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Conserved domains on  [gi|254553434|ref|NP_034345|]
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L-amino-acid oxidase precursor [Mus musculus]

Protein Classification

flavin monoamine oxidase family protein( domain architecture ID 11440890)

flavin monoamine oxidase family protein catalyzes the FAD-dependent oxidative deamination of biogenic and xenobiotic amines

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
76-502 4.67e-93

Monoamine oxidase [Amino acid transport and metabolism];


:

Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 293.75  E-value: 4.67e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434  76 MLSDAGHKVTILEADNRIGGRIFTFRDEKTGWIGELGAMRMPSSHRILHKLCRTLGLNLTQFTQYDENTWTEVHNVKLRn 155
Cdd:COG1231   25 ELRKAGLDVTVLEARDRVGGRVWTLRFGDDGLYAELGAMRIPPSHTNLLALARELGLPLEPFPNENGNALLYLGGKRVR- 103
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 156 yvvekmpeklgynlnNRERGHSPEDIYQmALNKAFKDLKAL--GCKKAMNKFNKHTLLEYLLEEGNL--SRPAVQLLGDV 231
Cdd:COG1231  104 ---------------AGEIAADLRGVAE-LLAKLLRALAAAldPWAHPAAELDRESLAEWLRRNGASpsARRLLGLLGAG 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 232 MSEEGFFYLSFAEALRAHACLSDRLRYSRIVGGWDLLPRALLSSLSGALLLNAPVVSITQGRNDVRVHIATSlhseKTLT 311
Cdd:COG1231  168 EYGADPDELSLLDLLRYAASAGGGAQQFRIVGGMDQLPRALAAELGDRIRLGAPVTRIRQDGDGVTVTTDDG----GTVR 243
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 312 ADVVLLTASGPALQRITFSPPLTRKRQEALRALHYVAASKVFLSFRRPFWHEEHIEGGHSNTDRPSRLIFYPA--QGEGS 389
Cdd:COG1231  244 ADAVIVTVPPSVLRRIEFDPPLPAAKRAAIQRLPYGAAIKVFLQFDRPFWEEDGLYGGISLTDLPIRQTWYPSngPDGGA 323
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 390 LLLASYTWSDAAAPFAGLSTDQTLRLVLQDVAALHGPVvfRLWDGRGVVKRWAEDPHSQGGFVVQPPlyGREAEDYD-WS 468
Cdd:COG1231  324 GVLLGYVGGDDARALAALSPEERVAAALEQLARIFGVY--AAEPVDYVSTDWGRDPWSRGAYAAAPP--GQLTAAGPaLA 399
                        410       420       430
                 ....*....|....*....|....*....|....*
gi 254553434 469 APFGRIYFAGEHTALP-HGWVETAVKSGLRAAVRI 502
Cdd:COG1231  400 EPDGRIHFAGEHTSDEwPGWVEGALESGERAAAEI 434
 
Name Accession Description Interval E-value
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
76-502 4.67e-93

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 293.75  E-value: 4.67e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434  76 MLSDAGHKVTILEADNRIGGRIFTFRDEKTGWIGELGAMRMPSSHRILHKLCRTLGLNLTQFTQYDENTWTEVHNVKLRn 155
Cdd:COG1231   25 ELRKAGLDVTVLEARDRVGGRVWTLRFGDDGLYAELGAMRIPPSHTNLLALARELGLPLEPFPNENGNALLYLGGKRVR- 103
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 156 yvvekmpeklgynlnNRERGHSPEDIYQmALNKAFKDLKAL--GCKKAMNKFNKHTLLEYLLEEGNL--SRPAVQLLGDV 231
Cdd:COG1231  104 ---------------AGEIAADLRGVAE-LLAKLLRALAAAldPWAHPAAELDRESLAEWLRRNGASpsARRLLGLLGAG 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 232 MSEEGFFYLSFAEALRAHACLSDRLRYSRIVGGWDLLPRALLSSLSGALLLNAPVVSITQGRNDVRVHIATSlhseKTLT 311
Cdd:COG1231  168 EYGADPDELSLLDLLRYAASAGGGAQQFRIVGGMDQLPRALAAELGDRIRLGAPVTRIRQDGDGVTVTTDDG----GTVR 243
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 312 ADVVLLTASGPALQRITFSPPLTRKRQEALRALHYVAASKVFLSFRRPFWHEEHIEGGHSNTDRPSRLIFYPA--QGEGS 389
Cdd:COG1231  244 ADAVIVTVPPSVLRRIEFDPPLPAAKRAAIQRLPYGAAIKVFLQFDRPFWEEDGLYGGISLTDLPIRQTWYPSngPDGGA 323
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 390 LLLASYTWSDAAAPFAGLSTDQTLRLVLQDVAALHGPVvfRLWDGRGVVKRWAEDPHSQGGFVVQPPlyGREAEDYD-WS 468
Cdd:COG1231  324 GVLLGYVGGDDARALAALSPEERVAAALEQLARIFGVY--AAEPVDYVSTDWGRDPWSRGAYAAAPP--GQLTAAGPaLA 399
                        410       420       430
                 ....*....|....*....|....*....|....*
gi 254553434 469 APFGRIYFAGEHTALP-HGWVETAVKSGLRAAVRI 502
Cdd:COG1231  400 EPDGRIHFAGEHTSDEwPGWVEGALESGERAAAEI 434
Amino_oxidase pfam01593
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ...
75-503 1.64e-79

Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.


Pssm-ID: 396255 [Multi-domain]  Cd Length: 446  Bit Score: 258.96  E-value: 1.64e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434   75 KMLSDAGHKVTILEADNRIGGRIFTFRDEktGWIGELGAMRMPSSHRILHKLCRTLGLNLTQFTQyDENTWTEVHNVKLR 154
Cdd:pfam01593   8 RELLRAGHDVTVLEARDRVGGRIRTVRDD--GFLIELGAMWFHGAQPPLLALLKELGLEDRLVLP-DPAPFYTVLFAGGR 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434  155 NY--VVEKMPEKLgynlnNRERGHSPEDIYQMALNKAFKDLKALGCkkAMNKFNKHTLLEYLLEEGNLSRPAVQLLGDVM 232
Cdd:pfam01593  85 RYpgDFRRVPAGW-----EGLLEFGRLLSIPEKLRLGLAALASDAL--DEFDLDDFSLAESLLFLGRRGPGDVEVWDRLI 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434  233 SEEGFFYLSFA--------EALRAHACLSDRLRYS-------RIVGGWDLLPRALLSSLSGAL-LLNAPVVSITQGRNDV 296
Cdd:pfam01593 158 DPELFAALPFAsgafagdpSELSAGLALPLLWALLgeggsllLPRGGLGALPDALAAQLLGGDvRLNTRVRSIDREGDGV 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434  297 RVHIATSlhseKTLTADVVLLTASGPALQRITFSPPLTRKRQEALRALHYVAASKVFLSFRRPFWHEE--HIEGGHSNTD 374
Cdd:pfam01593 238 TVTLTDG----EVIEADAVIVTVPLGVLKRILFTPPLPPEKARAIRNLGYGPVNKVHLEFDRKFWPDLglLGLLSELLTG 313
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434  375 RPSRLIFYPAQGEG----SLLLASYTW-SDAAAPFAGLSTDQTLRLVLQDVAALHGPVVfrLWDGRGVVKRWAEDPHSQG 449
Cdd:pfam01593 314 LGTAFSWLTFPNRAppgkGLLLLVYVGpGDRARELEGLSDEELLQAVLRDLRKLFGEEA--PEPLRVLVSDWHTDPWPRG 391
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 254553434  450 GFVVQPPLYGREAEDYDWSAPFGRIYFAGEHTALPH-GWVETAVKSGLRAAVRIN 503
Cdd:pfam01593 392 SYSLPQYGPGHDDYRPLARTPDPGLFFAGEHTSTGYpGTVEGAIESGRRAARAVL 446
PLN02328 PLN02328
lysine-specific histone demethylase 1 homolog
286-502 1.29e-14

