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Concise Results
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janus kinase and microtubule-interacting protein 3 isoform g [Homo sapiens]
Protein Classification
List of domain hits
Name
Accession
Description
Interval
E-value
JAKMIP_CC3
pfam16034 JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP ...
429-625
2.63e-87
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP family (Janus kinase and microtubule-interacting proteins) and is predicted to be a coiled coil. It interacts with the Janus family kinases Tyk2 and Jak1.
Pssm-ID: 464986 [Multi-domain]
Cd Length: 199
Bit Score: 275.60
E-value: 2.63e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 429 ERDKL L R F RKQR K K MA K LPKP - V VVETFFGYDEEAS LE S DG SS V SY Q TDRTD Q TP C TPD D DL E EG M A K EE T ELRFRQLT M 507
Cdd:pfam16034 1 ERDKL I R A RKQR R K EK K KKLR d M VVETFFGYDEEAS VD S ET SS L SY N TDRTD S TP A TPD E DL D EG V A A EE A ELRFRQLT R 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 508 EYQALQRAYALLQEQ V GGTLDAERE V KTREQLQAE VQ RAQ A RIEDLE K ALA EQ GQD M KW I EEKQAL Y RRNQELVEKI KQ M 587
Cdd:pfam16034 81 EYQALQRAYALLQEQ S GGTLDAERE A KTREQLQAE LR RAQ S RIEDLE S ALA QK GQD S KW V EEKQAL I RRNQELVEKI RI M 160
170 180 190
....*....|....*....|....*....|....*...
gi 1973449194 588 E T EE A RL RH E V QDARDQNELLEFRILELEERER K SPAI 625
Cdd:pfam16034 161 E Q EE G RL KN E I QDARDQNELLEFRILELEERER R SPAI 198
Smc super family
cl34174 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
26-619
3.70e-08
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
COG1196 :Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 57.25
E-value: 3.70e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 26 ED L R A K L TDIQIELQQEKSKVSKV E R E KNQELRQVR E H E QHKTAVL L T EL KTK L H E EK m K EL QAVRET l LRQHE AEL L R V 105
Cdd:COG1196 223 KE L E A E L LLLKLRELEAELEELEA E L E ELEAELEEL E A E LAELEAE L E EL RLE L E E LE - L EL EEAQAE - EYELL AEL A R L 300
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 106 IKIKDNENQ R LQA L LSA L RD ggpekvktvl L S E AKE E AKKGF E VEKVKMQQEIS EL KG A KRQV EEA LTLVIQ A DKIKAAE 185
Cdd:COG1196 301 EQDIARLEE R RRE L EER L EE ---------- L E E ELA E LEEEL E ELEEELEELEE EL EE A EEEL EEA EAELAE A EEALLEA 370
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 186 IRS vyhlh QE E ITRIKK E CER E IRRLMEEIKFKDRAVFV LE RELGVQAGHAQ RL QLQK E A L D E Q L SQVR E ADR hpgsprr 265
Cdd:COG1196 371 EAE ----- LA E AEEELE E LAE E LLEALRAAAELAAQLEE LE EAEEALLERLE RL EEEL E E L E E A L AELE E EEE ------- 438
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 266 elphaagagdasdhsgsp E QQLDEKD A RRFQLKIA E LSAIIRK L EDRNALLSEERNEL L KRVR E AESQYKPL L DKNKRLS 345
Cdd:COG1196 439 ------------------ E EEEALEE A AEEEAELE E EEEALLE L LAELLEEAALLEAA L AELL E ELAEAAAR L LLLLEAE 500
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 346 RKN E DLSHALRRMENK lkfvtqeniem RQRA G IIRRPSS L NDLDQS qd EREVDFLK L QIVE Q QNLIDELSKTLETAG Y V K 425
Cdd:COG1196 501 ADY E GFLEGVKAALLL ----------- AGLR G LAGAVAV L IGVEAA -- YEAALEAA L AAAL Q NIVVEDDEVAAAAIE Y L K 567
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 426 S - VLE R DKL L RFR K Q R KKM A KLPKPVVVETFFGY D EE AS LESDGSSVS Y QTDR T DQ - TPCTPDDDLEEGMAKEETEL R F R 503
Cdd:COG1196 568 A a KAG R ATF L PLD K I R ARA A LAAALARGAIGAAV D LV AS DLREADARY Y VLGD T LL g RTLVAARLEAALRRAVTLAG R L R 647
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 504 QL T M E YQALQRAYA L LQEQVGGT L D A ER E VKTREQLQ AE VQRAQARIEDLEKALA E QGQDMKWIE E KQA L YRRNQ E LVEK 583
Cdd:COG1196 648 EV T L E GEGGSAGGS L TGGSRREL L A A LL E AEAELEEL AE RLAEEELELEEALLAE E EEERELAEA E EER L EEELE E EALE 727
570 580 590
....*....|....*....|....*....|....*.
gi 1973449194 584 IKQMETE E AR L RHEVQDARDQN E LLEFRIL E LEER E 619
Cdd:COG1196 728 EQLEAER E EL L EELLEEEELLE E EALEELP E PPDL E 763
Smc super family
cl34174 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
495-813
2.79e-06
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
COG1196 :Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 51.09
E-value: 2.79e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 495 K E ET EL RFRQ L TMEYQA L QRAYAL L QEQVG - GTLDA E REVKTREQ L Q AE VQRAQARI E D LE KA L A E - Q GQDMKWIE E KQA 572
Cdd:COG1196 220 E E LK EL EAEL L LLKLRE L EAELEE L EAELE e LEAEL E ELEAELAE L E AE LEELRLEL E E LE LE L E E a Q AEEYELLA E LAR 299
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 573 L YRRNQE L V E KIKQM E TEEAR L RH E VQDARDQN E L LE FRIL ELEE RER kspaisfhhtpfvdgksplqvyc EAE GVTDIV 652
Cdd:COG1196 300 L EQDIAR L E E RRREL E ERLEE L EE E LAELEEEL E E LE EELE ELEE ELE ----------------------- EAE EELEEA 356
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 653 V AEL MKKLDI L GDNAVSNLTN EE QVVVIQARTVLT L AEKIR L HFA lsptlsafppkggkw L QQI EE T E A AL QRKMVD LE S 732
Cdd:COG1196 357 E AEL AEAEEA L LEAEAELAEA EE ELEELAEELLEA L RAAAE L AAQ --------------- L EEL EE A E E AL LERLER LE E 421
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 733 E K - EL FSKQKGYLD EE LDYRKQALDQ A NK EA GAKVA E LLSE E EREK L KVAVEQWKRQVMSE L R E RDAQIL R ERME L LQL A 811
Cdd:COG1196 422 E L e EL EEALAELEE EE EEEEEALEEA A EE EA ELEEE E EALL E LLAE L LEEAALLEAALAEL L E E LAEAAA R LLLL L EAE A 501
..
gi 1973449194 812 QQ 813
Cdd:COG1196 502 DY 503
Name
Accession
Description
Interval
E-value
JAKMIP_CC3
pfam16034 JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP ...
