levels in the gastrointestinal tract and pituitary gland of mammals. Disruption or replacement of residues in the conserved heptapeptide region can result in the reduced ability of NMU to stimulate smooth-muscle contraction. Two G-protein coupled receptor subtypes, NMU-R1 and NMU-R2, with a distinct expression pattern, have been identified to bind NMU. NMU-R1 is expressed primarily in the peripheral nervous system, while NMU-R2 is mainly found in the central nervous system. Neuromedin S, a 36 amino-acid neuropeptide that shares a conserved C-terminal heptapeptide sequence with NMU, is a highly potent and selective NMU-R2 agonist. Pharmacological studies have shown that both NMU and NMS inhibit food intake and reduce body weight, and that NMU increases energy expenditure.


Pssm-ID: 320480 [Multi-domain]  Cd Length: 305  Bit Score: 43.99  E-value: 5.69e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPL----MLSN---IFGAqkpislAGCGTQMFFFVTLGSTDCF 117
Cdd:cd15358  17 GNGLTCIVILRHKVMRTPTNYYLFSLAVSDLLVLLLGMPLelyeMWSNypfLLGA------GGCYFKTLLFETVCFASIL 90
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*.
gi 22128953 118 LLAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTAL--IFTLP 171
Cdd:cd15358  91 NVTALSVERYIAVVHPLKAKYVVTRTHAKRVIGAVWVVSILCSIPNTSLhgIFQLT 146
7tmA_HCAR-like cd14991
hydroxycarboxylic acid receptors and related proteins, member of the class A family of ...
43-295 6.04e-05

hydroxycarboxylic acid receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes the hydroxycarboxylic acid receptors (HCARs) as well as their closely related receptors, GPR31 and oxoeicosanoid receptor 1 (OXER1). HCARs are members of the class A family of G-protein coupled receptors (GPCRs). HCAR subfamily contain three receptor subtypes: HCAR1, HCAR2, and HCAR3. The endogenous ligand of HCAR1 (also known as lactate receptor 1, GPR104, or GPR81) is L-lactic acid. The endogenous ligands of HCAR2 (also known as niacin receptor 1, GPR109A, nicotinic acid receptor) and HCAR3 (also known as niacin receptor 2, orGPR109B) are 3-hydroxybutyric acid and 3-hydroxyoctanoic acid, respectively. All three HCA receptors are expressed in adipocytes, and are coupled to G(i)-proteins mediating anti-lipolytic effects in fat cells. OXER1 is a receptor for eicosanoids and polyunsaturated fatty acids such as 5-oxo-6E,8Z,11Z,14Z-eicosatetraenoic acid (5-OXO-ETE), 5(S)-hydroperoxy-6E,8Z,11Z,14Z-eicosatetraenoic acid (5(S)-HPETE) and arachidonic acid, whereas GPR31 is a high-affinity receptor for 12-(S)-hydroxy-5,8,10,14-eicosatetraenoic acid (12-S-HETE).


Pssm-ID: 320122 [Multi-domain]  Cd Length: 280  Bit Score: 43.97  E-value: 6.04e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLsVLEIFYTTDVVPLMLSNIFGAQKPI-SLAGCGTQMFFFVTLGSTDCFLLAV 121
Cdd:cd14991  15 LPGNVVALWIFCFHSRTWKANTVYLFNL-VLADFLLLICLPFRIDYYLRGEHWIfGEAWCRVNLFMLSVNRSASIAFLTA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 122 MAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWslALFLSLQLTALIFTLPfcghDQEINHFLCDVPPVLRLACADIHVHQ 201
Cdd:cd14991  94 VALDRYFKVVHPHHRVNRMSVKAAAGVAGLLW--ALVLLLTLPLLLSTLL----TVNSNKSSCHSFSSYTKPSLSIRWHN 167
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 202 AVLyvvgILVLTVPFLLICISYVFIASTiLRMRSAEGRQRAFSTCSSHLTVVLLQYGCC----------SLVYLRPRSST 271
Cdd:cd14991 168 ALF----LLEFFLPLGLIVFCSVRIACN-LRIRQSLGKQARVQRAIRLVFLVVIVFVLCflpsiiagllALVFKNLGSCR 242
                       250       260
                ....*....|....*....|....*..
gi 22128953 272 SEDEDRQ---IALVYTFVTPLLNPLIY 295
Cdd:cd14991 243 CLNSVAQlfhISLAFTYLNSALDPVIY 269
7tmA_TAAR5 cd15318
trace amine-associated receptor 5, member of the class A family of seven-transmembrane G ...
41-155 6.48e-05

trace amine-associated receptor 5, member of the class A family of seven-transmembrane G protein-coupled receptors; The trace amine-associated receptor 5 is one of the 15 identified amine-activated G protein-coupled receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320441 [Multi-domain]  Cd Length: 282  Bit Score: 43.70  E-value: 6.48e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15318  13 IIVLGNLFVVVTVSHFKALHTPTNFLLLSLALADMLLGLTVLPFSTIRSVESCWYFGDSFCRLHTCLDTLFCLTSIFHLC 92
                        90       100       110
                ....*....|....*....|....*....|....*
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSL 155
Cdd:cd15318  93 FISIDRHCAICDPLLYPSKFTIRVACIFIAAGWLV 127
7tmA_P2Y6_P2Y3-like cd15968
P2Y purinoceptors 6 and 3, and similar proteins, member of the class A family of ...
46-232 6.82e-05

P2Y purinoceptors 6 and 3, and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes P2Y receptor 6 (P2Y6), P2Y3, and P2Y3-like proteins. These receptors belong to the G(i) class of a family of purinergic G-protein coupled receptors. In the CNS, P2Y6 plays a role in microglia activation and phagocytosis, and is involved in the secretion of interleukin from monocytes and macrophages in the immune system. The P2Y receptor family is composed of eight subtypes, which are activated by naturally occurring extracellular nucleotides such as ATP, ADP, UTP, UDP, and UDP-glucose. These eight receptors are ubiquitous in human tissues and can be further classified into two subfamilies based on sequence homology and second messenger coupling: a subfamily of five P2Y1-like receptors (P2Y1, P2Y2, P2Y4, P2Y6, and P2Y11Rs) that are coupled to G(q) protein to activate phospholipase C (PLC) and a second subfamily of three P2Y12-like receptors (P2Y12, P2YR13, and P2Y14Rs) that are coupled to G(i) protein to inhibit adenylate cyclase. Several cloned subtypes, such as P2Y3, P2Y5, and P2Y7-10, are not functional mammalian nucleotide receptors. The native agonists for P2Y receptors are: ATP (P2Y2, P2Y12), ADP (P2Y1, P2Y12, and P2Y13), UTP (P2Y2, P2Y4), UDP (P2Y6, P2Y14), and UDP-glucose (P2Y14).


Pssm-ID: 320634 [Multi-domain]  Cd Length: 285  Bit Score: 43.61  E-value: 6.82e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  46 NAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMAYD 125
Cdd:cd15968  18 NSVVLTRCCRHTKAWTRTAIYMVNLALADLLYALSLPLLIYNYAMRDRWLFGDFMCRLVRFLFYFNLYGSILFLTCISVH 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 126 RYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQltalifTLPFCGHDQEINHFLC--DVPPVLrlaCADIHVHQAV 203
Cdd:cd15968  98 RYLGICHPMRPWHKETRRAAWLTCVLVWILVFAQTLP------ILIFARTGIIRNRTVCydLAPPAL---FPHYVPYGMA 168
                       170       180
                ....*....|....*....|....*....
gi 22128953 204 LYVVGILvltVPFLLICISYVFIASTILR 232
Cdd:cd15968 169 LTVSGFL---LPFSIILWCYCLVVRTLCR 194
7tmA_GPR83 cd15389
G protein-coupled receptor 83, member of the class A family of seven-transmembrane G ...
43-161 7.07e-05

G protein-coupled receptor 83, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR83, also known as GPR72, is widely expressed in the brain, including hypothalamic nuclei which is involved in regulating energy balance and food intake. The hypothalamic expression of GPR83 is tightly regulated in response to nutrient availability and is decreased in obese mice. A recent study suggests that GPR83 has a critical role in the regulation of systemic energy metabolism via ghrelin-dependent and ghrelin-independent mechanisms. GPR83 shares a significant amino acid sequence identity with the tachykinin receptors, however its endogenous ligand is unknown.


Pssm-ID: 320511 [Multi-domain]  Cd Length: 285  Bit Score: 43.87  E-value: 7.07e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15389  15 LFGNSLVCHVIFKNKRMHTATNLFIVNLAVSDILITLLNTPFTLVRFVNSTWVFGKIMCHLSRFAQYCSVYVSTLTLTAI 94
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 22128953 123 AYDRYVAICHPLHYSliMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15389  95 ALDRHRVILHPLKPR--ITPCQGVVVIAIIWIMASCLSL 131
7tmA_Opsin_Gq_invertebrates cd15337
invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled ...
44-226 7.27e-05

invertebrate Gq opsins, member of the class A family of seven-transmembrane G protein-coupled receptors; The invertebrate Gq-coupled opsin subfamily includes the arthropod and mollusc visual opsins. Like the vertebrate visual opsins, arthropods possess color vision by the use of multiple opsins sensitive to different light wavelengths. The invertebrate Gq opsins are closely related to the vertebrate melanopsins, the primary photoreceptor molecules for non-visual responses to light, and the R1-R6 photoreceptors, which are the fly equivalent to the vertebrate rods. The Gq opsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320459 [Multi-domain]  Cd Length: 292  Bit Score: 43.85  E-value: 7.27e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  44 CGNAAIIWVVCTHSALHTPMYFFLSSLSVLE-IFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15337  16 IGNLLVIYLFSKTKSLRTPSNMFIINLAISDfGFSAVNGFPLKTISSFNKKWIWGKVACELYGFAGGIFGFMSITTLAAI 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLqltaliftLPFCGhdqeinhFLCDVPPVLRLACADIHVHQ- 201
Cdd:cd15337  96 SIDRYLVIAKPLEAMKKMTFKRAFIMIIIIWLWSLLWSI--------PPFFG-------WGRYVPEGFQTSCTFDYLSRd 160
                       170       180
                ....*....|....*....|....*....
gi 22128953 202 --AVLYVVGILVL--TVPFLLICISYVFI 226
Cdd:cd15337 161 lnNRLFILGLFIFgfLCPLLIIIFCYVNI 189
7tmA_P2Y3-like cd16001
P2Y purinoceptor 3-like proteins, member of the class A family of seven-transmembrane G ...
46-247 7.39e-05

P2Y purinoceptor 3-like proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; P2Y3-like proteins are an uncharacterized group that belongs to the G(i) class of a family of purinergic G-protein coupled receptors. The P2Y receptor family is composed of eight subtypes, which are activated by naturally occurring extracellular nucleotides such as ATP, ADP, UTP, UDP, and UDP-glucose. These eight receptors are ubiquitous in human tissues and can be further classified into two subfamilies based on sequence homology and second messenger coupling: a subfamily of five P2Y1-like receptors (P2Y1, P2Y2, P2Y4, P2Y6, and P2Y11Rs) that are coupled to G(q) protein to activate phospholipase C (PLC) and a second subfamily of three P2Y12-like receptors (P2Y12, P2YR13, and P2Y14Rs) that are coupled to G(i) protein to inhibit adenylate cyclase. Several cloned subtypes, such as P2Y3, P2Y5, and P2Y7-10, are not functional mammalian nucleotide receptors. The native agonists for P2Y receptors are: ATP (P2Y2, P2Y12), ADP (P2Y1, P2Y12, and P2Y13), UTP (P2Y2, P2Y4), UDP (P2Y6, P2Y14), and UDP-glucose (P2Y14).


Pssm-ID: 320667 [Multi-domain]  Cd Length: 284  Bit Score: 43.60  E-value: 7.39e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  46 NAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMAYD 125
Cdd:cd16001  18 NGTVLWLSWCRTKRWTCSTIYLVNLAVADLLYVCSLPLLIVNYAMRDRWPFGDFLCKLVRFLFYTNLYGSILFLTCISVH 97
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 126 RYVAICHPLHYSLIMTKKLCVQMVMGSWSLAlflslqLTALIFTLPFcGHDQEINHflcdvppvlRLACADI-------- 197
Cdd:cd16001  98 RFLGVCYPIRSLAYRTRRLAVIGSAATWILV------VLQLLPTLVY-ARTGSINN---------RTVCYDLtspdnfgn 161
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|.
gi 22128953 198 -HVHQAVLYVVGILvltVPFLLICISYVFIASTILRMRSAEGRQRAFSTCS 247
Cdd:cd16001 162 yFPYGMVLTVTGFL---IPFLIILLCYCLMIKSLIRSEEAAGVGKAARAKS 209
7tmA_ETH-R cd14997
ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G ...
45-241 8.33e-05

ecdysis-triggering hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the ecdysis-triggering hormone receptors found in insects, which are members of the class A family of seven-transmembrane G-protein coupled receptors. Ecdysis-triggering hormones are vital regulatory signals that govern the stereotypic physiological sequence leading to cuticle shedding in insects. Thus, the ETH signaling system has been a target for the design of more sophisticated insect-selective pest control strategies. Two subtypes of ecdysis-triggering hormone receptor were identified in Drosophila melanogaster. Blood-borne ecdysis-triggering hormone (ETH) activates the behavioral sequence through direct actions on the central nervous system. In insects, ecdysis is thought to be controlled by the interaction between peptide hormones; in particular between ecdysis-triggering hormone (ETH) from the periphery and eclosion hormone (EH) and crustacean cardioactive peptide (CCAP) from the central nervous system. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320128 [Multi-domain]  Cd Length: 294  Bit Score: 43.43  E-value: 8.33e-05
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFgAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMA- 123
Cdd:cd14997  17 GNVLVGIVVWKNKDMRTPTNIFLVNLSVADLLVLLVCMPVALVETW-AREPWLLGEFMCKLVPFVELTVAHASVLTILAi 95
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 124 -YDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLpfcghdqEINHFLCDVPPVLRlacADIHVHQA 202
Cdd:cd14997  96 sFERYYAICHPLQAKYVCTKRRALVIIALIWLLALLTSSPVLFITEFK-------EEDFNDGTPVAVCR---TPADTFWK 165
                       170       180       190       200
                ....*....|....*....|....*....|....*....|.
gi 22128953 203 VLYVVGILVL--TVPFLLICISYVFIASTILRMRSAEGRQR 241
Cdd:cd14997 166 VAYILSTIVVffVVPLAILSGLYSVICRRLVGHPALESRRA 206
7tmA_alpha2C_AR cd15323
alpha-2 adrenergic receptors subtype C, member of the class A family of seven-transmembrane G ...
43-161 1.07e-04