lysine-specific histone demethylase 1 homolog


Pssm-ID: 215187 [Multi-domain]  Cd Length: 808  Bit Score: 77.34  E-value: 1.29e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 286 VVSITQGRNDVRVHIatslhSEKTLTADVVLLTASGPALQR--ITFSPPLTRKRQEALRALHYVAASKVFLSFRRPFWHE 363
Cdd:PLN02328 455 VESIRYGVDGVIVYA-----GGQEFHGDMVLCTVPLGVLKKgsIEFYPELPQRKKDAIQRLGYGLLNKVALLFPYNFWGG 529
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 364 EHIEGGHSNTDRPSR---LIFYP-AQGEGSLLLASYTWSDAAAPFAGLSTDQTLRLVLQDVAALHGPVVFRLWDG-RGVV 438
Cdd:PLN02328 530 EIDTFGHLTEDPSMRgefFLFYSySSVSGGPLLIALVAGDAAVKFETLSPVESVKRVLQILRGIFHPKGIVVPDPvQAVC 609
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 254553434 439 KRWAEDPHSQGGFVVQPplYGREAEDYDW---SAPFGRIYFAGEHT-----ALPHGwvetAVKSGLRAAVRI 502
Cdd:PLN02328 610 TRWGKDCFTYGSYSYVA--VGSSGDDYDIlaeSVGDGRVFFAGEATnkqypATMHG----AFLSGMREAANI 675
 
Name Accession Description Interval E-value
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
76-502 4.67e-93

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 293.75  E-value: 4.67e-93
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434  76 MLSDAGHKVTILEADNRIGGRIFTFRDEKTGWIGELGAMRMPSSHRILHKLCRTLGLNLTQFTQYDENTWTEVHNVKLRn 155
Cdd:COG1231   25 ELRKAGLDVTVLEARDRVGGRVWTLRFGDDGLYAELGAMRIPPSHTNLLALARELGLPLEPFPNENGNALLYLGGKRVR- 103
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 156 yvvekmpeklgynlnNRERGHSPEDIYQmALNKAFKDLKAL--GCKKAMNKFNKHTLLEYLLEEGNL--SRPAVQLLGDV 231
Cdd:COG1231  104 ---------------AGEIAADLRGVAE-LLAKLLRALAAAldPWAHPAAELDRESLAEWLRRNGASpsARRLLGLLGAG 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 232 MSEEGFFYLSFAEALRAHACLSDRLRYSRIVGGWDLLPRALLSSLSGALLLNAPVVSITQGRNDVRVHIATSlhseKTLT 311
Cdd:COG1231  168 EYGADPDELSLLDLLRYAASAGGGAQQFRIVGGMDQLPRALAAELGDRIRLGAPVTRIRQDGDGVTVTTDDG----GTVR 243
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 312 ADVVLLTASGPALQRITFSPPLTRKRQEALRALHYVAASKVFLSFRRPFWHEEHIEGGHSNTDRPSRLIFYPA--QGEGS 389
Cdd:COG1231  244 ADAVIVTVPPSVLRRIEFDPPLPAAKRAAIQRLPYGAAIKVFLQFDRPFWEEDGLYGGISLTDLPIRQTWYPSngPDGGA 323
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 390 LLLASYTWSDAAAPFAGLSTDQTLRLVLQDVAALHGPVvfRLWDGRGVVKRWAEDPHSQGGFVVQPPlyGREAEDYD-WS 468
Cdd:COG1231  324 GVLLGYVGGDDARALAALSPEERVAAALEQLARIFGVY--AAEPVDYVSTDWGRDPWSRGAYAAAPP--GQLTAAGPaLA 399
                        410       420       430
                 ....*....|....*....|....*....|....*
gi 254553434 469 APFGRIYFAGEHTALP-HGWVETAVKSGLRAAVRI 502
Cdd:COG1231  400 EPDGRIHFAGEHTSDEwPGWVEGALESGERAAAEI 434
Amino_oxidase pfam01593
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ...
75-503 1.64e-79

Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.