429-625
2.63e-87
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP family (Janus kinase and microtubule-interacting proteins) and is predicted to be a coiled coil. It interacts with the Janus family kinases Tyk2 and Jak1.
Pssm-ID: 464986 [Multi-domain]
Cd Length: 199
Bit Score: 275.60
E-value: 2.63e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 429 ERDKL L R F RKQR K K MA K LPKP - V VVETFFGYDEEAS LE S DG SS V SY Q TDRTD Q TP C TPD D DL E EG M A K EE T ELRFRQLT M 507
Cdd:pfam16034 1 ERDKL I R A RKQR R K EK K KKLR d M VVETFFGYDEEAS VD S ET SS L SY N TDRTD S TP A TPD E DL D EG V A A EE A ELRFRQLT R 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 508 EYQALQRAYALLQEQ V GGTLDAERE V KTREQLQAE VQ RAQ A RIEDLE K ALA EQ GQD M KW I EEKQAL Y RRNQELVEKI KQ M 587
Cdd:pfam16034 81 EYQALQRAYALLQEQ S GGTLDAERE A KTREQLQAE LR RAQ S RIEDLE S ALA QK GQD S KW V EEKQAL I RRNQELVEKI RI M 160
170 180 190
....*....|....*....|....*....|....*...
gi 1973449194 588 E T EE A RL RH E V QDARDQNELLEFRILELEERER K SPAI 625
Cdd:pfam16034 161 E Q EE G RL KN E I QDARDQNELLEFRILELEERER R SPAI 198
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
26-619
3.70e-08
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 57.25
E-value: 3.70e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 26 ED L R A K L TDIQIELQQEKSKVSKV E R E KNQELRQVR E H E QHKTAVL L T EL KTK L H E EK m K EL QAVRET l LRQHE AEL L R V 105
Cdd:COG1196 223 KE L E A E L LLLKLRELEAELEELEA E L E ELEAELEEL E A E LAELEAE L E EL RLE L E E LE - L EL EEAQAE - EYELL AEL A R L 300
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 106 IKIKDNENQ R LQA L LSA L RD ggpekvktvl L S E AKE E AKKGF E VEKVKMQQEIS EL KG A KRQV EEA LTLVIQ A DKIKAAE 185
Cdd:COG1196 301 EQDIARLEE R RRE L EER L EE ---------- L E E ELA E LEEEL E ELEEELEELEE EL EE A EEEL EEA EAELAE A EEALLEA 370
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 186 IRS vyhlh QE E ITRIKK E CER E IRRLMEEIKFKDRAVFV LE RELGVQAGHAQ RL QLQK E A L D E Q L SQVR E ADR hpgsprr 265
Cdd:COG1196 371 EAE ----- LA E AEEELE E LAE E LLEALRAAAELAAQLEE LE EAEEALLERLE RL EEEL E E L E E A L AELE E EEE ------- 438
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 266 elphaagagdasdhsgsp E QQLDEKD A RRFQLKIA E LSAIIRK L EDRNALLSEERNEL L KRVR E AESQYKPL L DKNKRLS 345
Cdd:COG1196 439 ------------------ E EEEALEE A AEEEAELE E EEEALLE L LAELLEEAALLEAA L AELL E ELAEAAAR L LLLLEAE 500
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 346 RKN E DLSHALRRMENK lkfvtqeniem RQRA G IIRRPSS L NDLDQS qd EREVDFLK L QIVE Q QNLIDELSKTLETAG Y V K 425
Cdd:COG1196 501 ADY E GFLEGVKAALLL ----------- AGLR G LAGAVAV L IGVEAA -- YEAALEAA L AAAL Q NIVVEDDEVAAAAIE Y L K 567
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 426 S - VLE R DKL L RFR K Q R KKM A KLPKPVVVETFFGY D EE AS LESDGSSVS Y QTDR T DQ - TPCTPDDDLEEGMAKEETEL R F R 503
Cdd:COG1196 568 A a KAG R ATF L PLD K I R ARA A LAAALARGAIGAAV D LV AS DLREADARY Y VLGD T LL g RTLVAARLEAALRRAVTLAG R L R 647
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 504 QL T M E YQALQRAYA L LQEQVGGT L D A ER E VKTREQLQ AE VQRAQARIEDLEKALA E QGQDMKWIE E KQA L YRRNQ E LVEK 583
Cdd:COG1196 648 EV T L E GEGGSAGGS L TGGSRREL L A A LL E AEAELEEL AE RLAEEELELEEALLAE E EEERELAEA E EER L EEELE E EALE 727
570 580 590
....*....|....*....|....*....|....*.
gi 1973449194 584 IKQMETE E AR L RHEVQDARDQN E LLEFRIL E LEER E 619
Cdd:COG1196 728 EQLEAER E EL L EELLEEEELLE E EALEELP E PPDL E 763
SMC_prok_A
TIGR02169 chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ...