alpha-2 adrenergic receptors subtype C, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320446 [Multi-domain]  Cd Length: 261  Bit Score: 43.00  E-value: 1.07e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15323  15 IVGNVLVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMGYWYFGQVWCNIYLALDVLFCTSSIVHLCAI 94
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15323  95 SLDRYWSVTQAVEYNLKRTPRRVKAIIVTVWLISAVISF 133
7tmA_CCK-BR cd15979
cholecystokinin receptor type B, member of the class A family of seven-transmembrane G ...
41-239 1.09e-04

cholecystokinin receptor type B, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320645 [Multi-domain]  Cd Length: 275  Bit Score: 43.26  E-value: 1.09e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVP------LMLSNIFGAqkpislAGCGTQMFFFVTLGST 114
Cdd:cd15979  13 LSVFGNMLIIVVLGLNKRLRTVTNSFLLSLALSDLMLAVFCMPftlipnLMGTFIFGE------VICKAVAYLMGVSVSV 86
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 115 DCFLLAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQEINHfLCdvppvlRLAC 194
Cdd:cd15979  87 STFSLVAIAIERYSAICNPLQSRVWQTRSHAYRVIAATWLLSGLIMIPYPVYSVTVPVPVGDRPRGH-QC------RHAW 159
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*
gi 22128953 195 ADIHVHQAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGR 239
Cdd:cd15979 160 PSAQVRQAWYVLLLLILFFIPGVVMIVAYGLISRELYRGLLAKKR 204
7tmA_GPR153 cd15907
orphan G protein-coupled receptor 153, member of the class A family of seven-transmembrane G ...
108-176 1.26e-04

orphan G protein-coupled receptor 153, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the G-protein coupled receptor 153 (GPR153) with unknown endogenous ligand and function. GPR153 shares a common evolutionary origin with GPR162 and is highly expressed in central nervous system (CNS) including the thalamus, cerebellum, and the arcuate nucleus. Although categorized as a member of the rhodopsin-like class A GPCRs, GPR153 contains HRM-motif instead of the highly conserved Asp-Arg-Tyr (DRY) motif found in the third transmembrane helix (TM3) of class A receptors and important for efficient G protein-coupled signal transduction. Moreover, the LPxFL motif, a variant of NPxxY motif that plays a crucial role during receptor activation, is found at the end of TM7 in GPR153. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320573  Cd Length: 301  Bit Score: 43.01  E-value: 1.26e-04
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 108 FVTLGSTDCFLLAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSlqltalifTLPFCG-HD 176
Cdd:cd15907  83 FYTLTLVTCFSVTSLSYHRMWMVRWPVNYRLSNTKKQAVHTVMGIWMVSFILS--------TLPAVGwHD 144
7tmA_alpha1B_AR cd15326
alpha-1 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G ...
43-161 1.29e-04

alpha-1 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320449 [Multi-domain]  Cd Length: 261  Bit Score: 42.96  E-value: 1.29e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15326  15 IVGNILVILSVVCNRHLRIPTNYFIVNLAIADLLLSFTVLPFSATLEILGYWVFGRIFCDIWAAVDVLCCTASILSLCAI 94
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15326  95 SIDRYIGVRHSLQYPTIVTRKRAILALLGVWVLSTVISI 133
7tmA_alpha2B_AR cd15321
alpha-2 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G ...
25-161 1.76e-04

alpha-2 adrenergic receptors subtype B, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320444 [Multi-domain]  Cd Length: 268  Bit Score: 42.60  E-value: 1.76e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  25 PEFQALLFLLFLLLYLMILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQ 104
Cdd:cd15321   3 VQATAAIAAAITFLILFTIFGNVLVIIAVLTSRSLRAPQNLFLVSLAAADILVATLIIPFSLANELMGYWYFRKTWCEIY 82
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*..
gi 22128953 105 MFFFVTLGSTDCFLLAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15321  83 LALDVLFCTSSIVHLCAISLDRYWSVSRAIEYNSKRTPRRIKCIILIVWLIAAVISL 139
7tmA_Octopamine_R cd15063
octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G ...
41-159 1.78e-04

octopamine receptors in invertebrates, member of the class A family of seven-transmembrane G protein-coupled receptors; G-protein coupled receptor for octopamine (OA), which functions as a neurotransmitter, neurohormone, and neuromodulator in invertebrate nervous system. Octopamine (also known as beta, 4-dihydroxyphenethylamine) is an endogenous trace amine that is highly similar to norepinephrine, but lacks a hydroxyl group, and has effects on the adrenergic and dopaminergic nervous systems. Based on the pharmacological and signaling profiles, the octopamine receptors can be classified into at least two groups: OA1 receptors elevate intracellular calcium levels in muscle, whereas OA2 receptors activate adenylate cyclase and increase cAMP production.


Pssm-ID: 320191 [Multi-domain]  Cd Length: 266  Bit Score: 42.48  E-value: 1.78e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSN------IFGAqkpislAGCGTQMFFFVTLGST 114
Cdd:cd15063  13 LVVLGNLLVIAAVLCSRKLRTVTNLFIVSLACADLLVGTLVLPFSAVNevldvwIFGH------TWCQIWLAVDVWMCTA 86
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*
gi 22128953 115 DCFLLAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFL 159
Cdd:cd15063  87 SILNLCAISLDRYLAITRPIRYPSLMSTKRAKCLIAGVWVLSFVI 131
7tmA_TACR_family cd14992
tachykinin receptor and closely related proteins, member of the class A family of ...
45-226 1.96e-04

tachykinin receptor and closely related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes G-protein coupled receptors for a variety of neuropeptides of the tachykinin (TK) family as well as closely related receptors. The tachykinins are widely distributed throughout the mammalian central and peripheral nervous systems and act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. SP is a high-affinity endogenous ligand for NK1R, which interacts with the Gq protein and activates phospholipase C, leading to elevation of intracellular calcium. NK2R is a high-affinity receptor for NKA, the tachykinin neuropeptide substance K. SP and NKA are found in the enteric nervous system and mediate in the regulation of gastrointestinal motility, secretion, vascular permeability, and pain perception. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320123 [Multi-domain]  Cd Length: 291  Bit Score: 42.42  E-value: 1.96e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMAY 124
Cdd:cd14992  17 GNFIVIAALARHKNLRGATNYFIASLAISDLLMALFCTPFNFTYVVSLSWEYGHFLCKIVNYLRTVSVYASSLTLTAIAF 96
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 125 DRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQEINHFLCDVPPVlrlacaDIHVHQAVL 204
Cdd:cd14992  97 DRYFAIIHPLKPRHRQSYTTTVIIIITIWVVSLLLAIPQLYYATTEVLFSVKNQEKIFCCQIPPV------DNKTYEKVY 170
                       170       180
                ....*....|....*....|...
gi 22128953 205 YVVGILVLTV-PFLLICISYVFI 226
Cdd:cd14992 171 FLLIFVVIFVlPLIVMTLAYARI 193
7tmA_AstC_insect cd15094
somatostatin-like receptor for allatostatin C, member of the class A family of ...
43-161 2.32e-04

somatostatin-like receptor for allatostatin C, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled somatostatin receptors (SSTRs) are composed of five distinct subtypes (SSTR1-5) that display strong sequence similarity with opioid receptors. All five receptor subtypes bind the natural somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. In Drosophila melanogaster and other insects, a 15-amino-acid peptide named allatostatin C(AstC) binds the somatostatin-like receptors. Two AstC receptors have been identified in Drosophila with strong sequence homology to human somatostatin and opioid receptors.


Pssm-ID: 320222 [Multi-domain]  Cd Length: 282  Bit Score: 42.08  E-value: 2.32e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQkPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15094  15 LVGNGLVIYVVLRYAKMKTVTNLYILNLAVADECFLIGLPFLIVTMILKYW-PFGAAMCKIYMVLTSINQFTSSFTLTVM 93
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15094  94 SADRYLAVCHPIRSMRYRTPFIAKVVCATTWSISFLVML 132
7tmA_PR4-like cd15392
neuropeptide Y receptor-like found in insect and related proteins, member of the class A ...
45-161 2.37e-04

neuropeptide Y receptor-like found in insect and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes a novel G protein-coupled receptor (also known as PR4 receptor) from Drosophila melanogaster, which can be activated by the members of the neuropeptide Y (NPY) family, including NPY, peptide YY (PYY) and pancreatic polypeptide (PP), when expressed in Xenopus oocytes. These homologous peptides of 36-amino acids in length contain a hairpin-like structural motif, which referred to as the pancreatic polypeptide fold, and function as gastrointestinal hormones and neurotransmitters. The PR4 receptor also shares strong sequence homology to the mammalian tachykinin receptors (NK1R, NK2R, and NK3R), whose endogenous ligands are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB), respectively. The tachykinins function as excitatory transmitters on neurons and cells in the gastrointestinal tract.


Pssm-ID: 320514 [Multi-domain]  Cd Length: 287  Bit Score: 41.96  E-value: 2.37e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLML-SNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMA 123
Cdd:cd15392  17 GNGLVCYIVVSYPRMRTVTNYFIVNLALSDILMAVFCVPFSFiALLILQYWPFGEFMCPVVNYLQAVSVFVSAFTLVAIS 96
                        90       100       110
                ....*....|....*....|....*....|....*...
gi 22128953 124 YDRYVAICHPLhySLIMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15392  97 IDRYVAIMWPL--RPRMTKRQALLLIAVIWIFALATAL 132
7tmA_D1-like_dopamine_R cd15057
D1-like family of dopamine receptors, member of the class A family of seven-transmembrane G ...
43-161 2.43e-04

D1-like family of dopamine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. In contrast, activation of D2-like family receptors is linked to G proteins of the G(i) family, which inhibit adenylate cyclase. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320185 [Multi-domain]  Cd Length: 299  Bit Score: 42.03  E-value: 2.43e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMY-FFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISlAGCGTQMFFFVTLGSTDCFLLAV 121
Cdd:cd15057  15 LLGNALVIAAVLRFRHLRSKVTnYFIVSLAVSDLLVAILVMPWAAVNEVAGYWPFG-SFCDVWVSFDIMCSTASILNLCV 93
                        90       100       110       120
                ....*....|....*....|....*....|....*....|
gi 22128953 122 MAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15057  94 ISVDRYWAISSPFRYERRMTRRRAFIMIAVAWTLSALISF 133
7tmA_leucokinin-like cd15393
leucokinin-like peptide receptor from tick and related proteins, member of the class A family ...
41-230 2.66e-04

leucokinin-like peptide receptor from tick and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes a leucokinin-like peptide receptor from the Southern cattle tick, Boophilus microplus, a pest of cattle world-wide. Leucokinins are invertebrate neuropeptides that exhibit myotropic and diuretic activity. This receptor is the first neuropeptide receptor known from the Acari and the second known in the subfamily of leucokinin-like peptide G-protein-coupled receptors. The other known leucokinin-like peptide receptor is a lymnokinin receptor from the mollusc Lymnaea stagnalis.


Pssm-ID: 320515 [Multi-domain]  Cd Length: 288  Bit Score: 42.01  E-value: 2.66e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15393  13 VAVVGNFLVIWVVAKNRRMRTVTNIFIANLAVADIIIGLFSIPFQFQAALLQRWVLPRFMCPFCPFVQVLSVNVSVFTLT 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSliMTKKLCVQMVMGSWSLALflslqLTALIFTLPFCGHDQEINHFLCDVPPVLRLACADiHVH 200
Cdd:cd15393  93 VIAVDRYRAVIHPLKAR--CSKKSAKIIILIIWILAL-----LVALPVALALRVEELTDKTNNGVKPFCLPVGPSD-DWW 164
                       170       180       190
                ....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLTVPFLLICISYVFIASTI 230
Cdd:cd15393 165 KIYNLYLVCVQYFVPLVIICYAYTRIAVKI 194
7tmA_5-HT4 cd15056
serotonin receptor subtype 4, member of the class A family of seven-transmembrane G ...
41-249 2.86e-04

serotonin receptor subtype 4, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT4 subtype is a member of the serotonin receptor family that belongs to the class A G protein-coupled receptors, and binds the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the mammalian central nervous system (CNS). 5-HT4 receptors are selectively linked to G proteins of the G(s) family, which positively stimulate adenylate cyclase, causing cAMP formation and activation of protein kinase A. 5-HT4 receptor-specific agonists have been shown to enhance learning and memory in animal studies. Moreover, hippocampal 5-HT4 receptor expression has been reported to be inversely correlated with memory performance in humans. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320184 [Multi-domain]  Cd Length: 294  Bit Score: 41.71  E-value: 2.86e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15056  13 LTILGNLLVIVAVCTDRQLRKKTNYFVVSLAVADLLVAVLVMPFGAIELVNNRWIYGETFCLVRTSLDVLLTTASIMHLC 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAIC-HPLHYSliMTKKLCVQMVMGSWSLALFLSLqLTALIfTLPFCGHDQEINHFLCDVPPVlrlaCADIhV 199
Cdd:cd15056  93 CIALDRYYAICcQPLVYK--MTPLRVAVMLGGCWVIPTFISF-LPIMQ-GWNHIGIEDLIAFNCASGSTS----CVFM-V 163
                       170       180       190       200       210
                ....*....|....*....|....*....|....*....|....*....|.
gi 22128953 200 HQAVLYVVGILVLTVPFLLICISYVFIASTILR-MRSAEGRQRAFSTCSSH 249
Cdd:cd15056 164 NKPFAIICSTVAFYIPALLMVLAYYRIYVAAREqAHQIRSLQRAGSSNHEA 214
7tmA_SSTR cd15093
somatostatin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
43-239 2.96e-04

somatostatin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled somatostatin receptors (SSTRs) are composed of five distinct subtypes (SSTR1-5) that display strong sequence similarity with opioid receptors. All five receptor subtypes bind the natural somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. They share common signaling cascades such as inhibition of adenylyl cyclase, activation of phosphotyrosine phosphatase activity, and G-protein-dependent regulation of MAPKs.


Pssm-ID: 320221 [Multi-domain]  Cd Length: 280  Bit Score: 41.68  E-value: 2.96e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNI-----FGAQK-PISLAGCGTQMFffvtlgsTDC 116
Cdd:cd15093  15 LCGNSLVIYVVLRYAKMKTVTNIYILNLAIADELFMLGLPFLAASNAlrhwpFGSVLcRLVLSVDGINMF-------TSI 87
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 117 FLLAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLtaLIFTLPFCGHDQeinhflcdvppvlRLACAD 196
Cdd:cd15093  88 FCLTVMSVDRYLAVVHPIKSARWRRPRVAKVVNLAVWVASLLVILPV--VVFAGTRENQDG-------------SSACNM 152
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*....
gi 22128953 197 IHVHQAVLYVVGILVLT------VPFLLICISYVFIastILRMRSAEGR 239
Cdd:cd15093 153 QWPEPAAAWSAGFIIYTfvlgflLPLLIICLCYLLI---VIKVKSAGLR 198
7tmA_GRPR cd15124
gastrin-releasing peptide receptor, member of the class A family of seven-transmembrane G ...
43-232 3.14e-04

gastrin-releasing peptide receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The gastrin-releasing peptide receptor (GRPR) is a G-protein coupled receptor whose endogenous ligand is gastrin releasing peptide. GRP shares high sequence homology with the neuropeptide neuromedin B in the C-terminal region. This receptor is high glycosylated and couples to a pertussis-toxin-insensitive G protein of the family of Gq/11, which leads to the activation of phospholipase C. Gastrin-releasing peptide (GRP) is a potent mitogen for neoplastic tissues and involved in regulating multiple functions of the gastrointestinal and central nervous systems. These include the release of gastrointestinal hormones, the contraction of smooth muscle cells, and the proliferation of epithelial cells. GRPR belongs to the bombesin subfamily of G-protein coupled receptors, whose members also include neuromedin B receptor (NMBR) and bombesin receptor subtype 3 (BRS-3). Bombesin is a tetradecapeptide, originally isolated from frog skin.