Pssm-ID: 396255 [Multi-domain]  Cd Length: 446  Bit Score: 258.96  E-value: 1.64e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434   75 KMLSDAGHKVTILEADNRIGGRIFTFRDEktGWIGELGAMRMPSSHRILHKLCRTLGLNLTQFTQyDENTWTEVHNVKLR 154
Cdd:pfam01593   8 RELLRAGHDVTVLEARDRVGGRIRTVRDD--GFLIELGAMWFHGAQPPLLALLKELGLEDRLVLP-DPAPFYTVLFAGGR 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434  155 NY--VVEKMPEKLgynlnNRERGHSPEDIYQMALNKAFKDLKALGCkkAMNKFNKHTLLEYLLEEGNLSRPAVQLLGDVM 232
Cdd:pfam01593  85 RYpgDFRRVPAGW-----EGLLEFGRLLSIPEKLRLGLAALASDAL--DEFDLDDFSLAESLLFLGRRGPGDVEVWDRLI 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434  233 SEEGFFYLSFA--------EALRAHACLSDRLRYS-------RIVGGWDLLPRALLSSLSGAL-LLNAPVVSITQGRNDV 296
Cdd:pfam01593 158 DPELFAALPFAsgafagdpSELSAGLALPLLWALLgeggsllLPRGGLGALPDALAAQLLGGDvRLNTRVRSIDREGDGV 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434  297 RVHIATSlhseKTLTADVVLLTASGPALQRITFSPPLTRKRQEALRALHYVAASKVFLSFRRPFWHEE--HIEGGHSNTD 374
Cdd:pfam01593 238 TVTLTDG----EVIEADAVIVTVPLGVLKRILFTPPLPPEKARAIRNLGYGPVNKVHLEFDRKFWPDLglLGLLSELLTG 313
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434  375 RPSRLIFYPAQGEG----SLLLASYTW-SDAAAPFAGLSTDQTLRLVLQDVAALHGPVVfrLWDGRGVVKRWAEDPHSQG 449
Cdd:pfam01593 314 LGTAFSWLTFPNRAppgkGLLLLVYVGpGDRARELEGLSDEELLQAVLRDLRKLFGEEA--PEPLRVLVSDWHTDPWPRG 391
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 254553434  450 GFVVQPPLYGREAEDYDWSAPFGRIYFAGEHTALPH-GWVETAVKSGLRAAVRIN 503
Cdd:pfam01593 392 SYSLPQYGPGHDDYRPLARTPDPGLFFAGEHTSTGYpGTVEGAIESGRRAARAVL 446
PLN02328 PLN02328
lysine-specific histone demethylase 1 homolog
286-502 1.29e-14

lysine-specific histone demethylase 1 homolog


Pssm-ID: 215187 [Multi-domain]  Cd Length: 808  Bit Score: 77.34  E-value: 1.29e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 286 VVSITQGRNDVRVHIatslhSEKTLTADVVLLTASGPALQR--ITFSPPLTRKRQEALRALHYVAASKVFLSFRRPFWHE 363
Cdd:PLN02328 455 VESIRYGVDGVIVYA-----GGQEFHGDMVLCTVPLGVLKKgsIEFYPELPQRKKDAIQRLGYGLLNKVALLFPYNFWGG 529
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 364 EHIEGGHSNTDRPSR---LIFYP-AQGEGSLLLASYTWSDAAAPFAGLSTDQTLRLVLQDVAALHGPVVFRLWDG-RGVV 438
Cdd:PLN02328 530 EIDTFGHLTEDPSMRgefFLFYSySSVSGGPLLIALVAGDAAVKFETLSPVESVKRVLQILRGIFHPKGIVVPDPvQAVC 609
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 254553434 439 KRWAEDPHSQGGFVVQPplYGREAEDYDW---SAPFGRIYFAGEHT-----ALPHGwvetAVKSGLRAAVRI 502
Cdd:PLN02328 610 TRWGKDCFTYGSYSYVA--VGSSGDDYDIlaeSVGDGRVFFAGEATnkqypATMHG----AFLSGMREAANI 675
PLN03000 PLN03000
amine oxidase
81-499 1.66e-12

