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Conserved domains on  [gi|46275839|ref|NP_660310|]
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succinate dehydrogenase assembly factor 4, mitochondrial precursor [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1674 pfam07896
Protein of unknown function (DUF1674); The members of this family are sequences derived from ...
 59-108 9.44e-21

Protein of unknown function (DUF1674); The members of this family are sequences derived from hypothetical eukaryotic and bacterial proteins. The region in question is approximately 60 residues long.


:

Pssm-ID: 429724  Cd Length: 50  Bit Score: 78.13  E-value: 9.44e-21
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 46275839    59 DAPEDSHLEKEPLEKFPDDVNPVTKEKGGPRGPEPTRYGDWERKGRCIDF 108
Cdd:pfam07896   1 EAEERPAAAAKPAPEFEGDVNPKTGEIGGPKGPEPTRYGDWEYKGRVSDF 50
 
Name Accession Description Interval E-value
DUF1674 pfam07896
Protein of unknown function (DUF1674); The members of this family are sequences derived from ...
 59-108 9.44e-21

Protein of unknown function (DUF1674); The members of this family are sequences derived from hypothetical eukaryotic and bacterial proteins. The region in question is approximately 60 residues long.


Pssm-ID: 429724  Cd Length: 50  Bit Score: 78.13  E-value: 9.44e-21
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 46275839    59 DAPEDSHLEKEPLEKFPDDVNPVTKEKGGPRGPEPTRYGDWERKGRCIDF 108
Cdd:pfam07896   1 EAEERPAAAAKPAPEFEGDVNPKTGEIGGPKGPEPTRYGDWEYKGRVSDF 50
COG5508 COG5508
Uncharacterized conserved protein, DUF1674 domain [Function unknown];
67-108 3.16e-14

Uncharacterized conserved protein, DUF1674 domain [Function unknown];


Pssm-ID: 444259  Cd Length: 61  Bit Score: 61.50  E-value: 3.16e-14
                        10        20        30        40
                ....*....|....*....|....*....|....*....|..
gi 46275839  67 EKEPLEKFPDDVNPVTKEKGGPRGPEPTRYGDWERKGRCIDF 108
Cdd:COG5508  20 EAEARRAAAEADAELPKEIGGRDGPEPTRYGDWEKKGRAIDF 61
 
Name Accession Description Interval E-value
DUF1674 pfam07896
Protein of unknown function (DUF1674); The members of this family are sequences derived from ...
 59-108 9.44e-21

Protein of unknown function (DUF1674); The members of this family are sequences derived from hypothetical eukaryotic and bacterial proteins. The region in question is approximately 60 residues long.


Pssm-ID: 429724  Cd Length: 50  Bit Score: 78.13  E-value: 9.44e-21
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|
gi 46275839    59 DAPEDSHLEKEPLEKFPDDVNPVTKEKGGPRGPEPTRYGDWERKGRCIDF 108
Cdd:pfam07896   1 EAEERPAAAAKPAPEFEGDVNPKTGEIGGPKGPEPTRYGDWEYKGRVSDF 50
COG5508 COG5508
Uncharacterized conserved protein, DUF1674 domain [Function unknown];
67-108 3.16e-14

Uncharacterized conserved protein, DUF1674 domain [Function unknown];


Pssm-ID: 444259  Cd Length: 61  Bit Score: 61.50  E-value: 3.16e-14
                        10        20        30        40
                ....*....|....*....|....*....|....*....|..
gi 46275839  67 EKEPLEKFPDDVNPVTKEKGGPRGPEPTRYGDWERKGRCIDF 108
Cdd:COG5508  20 EAEARRAAAEADAELPKEIGGRDGPEPTRYGDWEKKGRAIDF 61
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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