Pssm-ID: 320252 [Multi-domain]  Cd Length: 293  Bit Score: 41.81  E-value: 3.14e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15124  15 LIGNITLIKIFCTVKSMRNVPNLFISSLALGDLLLLVTCAPVDASRYLADEWLFGRVGCKLIPFIQLTSVGVSVFTLTAL 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLI-MTKKLCVQMVMgSWSLALFLSLQLTALIFTLPFcgHDQEINHFLCDVPPVLRLACADIHVHQ 201
Cdd:cd15124  95 SADRYKAIVRPMDIQASnALMKICLKAAL-IWILSMLLAIPEAVFSDLHPF--YDKSTNKTFVSCAPYPHSNELHPKIHS 171
                       170       180       190
                ....*....|....*....|....*....|.
gi 22128953 202 AVLYVVgilVLTVPFLLICISYVFIASTILR 232
Cdd:cd15124 172 MASFLI---FYVIPLSIISVYYYFIAKNLIR 199
7tmA_motilin_R cd15132
motilin receptor, member of the class A family of seven-transmembrane G protein-coupled ...
45-305 3.33e-04

motilin receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Motilin receptor, also known as GPR38, is a G-protein coupled receptor that binds the endogenous ligand motilin. Motilin is a 22 amino acid peptide hormone expressed throughout the gastrointestinal tract and stimulates contraction of gut smooth muscle. Motilin is also called as the housekeeper of the gut because it is responsible for the proper filling and emptying of the gastrointestinal tract in response to food intake, and for stimulating the production of pepsin. Motilin receptor shares significant amino acid sequence identity with the growth hormone secretagogue receptor (GHSR) and neurotensin receptors (NTS-R1 and 2).


Pssm-ID: 320260 [Multi-domain]  Cd Length: 289  Bit Score: 41.71  E-value: 3.33e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSV--LEIFYTtdvVPLMLSNIFGAqKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15132  17 GNTMTVLIIRRYKDMRTTTNLYLSSMAVsdLLILLC---LPFDLYRLWKS-RPWIFGEFLCRLYHYISEGCTYATILHIT 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AY--DRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALflsLQLTALIFTLpfcGHDQEINHFLCDVPPVLRLACADIHVH 200
Cdd:cd15132  93 ALsiERYLAICFPLRAKVLVTRRRVKCVIAALWAFAL---LSAGPFLFLV---GVEQDNNIHPDDFSRECKHTPYAVSSG 166
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 Q-AVLYVVGILVLTVPFLLICISYVFIASTI------LRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVYLRPRSSTSE 273
Cdd:cd15132 167 LlGIMIWVTTTYFFLPMLCLSFLYGFIGRKLwkskndLRGPNAAARERSHRQTVRILAVVVLAFIICWLPFHIGRILFAN 246
                       250       260       270       280
                ....*....|....*....|....*....|....*....|..
gi 22128953 274 DEDRQ----------IALVYTFVTPLLNPLIYTLRNKDVKGA 305
Cdd:cd15132 247 TEDYRtmmfsqyfniVAMQLFYLSASINPILYNLISRKYRAA 288
7tmA_NPSR cd15197
neuropeptide S receptor, member of the class A family of seven-transmembrane G protein-coupled ...
42-230 3.71e-04

neuropeptide S receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropeptide S (NPS) promotes arousal and anxiolytic-like effects by activating its cognate receptor NPSR. NPSR is widely expressed in the brain, and its activation induces an elevation of intracellular calcium and cAMP concentrations, presumably by coupling to G(s) and G(q) proteins. Mutations in NPSR have been associated with an increased susceptibility to asthma. NPSR was originally identified as an orphan receptor GPR154 and is also known as G protein receptor for asthma susceptibility (GPRA) or vasopressin receptor-related receptor 1 (VRR1).


Pssm-ID: 320325 [Multi-domain]  Cd Length: 294  Bit Score: 41.64  E-value: 3.71e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  42 ILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAV 121
Cdd:cd15197  14 IVVGNSSVLFALWMRKAKKSRMNFFITQLAIADLCVGLINVLTDIIWRITVEWRAGDFACKVIRYLQVVVTYASTYVLVA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 122 MAYDRYVAICHPLHYSliMTKKLCVQMVMGSWSLALFLSLQlTALIFTLPFCGHDQEinhflcdvppvlrlAC-----AD 196
Cdd:cd15197  94 LSIDRYDAICHPMNFS--QSGRQARVLICVAWILSALFSIP-MLIIFEKTGLSNGEV--------------QCwilwpEP 156
                       170       180       190
                ....*....|....*....|....*....|....
gi 22128953 197 IHVhQAVLYVVGILVLTVPFLLICISYVFIASTI 230
Cdd:cd15197 157 WYW-KVYMTIVAFLVFFIPATIISICYIIIVRTI 189
7tmA_GPR3_GPR6_GPR12-like cd15100
G protein-coupled receptors 3, 6, 12, and related proteins, member of the class A family of ...
41-306 3.82e-04

G protein-coupled receptors 3, 6, 12, and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR3, GPR6, and GPR12 form a subfamily of constitutively active G-protein coupled receptors with dual coupling to G(s) and G(i) proteins. These three orphan receptors are involved in the regulation of cell proliferation and survival, neurite outgrowth, cell clustering, and maintenance of meiotic prophase arrest. They constitutively activate adenylate cyclase to a similar degree as that seen with fully activated G(s)-coupled receptors, and are also able to constitutively activate inhibitory G(i/o) proteins. Lysophospholipids such as sphingosine 1-phosphate (S1P) and sphingosylphosphorylcholine have been detected as the high-affinity ligands for Gpr6 and Gpr12, respectively, which show high sequence homology with GPR3. Also included in this subfamily is GPRx, also known as GPR185, which involved in the maintenance of meiotic arrest in frog oocytes.


Pssm-ID: 320228 [Multi-domain]  Cd Length: 268  Bit Score: 41.31  E-value: 3.82e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTtdvVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15100  13 LIACENAIVVAIIFSTPSLRAPMFLLIGSLALADLLAG---LGLILHFVFRYCVYSEALSLVSVGLLVAAFSASVCSLLA 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VmAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLqltaliftLPFCGHDQEINHFLCDV-PPVLRlacadihV 199
Cdd:cd15100  90 I-TVDRYLSLYNALTYYSERTLTFTYVMLALLWTLALGLGL--------LPVLGWNCLREGSSCSVvRPLTK-------N 153
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 200 HQAVLYVVGILVLTVPFLLicisYVFIASTILRMRSAEGRQRAFSTCS---------SHLTVVLLQYGCCSLvylrPRSS 270
Cdd:cd15100 154 HLAVLAVAFLLVFALMLQL----YAQICRIVLRHAHQIALQRHFLAPShyvatrkgvSTLALILGTFAACWI----PFAV 225
                       250       260       270       280
                ....*....|....*....|....*....|....*....|...
gi 22128953 271 TSEDEDRQIALVYTFVT-------PLLNPLIYTLRNKDVKGAL 306
Cdd:cd15100 226 YCLLGDGSSPALYTYATllpatynSMINPIIYAFRNQDIQKVL 268
7tmA_TAAR5-like cd15317
trace amine-associated receptor 5 and similar receptors, member of the class A family of ...
41-169 3.84e-04

trace amine-associated receptor 5 and similar receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Included in this group are mammalian TAAR5, TAAR6, TAAR8, TAAR9, and similar proteins. They are among the 15 identified trace amine-associated receptors (TAARs), a distinct subfamily within the class A G protein-coupled receptors. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320440 [Multi-domain]  Cd Length: 290  Bit Score: 41.28  E-value: 3.84e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPL-MLSNI-----FGAqkpislAGCGTQMFFFVTLGST 114
Cdd:cd15317  13 ITVSGNLVVIISISHFKQLHSPTNMLVLSLATADFLLGLCVMPFsMIRTVetcwyFGD------LFCKFHTGLDLLLCTT 86
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*
gi 22128953 115 DCFLLAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLqltALIFT 169
Cdd:cd15317  87 SIFHLCFIAIDRYYAVCDPLRYPSKITVQVAWRFIAIGWLVPGIYTF---GLIYT 138
7tmA_NMU-R2 cd15357
neuromedin U receptor subtype 2, member of the class A family of seven-transmembrane G ...
45-166 3.87e-04

neuromedin U receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuromedin U (NMU) is a highly conserved neuropeptide with a common C-terminal heptapeptide sequence (FLFRPRN-amide) found at the highest levels in the gastrointestinal tract and pituitary gland of mammals. Disruption or replacement of residues in the conserved heptapeptide region can result in the reduced ability of NMU to stimulate smooth-muscle contraction. Two G-protein coupled receptor subtypes, NMU-R1 and NMU-R2, with a distinct expression pattern, have been identified to bind NMU. NMU-R1 is expressed primarily in the peripheral nervous system, while NMU-R2 is mainly found in the central nervous system. Neuromedin S, a 36 amino-acid neuropeptide that shares a conserved C-terminal heptapeptide sequence with NMU, is a highly potent and selective NMU-R2 agonist. Pharmacological studies have shown that both NMU and NMS inhibit food intake and reduce body weight, and that NMU increases energy expenditure.


Pssm-ID: 320479 [Multi-domain]  Cd Length: 293  Bit Score: 41.39  E-value: 3.87e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPL----MLSN---IFGAqkpislAGCGTQMFFFVTLGSTDCF 117
Cdd:cd15357  17 GNLLVCLVILKHQNMKTPTNYYLFSLAVSDLLVLLFGMPLevyeMWSNypfLFGP------VGCYFKTALFETVCFASIL 90
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 22128953 118 LLAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTAL 166
Cdd:cd15357  91 SVTTVSVERYVAILHPFRAKLNSTRERALKIIVVLWVLSVLFSIPNTSI 139
7tmA_GPR12 cd15961
G protein-coupled receptor 12, member of the class A family of seven-transmembrane G ...
41-306 4.19e-04

G protein-coupled receptor 12, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR3, GPR6, and GPR12 form a subfamily of constitutively active G-protein coupled receptors with dual coupling to G(s) and G(i) proteins. These three orphan receptors are involved in the regulation of cell proliferation and survival, neurite outgrowth, cell clustering, and maintenance of meiotic prophase arrest. They constitutively activate adenylate cyclase to a similar degree as that seen with fully activated G(s)-coupled receptors, and are also able to constitutively activate inhibitory G(i/o) proteins. Lysophospholipids such as sphingosine 1-phosphate (S1P) and sphingosylphosphorylcholine have been detected as the high-affinity ligands for Gpr6 and Gpr12, respectively, which show high sequence homology with GPR3.


Pssm-ID: 320627 [Multi-domain]  Cd Length: 268  Bit Score: 41.17  E-value: 4.19e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTtdvVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15961  13 LISCENAIVVLIIFQNPSLRAPMFLLIGSLALADLLAG---IGLILNFIFAYLLQSEAAKLVTVGLIVASFSASVCSLLA 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAyDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLqltaliftLPFCGHDQEINHFLCDVPPVLRLACAdihvh 200
Cdd:cd15961  90 ITV-DRYLSLYYALTYNSERTVTFTYVMLVLLWGASICLGL--------LPVMGWNCLADESTCSVVRPLTKNNA----- 155
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 qAVLYVVGILVltvpFLLICISYVFIASTILRMRSAEGRQRAFSTCS---------SHLTVVLLQYGCCSLvylrPRSST 271
Cdd:cd15961 156 -AILSVSFLLM----FALMLQLYIQICKIVMRHAHQIALQHHFLATShyvttrkgvSTLAIILGTFAACWM----PFTLY 226
                       250       260       270       280
                ....*....|....*....|....*....|....*....|..
gi 22128953 272 SEDEDRQIALVYTFVTPL-------LNPLIYTLRNKDVKGAL 306
Cdd:cd15961 227 SLIADYTYPSIYTYATLLpatynsiINPVIYAFRNQEIQKAL 268
7tmA_GPR161 cd15214
orphan G protein-coupled receptor 161, member of the class A family of seven-transmembrane G ...
41-306 5.19e-04

orphan G protein-coupled receptor 161, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR161, an orphan GPCR, is a negative regulator of Sonic hedgehog (Shh) signaling, which promotes the processing of zinc finger protein GLI3 into its transcriptional repressor form (GLI3R) during neural tube development. In the absence of Shh, this proteolytic processing is normally mediated by cAMP-dependent protein kinase A (PKA). GPR161 is recruited to primary cilia by a mechanism depends on TULP3 (tubby-related protein 3) and the intraflagellar complex A (IFT-A). Moreover, Gpr161 knockout mice show phenotypes observed in Tulp3/IFT-A mutants, and cause increased Shh signaling in the neural tube. Taken together, GPR161 negatively regulates the PKA-dependent GLI3 processing in the absence of Shh signal by coupling to G(s) protein, which causes activation of adenylate cyclase, elevated cAMP levels, and activation of PKA. Conversely, in the presence of Shh, GPR161 is removed from the cilia by internalization into the endosomal recycling compartment, leading to downregulation of its activity and thereby allowing Shh signaling to proceed. In addition, GPR161 is over-expressed in triple-negative breast cancer (lacking estrogen receptor, progesterone receptor, and human epidermal growth factor receptor 2 (HER2) expression) and correlates with poor prognosis. Mutations of GPR161 have also been implicated as a novel cause for pituitary stalk interruption syndrome (PSIS), a rare congenital disease of the pituitary gland. GPR161 is a member of the class A family of GPCRs, which contains receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320342 [Multi-domain]  Cd Length: 261  Bit Score: 41.08  E-value: 5.19e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15214  12 LICLGNLVIVVTLYKKSYLLTLSNKFVFSLTLSNLLLSVLVLPFVVTSSIRREWIFGVVWCNFSALLYLLISSASMLTLG 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWslalflslqLTALIFTLP--FCGHDQEINHFlcdvppvlRLAC-ADI 197
Cdd:cd15214  92 AIAIDRYYAVLYPMVYPMKITGNRAVLALVYIW---------LHSLIGCLPplFGWSSLEFDRF--------KWMCvAAW 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 198 HVHQAVLYVVGILVLTVPFLLICISYVFIastilrMRSAEGRQ-RAFSTCSSHLTVVLLQYGCCSLVY----LRPRSSTS 272
Cdd:cd15214 155 HKEAGYTAFWQVWCALLPFVVMLVCYGFI------FRVARANQcKAFITILVVLGAFVTTWGPYMVVIsteaLWGKNSVS 228
                       250       260       270
                ....*....|....*....|....*....|....
gi 22128953 273 EDEDrQIALVYTFVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15214 229 PQLE-TLATWLSFTSAVCHPLIYGLWNKTVRKEL 261
7tmA_Chemokine_R cd14984
classical and atypical chemokine receptors, member of the class A family of ...
117-242 6.34e-04

classical and atypical chemokine receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Chemokines are principal regulators for leukocyte trafficking, recruitment, and activation. Chemokine family membership is defined on the basis of sequence homology and on the presence of variations on a conserved cysteine motif, which allows the family to further divide into four subfamilies (CC, CXC, XC, and CX3C). Chemokines interact with seven-transmembrane receptors which are typically coupled to G protein for signaling. Currently, there are ten known receptors for CC chemokines, seven for CXC chemokines, and single receptors for the XC and CX3C chemokines. In addition to these classical chemokine receptors, there exists a subfamily of atypical chemokine receptors (ACKRs) that are unable to couple to G-proteins and, instead, they preferentially mediate beta-arrestin dependent processes, such as receptor internalization, after ligand binding. The classical chemokine receptors contain a conserved DRYLAIV motif in the second intracellular loop, which is required for G-protein coupling. However, the ACKRs lack this conserved motif and fail to couple to G-proteins and induce classical GPCR signaling. Five receptors have been identified for the ACKR family, including CC-chemokine receptors like 1 and 2 (CCRL1 and CCRL2), CXCR7, Duffy antigen receptor for chemokine (DARC), and D6. Both ACKR1 (DARC) and ACKR3 (CXCR7) show low sequence homology to the classic chemokine receptors.