45-830
1.87e-06
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain]
Cd Length: 1164
Bit Score: 51.99
E-value: 1.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 45 KVSKVER EK N Q E L RQV R EHEQHKTAVL lt E L KTKLH E EKMK EL QAVR E T L L RQ H EA e LL R VIKIKDN E NQR L QALL S A L R 124
Cdd:TIGR02169 188 RLDLIID EK R Q Q L ERL R REREKAERYQ -- A L LKEKR E YEGY EL LKEK E A L E RQ K EA - IE R QLASLEE E LEK L TEEI S E L E 264
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 125 DGGP E KVK tv LL S E AKEEA K KGF E V E KVKMQQE I S EL KG ---- AK R QVE E ALTLVIQ A DK i KA A EIRSVYHLHQE EI TRI 200
Cdd:TIGR02169 265 KRLE E IEQ -- LL E E LNKKI K DLG E E E QLRVKEK I G EL EA eias LE R SIA E KERELED A EE - RL A KLEAEIDKLLA EI EEL 341
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 201 KK E C E R E IR R --- L M EE IKFKDRAVFV L ER EL GVQAGHAQRLQLQKEALD E Q L SQVRE adrhpgsprrelphaagag DAS 277
Cdd:TIGR02169 342 ER E I E E E RK R rdk L T EE YAELKEELED L RA EL EEVDKEFAETRDELKDYR E K L EKLKR ------------------- EIN 402
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 278 DHSGSPEQQLD E K da R R FQLKI A E L S A I I RKL E DRNAL L S EE RNELLKRVREA E SQYKP L LDKNKRLSRKNE DL SHALR R 357
Cdd:TIGR02169 403 ELKRELDRLQE E L -- Q R LSEEL A D L N A A I AGI E AKINE L E EE KEDKALEIKKQ E WKLEQ L AADLSKYEQELY DL KEEYD R 480
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 358 M E NK L KFVTQ E NI E MRQR A GIIRRPSSLNDLDQSQDEREVDFLKLQIVEQQNLIDELSKTL E T A G ------- Y V KSVLER 430
Cdd:TIGR02169 481 V E KE L SKLQR E LA E AEAQ A RASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAI E V A A gnrlnnv V V EDDAVA 560
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 431 DKLLRFR K Q RK ---------- KM AKLPKPVVVETFF G YDEE A S -- L E S D --- GSSVS Y QTDR T DQT pctpd D D L E EG mak 495
Cdd:TIGR02169 561 KEAIELL K R RK agratflpln KM RDERRDLSILSED G VIGF A V dl V E F D pky EPAFK Y VFGD T LVV ----- E D I E AA --- 632
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 496 EETELRF R QL T M E YQALQRAY A L lqeq V GG TLDAEREVKTREQLQ AE V QR AQA R I E D L EKA L AEQGQDMKW IE ek QA L YR 575
Cdd:TIGR02169 633 RRLMGKY R MV T L E GELFEKSG A M ---- T GG SRAPRGGILFSRSEP AE L QR LRE R L E G L KRE L SSLQSELRR IE -- NR L DE 706
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 576 RN QEL VEKIKQMETE E ARLRHEV Q DARDQN E L LE FRILE L EER E RKSPAISFHHTPFVDGKSP L QVYCEA -- E GVT D IVV 653
Cdd:TIGR02169 707 LS QEL SDASRKIGEI E KEIEQLE Q EEEKLK E R LE ELEED L SSL E QEIENVKSELKELEARIEE L EEDLHK le E ALN D LEA 786
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 654 AELMKKLDILGDNAVS nlt N EE Q V VV I Q AR TVLTLAEKI RL HFA lsptlsafppkggkw LQQI E ETEAA LQ RKMV DL ESE 733
Cdd:TIGR02169 787 RLSHSRIPEIQAELSK --- L EE E V SR I E AR LREIEQKLN RL TLE --------------- KEYL E KEIQE LQ EQRI DL KEQ 848
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 734 KELFS K QK gyld E E L DYR K QA L DQANK E AG A KVAE L ls E EEREK LK VAVEQWKR Q v MS EL RER daqi LR E RMELLQLAQQ 813
Cdd:TIGR02169 849 IKSIE K EI ---- E N L NGK K EE L EEELE E LE A ALRD L -- E SRLGD LK KERDELEA Q - LR EL ERK ---- IE E LEAQIEKKRK 917
810
....*....|....*..
gi 1973449194 814 R IK EL EERI EA QKRQIK 830
Cdd:TIGR02169 918 R LS EL KAKL EA LEEELS 934
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
495-813
2.79e-06
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 51.09
E-value: 2.79e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 495 K E ET EL RFRQ L TMEYQA L QRAYAL L QEQVG - GTLDA E REVKTREQ L Q AE VQRAQARI E D LE KA L A E - Q GQDMKWIE E KQA 572
Cdd:COG1196 220 E E LK EL EAEL L LLKLRE L EAELEE L EAELE e LEAEL E ELEAELAE L E AE LEELRLEL E E LE LE L E E a Q AEEYELLA E LAR 299
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 573 L YRRNQE L V E KIKQM E TEEAR L RH E VQDARDQN E L LE FRIL ELEE RER kspaisfhhtpfvdgksplqvyc EAE GVTDIV 652
Cdd:COG1196 300 L EQDIAR L E E RRREL E ERLEE L EE E LAELEEEL E E LE EELE ELEE ELE ----------------------- EAE EELEEA 356
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 653 V AEL MKKLDI L GDNAVSNLTN EE QVVVIQARTVLT L AEKIR L HFA lsptlsafppkggkw L QQI EE T E A AL QRKMVD LE S 732
Cdd:COG1196 357 E AEL AEAEEA L LEAEAELAEA EE ELEELAEELLEA L RAAAE L AAQ --------------- L EEL EE A E E AL LERLER LE E 421
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 733 E K - EL FSKQKGYLD EE LDYRKQALDQ A NK EA GAKVA E LLSE E EREK L KVAVEQWKRQVMSE L R E RDAQIL R ERME L LQL A 811
Cdd:COG1196 422 E L e EL EEALAELEE EE EEEEEALEEA A EE EA ELEEE E EALL E LLAE L LEEAALLEAALAEL L E E LAEAAA R LLLL L EAE A 501
..