amine oxidase


Pssm-ID: 178578 [Multi-domain]  Cd Length: 881  Bit Score: 70.82  E-value: 1.66e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434  81 GHKVTILEADNRIGGRIFTFRDE--KTGWIGELGAMRMPSSH-RILHKLCRTLGLNLtqftqydentwtevHNVKlrnyv 157
Cdd:PLN03000 207 GFKVTVLEGRKRPGGRVYTKKMEanRVGAAADLGGSVLTGTLgNPLGIIARQLGSSL--------------YKVR----- 267
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 158 vEKMPEklgYNLNNRerghsPEDI-YQMALNKAFKDL--KALGCKKAMNKFNKHTLLEYLLEEGNlsrpavQLLG-DVMS 233
Cdd:PLN03000 268 -DKCPL---YRVDGK-----PVDPdVDLKVEVAFNQLldKASKLRQLMGDVSMDVSLGAALETFR------QVSGnDVAT 332
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 234 EE-GFFYLSFAEALRAHACLSDRLRysriVGGWD------------LLPrALLSSLSGALLLNAPVV------SITQGRN 294
Cdd:PLN03000 333 EEmGLFNWHLANLEYANAGLVSKLS----LAFWDqddpydmggdhcFLP-GGNGRLVQALAENVPILyektvqTIRYGSN 407
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 295 DVRVhiatsLHSEKTLTADVVLLTASGPALQR--ITFSPPLTRKRQEALRALHYVAASKVFLSFRRPFWHEEHIEGGHSn 372
Cdd:PLN03000 408 GVKV-----IAGNQVYEGDMVLCTVPLGVLKNgsIKFVPELPQRKLDCIKRLGFGLLNKVAMLFPYVFWSTDLDTFGHL- 481
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 373 TDRPSR----LIFYP-AQGEGSLLLASYTWSDAAAPFAGLSTDQTLRLVLQDVAALHGPVVFRLWDG-RGVVKRWAEDPH 446
Cdd:PLN03000 482 TEDPNYrgefFLFYSyAPVAGGPLLIALVAGEAAHKFETMPPTDAVTRVLHILRGIYEPQGINVPDPlQTVCTRWGGDPF 561
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 254553434 447 SQGGFvvQPPLYGREAEDYDWSAPF---GRIYFAGEHT-----ALPHGwvetAVKSGLRAA 499
Cdd:PLN03000 562 SLGSY--SNVAVGASGDDYDILAESvgdGRLFFAGEATtrrypATMHG----AFVTGLREA 616
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
67-502 4.29e-12

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 68.71  E-value: 4.29e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434  67 GvaglvaakmLSDAGHKVTILEADNRIGGRIFTFRDEktGWIGELGAMRMPSSHRILHKLCRTLGLnltqftqydENTWT 146
Cdd:COG1232   19 R---------LAKAGHEVTVLEASDRVGGLIRTVEVD--GFRIDRGPHSFLTRDPEVLELLRELGL---------GDELV 78
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 147 EVHNVKLRNYV---VEKMPEK-------------------LGYNLNNRERGHsPEDIYQM--------ALNKAFK----- 191
Cdd:COG1232   79 WPNTRKSYIYYggkLHPLPQGplallrspllslagklralLELLAPRRPPGE-DESLAEFvrrrfgreVYERLVEplleg 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 192 ----DLKALGCKKAMNKfnkhtLLEYLLEEGNLSRPAVQLLGDVMSEEGFFYL-----SFAEALrAHACLSDRLRYsriv 262
Cdd:COG1232  158 vyagDPDELSADWAFPR-----LKRLELEHGSLIKGALALRKGAKAGEVFGYLrgglgTLVEAL-AEALEAGEIRL---- 227
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 263 ggwdllprallsslsgalllNAPVVSITQGRNDVRVHIAtslhSEKTLTADVVLLTASGPALQRITfsPPLTRKRQEALR 342
Cdd:COG1232  228 --------------------GTRVTAIEREGGGWRVTTS----DGETIEADAVVSATPAPALARLL--APLPPEVAAALA 281
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 343 ALHYVAASKVFLSFRRPFWHEEHIEGG--HSNTDRP-SRLIFY-----PAQGEGSLLLASYTWSDAAAPFAGLSTDQTLR 414
Cdd:COG1232  282 GIPYASVAVVALGFDRPDLPPPDGFGWlvPRDEGVPiLAVTFSsnkwpHRAPDGKVLLRLEVGGAGDPELWQLSDEELVA 361
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 415 LVLQDVAALHG----PVVFRlwdgrgvVKRWaedPHSQggfvvqpPLYGREAEDY-----DWSAPFGRIYFAG---EHTA 482
Cdd:COG1232  362 LALADLRKLLGidaePVDTR-------VVRW---PKAY-------PQYTVGHLERvaairEALAALPGLYLAGrayDGVG 424
                        490       500
                 ....*....|....*....|
gi 254553434 483 LPHgwvetAVKSGLRAAVRI 502
Cdd:COG1232  425 LPD-----CIRSGREAAERI 439
PLN02529 PLN02529
lysine-specific histone demethylase 1
307-524 2.20e-10