Pssm-ID: 341319 [Multi-domain]  Cd Length: 278  Bit Score: 40.66  E-value: 6.34e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 117 FLLAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQltALIFTlpfcGHDQEINHFLCDvpPVLRLACAD 196
Cdd:cd14984  87 LFLACISIDRYLAIVHAVSALRARTLLHGKLTCLGVWALALLLSLP--EFIFS----QVSEENGSSICS--YDYPEDTAT 158
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*...
gi 22128953 197 I--HVHQAVLYVVGILvltVPFLLICISYVFIASTILRMRSAEgRQRA 242
Cdd:cd14984 159 TwkTLLRLLQNILGFL---LPLLVMLFCYSRIIRTLLRARNHK-KHRA 202
7tmA_Melanopsin cd15336
vertebrate melanopsins (Opsin-4), member of the class A family of seven-transmembrane G ...
45-161 6.94e-04

vertebrate melanopsins (Opsin-4), member of the class A family of seven-transmembrane G protein-coupled receptors; Melanopsin (also called Opsin-4) is the G protein-coupled photopigment that mediates non-visual responses to light. In mammals, these photoresponses include the photo-entrainment of circadian rhythm, pupillary constriction, and acute nocturnal melatonin suppression. Mammalian melanopsins are expressed only in the inner retina, whereas non-mammalian vertebrate melanopsins are localized in various extra-retinal tissues such as iris, brain, pineal gland, and skin. Melanopsins belong the class A of the G protein-coupled receptors and possess seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops.


Pssm-ID: 320458 [Multi-domain]  Cd Length: 290  Bit Score: 40.86  E-value: 6.94e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMAY 124
Cdd:cd15336  17 GNALVIYAFCRSKKLRTPANYFIINLAVSDFLMSLTQSPIFFVNSLHKRWIFGEKGCELYAFCGALFGITSMITLLAISL 96
                        90       100       110
                ....*....|....*....|....*....|....*..
gi 22128953 125 DRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15336  97 DRYLVITKPLASIRWVSKKRAMIIILLVWLYSLAWSL 133
7tmA_MCR cd15103
melanocortin receptors, member of the class A family of seven-transmembrane G protein-coupled ...
46-153 6.98e-04

melanocortin receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320231 [Multi-domain]  Cd Length: 270  Bit Score: 40.55  E-value: 6.98e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  46 NAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYT------TDVVPLMLSN--IFGAQKPISLAGCGTQMFFFVTLGSTdCF 117
Cdd:cd15103  18 NILVILAIAKNKNLHSPMYFFICSLAVADMLVSvsnaleTIVIILLNNGylVPRDSFEQHIDNVIDSMICSSLLASI-CS 96
                        90       100       110
                ....*....|....*....|....*....|....*.
gi 22128953 118 LLAVmAYDRYVAICHPLHYSLIMTKKLCVQMVMGSW 153
Cdd:cd15103  97 LLAI-AVDRYITIFYALRYHSIMTVRRAGVIITAIW 131
7tmA_alpha2A_AR cd15322
alpha-2 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G ...
41-160 7.86e-04

alpha-2 adrenergic receptors subtype A, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-2 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that have a key role in neurotransmitter release: alpha-2A, alpha-2B, and alpha-2C. In addition, a fourth subtype, alpha-2D is present in ray-finned fishes and amphibians, but is not found in humans. The alpha-2 receptors are found in both central and peripheral nervous system and serve to produce inhibitory functions through the G(i) proteins. Thus, the alpha-2 receptors inhibit adenylate cyclase, which decreases cAMP production and thereby decreases calcium influx during the action potential. Consequently, lowered levels of calcium will lead to a decrease in neurotransmitter release by negative feedback.


Pssm-ID: 320445 [Multi-domain]  Cd Length: 259  Bit Score: 40.31  E-value: 7.86e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15322  13 LTVFGNVLVIIAVFTSRALKAPQNLFLVSLASADILVATLVIPFSLANEVMGYWYFGKVWCEIYLALDVLFCTSSIVHLC 92
                        90       100       110       120
                ....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLS 160
Cdd:cd15322  93 AISLDRYWSITQAIEYNLKRTPRRIKCIIFIVWVISAVIS 132
7tmA_5-HT2 cd15052
serotonin receptor subtype 2, member of the class A family of seven-transmembrane G ...
45-166 8.53e-04

serotonin receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320180 [Multi-domain]  Cd Length: 262  Bit Score: 40.37  E-value: 8.53e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPL-MLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMA 123
Cdd:cd15052  17 GNILVCLAISLEKRLQNVTNYFLMSLAIADLLVGLLVMPLsILTELFGGVWPLPLVLCLLWVTLDVLFCTASIMHLCTIS 96
                        90       100       110       120
                ....*....|....*....|....*....|....*....|...
gi 22128953 124 YDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTAL 166
Cdd:cd15052  97 LDRYMAIRYPLRTRRNKSRTTVFLKIAIVWLISIGISSPIPVL 139
7tmA_alpha1_AR cd15062
alpha-1 adrenergic receptors, member of the class A family of seven-transmembrane G ...
41-161 8.54e-04

alpha-1 adrenergic receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320190 [Multi-domain]  Cd Length: 261  Bit Score: 40.16  E-value: 8.54e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15062  13 FAIGGNLLVILSVACNRHLRTPTHYFIVNLAVADLLLSFTVLPFSATLEVLGYWAFGRIFCDVWAAVDVLCCTASIMSLC 92
                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15062  93 VISVDRYIGVRYPLNYPTIVTARRATVALLIVWVLSLVISI 133
7tmA_Beta3_AR cd15959
beta-3 adrenergic receptors (adrenoceptors), member of the class A family of ...
42-161 9.27e-04

beta-3 adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta-3 adrenergic receptor (beta-3 adrenoceptor), also known as beta-3 AR, is activated by adrenaline and plays important roles in regulating cardiac function and heart rate. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of betrayers can lead to cardiac dysfunction such as arrhythmias or heart failure.


Pssm-ID: 320625 [Multi-domain]  Cd Length: 302  Bit Score: 40.28  E-value: 9.27e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  42 ILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAV 121
Cdd:cd15959  14 IVGGNLLVIVAIAKTPRLQTMTNVFVTSLACADLVMGLLVVPPGATILLTGHWPLGTTVCELWTSVDVLCVTASIETLCA 93
                        90       100       110       120
                ....*....|....*....|....*....|....*....|
gi 22128953 122 MAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15959  94 IAVDRYLAITNPLRYEALVTKRRARTAVCLVWAISAAISF 133
7tmA_KiSS1R cd15095
KiSS1-derived peptide (kisspeptin) receptor, member of the class A family of ...
43-226 9.28e-04

KiSS1-derived peptide (kisspeptin) receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled KiSS1-derived peptide receptor (GPR54 or kisspeptin receptor) binds the peptide hormone kisspeptin (previously known as metastin), which encoded by the metastasis suppressor gene (KISS1) expressed in various endocrine and reproductive tissues. The KiSS1 receptor is coupled to G proteins of the G(q/11) family, which lead to activation of phospholipase C and increase of intracellular calcium. This signaling cascade plays an important role in reproduction by regulating the secretion of gonadotropin-releasing hormone.


Pssm-ID: 320223 [Multi-domain]  Cd Length: 288  Bit Score: 40.34  E-value: 9.28e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFF-VTLGSTdCFLLAV 121
Cdd:cd15095  15 LAGNSLVIYVVSRHREMRTVTNYYIVNLAVTDLAFLVCCVPFTAALYATPSWVFGDFMCKFVNYMMqVTVQAT-CLTLTA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 122 MAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALiftlpfcgHDQEINHFLCDvppvlRLACADIHVHQ 201
Cdd:cd15095  94 LSVDRYYAIVHPIRSLRFRTPRVAVVVSACIWIVSFLLSIPVAIY--------YRLEEGYWYGP-----QTYCREVWPSK 160
                       170       180       190
                ....*....|....*....|....*....|
gi 22128953 202 A-----VLYVVGILVLtVPFLLICISYVFI 226
Cdd:cd15095 161 AfqkayMIYTVLLTYV-IPLAIIAVCYGLI 189
7tmA_purinoceptor-like cd14982
purinoceptor and its related proteins, member of the class A family of seven-transmembrane G ...
43-264 9.85e-04

purinoceptor and its related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; Members of this subfamily include lysophosphatidic acid receptor, P2 purinoceptor, protease-activated receptor, platelet-activating factor receptor, Epstein-Barr virus induced gene 2, proton-sensing G protein-coupled receptors, GPR35, and GPR55, among others. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341318 [Multi-domain]  Cd Length: 283  Bit Score: 40.33  E-value: 9.85e-04
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTdVVPLMLSNIFGAQKPI-SLAGC-GTQMFFFVTLGSTDCFLlA 120
Cdd:cd14982  15 LLGNILALWVFLRKMKKRSPTTIYMINLALADLLFVL-TLPFRIYYYLNGGWWPfGDFLCrLTGLLFYINMYGSILFL-T 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTlpfcgHDQEINHFLCDVPPVLRLAcadihvh 200
Cdd:cd14982  93 CISVDRYLAVVHPLKSRRLRRKRYAVGVCAGVWILVLVASVPLLLLRST-----IAKENNSTTCFEFLSEWLA------- 160
                       170       180       190       200       210       220
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 22128953 201 QAVLYVVGILVL--TVPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCCSLVY 264
Cdd:cd14982 161 SAAPIVLIALVVgfLIPLLIILVCYSLIIRALRRRSKQSQKSVRKRKALRMILIVLAVFLVCFLPY 226
7tmA_Histamine_H2R cd15051
histamine subtype H2 receptor, member of the class A family of seven-transmembrane G ...
42-306 1.08e-03

histamine subtype H2 receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes histamine receptor subtype H2R, a member of histamine receptor family, which belongs to the class A of GPCRs. Histamine plays a key role as chemical mediator and neurotransmitter in various physiological and pathophysiological processes in the central and peripheral nervous system. Histamine exerts its functions by binding to four different G protein-coupled receptors (H1-H4). The H2R subtype selectively interacts with the G(s)-type G protein that activates adenylate cyclase, leading to increased cAMP production and activation of Protein Kinase A. H2R is found in various tissues such as the brain, stomach, and heart. Its most prominent role is in histamine-induced gastric acid secretion. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320179 [Multi-domain]  Cd Length: 287  Bit Score: 40.01  E-value: 1.08e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  42 ILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAV 121
Cdd:cd15051  14 TVIGNVLVCLAVAVNRRLRNLTNYFIVSLAVTDLLLGLLVLPFSAIYELRGEWPLGPVFCNIYISLDVMLCTASILNLFA 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 122 MAYDRYVAICHPLHYSLIMTKKLcVQMVMGS---WSLAL-FLSLQL---TAliftlpfCGHDQEINHflcdvPPVLRLac 194
Cdd:cd15051  94 ISLDRYLAITAPLRYPSRVTPRR-VAIALAAiwvVSLAVsFLPIHLgwnTP-------DGRVQNGDT-----PNQCRF-- 158
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 195 adiHVHQAVLYVVGILVLTVPFLLICISYVFI-------ASTILRMRSAEGRQRAFS--TCSSH-----LTVVLLQYGCC 260
Cdd:cd15051 159 ---ELNPPYVLLVAIGTFYLPLLIMCGVYLRIfriareqAKRINALTPASTANSSKSaaTAREHkatvtLAAVLGAFIIC 235
                       250       260       270       280       290
                ....*....|....*....|....*....|....*....|....*....|..
gi 22128953 261 SLVY-----LRPRSSTSEDEDRQ-IALVYTFVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15051 236 WFPYftyftYRGLCGDNINETALsVVLWLGYANSALNPILYAFLNRDFRRAF 287
7tmA_GPR84-like cd15210
G protein-coupled receptor 84 and similar proteins, member of the class A family of ...
44-164 1.16e-03

G protein-coupled receptor 84 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR84, also known as the inflammation-related G-Protein coupled receptor EX33, is a receptor for medium-chain free fatty acid (FFA) with carbon chain lengths of C9 to C14. Among these medium-chain FFAs, capric acid (C10:0), undecanoic acid (C11:0), and lauric acid (C12:0) are the most potent endogenous agonists of GPR84, whereas short-chain and long-chain saturated and unsaturated FFAs do not activate this receptor. GPR84 contains a [G/N]RY-motif instead of the highly conserved Asp-Arg-Tyr (DRY) motif found in the third transmembrane helix (TM3) of the rhodopsin-like class A receptors and important for efficient G protein-coupled signal transduction. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, which then activate the heterotrimeric G proteins. In the case of GPR84, activation of the receptor couples to a pertussis toxin sensitive G(i/o)-protein pathway. GPR84 knockout mice showed increased Th2 cytokine production including IL-4, IL-5, and IL-13 compared to wild-type mice. It has been also shown that activation of GPR84 augments lipopolysaccharide-stimulated IL-8 production in polymorphonuclear leukocytes and TNF-alpha production in macrophages, suggesting that GPR84 may function as a proinflammatory receptor.