gi 1973449194 812 QQ 813
Cdd:COG1196 502 DY 503
PTZ00121
PTZ00121 MAEBL; Provisional
50-621
6.88e-04
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 43.59
E-value: 6.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 50 E RE K NQEL R QVREHEQHKTAVLLT E LKTKLHEE K MKELQAVR E T ll RQHEA E LLRVIKIKD NE NQ R lqalls ALRDGGPE 129
Cdd:PTZ00121 1192 E LR K AEDA R KAEAARKAEEERKAE E ARKAEDAK K AEAVKKAE E A -- KKDAE E AKKAEEERN NE EI R ------ KFEEARMA 1263
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 130 KVKTVLLSEAK EEA K K GF E VE K VKMQQEIS E L K G A -- K RQVE EA ltlviqad K I KA A E IRSV yhlhq E E ITRIKK E CERE 207
Cdd:PTZ00121 1264 HFARRQAAIKA EEA R K AD E LK K AEEKKKAD E A K K A ee K KKAD EA -------- K K KA E E AKKA ----- D E AKKKAE E AKKK 1330
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 208 IRRLMEEIKFKDR A VFVLER E LGVQ A GH A QRLQLQK EA LDEQLSQVREADRHPGSPRR E LPH A AG A GDASDHSGSPEQQ L 287
Cdd:PTZ00121 1331 ADAAKKKAEEAKK A AEAAKA E AEAA A DE A EAAEEKA EA AEKKKEEAKKKADAAKKKAE E KKK A DE A KKKAEEDKKKADE L 1410
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 288 DEKD A RRFQLKI A ELS A IIR K LE D RNALLS EE RNELLKRVRE AE SQY K PLLD K N K RLSR K NE D LSHALRRMEN K LKFVTQ 367
Cdd:PTZ00121 1411 KKAA A AKKKADE A KKK A EEK K KA D EAKKKA EE AKKADEAKKK AE EAK K AEEA K K K AEEA K KA D EAKKKAEEAK K ADEAKK 1490
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 368 ENI E MRQR A GIIRRPSS ---- LNDLDQSQDEREV D fl KLQIV E QQNLI DE LS K TL E tagy V K SVL E RD K LLRFR K QRK K M 443
Cdd:PTZ00121 1491 KAE E AKKK A DEAKKAAE akkk ADEAKKAEEAKKA D -- EAKKA E EAKKA DE AK K AE E ---- K K KAD E LK K AEELK K AEE K K 1564
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 444 A klpkpvv V E TFFGYD E EASLESDGSSVSYQTDRTDQTPCTPDDDL E EG M AK EE TE l RFRQLTMEYQA L QR A YALLQEQV 523
Cdd:PTZ00121 1565 K ------- A E EAKKAE E DKNMALRKAEEAKKAEEARIEEVMKLYEE E KK M KA EE AK - KAEEAKIKAEE L KK A EEEKKKVE 1636
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 524 GGTLDAER E V K TR E Q L QAEVQRAQARIEDLE K ALA E --- QGQDM K WI EE K ----- Q AL YRRNQ E L -- V E KI K QM E T EE AR 593
Cdd:PTZ00121 1637 QLKKKEAE E K K KA E E L KKAEEENKIKAAEEA K KAE E dkk KAEEA K KA EE D ekkaa E AL KKEAE E A kk A E EL K KK E A EE KK 1716
570 580
....*....|....*....|....*...
gi 1973449194 594 LRH E VQD A RDQ N ELLEFRILELE E RER K 621
Cdd:PTZ00121 1717 KAE E LKK A EEE N KIKAEEAKKEA E EDK K 1744
COG4913
COG4913 Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
496-620
1.85e-03
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain]
Cd Length: 1089
Bit Score: 42.21
E-value: 1.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 496 E E T E LRFRQLTMEYQ AL QRAYAL LQE Q vggt LD A EREVKTREQLQAE V QR A QAR I ED LE KA L AEQGQDMKWI ---- E EKQ 571
Cdd:COG4913 620 A E L E EELAEAEERLE AL EAELDA LQE R ---- RE A LQRLAEYSWDEID V AS A ERE I AE LE AE L ERLDASSDDL aale E QLE 695
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1973449194 572 A L YRRNQ EL V E KIKQMET E EA RL RH E VQD A RDQNEL L EF R ILEL E ERE R 620
Cdd:COG4913 696 E L EAELE EL E E ELDELKG E IG RL EK E LEQ A EEELDE L QD R LEAA E DLA R 744
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
307-621
1.95e-03
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 41.97
E-value: 1.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 307 R KL E DRNA L LSEER N el L K R V ---- R E A E S Q Y K P L --- LD K NK R LSRKNED L SHA -------- L RRMENK L KFVTQ E NI E 371
Cdd:TIGR02168 173 R RK E TERK L ERTRE N -- L D R L edil N E L E R Q L K S L erq AE K AE R YKELKAE L REL elallvlr L EELREE L EELQE E LK E 250
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 372 MRQRAGIIRR psslndl DQSQD E REVDF L K L QIV E QQNL I D EL S K T L ETAGYVK S V LE RD K - L LR F R KQRKKMAKLPKPV 450
Cdd:TIGR02168 251 AEEELEELTA ------- ELQEL E EKLEE L R L EVS E LEEE I E EL Q K E L YALANEI S R LE QQ K q I LR E R LANLERQLEELEA 323
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 451 VV E TFFGYDE E ASL E SDGSSVSYQTDRTDQTPC t PDDDL E EGMAK EE T E L R FRQ L TMEYQA L QRAY A L L QE Q V ggtldae 530
Cdd:TIGR02168 324 QL E ELESKLD E LAE E LAELEEKLEELKEELESL - EAELE E LEAEL EE L E S R LEE L EEQLET L RSKV A Q L EL Q I ------- 395
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 531 revktr EQ L QA E VQ R AQ AR I E D LE KALAEQG Q DMKWIEE K QALYRR n Q EL VEKIKQM E T E EAR L RH E VQDARDQN E L L EF 610
Cdd:TIGR02168 396 ------ AS L NN E IE R LE AR L E R LE DRRERLQ Q EIEELLK K LEEAEL - K EL QAELEEL E E E LEE L QE E LERLEEAL E E L RE 468
330
....*....|.
gi 1973449194 611 RIL E L E ERERK 621
Cdd:TIGR02168 469 ELE E A E QALDA 479
Name
Accession
Description
Interval
E-value
JAKMIP_CC3
pfam16034 JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP ...
429-625
2.63e-87
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP family (Janus kinase and microtubule-interacting proteins) and is predicted to be a coiled coil. It interacts with the Janus family kinases Tyk2 and Jak1.