lysine-specific histone demethylase 1


Pssm-ID: 178144 [Multi-domain]  Cd Length: 738  Bit Score: 63.76  E-value: 2.20e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 307 EKTLTADVVLLTASGPALQR--ITFSPPLTRKRQEALRALHYVAASKVFLSFRRPFWHEEHIEGG---HSNTDRPSRLIF 381
Cdd:PLN02529 391 SQVFQADMVLCTVPLGVLKKrtIRFEPELPRRKLAAIDRLGFGLLNKVAMVFPSVFWGEELDTFGclnESSNKRGEFFLF 470
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 382 YPAQG-EGSLLLASYTWSDAAAPFAGLSTDQTLRLVLQDVAALHGPVVFRLWDG-RGVVKRWAEDPHSQGGFvvQPPLYG 459
Cdd:PLN02529 471 YGYHTvSGGPALVALVAGEAAQRFENTDPSTLLHRVLSVLRGIYNPKGINVPDPiQTICTRWGSDPLSYGSY--SHVRVQ 548
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 254553434 460 REAEDYDWSAPF--GRIYFAGE-----HTALPHGwvetAVKSGLRAAVRINNNYGYGEVDPQMMEHAYAEAN 524
Cdd:PLN02529 549 SSGSDYDILAESvsGRLFFAGEattrqYPATMHG----AFLSGLREASRILHVARSQQSNSRKSMQRNSGVS 616
PLN02268 PLN02268
probable polyamine oxidase
75-499 4.18e-10

probable polyamine oxidase


Pssm-ID: 177909 [Multi-domain]  Cd Length: 435  Bit Score: 62.40  E-value: 4.18e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434  75 KMLSDAGHKVTILEADNRIGGRIFTfrDEKTGWIGELGA--MRMPSSHRILHKLCRTLGLNLTQFTqyDENTWTEVHNV- 151
Cdd:PLN02268  17 RALHDASFKVTLLESRDRIGGRVHT--DYSFGFPVDMGAswLHGVCNENPLAPLIGRLGLPLYRTS--GDNSVLYDHDLe 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 152 ------KLRNYVVEKMPEKLGYNL------NNRERGHSPEDiyqMALNKAFKdlkalgckkAMNKFNKHTLLEYLleegn 219
Cdd:PLN02268  93 syalfdMDGNQVPQELVTKVGETFerileeTEKVRDEHEED---MSLLQAIS---------IVLERHPELRLEGL----- 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 220 lsrpAVQLLGdvmseegfFYLSFAEALRAhaclSDRLRYSriVGGWD---LL------------PRALLSSLSGALLLNA 284
Cdd:PLN02268 156 ----AHEVLQ--------WYLCRMEGWFA----ADADTIS--LKSWDqeeLLegghglmvrgydPVINTLAKGLDIRLNH 217
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 285 PVVSITQGRNDVRVhiatSLHSEKTLTADVVLLTASGPALQ--RITFSPPLTRKRQEALRALHYVAASKVFLSFRRPFWH 362
Cdd:PLN02268 218 RVTKIVRRYNGVKV----TVEDGTTFVADAAIIAVPLGVLKanIIKFEPELPEWKEEAISDLGVGIENKIALHFDSVFWP 293
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 363 EEHIEGG--------------HSNTDRPSrLIFYPAqgeGSLLLASYTWSD-AAAPFAGLStdqtLRLVLQDVAAlhgPV 427
Cdd:PLN02268 294 NVEFLGVvaptsygcsyflnlHKATGHPV-LVYMPA---GRLARDIEKLSDeAAANFAMSQ----LKKMLPDATE---PV 362
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 254553434 428 VFrlwdgrgVVKRWAEDPHSQGGFVVQPplYGREAEDYD-WSAPFGRIYFAGEHTALPH-GWVETAVKSGLRAA 499
Cdd:PLN02268 363 QY-------LVSRWGSDPNSLGCYSYDL--VGKPHDLYErLRAPVDNLFFAGEATSSDFpGSVHGAYSTGVMAA 427
PLN02976 PLN02976
amine oxidase
81-502 3.75e-08