Pssm-ID: 320338 [Multi-domain]  Cd Length: 254  Bit Score: 39.94  E-value: 1.16e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  44 CGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMA 123
Cdd:cd15210  16 PGNLLTVLALLRSKKLRTRTNAFIINLSISDLLFCAFNLPLAASTFLHQAWIHGETLCRVFPLLRYGLVAVSLLTLVLIT 95
                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
gi 22128953 124 YDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLT 164
Cdd:cd15210  96 LNRYILIAHPSLYPRIYTRRGLALMIAGTWIFSFGSFLPLW 136
7tmA_SSTR2 cd15971
somatostatin receptor type 2, member of the class A family of seven-transmembrane G ...
43-236 1.19e-03

somatostatin receptor type 2, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled somatostatin receptors (SSTRs), which display strong sequence similarity with opioid receptors, binds somatostatin, a polypeptide hormone that regulates a wide variety of physiological such as neurotransmission, endocrine secretion, cell proliferation, and smooth muscle contractility. SSTRs are composed of five distinct subtypes (SSTR1-5) which are encoded by separate genes on different chromosomes. SSTR2 plays critical roles in growth hormone secretion, glucagon secretion, and immune responses. SSTR2 is expressed in the normal human pituitary and in nearly all pituitary growth hormone adenomas.


Pssm-ID: 320637 [Multi-domain]  Cd Length: 279  Bit Score: 39.83  E-value: 1.19e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVvPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15971  15 LCGNTLVIYVILRYAKMKTVTNIYILNLAIADELFMLGL-PFLAIQVALVHWPFGKAICRVVMTVDGINQFTSIFCLTVM 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLtaLIFTLPFCGHDqeinhflcdvppvlRLACADIHVHQA 202
Cdd:cd15971  94 SIDRYLAVVHPIKSAKWRKPRTAKMINMAVWGVSLLVILPI--MIYAGVQTKHG--------------RSSCTIIWPGES 157
                       170       180       190       200
                ....*....|....*....|....*....|....*....|
gi 22128953 203 VLYVVGILVLT------VPFLLICISYVFIastILRMRSA 236
Cdd:cd15971 158 SAWYTGFIIYTfilgffVPLTIICLCYLFI---IIKVKSS 194
7tmA_NTSR1 cd15355
neurotensin receptor subtype 1, member of the class A family of seven-transmembrane G ...
59-233 1.30e-03

neurotensin receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Neurotensin (NTS) is a 13 amino-acid neuropeptide that functions as both a neurotransmitter and a hormone in the nervous system and peripheral tissues, respectively. NTS exerts various biological activities through activation of the G protein-coupled neurotensin receptors, NTSR1 and NTSR2. In the brain, NTS is involved in the modulation of dopamine neurotransmission, opioid-independent analgesia, hypothermia, and the inhibition of food intake, while in the periphery NTS promotes the growth of various normal and cancer cells and acts as a paracrine and endocrine modulator of the digestive tract. The third neurotensin receptor, NTSR3 or also called sortilin, is not a G protein-coupled receptor.


Pssm-ID: 320477 [Multi-domain]  Cd Length: 310  Bit Score: 39.83  E-value: 1.30e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  59 LHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAV--MAYDRYVAICHPLHY 136
Cdd:cd15355  34 LQSTVHYHLASLALSDLLILLLAMPVELYNFIWVHHPWAFGDAACRGYYFLRDACTYATALNVasLSVERYLAICHPFKA 113
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 137 SLIMTKKLCVQMVMGSWSLALFLSlqlTALIFTLpfcghdQEINHFLCDVPPVLRLACADIHVHQAVLYVVGILVLTVPF 216
Cdd:cd15355 114 KSLMSRSRTKKFISAIWLASALLA---IPMLFTM------GEQNRSGTHPGGLICTPIVDTSTLKVVIQVNAFLSFLFPM 184
                       170
                ....*....|....*..
gi 22128953 217 LLICISYVFIASTILRM 233
Cdd:cd15355 185 LVISVLNTLIANQLTVM 201
7tmA_tyramine_octopamine_R-like cd15060
tyramine/octopamine receptor-like, member of the class A family of seven-transmembrane G ...
41-161 1.33e-03

tyramine/octopamine receptor-like, member of the class A family of seven-transmembrane G protein-coupled receptors; This group includes tyramine/octopamine receptors and similar proteins found in insects and other invertebrates. Both octopamine and tyramine mediate their actions via G protein-coupled receptors (GPCRs) and are the invertebrate equivalent of vertebrate adrenergic neurotransmitters. In Drosophila, octopamine is involved in ovulation by mediating an egg release from the ovary, while a physiological role for tyramine in this process is not fully understood. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320188 [Multi-domain]  Cd Length: 260  Bit Score: 39.72  E-value: 1.33e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15060  13 FTIVGNILVILSVFTYRPLRIVQNFFIVSLAVADLAVAIFVLPLNVAYFLLGKWLFGIHLCQMWLTCDILCCTASILNLC 92
                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15060  93 AIALDRYWAIHDPINYAQKRTLKRVLLMIVVVWALSALISV 133
7tmA_D1A_dopamine_R cd15320
D1A (or D1) subtype dopamine receptor, member of the class A family of seven-transmembrane G ...
65-161 1.34e-03

D1A (or D1) subtype dopamine receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320443 [Multi-domain]  Cd Length: 319  Bit Score: 39.99  E-value: 1.34e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  65 FFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISlAGCGTQMFFFVTLGSTDCFLLAVMAYDRYVAICHPLHYSLIMTKKL 144
Cdd:cd15320  39 FFVISLAVSDLLVAVLVMPWKAVAEIAGFWPFG-SFCNIWVAFDIMCSTASILNLCVISVDRYWAISSPFRYERKMTPKV 117
                        90
                ....*....|....*..
gi 22128953 145 CVQMVMGSWSLALFLSL 161
Cdd:cd15320 118 AFIMISVAWTLSVLISF 134
7tmA_PAR cd15162
protease-activated receptors, member of the class A family of seven-transmembrane G ...
43-241 1.41e-03

protease-activated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; This subfamily includes purinergic receptor P2Y8 and protease-activated receptors. P2Y8 (or P2RY8) expression is often increased in leukemia patients, and it plays a role in the pathogenesis of acute leukemia. P2Y8 is phylogenetically closely related to the protease-activated receptors (PARs), which are activated by serine proteases such as thrombin, trypsin, and tryptase. These proteases cleave the extracellular domain of the receptor to form a new N-terminus, which in turn functions as a tethered ligand. The newly-formed tethered ligand binds intramolecularly to activate the receptor and triggers G-protein binding and intracellular signaling. Four different types of the protease-activated receptors have been identified (PAR1-4) and are predominantly expressed in platelets. PAR1, PAR3, and PAR4 are activated by thrombin, whereas PAR2 is activated by trypsin. The PARs are known to couple with several G-proteins including Gi (cAMP inhibitory), G12/13 (Rho and Ras activation), and Gq (calcium signaling) to activate downstream signaling messengers which induces numerous cellular and physiological effects.


Pssm-ID: 341328 [Multi-domain]  Cd Length: 280  Bit Score: 39.74  E-value: 1.41e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15162  15 LPANGMALWVLLFRTKKKAPAVIYMANLAIADLLLVIWLPFKIAYHIHGNNWIFGEALCRLVTVAFYGNMYCSILLLTCI 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWslalflslqLTALIFTLPFCGHDQEInhflcDVPPVLRLACADIH---- 198
Cdd:cd15162  95 SIDRYLAIVHPMGHRRLRARRYALGTCLAIW---------LLALLVTLPLYLVKQTI-----FLPALDITTCHDVLpeql 160
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*.
gi 22128953 199 ---VHQAVLYVVGILVLTVPFLLICISYVFIASTILRMRSAEGRQR 241
Cdd:cd15162 161 lvgDWFYYFLSLAIVGFLIPFILTASCYVATIRTLAALEDENSEKK 206
7tmA_GPR61_GPR62-like cd15220
G protein-coupled receptors 61 and 62, member of the class A family of seven-transmembrane G ...
43-161 1.45e-03

G protein-coupled receptors 61 and 62, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup includes the orphan receptors GPR61 and GPR62, which are both constitutively active and predominantly expressed in the brain. While GPR61 couples to G(s) subtype of G proteins, the signaling pathway and function of GPR 62 are unknown. GPR61-deficient mice displayed significant hyperphagia and heavier body weight compared to wild-type mice, suggesting that GPR61 is involved in the regulation of food intake and body weight. GPR61 transcript expression was found in the caudate, putamen, and thalamus of human brain, whereas GPR62 transcript expression was found in the basal forebrain, frontal cortex, caudate, putamen, thalamus, and hippocampus. Both receptors share the highest sequence homology with each other and comprise a conserved subgroup within the class A family of GPCRs, which includes receptors for hormones, neurotransmitters, sensory stimuli, and a variety of other ligands. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, which then activate the heterotrimeric G proteins. Members of this subgroup contain [A/E]RY motif, a variant of the highly conserved Asp-Arg-Tyr (DRY) motif found in the third transmembrane helix (TM3) of the class A GPCRs and important for efficient G protein-coupled signal transduction.


Pssm-ID: 410633 [Multi-domain]  Cd Length: 264  Bit Score: 39.74  E-value: 1.45e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTpmYFFLSSLSVLEIFYTTDVVPLML--SNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15220  14 LVGNTAVMVVIAKTPHLRK--FAFVCHLCVVDLLAALLLMPLGIlsSSPFFLGVVFGEAECRVYIFLSVCLVSASILTIS 91
                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15220  92 AISVERYYYIVHPMRYEVKMTIGLVAAVLVGVWVKALLLGL 132
7tmA_Adenosine_R_A3 cd15070
adenosine receptor subtype A3, member of the class A family of seven-transmembrane G ...
45-248 1.45e-03

adenosine receptor subtype A3, member of the class A family of seven-transmembrane G protein-coupled receptors; The A3 receptor, a member of the adenosine receptor family of G protein-coupled receptors, is coupled to G proteins of the inhibitory G(i) family, which lead to inhibition of adenylate cyclase and thereby lowering the intracellular cAMP levels. The A3 receptor has a sustained protective function in the heart during cardiac ischemia and contributes to inhibition of neutrophil degranulation in neutrophil-mediated tissue injury. Moreover, activation of A3 receptor by adenosine protects astrocytes from cell death induced by hypoxia.


Pssm-ID: 320198 [Multi-domain]  Cd Length: 280  Bit Score: 39.76  E-value: 1.45e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQkpISLAGCGTQMFFFVTLGSTDCFLLAVMAY 124
Cdd:cd15070  17 GNVLVIWVVKLNPSLRTTTFYFIVSLALADIAVGVLVIPLAIVVSLGVT--IHFYSCLFMSCLLVVFTHASIMSLLAIAV 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 125 DRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALiFTLPFCGHDQEINHFLCDVPPVLRLacadihvhQAVL 204
Cdd:cd15070  95 DRYLRVKLTVRYRIVTTQRRIWLALGLCWLVSFLVGLTPMFG-WNRKPSLESVNTTPLQCQFTSVMRM--------DYMV 165
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....
gi 22128953 205 YVVGILVLTVPFLLICISYVFIASTILRMRSaegrQRAFSTCSS 248
Cdd:cd15070 166 YFSFFTWILIPLVIMCALYVDIFYIIRNKLS----QNATGFRET 205
7tmA_V1bR cd15386
vasopressin receptor subtype 1B, member of the class A family of seven-transmembrane G ...
45-170 1.50e-03

vasopressin receptor subtype 1B, member of the class A family of seven-transmembrane G protein-coupled receptors; The V1b receptor is specifically expressed in corticotropes of the anterior pituitary and plays a critical role in regulating the activity of hypothalamic-pituitary-adrenal axis, a key part of the neuroendocrine system that controls reactions to stress, by maintaining adrenocorticotropic hormone (ACTH) and corticosterone levels. Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) is synthesized in the hypothalamus and is released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320508 [Multi-domain]  Cd Length: 302  Bit Score: 39.78  E-value: 1.50e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTT-DVVPLMLSNI-FGAQKPISLagCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15386  17 GNLAVLLAMYRMRRKMSRMHLFVLHLALTDLVVALfQVLPQLIWEItYRFQGPDLL--CRAVKYLQVLSMFASTYMLIMM 94
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*...
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVqMVMGSWSLALFLSLQlTALIFTL 170
Cdd:cd15386  95 TVDRYIAVCHPLRTLQQPSRQAYL-MIGATWLLSCILSLP-QVFIFSL 140
7tmA_Adenosine_R_A1 cd15071
adenosine receptor subtype A1, member of the class A family of seven-transmembrane G ...
45-161 1.66e-03

adenosine receptor subtype A1, member of the class A family of seven-transmembrane G protein-coupled receptors; The adenosine A1 receptor, a member of the adenosine receptor family of G protein-coupled receptors, binds adenosine as its endogenous ligand. The A1 receptor has primarily inhibitory function on the tissues in which it is located. The A1 receptor slows metabolic activity in the brain and has a strong anti-adrenergic effects in the heart. Thus, it antagonizes beta1-adrenergic receptor-induced stimulation and thereby reduces cardiac contractility. The A1 receptor preferentially couples to G proteins of the G(i/o) family, which lead to inhibition of adenylate cyclase and thereby lowering the intracellular cAMP levels.


Pssm-ID: 341323 [Multi-domain]  Cd Length: 290  Bit Score: 39.45  E-value: 1.66e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKpiSLAGCGTQMFFFVTLGSTDCFLLAVMAY 124
Cdd:cd15071  17 GNVLVIWAVKVNQALRDATFCFIVSLAVADVAVGALVIPLAIIINIGPQT--EFYSCLMVACPVLILTQSSILALLAIAV 94
                        90       100       110
                ....*....|....*....|....*....|....*..
gi 22128953 125 DRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15071  95 DRYLRVKIPTRYKSVVTPRRAAVAIAGCWILSFLVGL 131
7tmA_MC4R cd15353
melanocortin receptor subtype 4, member of the class A family of seven-transmembrane G ...
43-154 1.69e-03

melanocortin receptor subtype 4, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320475 [Multi-domain]  Cd Length: 269  Bit Score: 39.51  E-value: 1.69e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYT------TDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDC 116
Cdd:cd15353  15 LLENILVIAAIAKNKNLHSPMYFFICSLAVADMLVSvsngseTVVITLLNGNDTDAQSFTVNIDNVIDSVICSSLLASIC 94
                        90       100       110
                ....*....|....*....|....*....|....*...
gi 22128953 117 FLLAVmAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWS 154
Cdd:cd15353  95 SLLSI-AVDRYFTIFYALQYHNIMTVRRAGVIITCIWT 131
7tmA_Gal1_R cd15098
galanin receptor subtype 1, member of the class A family of seven-transmembrane G ...
66-223 1.73e-03

galanin receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled galanin receptors bind galanin, a neuropeptide that is widely expressed in the brain, peripheral tissues, and endocrine glands. Three receptors subtypes have been so far identified: GAL1, GAL2, and GAL3. The specific functions of each subtype remains mostly unknown, although galanin is thought to be involved in a variety of neuronal functions such as hormone release and food intake. Galanin is implicated in numerous neurological and psychiatric diseases including Alzheimer's disease, depression, eating disorders, epilepsy and stroke, among many others.