Pssm-ID: 464986 [Multi-domain]
Cd Length: 199
Bit Score: 275.60
E-value: 2.63e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 429 ERDKL L R F RKQR K K MA K LPKP - V VVETFFGYDEEAS LE S DG SS V SY Q TDRTD Q TP C TPD D DL E EG M A K EE T ELRFRQLT M 507
Cdd:pfam16034 1 ERDKL I R A RKQR R K EK K KKLR d M VVETFFGYDEEAS VD S ET SS L SY N TDRTD S TP A TPD E DL D EG V A A EE A ELRFRQLT R 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 508 EYQALQRAYALLQEQ V GGTLDAERE V KTREQLQAE VQ RAQ A RIEDLE K ALA EQ GQD M KW I EEKQAL Y RRNQELVEKI KQ M 587
Cdd:pfam16034 81 EYQALQRAYALLQEQ S GGTLDAERE A KTREQLQAE LR RAQ S RIEDLE S ALA QK GQD S KW V EEKQAL I RRNQELVEKI RI M 160
170 180 190
....*....|....*....|....*....|....*...
gi 1973449194 588 E T EE A RL RH E V QDARDQNELLEFRILELEERER K SPAI 625
Cdd:pfam16034 161 E Q EE G RL KN E I QDARDQNELLEFRILELEERER R SPAI 198
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
26-619
3.70e-08
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 57.25
E-value: 3.70e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 26 ED L R A K L TDIQIELQQEKSKVSKV E R E KNQELRQVR E H E QHKTAVL L T EL KTK L H E EK m K EL QAVRET l LRQHE AEL L R V 105
Cdd:COG1196 223 KE L E A E L LLLKLRELEAELEELEA E L E ELEAELEEL E A E LAELEAE L E EL RLE L E E LE - L EL EEAQAE - EYELL AEL A R L 300
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 106 IKIKDNENQ R LQA L LSA L RD ggpekvktvl L S E AKE E AKKGF E VEKVKMQQEIS EL KG A KRQV EEA LTLVIQ A DKIKAAE 185
Cdd:COG1196 301 EQDIARLEE R RRE L EER L EE ---------- L E E ELA E LEEEL E ELEEELEELEE EL EE A EEEL EEA EAELAE A EEALLEA 370
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 186 IRS vyhlh QE E ITRIKK E CER E IRRLMEEIKFKDRAVFV LE RELGVQAGHAQ RL QLQK E A L D E Q L SQVR E ADR hpgsprr 265
Cdd:COG1196 371 EAE ----- LA E AEEELE E LAE E LLEALRAAAELAAQLEE LE EAEEALLERLE RL EEEL E E L E E A L AELE E EEE ------- 438
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 266 elphaagagdasdhsgsp E QQLDEKD A RRFQLKIA E LSAIIRK L EDRNALLSEERNEL L KRVR E AESQYKPL L DKNKRLS 345
Cdd:COG1196 439 ------------------ E EEEALEE A AEEEAELE E EEEALLE L LAELLEEAALLEAA L AELL E ELAEAAAR L LLLLEAE 500
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 346 RKN E DLSHALRRMENK lkfvtqeniem RQRA G IIRRPSS L NDLDQS qd EREVDFLK L QIVE Q QNLIDELSKTLETAG Y V K 425
Cdd:COG1196 501 ADY E GFLEGVKAALLL ----------- AGLR G LAGAVAV L IGVEAA -- YEAALEAA L AAAL Q NIVVEDDEVAAAAIE Y L K 567
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 426 S - VLE R DKL L RFR K Q R KKM A KLPKPVVVETFFGY D EE AS LESDGSSVS Y QTDR T DQ - TPCTPDDDLEEGMAKEETEL R F R 503
Cdd:COG1196 568 A a KAG R ATF L PLD K I R ARA A LAAALARGAIGAAV D LV AS DLREADARY Y VLGD T LL g RTLVAARLEAALRRAVTLAG R L R 647
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 504 QL T M E YQALQRAYA L LQEQVGGT L D A ER E VKTREQLQ AE VQRAQARIEDLEKALA E QGQDMKWIE E KQA L YRRNQ E LVEK 583
Cdd:COG1196 648 EV T L E GEGGSAGGS L TGGSRREL L A A LL E AEAELEEL AE RLAEEELELEEALLAE E EEERELAEA E EER L EEELE E EALE 727
570 580 590
....*....|....*....|....*....|....*.
gi 1973449194 584 IKQMETE E AR L RHEVQDARDQN E LLEFRIL E LEER E 619
Cdd:COG1196 728 EQLEAER E EL L EELLEEEELLE E EALEELP E PPDL E 763
SMC_prok_A
TIGR02169 chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ...
45-830
1.87e-06
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain]
Cd Length: 1164
Bit Score: 51.99
E-value: 1.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 45 KVSKVER EK N Q E L RQV R EHEQHKTAVL lt E L KTKLH E EKMK EL QAVR E T L L RQ H EA e LL R VIKIKDN E NQR L QALL S A L R 124
Cdd:TIGR02169 188 RLDLIID EK R Q Q L ERL R REREKAERYQ -- A L LKEKR E YEGY EL LKEK E A L E RQ K EA - IE R QLASLEE E LEK L TEEI S E L E 264
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 125 DGGP E KVK tv LL S E AKEEA K KGF E V E KVKMQQE I S EL KG ---- AK R QVE E ALTLVIQ A DK i KA A EIRSVYHLHQE EI TRI 200
Cdd:TIGR02169 265 KRLE E IEQ -- LL E E LNKKI K DLG E E E QLRVKEK I G EL EA eias LE R SIA E KERELED A EE - RL A KLEAEIDKLLA EI EEL 341
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 201 KK E C E R E IR R --- L M EE IKFKDRAVFV L ER EL GVQAGHAQRLQLQKEALD E Q L SQVRE adrhpgsprrelphaagag DAS 277
Cdd:TIGR02169 342 ER E I E E E RK R rdk L T EE YAELKEELED L RA EL EEVDKEFAETRDELKDYR E K L EKLKR ------------------- EIN 402
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 278 DHSGSPEQQLD E K da R R FQLKI A E L S A I I RKL E DRNAL L S EE RNELLKRVREA E SQYKP L LDKNKRLSRKNE DL SHALR R 357
Cdd:TIGR02169 403 ELKRELDRLQE E L -- Q R LSEEL A D L N A A I AGI E AKINE L E EE KEDKALEIKKQ E WKLEQ L AADLSKYEQELY DL KEEYD R 480
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 358 M E NK L KFVTQ E NI E MRQR A GIIRRPSSLNDLDQSQDEREVDFLKLQIVEQQNLIDELSKTL E T A G ------- Y V KSVLER 430
Cdd:TIGR02169 481 V E KE L SKLQR E LA E AEAQ A RASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAI E V A A gnrlnnv V V EDDAVA 560
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 431 DKLLRFR K Q RK ---------- KM AKLPKPVVVETFF G YDEE A S -- L E S D --- GSSVS Y QTDR T DQT pctpd D D L E EG mak 495
Cdd:TIGR02169 561 KEAIELL K R RK agratflpln KM RDERRDLSILSED G VIGF A V dl V E F D pky EPAFK Y VFGD T LVV ----- E D I E AA --- 632
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 496 EETELRF R QL T M E YQALQRAY A L lqeq V GG TLDAEREVKTREQLQ AE V QR AQA R I E D L EKA L AEQGQDMKW IE ek QA L YR 575
Cdd:TIGR02169 633 RRLMGKY R MV T L E GELFEKSG A M ---- T GG SRAPRGGILFSRSEP AE L QR LRE R L E G L KRE L SSLQSELRR IE -- NR L DE 706
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 576 RN QEL VEKIKQMETE E ARLRHEV Q DARDQN E L LE FRILE L EER E RKSPAISFHHTPFVDGKSP L QVYCEA -- E GVT D IVV 653
Cdd:TIGR02169 707 LS QEL SDASRKIGEI E KEIEQLE Q EEEKLK E R LE ELEED L SSL E QEIENVKSELKELEARIEE L EEDLHK le E ALN D LEA 786
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 654 AELMKKLDILGDNAVS nlt N EE Q V VV I Q AR TVLTLAEKI RL HFA lsptlsafppkggkw LQQI E ETEAA LQ RKMV DL ESE 733
Cdd:TIGR02169 787 RLSHSRIPEIQAELSK --- L EE E V SR I E AR LREIEQKLN RL TLE --------------- KEYL E KEIQE LQ EQRI DL KEQ 848
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 734 KELFS K QK gyld E E L DYR K QA L DQANK E AG A KVAE L ls E EEREK LK VAVEQWKR Q v MS EL RER daqi LR E RMELLQLAQQ 813
Cdd:TIGR02169 849 IKSIE K EI ---- E N L NGK K EE L EEELE E LE A ALRD L -- E SRLGD LK KERDELEA Q - LR EL ERK ---- IE E LEAQIEKKRK 917
810
....*....|....*..