amine oxidase


Pssm-ID: 215527 [Multi-domain]  Cd Length: 1713  Bit Score: 56.80  E-value: 3.75e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434   81 GHKVTILEADNRIGGRIFTFRDEK-----------TGWIGELGAMRM--PSShrilhKLCRTLGLNLTQFTQ----YDEN 143
Cdd:PLN02976  716 GFSVTVLEARSRIGGRVYTDRSSLsvpvdlgasiiTGVEADVATERRpdPSS-----LICAQLGLELTVLNSdcplYDVV 790
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434  144 TWTEV-----------HNVKLRNYVV---------EKMP--EKLGYNLNNRERGHSPEDIYQMALNKAFKDL-------- 193
Cdd:PLN02976  791 TGEKVpadldealeaeYNSLLDDMVLlvaqkgehaMKMSleDGLEYALKRRRMPRPGVDIDETELGNAADDLydsastgv 870
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434  194 --KALGC-----------KKAMNKFNKHtlLEY----LLEEgnLSRPavqllgdvMSEEGFFYLSFAEalrAHaCLsdrl 256
Cdd:PLN02976  871 dgGHCEKeskedvlspleRRVMNWHFAH--LEYgcaaLLKE--VSLP--------YWNQDDVYGGFGG---AH-CM---- 930
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434  257 rysrIVGGWDLLPRalLSSLSGALLLNAPVVSITQGRNDVR--------VHIATSLHSEktLTADVVLLTASGPAL--QR 326
Cdd:PLN02976  931 ----IKGGYSNVVE--SLAEGLDIHLNHVVTDVSYGSKDAGasgssrkkVKVSTSNGSE--FLGDAVLITVPLGCLkaET 1002
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434  327 ITFSPPLTRKRQEALRALHYVAASKVFLSFRRPFWHE--EHIEGGHSNTD-RPSRLIFYPAQGE-GSLLLASYTWSDAAA 402
Cdd:PLN02976 1003 IKFSPPLPDWKYSSIQRLGFGVLNKVVLEFPEVFWDDsvDYFGATAEETDlRGQCFMFWNVKKTvGAPVLIALVVGKAAI 1082
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434  403 PFAGLSTDQ-------TLRLVLQDvAALHGPVVfrlwdgrGVVKRWAEDPHSQGGFVvqpplY---GREAEDYDWsapFG 472
Cdd:PLN02976 1083 DGQSMSSSDhvnhalmVLRKLFGE-ALVPDPVA-------SVVTDWGRDPFSYGAYS-----YvaiGASGEDYDI---LG 1146
                         490       500       510
                  ....*....|....*....|....*....|....*.
gi 254553434  473 R-----IYFAGEHTALPH-GWVETAVKSGLRAAVRI 502
Cdd:PLN02976 1147 RpvencLFFAGEATCKEHpDTVGGAMMSGLREAVRI 1182
PLN02676 PLN02676
polyamine oxidase
75-499 5.92e-08