Pssm-ID: 320226 [Multi-domain]  Cd Length: 282  Bit Score: 39.32  E-value: 1.73e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  66 FLSSLSVLEIFYTTDVVPL------MLSNIFGAQKpislagCGTQMFFFVTLGSTDCFLLAVMAYDRYVAICHPLHYSLI 139
Cdd:cd15098  40 FILNLSIADLFFLLFCVPFqatiysLPEWVFGAFM------CKFVHYFFTVSMLVSIFTLVAMSVDRYIAVVHSRTSSSL 113
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 140 MTKKLCVQMVMGSWSLALFLS--LQLTALIFTlpfcgHDQEINHFLC-DVPPVLRLAcadiHVHQAVLYVVGILvltVPF 216
Cdd:cd15098 114 RTRRNALLGVLVIWVLSLAMAspVAVHQDLVH-----HWTASNQTFCwENWPEKQQK----PVYVVCTFVFGYL---LPL 181

                ....*..
gi 22128953 217 LLICISY 223
Cdd:cd15098 182 LLITFCY 188
7tmA_LTB4R2 cd15122
leukotriene B4 receptor subtype 2 (LTB4R2 or BLT2), member of the class A family of ...
43-242 1.74e-03

leukotriene B4 receptor subtype 2 (LTB4R2 or BLT2), member of the class A family of seven-transmembrane G protein-coupled receptors; Leukotriene B4 (LTB4), a metabolite of arachidonic acid, is a powerful chemotactic activator for granulocytes and macrophages. Two receptors for LTB4 have been identified: a high-affinity receptor (LTB4R1 or BLT1) and a low-affinity receptor (TB4R2 or BLT2). Both BLT1 and BLT2 receptors belong to the rhodopsin-like G-protein coupled receptor superfamily and primarily couple to G(i) proteins, which lead to chemotaxis, calcium mobilization, and inhibition of adenylate cyclase. In some cells, they can also couple to the Gq-like protein, G16, and activate phospholipase C. LTB4 is involved in mediating inflammatory processes, immune responses, and host defense against infection. Studies have shown that LTB4 stimulates leukocyte extravasation, neutrophil degranulation, lysozyme release, and reactive oxygen species generation.


Pssm-ID: 320250 [Multi-domain]  Cd Length: 281  Bit Score: 39.40  E-value: 1.74e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIW-VVCTHSALHTPmyffLSSLSVLEIFYTTDVVpLMLSNIFGA-----QKPISLAGCGTQMFFFVTLGSTDC 116
Cdd:cd15122  15 LPGNGFIIWsILWKMKARGRS----VTCILILNLAVADGAV-LLLTPFFITfltrkTWPFGQAVCKAVYYLCCLSMYASI 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 117 FLLAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQltalIFTLPFCGHDQEINHFLCDvppvlrlACAD 196
Cdd:cd15122  90 FIIGLMSLDRCLAVTRPYLAQSLRKKALVRKILLAIWLLALLLALP----AFVYRHVWKDEGMNDRICE-------PCHA 158
                       170       180       190       200
                ....*....|....*....|....*....|....*....|....*..
gi 22128953 197 IHVHQAVLYVVGILV-LTVPFLLICISYVFIAstiLRMRSAEGRQRA 242
Cdd:cd15122 159 SRGHAIFHYTFETLVaFVLPFGVILFSYSVIL---VRLKGARFRRRA 202
7tmA_OT_R cd15387
oxytocin receptor, member of the class A family of seven-transmembrane G protein-coupled ...
43-170 1.86e-03

oxytocin receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Oxytocin is a peptide of nine amino acids synthesized in the hypothalamus and is released from the posterior pituitary gland. Oxytocin plays an important role in sexual reproduction of both sexes and is structurally very similar to vasopressin. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320509 [Multi-domain]  Cd Length: 297  Bit Score: 39.41  E-value: 1.86e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTT-DVVPLMLSNI-FGAQKPISLAGCGTQMFFFVTLGSTdcFLLA 120
Cdd:cd15387  15 LTGNICVLLAIHTTRHKHSRMYFFMKHLSIADLVVAVfQVLPQLIWDItFRFYGPDFLCRLVKYLQVVGMFAST--YMLL 92
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHySLIMTKKLCvqMVMGSWSLALFLSLQLTAlIFTL 170
Cdd:cd15387  93 LMSIDRCLAICQPLR-SLHRRSDRV--YVLFSWLLSLVFSIPQVH-IFSL 138
7tmA_GPR135 cd15212
G protein-coupled receptor 135, member of the class A family of seven-transmembrane G ...
45-172 2.05e-03

G protein-coupled receptor 135, member of the class A family of seven-transmembrane G protein-coupled receptors; GPR135, also known as the somatostatin- and angiotensin-like peptide receptor (SALPR), is found in various tissues including eye, brain, cervix, stomach, and testis. Pharmacological studies have shown that relaxin-3 (R3) is a high-affinity endogenous ligand for GPR135. R3 has recently been identified as a new member of the insulin/relaxin family of peptide hormones and is exclusively expressed in the brain neurons. In addition to GPR135, R3 also acts as an agonist for GPR142, a pseudogene in the rat, and can activate LGR7 (leucine repeat-containing G-protein receptor-7), which is the main receptor for relaxin-1 (R1) and relaxin-2 (R2). While R1 and R2 are hormones primarily associated with reproduction and pregnancy, R3 is involved in neuroendocrine and sensory processing. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320340 [Multi-domain]  Cd Length: 285  Bit Score: 39.37  E-value: 2.05e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIF-GAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMA 123
Cdd:cd15212  17 GNCAVIGVIVKHRQLRTVTNAFILSLSLSDLLTALLCLPFAFLTLFsRPGWLFGDRLCLANGFFNACFGIVSTLTMTLIS 96
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 22128953 124 YDRYVAICHPLHYSliMTKKLCVQMVMGSWslalflslqLTALIFTLPF 172
Cdd:cd15212  97 FDRYYAIVRQPQGK--IGRRRALQLLAAAW---------LTALGFSLPW 134
7tmA_5-HT2B cd15306
serotonin receptor subtype 2B, member of the class A family of seven-transmembrane G ...
45-137 2.29e-03

serotonin receptor subtype 2B, member of the class A family of seven-transmembrane G protein-coupled receptors; The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 341347 [Multi-domain]  Cd Length: 277  Bit Score: 39.04  E-value: 2.29e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNI-FGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMA 123
Cdd:cd15306  17 GNILVILAVSLEKKLQYATNYFLMSLAVADLLVGLFVMPIALLTIlFEAMWPLPLVLCPIWLFLDVLFSTASIMHLCAIS 96
                        90
                ....*....|....
gi 22128953 124 YDRYVAICHPLHYS 137
Cdd:cd15306  97 LDRYIAIKKPIQAS 110
7tmA_V1aR cd15385
vasopressin receptor subtype 1A, member of the class A family of seven-transmembrane G ...
117-160 2.45e-03

vasopressin receptor subtype 1A, member of the class A family of seven-transmembrane G protein-coupled receptors; V1a-type receptor is a G(q/11)-coupled receptor that mediates blood vessel constriction. Vasopressin (also known as arginine vasopressin or anti-diuretic hormone) is synthesized in the hypothalamus and is released from the posterior pituitary gland. The actions of vasopressin are mediated by the interaction of this hormone with three receptor subtypes: V1aR, V1bR, and V2R. These subtypes are differ in localization, function, and signaling pathways. Activation of V1aR and V1bR stimulate phospholipase C, while activation of V2R stimulates adenylate cyclase. Although vasopressin and oxytocin differ only by two amino acids and stimulate the same cAMP/PKA pathway, they have divergent physiological functions. Vasopressin is involved in regulating blood pressure and the balance of water and sodium ions, whereas oxytocin plays an important role in the uterus during childbirth and in lactation.


Pssm-ID: 320507 [Multi-domain]  Cd Length: 301  Bit Score: 39.03  E-value: 2.45e-03
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....
gi 22128953 117 FLLAVMAYDRYVAICHPLHySLIMTKKLCVQMVMGSWSLALFLS 160
Cdd:cd15385  89 YMLVMMTADRYIAICHPLK-TLQQPTKRSYLMIGSAWALSFILS 131
7tmA_NKR_NK3R cd16003
neuromedin-K receptor, member of the class A family of seven-transmembrane G protein-coupled ...
45-161 2.63e-03

neuromedin-K receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The neuromedin-K receptor (NKR), also known as tachykinin receptor 3 (TACR3) or neurokinin B receptor or NK3R, is a G-protein coupled receptor that specifically binds to neurokinin B. The tachykinins (TKs) act as excitatory transmitters on neurons and cells in the gastrointestinal tract. The TKs are characterized by a common five-amino acid C-terminal sequence, Phe-X-Gly-Leu-Met-NH2, where X is a hydrophobic residue. The three major mammalian tachykinins are substance P (SP), neurokinin A (NKA), and neurokinin B (NKB). The physiological actions of tachykinins are mediated through three types of receptors: neurokinin receptor type 1 (NK1R), NK2R, and NK3R. NK3R is activated by its high-affinity ligand, NKB, which is primarily involved in the central nervous system and plays a critical role in the regulation of gonadotropin hormone release and the onset of puberty.


Pssm-ID: 320669 [Multi-domain]  Cd Length: 282  Bit Score: 38.76  E-value: 2.63e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIfyTTDVVPLMLSNIFGAQKP--ISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd16003  17 GNLIVIWIILAHKRMRTVTNYFLVNLAFSDA--SMAAFNTLINFIYALHSEwyFGEAYCRFHNFFPITSVFASIYSMTAI 94
                        90       100       110       120
                ....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTkklCVQMVMGS-WSLALFLSL 161
Cdd:cd16003  95 AVDRYMAIIDPLKPRLSAT---ATKVVIGSiWILAFLLAF 131
7tmA_MCHR-like cd15088
melanin concentrating hormone receptor, member of the class A family of seven-transmembrane G ...
43-301 2.87e-03

melanin concentrating hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Melanin-concentrating hormone receptor (MCHR) binds melanin concentrating hormone and is presumably involved in the neuronal regulation of food intake and energy homeostasis. Despite strong homology with somatostatin receptors, MCHR does not appear to bind somatostatin. Two MCHRs have been characterized in vertebrates, MCHR1 and MCHR2. MCHR1 is expressed in all mammals, whereas MCHR2 is only expressed in the higher order mammals, such as humans, primates, and dogs, and is not found in rodents. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320216 [Multi-domain]  Cd Length: 278  Bit Score: 38.59  E-value: 2.87e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15088  15 LVGNGIVLYVLVRCSKLRTAPDIFIFNLAVADLLFMLGMPFLIHQFAIDGQWYFGEVMCKIITALDANNQFTSTYILTAM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTALIFTLPFCGHDQeinhfLCdvppVLRLACADiHVHQA 202
Cdd:cd15088  95 SVDRYLAVVHPIRSTKYRTRFVAKLVNVGLWAASFLSILPVWVYSSLIYFPDGTT-----FC----YVSLPSPD-DLYWF 164
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 203 VLYVVgILVLTVPFLLICISYV----FIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGC------CSLVYLRPRSSTS 272
Cdd:cd15088 165 TIYHF-ILGFAVPLVVITVCYIlilhRLARGVAPGNQSHGSSRTKRVTKMVILIVVVFIVCwlpfhvVQLVNLAMNRPTL 243
                       250       260       270
                ....*....|....*....|....*....|
gi 22128953 273 EDE-DRQIALVYTFVTPLLNPLIYTLRNKD 301
Cdd:cd15088 244 AFEvAYFLSICLGYANSCLNPFVYILVSEN 273
7tmA_CCK-AR cd15978
cholecystokinin receptor type A, member of the class A family of seven-transmembrane G ...
45-161 3.07e-03

cholecystokinin receptor type A, member of the class A family of seven-transmembrane G protein-coupled receptors; Cholecystokinin receptors (CCK-AR and CCK-BR) are a group of G-protein coupled receptors which bind the peptide hormones cholecystokinin (CCK) or gastrin. CCK, which facilitates digestion in the small intestine, and gastrin, a major regulator of gastric acid secretion, are highly similar peptides. Like gastrin, CCK is a naturally-occurring linear peptide that is synthesized as a preprohormone, then proteolytically cleaved to form a family of peptides with the common C-terminal sequence (Gly-Trp-Met-Asp-Phe-NH2), which is required for full biological activity. CCK-AR (type A, alimentary; also known as CCK1R) is found abundantly on pancreatic acinar cells and binds only sulfated CCK-peptides with very high affinity, whereas CCK-BR (type B, brain; also known as CCK2R), the predominant form in the brain and stomach, binds CCK or gastrin and discriminates poorly between sulfated and non-sulfated peptides. CCK is implicated in regulation of digestion, appetite control, and body weight, and is involved in neurogenesis via CCK-AR. There is some evidence to support that CCK and gastrin, via their receptors, are involved in promoting cancer development and progression, acting as growth and invasion factors.