gi 1973449194 814 R IK EL EERI EA QKRQIK 830
Cdd:TIGR02169 918 R LS EL KAKL EA LEEELS 934
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
27-824
2.28e-06
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 51.60
E-value: 2.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 27 D L R A K L TDIQIE L Q -- QEKSKVSKV E REKNQELRQVR E H E QHKTAVLLT E L K tkl H EE KMK E LQAVR E TLLRQ h EA EL LR 104
Cdd:TIGR02168 217 E L K A E L RELELA L L vl RLEELREEL E ELQEELKEAEE E L E ELTAELQEL E E K --- L EE LRL E VSELE E EIEEL - QK EL YA 292
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 105 VIKIKDNEN Q RL Q A L LSA L RDGGPEKVKTVLLS E AK E EAKKGFEV E KVKMQQEIS ELK GAKRQV E EA L tlviqadkikaa 184
Cdd:TIGR02168 293 LANEISRLE Q QK Q I L RER L ANLERQLEELEAQL E EL E SKLDELAE E LAELEEKLE ELK EELESL E AE L ------------ 360
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 185 eirsvyhlhq EE ITRIKK E C E REIRR L M E EIKFKDRA V FV LE RELGVQAGHAQ RL QLQK E A L DEQLSQVREADR hpgspr 264
Cdd:TIGR02168 361 ---------- EE LEAELE E L E SRLEE L E E QLETLRSK V AQ LE LQIASLNNEIE RL EARL E R L EDRRERLQQEIE ------ 424
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 265 relphaagagdasdhsg SPEQQ L D E KDARRF Q LKIA EL SAIIRK L EDRNAL L S E ERN EL LKRVR EAE SQYKPLLDKNKR L 344
Cdd:TIGR02168 425 ----------------- ELLKK L E E AELKEL Q AELE EL EEELEE L QEELER L E E ALE EL REELE EAE QALDAAERELAQ L 487
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 345 SRKNED L SHALRRM E NKLKF V TQENIEMRQRA GI IRRP S S L NDL D q SQD E REVD flklq IVEQQN L IDELSKT L ET A GYV 424
Cdd:TIGR02168 488 QARLDS L ERLQENL E GFSEG V KALLKNQSGLS GI LGVL S E L ISV D - EGY E AAIE ----- AALGGR L QAVVVEN L NA A KKA 561
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 425 KSV L ERDK L L R frkqrkk MAK LP KPVVVE T FFGYDEEAS L ESDGSSVSYQT D RTDQT P ------------ CTPD DDL EEG 492
Cdd:TIGR02168 562 IAF L KQNE L G R ------- VTF LP LDSIKG T EIQGNDREI L KNIEGFLGVAK D LVKFD P klrkalsyllgg VLVV DDL DNA 634
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 493 MA - KEETELRF R QL T MEYQALQRAYALLQ --- EQVGGT L DAE RE vkt R E Q L QAEVQRAQAR I ED LEKALAE --- QGQDMK 565
Cdd:TIGR02168 635 LE l AKKLRPGY R IV T LDGDLVRPGGVITG gsa KTNSSI L ERR RE --- I E E L EEKIEELEEK I AE LEKALAE lrk ELEELE 711
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 566 wi EE KQA L YRRNQ EL VEK I KQMETEE ARL RH EV QDARDQNEL L EFRIL ELE ERERK -------- SPAISFHHTPFVDGKS 637
Cdd:TIGR02168 712 -- EE LEQ L RKELE EL SRQ I SALRKDL ARL EA EV EQLEERIAQ L SKELT ELE AEIEE leerleea EEELAEAEAEIEELEA 789
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 638 PLQVYC E AEGVTDIVVA EL MKK L DI L GD --- N AVSN L TNE E QVVVIQA R TVLT L A E K I R lhf A LS PTLSAFPPKGGKWLQ 714
Cdd:TIGR02168 790 QIEQLK E ELKALREALD EL RAE L TL L NE eaa N LRER L ESL E RRIAATE R RLED L E E Q I E --- E LS EDIESLAAEIEELEE 866
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 715 Q IEE T E AA L QRKMVDLE S EK E LFSKQKGY L D E ------ EL DYRKQA L DQANK E AGA K V A E L ls E EER E K L K V AVEQWKRQ 788
Cdd:TIGR02168 867 L IEE L E SE L EALLNERA S LE E ALALLRSE L E E lseelr EL ESKRSE L RRELE E LRE K L A Q L -- E LRL E G L E V RIDNLQER 944
810 820 830
....*....|....*....|....*....|....*....