polyamine oxidase


Pssm-ID: 215362 [Multi-domain]  Cd Length: 487  Bit Score: 55.49  E-value: 5.92e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434  75 KMLSDAGHK-VTILEADNRIGGRIFtfRDEKTGWIGELGA-----MRMPSSHRILhKLCRTLGLNlTQFTQYD---ENTW 145
Cdd:PLN02676  43 KTLSEAGIEdILILEATDRIGGRMR--KANFAGVSVELGAnwvegVGGPESNPIW-ELANKLKLR-TFYSDFDnlsSNIY 118
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 146 TEVHNVKLRNYVVEKMP-----EKLGYNLNNRERGHSPEDIYQMALNKAFKDLKALGCKKAMNKFNKhtllEYLLEEGnl 220
Cdd:PLN02676 119 KQDGGLYPKKVVQKSMKvadasDEFGENLSISLSAKKAVDISILTAQRLFGQVPKTPLEMVIDYYNY----DYEFAEP-- 192
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 221 srPAVQLLGDVMSEEGFfyLSFAEALrahACLSDRLRYSRIVG--GWDLLPRALLSSLSGALLLNAPVVSITQGRNDVRV 298
Cdd:PLN02676 193 --PRVTSLKNTEPNPTF--VDFGEDE---YFVADPRGYESLVYylAEQFLSTKSGKITDPRLKLNKVVREISYSKNGVTV 265
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 299 hiatSLHSEKTLTADVVLLTASGPALQR--ITFSPPLTRKRQEALRALHYVAASKVFLSFRRPFW------------HE- 363
Cdd:PLN02676 266 ----KTEDGSVYRAKYVIVSVSLGVLQSdlIKFKPPLPDWKIEAIYQFDMAVYTKIFLKFPYKFWpsgpgtefflyaHEr 341
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 364 -------EHIEGGhsntdrpsrlifYPaqgeGS-LLLASYTwSDAAAPFAGLSTDQTLRLVLQDVAALHGPVVFRLWDgr 435
Cdd:PLN02676 342 rgyypfwQHLENE------------YP----GSnVLFVTVT-DEESRRIEQQPDSETKAEIMEVLRKMFGPNIPEATD-- 402
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 254553434 436 GVVKRWAEDPHSQGGFVVQPPLYGREAEDyDWSAPFGRIYFAGEHTALPH-GWVETAVKSGLRAA 499
Cdd:PLN02676 403 ILVPRWWSNRFFKGSYSNWPIGVSRYEFD-QIRAPVGRVYFTGEHTSEKYnGYVHGAYLAGIDTA 466
COG3349 COG3349
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ...
67-499 7.34e-05

Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];


Pssm-ID: 442577 [Multi-domain]  Cd Length: 445  Bit Score: 45.62  E-value: 7.34e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434  67 GVaglvaakmLSDAGHKVTILEADNRIGGRIFTFRDEKTGWIGELGAMRMPSSHRILHKLCRTLGL--NLT-----QFTQ 139
Cdd:COG3349   20 VE--------LAEAGFRVTLLEARPRLGGRARSFPDPDTGLPIDNGQHVLLGCYRNTLDLLRRIGAadNLVgpeplQFPL 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 140 YDENTWTevhnvkLRNyvvEKMPEKLG---YNLnnRERGHSPEDiyQMALNKAFKDLKALGCKKAMNkfnkHTLLEYLLE 216
Cdd:COG3349   92 PGGRRWT------LRA---PRLPAPLHllrALL--RAPGLSLAD--RLALLRLLTACRERRWRELDD----ISVADWLRR 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 217 EGnLSRPAVQLLGDVMS--------EEG-------FFYLSFaeALRAHAC--------LSDRL-----RYSRIVGGwDLL 268
Cdd:COG3349  155 HG-QSPRLIRRLWEPLLlaalntppEQAsarlaltVLRETL--LAGPAASdllvprgpLSELFvdpalAYLEARGG-EVR 230
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 269 PRallsslsgalllnAPVVSITQGRNDVRVHIatsLHSEKTLTADVVLLTASGPALQRITfsPPLTRKRQ-EALRALHYV 347
Cdd:COG3349  231 LG-------------TRVRALEFDGGRVTGLV---LADGETVPADAVVLAVPPEVAARLL--PELARLPElGLLAPLEYS 292
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 348 AASKVFLSFRRPF--WHEEHIEGghsnTDRPSRLIFYPAQ---GEGSLLlaSYTWSdAAAPFAGLSTDQTLRLVLQDVAA 422
Cdd:COG3349  293 PIVNVHLWLDRPVtlGPPPFAGL----VGSTSQWVFDRGAgdgGQGGVL--SVVIS-AADRLLDLSREELAAEVWAELAA 365
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 254553434 423 LHGPVvfrlwdgrgvvkRWAEDPHSQ------GGFVVQPPLYGR--EAEdydwsAPFGRIYFAGEHTALPHGW-VETAVK 493
Cdd:COG3349  366 LLPAA------------REALPVWSRvvrekrATFAATPGSDRLrpGAR-----TPIPNLFLAGDWTATGLPAtMEGAVR 428

                 ....*.
gi 254553434 494 SGLRAA 499
Cdd:COG3349  429 SGRRAA 434
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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