Pssm-ID: 320644 [Multi-domain]  Cd Length: 278  Bit Score: 38.70  E-value: 3.07e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVP------LMLSNIFGAqkpislAGCGTQMFFFVTLGSTDCFL 118
Cdd:cd15978  17 GNSLIIAVLIRNKRMRTVTNIFLLSLAVSDLMLCLFCMPftlipnLLKDFIFGS------AVCKTATYFMGISVSVSTFN 90
                        90       100       110       120
                ....*....|....*....|....*....|....*....|...
gi 22128953 119 LAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15978  91 LVAISLERYSAICKPLKSRVWQTKSHALKVIAATWCLSFTIML 133
7tmA_CB2 cd15341
cannabinoid receptor subtype 2, member of the class A family of seven-transmembrane G ...
46-306 3.18e-03

cannabinoid receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors; Cannabinoid receptors belong to the class A G-protein coupled receptor superfamily. Two types of cannabinoid receptors, CB1 and CB2, have been identified so far. They are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 320463 [Multi-domain]  Cd Length: 279  Bit Score: 38.67  E-value: 3.18e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  46 NAAIIWVVCTHSALH-TPMYFFLSSLSVLE----IFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGStdcflLA 120
Cdd:cd15341  18 NVAVLYLILSSPKLRrKPSYLFIGSLALADflasVVFACSFVDFHVFHGVDSSAIFLLKLGGVTMSFTASLGS-----LL 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSlalflslqLTALIFTLPFCGHDqeinhfLCDvppvLRLACADIHVH 200
Cdd:cd15341  93 LMAFDRYVCIYYPSEYKALVTRKRALVALAVMWV--------LTALIAYLPLMGWN------CCP----LNSPCSELFPL 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVGILVLtVPFLLICISY-------------VFIASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCC-SLVYLR 266
Cdd:cd15341 155 IPNDYLLSWLLL-VAILLSGIIYtyghvlwkahkhvVYMEKHQDQQGPGNARMRLDVRLAKTLGLVLAVLLICwSPVLAL 233
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*.
gi 22128953 267 PRSSTSEDEDRQIALVYTF------VTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15341 234 MMHSLFTSLSDHIKKAFAFcstlclVNSMVNPIIYALRSRELRSSL 279
7tm_GPCRs cd14964
seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary ...
45-165 3.56e-03

seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary model represents the seven-transmembrane (7TM) receptors, often referred to as G protein-coupled receptors (GPCRs), which transmit physiological signals from the outside of the cell to the inside via G proteins. GPCRs constitute the largest known superfamily of transmembrane receptors across the three kingdoms of life that respond to a wide variety of extracellular stimuli including peptides, lipids, neurotransmitters, amino acids, hormones, and sensory stimuli such as light, smell and taste. All GPCRs share a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. However, some 7TM receptors, such as the type 1 microbial rhodopsins, do not activate G proteins. Based on sequence similarity, GPCRs can be divided into six major classes: class A (the rhodopsin-like family), class B (the Methuselah-like, adhesion and secretin-like receptor family), class C (the metabotropic glutamate receptor family), class D (the fungal mating pheromone receptors), class E (the cAMP receptor family), and class F (the frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410628 [Multi-domain]  Cd Length: 267  Bit Score: 38.56  E-value: 3.56e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  45 GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVMAY 124
Cdd:cd14964  15 GNLLVLLSLVRLRKRPRSTRLLLASLAACDLLASLVVLVLFFLLGLTEASSRPQALCYLIYLLWYGANLASIWTTLVLTY 94
                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
gi 22128953 125 DRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTA 165
Cdd:cd14964  95 HRYFALCGPLKYTRLSSPGKTRVIILGCWGVSLLLSIPPLV 135
7tmA_NMBR cd15125
neuromedin B receptor, member of the class A family of seven-transmembrane G protein-coupled ...
43-232 4.02e-03

neuromedin B receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The neuromedin B receptor (NMBR), also known as BB1, is a G-protein coupled receptor whose endogenous ligand is the neuropeptide neuromedin B. Neuromedin B is a potent mitogen and growth factor for normal and cancerous lung and for gastrointestinal epithelial tissues. NMBR is widely distributed in the CNS, with especially high levels in olfactory nucleus and thalamic regions. The receptor couples primarily to a pertussis-toxin-insensitive G protein of the Gq/11 family, which leads to the activation of phospholipase C. NMBR belongs to the bombesin subfamily of G-protein coupled receptors, whose members also include gastrin-releasing peptide receptor (GRPR) and bombesin receptor subtype 3 (BRS-3). Bombesin is a tetradecapeptide, originally isolated from frog skin.


Pssm-ID: 320253 [Multi-domain]  Cd Length: 292  Bit Score: 38.39  E-value: 4.02e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15125  15 LLGNITLVKIFITNSAMRSVPNIFISSLAAGDLLLLVTCVPVDASRYFYEEWMFGTVGCKLIPVIQLTSVGVSVFTLTAL 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSlqLTALIFTLPFCGHDQEINHFLCDVPPVLrlaCADIH--VH 200
Cdd:cd15125  95 SADRYKAIVNPMDIQTSSAVLRTCLKAIAIWVVSVLLA--VPEAVFSEVAHIMPDDNTTFTACIPYPQ---TDEMHpkIH 169
                       170       180       190
                ....*....|....*....|....*....|..
gi 22128953 201 QAVLYVVGILvltVPFLLICISYVFIASTILR 232
Cdd:cd15125 170 SVLIFLVYFL---IPLAIISIYYYHIAKTLIK 198
7tmA_AstA_R_insect cd15096
allatostatin-A receptor in insects, member of the class A family of seven-transmembrane G ...
43-245 4.04e-03

allatostatin-A receptor in insects, member of the class A family of seven-transmembrane G protein-coupled receptors; The G protein-coupled AstA receptor binds allatostatin A. Three distinct types of allatostatin have been identified in the insects and crustaceans: AstA, AstB, and AstC. They both inhibit the biosynthesis of juvenile hormone and exert an inhibitory influence on food intake. Therefore, allatostatins are considered as potential targets for insect control.


Pssm-ID: 320224 [Multi-domain]  Cd Length: 284  Bit Score: 38.43  E-value: 4.04e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15096  15 LIGNSLVILVVLSNQQMRSTTNILILNLAVADLLFVVFCVPFTATDYVLPTWPFGDVWCKIVQYLVYVTAYASVYTLVLM 94
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWslALFLSLQLTALIFTLPFCGHDQEINHFLCDVPPVLRLAcadIHVHQA 202
Cdd:cd15096  95 SLDRYLAVVHPITSMSIRTERNTLIAIVGIW--IVILVANIPVLFLHGVVSYGFSSEAYSYCTFLTEVGTA---AQTFFT 169
                       170       180       190       200
                ....*....|....*....|....*....|....*....|...
gi 22128953 203 VLYVVGILvltVPFLLICISYVFIASTILRMRSAEGRQRAFST 245
Cdd:cd15096 170 SFFLFSYL---IPLTLICVLYMLMLRRLRRQKSPGGRRSAESQ 209
7tmA_NMU-R cd15133
neuromedin U receptors, member of the class A family of seven-transmembrane G protein-coupled ...
43-166 4.08e-03

neuromedin U receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuromedin U (NMU) is a highly conserved neuropeptide with a common C-terminal heptapeptide sequence (FLFRPRN-amide) found at the highest levels in the gastrointestinal tract and pituitary gland of mammals. Disruption or replacement of residues in the conserved heptapeptide region can result in the reduced ability of NMU to stimulate smooth-muscle contraction. Two G-protein coupled receptor subtypes, NMU-R1 and NMU-R2, with a distinct expression pattern, have been identified to bind NMU. NMU-R1 is expressed primarily in the peripheral nervous system, while NMU-R2 is mainly found in the central nervous system. Neuromedin S, a 36 amino-acid neuropeptide that shares a conserved C-terminal heptapeptide sequence with NMU, is a highly potent and selective NMU-R2 agonist. Pharmacological studies have shown that both NMU and NMS inhibit food intake and reduce body weight, and that NMU increases energy expenditure.


Pssm-ID: 320261 [Multi-domain]  Cd Length: 298  Bit Score: 38.28  E-value: 4.08e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQK-PISLAGCGTQMFFFVTLGSTDCFLLAV 121
Cdd:cd15133  15 VVGNVLTCLVIARHKAMRTPTNYYLFSLAVSDLLVLLLGMPLELYELWQNYPfLLGSGGCYFKTFLFETVCLASILNVTA 94
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*
gi 22128953 122 MAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLTAL 166
Cdd:cd15133  95 LSVERYIAVVHPLAARTCSTRPRVTRVLGCVWGVSMLCALPNTSL 139
7tmA_CysLTR1 cd15158
cysteinyl leukotriene receptor 1, member of the class A family of seven-transmembrane G ...
117-255 4.20e-03

cysteinyl leukotriene receptor 1, member of the class A family of seven-transmembrane G protein-coupled receptors; Cysteinyl leukotrienes (LTC4, LTD4, and LTE4) are the most potent inflammatory lipid mediators that play an important role in human asthma. They are synthesized in the leucocytes (cells of immune system) from arachidonic acid by the actions of 5-lipoxygenase and induce bronchial constriction through G protein-coupled receptors, CysLTR1 and CysLTR2. Activation of CysLTR1 by LTD4 induces airway smooth muscle contraction and proliferation, eosinophil migration, and damage to the lung tissue. They belong to the class A GPCR superfamily, which all have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320286 [Multi-domain]  Cd Length: 285  Bit Score: 38.19  E-value: 4.20e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 117 FLLAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWslaLFLSLQLTALIFTLPfcgHDQEINHFLCDVPPVLRLACAD 196
Cdd:cd15158  89 YFMTAMSFTRFLAIVFPVQNLNLVTVKKARIVCVGIW---IFVTLTSSPFLMSGS---HDTETNKTKCFEPPQSNQQLTK 162
                        90       100       110       120       130
                ....*....|....*....|....*....|....*....|....*....|....*....
gi 22128953 197 IHVHQAVLYVVGILVltvPFLLICISYVFIASTILRMRSAEGRQRAFSTCSSHLTVVLL 255
Cdd:cd15158 163 LLVLNYISLVVGFII---PFLVILICYAMIIRTLLKNTMKARKQQSSRKKAIRMIIIVL 218
7tmA_Beta_AR cd15058
beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane ...
42-229 4.26e-03

beta adrenergic receptors (adrenoceptors), member of the class A family of seven-transmembrane G protein-coupled receptors; The beta adrenergic receptor (beta adrenoceptor), also known as beta AR, is activated by hormone adrenaline (epinephrine) and plays important roles in regulating cardiac function and heart rate, as well as pulmonary physiology. The human heart contains three subtypes of the beta AR: beta-1 AR, beta-2 AR, and beta-3 AR. Beta-1 AR and beta-2 AR, which expressed at about a ratio of 70:30, are the major subtypes involved in modulating cardiac contractility and heart rate by positively stimulating the G(s) protein-adenylate cyclase-cAMP-PKA signaling pathway. In contrast, beta-3 AR produces negative inotropic effects by activating inhibitory G(i) proteins. The aberrant expression of beta-ARs can lead to cardiac dysfunction such as arrhythmias or heart failure. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320186 [Multi-domain]  Cd Length: 305  Bit Score: 38.20  E-value: 4.26e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  42 ILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCG--TQMFFFVTLGSTDCflL 119
Cdd:cd15058  14 IVVGNLLVIIAIARTSRLQTMTNIFITSLACADLVMGLLVVPLGATIVVTGKWQLGNFWCElwTSVDVLCVTASIET--L 91
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 120 AVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSlalflslqLTALIFTLPFCGHDQEINH---FLCDVPPvlrlACAD 196
Cdd:cd15058  92 CVIAVDRYIAITRPLRYQVLLTKRRARVIVCVVWI--------VSALVSFVPIMNQWWRANDpeaNDCYQDP----TCCD 159
                       170       180       190
                ....*....|....*....|....*....|....*
gi 22128953 197 IHVHQAVLYVVGILVLTVPFLLICISY--VFIAST 229
Cdd:cd15058 160 FRTNMAYAIASSVVSFYIPLLIMIFVYarVFLIAT 194
7tmA_GnRHR-like cd15195
gonadotropin-releasing hormone and adipokinetic hormone receptors, member of the class A ...
43-301 4.37e-03

gonadotropin-releasing hormone and adipokinetic hormone receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Gonadotropin-releasing hormone (GnRH) and adipokinetic hormone (AKH) receptors share strong sequence homology to each other, suggesting that they have a common evolutionary origin. GnRHR, also known as luteinizing hormone releasing hormone receptor (LHRHR), plays an central role in vertebrate reproductive function; its activation by binding to GnRH leads to the release of follicle stimulating hormone (FSH) and luteinizing hormone (LH) from the pituitary gland. Adipokinetic hormone (AKH) is a lipid-mobilizing hormone that is involved in control of insect metabolism. Generally, AKH behaves as a typical stress hormone by mobilizing lipids, carbohydrates and/or certain amino acids such as proline. Thus, it utilizes the body's energy reserves to fight the immediate stress problems and subdue processes that are less important. Although AKH is known to responsible for regulating the energy metabolism during insect flying, it is also found in insects that have lost its functional wings and predominantly walk for their locomotion. Both GnRH and AKH receptors are members of the class A of the seven-transmembrane, G-protein coupled receptor (GPCR) superfamily.


Pssm-ID: 320323 [Multi-domain]  Cd Length: 293  Bit Score: 38.15  E-value: 4.37e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLmlsNIFGAQKPISLAG---CGTQMFF--FVTLGSTdcF 117
Cdd:cd15195  15 AAGNLTVLIQLFRRRRAKSHIQILIMHLALADLMVTFFNMPM---DAVWNYTVEWLAGdlmCRVMMFLkqFGMYLSS--F 89
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 118 LLAVMAYDRYVAICHPLhySLIMTKKLCVQMVMGSWSLALFLSLQlTALIFTlpfcghdqeinhflcdvppVLRLACADI 197
Cdd:cd15195  90 MLVVIALDRVFAILSPL--SANQARKRVKIMLTVAWVLSALCSIP-QSFIFS-------------------VLRKMPEQP 147
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 198 HVHQAVLY--------------VVGILVLTVPFLLICISYVFIASTILRM----------------RSAEGRQRAFSTCS 247
Cdd:cd15195 148 GFHQCVDFgsaptkkqerlyyfFTMILSFVIPLIITVTCYLLILFEISKMakrardtpisnrrrsrTNSLERARMRTLRM 227
                       250       260       270       280       290       300
                ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 22128953 248 SHLTVVLL-----QYGCCSLVYLRPRSSTSEDEDRQIALVYTFVT--PLLNPLIYTLRNKD 301
Cdd:cd15195 228 TALIVLTFivcwgPYYVLGLWYWFDKESIKNLPPALSHIMFLLGYlnPCLHPIIYGVFMKE 288
7tmA_NOFQ_opioid_R cd15092
nociceptin/orphanin FQ peptide receptor, member of the class A family of seven-transmembrane G ...
43-161 5.01e-03

nociceptin/orphanin FQ peptide receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The nociceptin (NOP) receptor binds nociceptin or orphanin FQ, a 17 amino acid endogenous neuropeptide. The NOP receptor is involved in the modulation of various brain activities including instinctive and emotional behaviors. The opioid receptor family is composed of four major subtypes: mu (MOP), delta (DOP), kappa (KOP) opioid receptors, and the nociceptin/orphanin FQ peptide receptor (NOP). They are distributed widely in the central nervous system and respond to classic alkaloid opiates, such as morphine and heroin, as well as to endogenous peptide ligands, which include dynorphins, enkephalins, endorphins, endomorphins, and nociceptin. Opioid receptors are coupled to inhibitory G proteins of the G(i/o) family and involved in regulating a variety of physiological functions such as pain, addiction, mood, stress, epileptic seizure, and obesity, among many others.