gi 1973449194 789 VMS E LR --- E RDAQILRERMELLQL A QQ R I K E LE ER I EA 824
Cdd:TIGR02168 945 LSE E YS ltl E EAEALENKIEDDEEE A RR R L K R LE NK I KE 983
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
495-813
2.79e-06
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 51.09
E-value: 2.79e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 495 K E ET EL RFRQ L TMEYQA L QRAYAL L QEQVG - GTLDA E REVKTREQ L Q AE VQRAQARI E D LE KA L A E - Q GQDMKWIE E KQA 572
Cdd:COG1196 220 E E LK EL EAEL L LLKLRE L EAELEE L EAELE e LEAEL E ELEAELAE L E AE LEELRLEL E E LE LE L E E a Q AEEYELLA E LAR 299
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 573 L YRRNQE L V E KIKQM E TEEAR L RH E VQDARDQN E L LE FRIL ELEE RER kspaisfhhtpfvdgksplqvyc EAE GVTDIV 652
Cdd:COG1196 300 L EQDIAR L E E RRREL E ERLEE L EE E LAELEEEL E E LE EELE ELEE ELE ----------------------- EAE EELEEA 356
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 653 V AEL MKKLDI L GDNAVSNLTN EE QVVVIQARTVLT L AEKIR L HFA lsptlsafppkggkw L QQI EE T E A AL QRKMVD LE S 732
Cdd:COG1196 357 E AEL AEAEEA L LEAEAELAEA EE ELEELAEELLEA L RAAAE L AAQ --------------- L EEL EE A E E AL LERLER LE E 421
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 733 E K - EL FSKQKGYLD EE LDYRKQALDQ A NK EA GAKVA E LLSE E EREK L KVAVEQWKRQVMSE L R E RDAQIL R ERME L LQL A 811
Cdd:COG1196 422 E L e EL EEALAELEE EE EEEEEALEEA A EE EA ELEEE E EALL E LLAE L LEEAALLEAALAEL L E E LAEAAA R LLLL L EAE A 501
..
gi 1973449194 812 QQ 813
Cdd:COG1196 502 DY 503
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
26-595
2.97e-05
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 48.01
E-value: 2.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 26 E D L R A K L TDIQI EL QQEKSKV skve R E KNQ EL RQVREH E QHKT A V L LTELKTKLHE E KMKELQAV R ETL L RQHE AEL LRV 105
Cdd:COG1196 256 E E L E A E L AELEA EL EELRLEL ---- E E LEL EL EEAQAE E YELL A E L ARLEQDIARL E ERRRELEE R LEE L EEEL AEL EEE 331
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 106 I kik DNENQR L QA L LSA L RDGGP E KVKTVLLSEAK EEA KKGF E V E KVKMQQ E IS EL KG ---- A K R QVE E ALTLVIQADKI 181
Cdd:COG1196 332 L --- EELEEE L EE L EEE L EEAEE E LEEAEAELAEA EEA LLEA E A E LAEAEE E LE EL AE elle A L R AAA E LAAQLEELEEA 408
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 182 KA A EIRSVYH L HQ E EITRIKKEC E R E IRRLM EE IKFKDR A VFVL E R E LGVQ A GHAQRLQ L QK E - AL D E QLSQVREADRHP 260
Cdd:COG1196 409 EE A LLERLER L EE E LEELEEALA E L E EEEEE EE EALEEA A EEEA E L E EEEE A LLELLAE L LE E a AL L E AALAELLEELAE 488
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 261 GSP R RE L PHA A G A GDASDHS G SPEQQ L DEKDARRFQLKIAELSAIIRKLEDRN A L L SEERNELLKRVR E AESQYKPL L d K 340
Cdd:COG1196 489 AAA R LL L LLE A E A DYEGFLE G VKAAL L LAGLRGLAGAVAVLIGVEAAYEAALE A A L AAALQNIVVEDD E VAAAAIEY L - K 567
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 341 NKRLS R KNEDLSHAL R R menklkfv TQENIEMRQ R AG I IRRPSSLNDLDQSQ D E R EVDFLKLQIVEQQNLIDELSKTLET 420
Cdd:COG1196 568 AAKAG R ATFLPLDKI R A -------- RAALAAALA R GA I GAAVDLVASDLREA D A R YYVLGDTLLGRTLVAARLEAALRRA 639
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 421 AGYVKSVL E RDKLLRFRKQRKKMAKLPKPVVVETFFGYDE E ASLESDGSSVSYQTDRTDQTPCTPDDDLEEGMAK E ET E L 500
Cdd:COG1196 640 VTLAGRLR E VTLEGEGGSAGGSLTGGSRRELLAALLEAEA E LEELAERLAEEELELEEALLAEEEEERELAEAEE E RL E E 719
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 501 RFRQLTM E Y Q ALQRAYA LL Q E QVGGTLDA E R E VKTREQLQAEVQRAQARI E D LE KALAEQ G Q - DMKW IEE KQA L YR R NQE 579
Cdd:COG1196 720 ELEEEAL E E Q LEAEREE LL E E LLEEEELL E E E ALEELPEPPDLEELEREL E R LE REIEAL G P v NLLA IEE YEE L EE R YDF 799
570
....*....|....*.