Pssm-ID: 320220 [Multi-domain]  Cd Length: 279  Bit Score: 37.92  E-value: 5.01e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTdVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15092  15 LVGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLL-TLPFQGTDIFLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAM 93
                        90       100       110
                ....*....|....*....|....*....|....*....
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15092  94 SVDRYVAICHPIKALDVRTPHKAKVVNVCIWALASVVGV 132
7tmA_MC2R_ACTH_R cd15350
melanocortin receptor subtype 2, also called adrenocorticotropic hormone receptor, member of ...
46-172 6.43e-03

melanocortin receptor subtype 2, also called adrenocorticotropic hormone receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The melanocortin receptor (MCR) subfamily is a member of the class A family of seven-transmembrane G-protein coupled receptors. MCRs bind a group of pituitary peptide hormones known as melanocortins, which include adrenocorticotropic hormone (ACTH) and the different isoforms of melanocyte-stimulating hormones. There are five known subtypes of the MCR subfamily. MC1R is involved in regulating skin pigmentation and hair color. ACTH (adrenocorticotropic hormone) is the only endogenous ligand for MC2R, which shows low sequence similarity with other melanocortin receptors. Mutations in MC2R cause familial glucocorticoid deficiency type 1, in which patients have elevated plasma ACTH and low cortisol levels. MC3R is expressed in many parts of the brain and peripheral tissues and involved in the regulation of energy homeostasis. MC4R is expressed primarily in the central nervous system and involved in both eating behavior and sexual function. MC5R is widely expressed in peripheral tissues and is mainly involved in the regulation of exocrine gland function.


Pssm-ID: 320472 [Multi-domain]  Cd Length: 270  Bit Score: 37.45  E-value: 6.43e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  46 NAAIIWVVCTHSALHTPMYFFLSSLSvleIFYTTDVVPLMLSNIFgaqkpISLAGCG----------------TQMFFFV 109
Cdd:cd15350  18 NLLVLVAVIKNKNLHSPMYFFICSLA---VSDMLGSLYKTLENIL-----IILADMGylnrrgpfetklddimDSLFCLS 89
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 22128953 110 TLGSTdcFLLAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSL--------ALFLSLQLTALIFTLPF 172
Cdd:cd15350  90 LLGSI--FSILAIAADRYITIFHALRYHNIMTMRRTLVILAIIWTFcggsgilmILFFHFVATVICFTVLF 158
7tmA_D1B_dopamine_R cd15319
D1B (or D5) subtype dopamine receptor, member of the class A family of seven-transmembrane G ...
66-161 6.51e-03

D1B (or D5) subtype dopamine receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; Dopamine receptors are members of the class A G protein-coupled receptors that are involved in many neurological processes in the central nervous system (CNS). The neurotransmitter dopamine is the primary endogenous agonist for dopamine receptors. Dopamine receptors consist of at least five subtypes: D1, D2, D3, D4, and D5. The D1 and D5 subtypes are members of the D1-like family of dopamine receptors, whereas the D2, D3 and D4 subtypes are members of the D2-like family. The D1-like family receptors are coupled to G proteins of the G(s) family, which activate adenylate cyclase, causing cAMP formation and activation of protein kinase A. Dopamine receptors are major therapeutic targets for neurological and psychiatric disorders such as drug abuse, depression, schizophrenia, or Parkinson's disease.


Pssm-ID: 320442 [Multi-domain]  Cd Length: 317  Bit Score: 37.63  E-value: 6.51e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  66 FLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISlAGCGTQMFFFVTLGSTDCFLLAVMAYDRYVAICHPLHYSLIMTKKLC 145
Cdd:cd15319  39 FIVSLAVSDLFVALLVMPWKAVAEVAGYWPFG-AFCDVWVAFDIMCSTASILNLCVISVDRYWAISSPFRYERKMTQRVA 117
                        90
                ....*....|....*.
gi 22128953 146 VQMVMGSWSLALFLSL 161
Cdd:cd15319 118 LVMISVAWTLSVLISF 133
7tmA_SSTR1 cd15970
somatostatin receptor type 1, member of the class A family of seven-transmembrane G ...
43-234 7.89e-03

somatostatin receptor type 1, member of the class A family of seven-transmembrane G protein-coupled receptors; G protein-coupled somatostatin receptors (SSTRs) are composed of five distinct subtypes (SSTR1-5) that display strong sequence similarity with opioid receptors. All five receptor subtypes bind the natural somatostatin (somatotropin release inhibiting factor), a polypeptide hormone that regulates a wide variety of physiological functions such as neurotransmission, cell proliferation, contractility of smooth muscle cells, and endocrine signaling as well as inhibition of the release of many secondary hormones. SSTR1 is coupled to a Na/H exchanger, voltage-dependent calcium channels, and AMPA/kainate glutamate channels. SSTR1 is expressed in the normal human pituitary and in nearly half of all pituitary adenoma subtypes.


Pssm-ID: 320636 [Multi-domain]  Cd Length: 276  Bit Score: 37.20  E-value: 7.89e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  43 LCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVvPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLAVM 122
Cdd:cd15970  15 LCGNSMVIYVILRYAKMKTATNIYILNLAIADELLMLSV-PFLVTSTLLRHWPFGSLLCRLVLSVDAINMFTSIYCLTVL 93
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 123 AYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLQLtaLIFTLPFCGHDQEInhflcdvppvlrlACADIHVHQA 202
Cdd:cd15970  94 SIDRYIAVVHPIKAARYRRPTVAKMVNLGVWVFSILVILPI--IIFSNTAPNSDGSV-------------ACNMQMPEPS 158
                       170       180       190
                ....*....|....*....|....*....|....*...
gi 22128953 203 VLYVVGILVLT------VPFLLICISYVFIastILRMR 234
Cdd:cd15970 159 QRWLAVFVVYTflmgflLPVIAICLCYILI---IVKMR 193
7tmA_LHCGR cd15359
luteinizing hormone-choriogonadotropin receptor, member of the class A family of ...
99-226 8.14e-03

luteinizing hormone-choriogonadotropin receptor, member of the class A family of seven-transmembrane G protein-coupled receptors; The glycoprotein hormone receptors are seven transmembrane domain receptors with a very large extracellular N-terminal domain containing many leucine-rich repeats responsible for hormone recognition and binding. The glycoprotein hormone family includes the three gonadotropins: luteinizing hormone (LH), follicle-stimulating hormone (FSH), chorionic gonadotropin (CG), and a pituitary thyroid-stimulating hormone (TSH). The glycoprotein hormones exert their biological functions by interacting with their cognate GPCRs. Both LH and CG bind to the same receptor, the luteinizing hormone-choriogonadotropin receptor (LHCGR); FSH binds to FSH-R and TSH to TSH-R. LHCGR is expressed predominantly in the ovary and testis, and plays an essential role in sexual development and reproductive processes. LHCGR couples primarily to the G(s)-protein and activates adenylate cyclase, thereby promoting cAMP production.


Pssm-ID: 320481 [Multi-domain]  Cd Length: 275  Bit Score: 37.15  E-value: 8.14e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  99 AGCGTQMFFFVTLGSTDCFLLAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSLqltaliftLPFCGHDQE 178
Cdd:cd15359  78 SGCSTAGFFTVFASELSVYTLTVITLERWHTITYAMQLDRKLRLRHAILIMLGGWVFSLLIAV--------LPLVGVSNY 149
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
gi 22128953 179 INHFLCdVPpvlrlacADIHVHQAVLYVVGILVLTV-PFLLICISYVFI 226
Cdd:cd15359 150 MKVSIC-LP-------MDIETLLSQAYILLILVLNViAFLVICACYIKI 190
7tmA_GPR162 cd15906
G protein-coupled receptor 162, member of the class A family of seven-transmembrane G ...
41-176 8.39e-03

G protein-coupled receptor 162, member of the class A family of seven-transmembrane G protein-coupled receptors; This subgroup represents the orphan G-protein coupled receptor 162 (GPR162), also called A-2 or GRCA, with unknown endogenous ligand and function. Phylogenetic analysis indicates that GPR162 and GPR153 share a common evolutionary ancestor due to a gene duplication event. Although categorized as members of the rhodopsin-like class A GPCRs, both GPR162 and GPR153 contain HRM-motif instead of the highly conserved Asp-Arg-Tyr (DRY) motif found in the third transmembrane helix (TM3) of class A receptors and important for efficient G protein-coupled signal transduction. Moreover, the LPxF motif, a variant of NPxxY motif that plays a crucial role during receptor activation, is found at the end of TM7 in GPR162 and GPR153. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.


Pssm-ID: 320572  Cd Length: 315  Bit Score: 37.26  E-value: 8.39e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTdvVPLMLSNIFGAQKPIS-----LAGCGTQMFFFVTLGSTD 115
Cdd:cd15906  13 LALLANGWIILSIAAKQQKHKPLELLLCFLAGTHILMAA--VPLTTFAVVQLRRKHSgydwnESICKVFVSTYYTLALAT 90
                        90       100       110       120       130       140
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 22128953 116 CFLLAVMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSlqltalifTLPFCG-HD 176
Cdd:cd15906  91 CFTVASLSYHRMWMVRWPVNYRLSNAKKQALHAVMGIWMVSFILS--------TLPSIGwHN 144
7tmA_Cannabinoid_R cd15099
cannabinoid receptors, member of the class A family of seven-transmembrane G protein-coupled ...
46-306 9.22e-03

cannabinoid receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Cannabinoid receptors belong to the class A G-protein coupled receptor superfamily. Two types of cannabinoid receptors, CB1 and CB2, have been identified so far. They are activated by naturally occurring endocannabinoids, cannabis plant-derived cannabinoids such as tetrahydrocannabinol, or synthetic cannabinoids. The CB receptors are involved in the various physiological processes such as appetite, mood, memory, and pain sensation. CB1 receptor is expressed predominantly in central and peripheral neurons, while CB2 receptor is found mainly in the immune system.


Pssm-ID: 320227 [Multi-domain]  Cd Length: 281  Bit Score: 37.12  E-value: 9.22e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  46 NAAIIWVVCTHSALH-TPMYFFLSSLSVLE----IFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGStdcflLA 120
Cdd:cd15099  18 NILVLLTILSSTALRrRPSYLFIGSLALADmlasVIFTISFLDFHVFHQRDSRNLFLFKLGGVTMAFTASVGS-----LL 92
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKklcvqmvmGSWSLALFLSLQLTALIFTLPFCGHDQEinhflcdvppVLRLACADIHVH 200
Cdd:cd15099  93 LTALDRYLCIYQPSNYKLLVTR--------TRAKVAILLMWCVTIIISFLPLMGWRCK----------TWDSPCSRLFPY 154
                       170       180       190       200       210       220       230       240
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 201 QAVLYVVG-ILVLTVPFLLICISYVFI-------------ASTILRMRSAEGRQRAFSTCSSHLTVVLLQYGCC-----S 261
Cdd:cd15099 155 IDRHYLASwTGLQLVLLFLIIYAYPYIlwkahrheanmggPKLGRQQVKGQARMRMDIRLAKTLSLILLVLAICwlpvlA 234
                       250       260       270       280
                ....*....|....*....|....*....|....*....|....*..
gi 22128953 262 LVYLRPRSSTSEDEDRQIALVYT--FVTPLLNPLIYTLRNKDVKGAL 306
Cdd:cd15099 235 FMLVDVRVTLTNKQKRMFAFCSMlcLVNSCVNPIIYALRSRELRGAM 281
7tmA_NPFFR cd15207
neuropeptide FF receptors, member of the class A family of seven-transmembrane G ...
42-230 9.78e-03

neuropeptide FF receptors, member of the class A family of seven-transmembrane G protein-coupled receptors; Neuropeptide FF (NPFF) is a mammalian octapeptide that belongs to a family of neuropeptides containing an RF-amide motif at their C-terminus that have been implicated in a wide range of physiological functions in the brain including pain sensitivity, insulin release, food intake, memory, blood pressure, and opioid-induced tolerance and hyperalgesia. The effects of these peptides are mediated through neuropeptide FF1 and FF2 receptors (NPFF1-R and NPFF2-R) which are predominantly expressed in the brain. NPFF induces pro-nociceptive effects, mainly through the NPFF1-R, and anti-nociceptive effects, mainly through the NPFF2-R. NPFF has been shown to inhibit adenylate cyclase via the Gi protein coupled to NPFF1-R.


Pssm-ID: 320335 [Multi-domain]  Cd Length: 291  Bit Score: 37.22  E-value: 9.78e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  42 ILC--GNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPL-MLSNIFGAQkPISLAGCGTQMFFFVTLGSTDCFL 118
Cdd:cd15207  12 LLCvvGNVLVCLVVAKNPRMRTVTNYFILNLAVSDLLVGVFCMPFtLVDNILTGW-PFGDVMCKLSPLVQGVSVAASVFT 90
                        90       100       110       120       130       140       150       160
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953 119 LAVMAYDRYVAICHPLHYSliMTKKLCVQMVMGSWSLALFLSLQLTALIftlpfcgHDQEINHFLCDVPPVLRLACADIH 198
Cdd:cd15207  91 LVAIAVDRYRAVVHPTEPK--LTNRQAFVIIVAIWVLALAIMIPQALVL-------EVKEYQFFRGQTVHICVEFWPSDE 161
                       170       180       190
                ....*....|....*....|....*....|..
gi 22128953 199 VHQAVLYVVGILVLTVPFLLICISYVFIASTI 230
Cdd:cd15207 162 YRKAYTTSLFVLCYVAPLLIIAVLYVRIGYRL 193
7tmA_alpha1D_AR cd15327
alpha-1 adrenergic receptors subtype D, member of the class A family of seven-transmembrane G ...
41-161 9.97e-03

alpha-1 adrenergic receptors subtype D, member of the class A family of seven-transmembrane G protein-coupled receptors; The alpha-1 adrenergic receptors (or adrenoceptors) are a subfamily of the class A rhodopsin-like GPCRs that share a common architecture of seven transmembrane helices. This subfamily consists of three highly homologous receptor subtypes that primarily mediate smooth muscle contraction: alpha-1A, alpha-1B, and alpha-1D. Activation of alpha-1 receptors by catecholamines such as norepinephrine and epinephrine couples to the G(q) protein, which then activates the phospholipase C pathway, leading to an increase in IP3 and calcium. Consequently, the elevation of intracellular calcium concentration leads to vasoconstriction in smooth muscle of blood vessels. In addition, activation of alpha-1 receptors by phenylpropanolamine (PPA) produces anorexia and may induce appetite suppression in rats.


Pssm-ID: 320450 [Multi-domain]  Cd Length: 261  Bit Score: 36.81  E-value: 9.97e-03
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 22128953  41 MILCGNAAIIWVVCTHSALHTPMYFFLSSLSVLEIFYTTDVVPLMLSNIFGAQKPISLAGCGTQMFFFVTLGSTDCFLLA 120
Cdd:cd15327  13 MAIVGNILVILSVACNRHLQTVTNYFIVNLAIADLLLSTTVLPFSATLEVLGFWAFGRVFCDIWAAVDVLCCTASILSLC 92
                        90       100       110       120
                ....*....|....*....|....*....|....*....|.
gi 22128953 121 VMAYDRYVAICHPLHYSLIMTKKLCVQMVMGSWSLALFLSL 161
Cdd:cd15327  93 VISVDRYVGVKHSLKYPTIMTERKAGVILVLLWVSSMVISI 133
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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