gi 1973449194 580 L V E KIKQM E TEEAR L R 595
Cdd:COG1196 800 L S E QREDL E EARET L E 815
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
284-830
3.19e-04
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 44.54
E-value: 3.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 284 E QQLD E KDARRFQLKIA EL SAIIRK LE DRNALLSE E RN ELL KRVREA E SQYKP L LDKNKR L SRKN E D L SHA L RRM E NK L K 363
Cdd:COG1196 254 E LEEL E AELAELEAELE EL RLELEE LE LELEEAQA E EY ELL AELARL E QDIAR L EERRRE L EERL E E L EEE L AEL E EE L E 333
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 364 FVTQ E NI E MRQRAGIIRRP ----- SS L NDLDQSQD E R E VDFLKLQIVEQQNLIDE L SKTLET A GYVKSVL E RDKLLRFRK 438
Cdd:COG1196 334 ELEE E LE E LEEELEEAEEE leeae AE L AEAEEALL E A E AELAEAEEELEELAEEL L EALRAA A ELAAQLE E LEEAEEALL 413
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 439 Q R KKMAK lpkpvvvetffgy D E EAS LE SDGSSVSYQTDRTDQT pctpdd DL E EGMAKE E T E LRFRQ L TMEYQA L QRAY AL 518
Cdd:COG1196 414 E R LERLE ------------- E E LEE LE EALAELEEEEEEEEEA ------ LE E AAEEEA E L E EEEEA L LELLAE L LEEA AL 474
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 519 L QEQVGGT L DAER E VKT R EQ L QA E VQ ---------- R A QARIED L EKALAEQGQDMKWIEEKQ A LYRRNQELVEKIKQM E 588
Cdd:COG1196 475 L EAALAEL L EELA E AAA R LL L LL E AE adyegflegv K A ALLLAG L RGLAGAVAVLIGVEAAYE A ALEAALAAALQNIVV E 554
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 589 TE E ARLRHEVQDARDQNELLE F RI L ELEERERKSP A ISFHHT -- PF VD GKSPLQVYCE A E -- GVT D IVVAELMKKLDILG 664
Cdd:COG1196 555 DD E VAAAAIEYLKAAKAGRAT F LP L DKIRARAALA A ALARGA ig AA VD LVASDLREAD A R yy VLG D TLLGRTLVAARLEA 634
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 665 DNAVSNLTNEEQVV V IQARTVLTLAEKIRLHFALS ptlsafppkggkw L QQIEETEA A LQRKMVDLES E K EL FSKQKGYL 744
Cdd:COG1196 635 ALRRAVTLAGRLRE V TLEGEGGSAGGSLTGGSRRE ------------- L LAALLEAE A ELEELAERLA E E EL ELEEALLA 701
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 745 D EE LDYRKQALDQANK E AGAKVAE L LSEE E R E KLKVAV E QW krqvmselre RDAQI L R E RMELLQLAQQRIK ELE ERI E A 824
Cdd:COG1196 702 E EE EERELAEAEEERL E EELEEEA L EEQL E A E REELLE E LL ---------- EEEEL L E E EALEELPEPPDLE ELE REL E R 771
....*.
gi 1973449194 825 QK R Q I K 830
Cdd:COG1196 772 LE R E I E 777
PTZ00121
PTZ00121 MAEBL; Provisional
50-621
6.88e-04
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 43.59
E-value: 6.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 50 E RE K NQEL R QVREHEQHKTAVLLT E LKTKLHEE K MKELQAVR E T ll RQHEA E LLRVIKIKD NE NQ R lqalls ALRDGGPE 129
Cdd:PTZ00121 1192 E LR K AEDA R KAEAARKAEEERKAE E ARKAEDAK K AEAVKKAE E A -- KKDAE E AKKAEEERN NE EI R ------ KFEEARMA 1263
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 130 KVKTVLLSEAK EEA K K GF E VE K VKMQQEIS E L K G A -- K RQVE EA ltlviqad K I KA A E IRSV yhlhq E E ITRIKK E CERE 207
Cdd:PTZ00121 1264 HFARRQAAIKA EEA R K AD E LK K AEEKKKAD E A K K A ee K KKAD EA -------- K K KA E E AKKA ----- D E AKKKAE E AKKK 1330
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 208 IRRLMEEIKFKDR A VFVLER E LGVQ A GH A QRLQLQK EA LDEQLSQVREADRHPGSPRR E LPH A AG A GDASDHSGSPEQQ L 287
Cdd:PTZ00121 1331 ADAAKKKAEEAKK A AEAAKA E AEAA A DE A EAAEEKA EA AEKKKEEAKKKADAAKKKAE E KKK A DE A KKKAEEDKKKADE L 1410
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 288 DEKD A RRFQLKI A ELS A IIR K LE D RNALLS EE RNELLKRVRE AE SQY K PLLD K N K RLSR K NE D LSHALRRMEN K LKFVTQ 367
Cdd:PTZ00121 1411 KKAA A AKKKADE A KKK A EEK K KA D EAKKKA EE AKKADEAKKK AE EAK K AEEA K K K AEEA K KA D EAKKKAEEAK K ADEAKK 1490
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 368 ENI E MRQR A GIIRRPSS ---- LNDLDQSQDEREV D fl KLQIV E QQNLI DE LS K TL E tagy V K SVL E RD K LLRFR K QRK K M 443
Cdd:PTZ00121 1491 KAE E AKKK A DEAKKAAE akkk ADEAKKAEEAKKA D -- EAKKA E EAKKA DE AK K AE E ---- K K KAD E LK K AEELK K AEE K K 1564
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 444 A klpkpvv V E TFFGYD E EASLESDGSSVSYQTDRTDQTPCTPDDDL E EG M AK EE TE l RFRQLTMEYQA L QR A YALLQEQV 523
Cdd:PTZ00121 1565 K ------- A E EAKKAE E DKNMALRKAEEAKKAEEARIEEVMKLYEE E KK M KA EE AK - KAEEAKIKAEE L KK A EEEKKKVE 1636
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 524 GGTLDAER E V K TR E Q L QAEVQRAQARIEDLE K ALA E --- QGQDM K WI EE K ----- Q AL YRRNQ E L -- V E KI K QM E T EE AR 593
Cdd:PTZ00121 1637 QLKKKEAE E K K KA E E L KKAEEENKIKAAEEA K KAE E dkk KAEEA K KA EE D ekkaa E AL KKEAE E A kk A E EL K KK E A EE KK 1716
570 580
....*....|....*....|....*...
gi 1973449194 594 LRH E VQD A RDQ N ELLEFRILELE E RER K 621
Cdd:PTZ00121 1717 KAE E LKK A EEE N KIKAEEAKKEA E EDK K 1744
EnvC
COG4942 Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...
26-256
7.63e-04
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain]
Cd Length: 377
Bit Score: 42.83
E-value: 7.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 26 EDLR A K L TDI Q I E LQQEKSKVSKVER E KNQE L R Q VREH E Q hkt AVLLTELKTKLH E EKMKE L Q A V retl L RQH E A E LLRV 105
Cdd:COG4942 23 AEAE A E L EQL Q Q E IAELEKELAALKK E EKAL L K Q LAAL E R --- RIAALARRIRAL E QELAA L E A E ---- L AEL E K E IAEL 95
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 106 IKIKDNENQR L QA LL S AL - R D G GPEKVKTV L LS E AKEE A kkgfevek V KMQ Q EISE L KG A K R QVE E A L TLVIQADKIKA A 184
Cdd:COG4942 96 RAELEAQKEE L AE LL R AL y R L G RQPPLALL L SP E DFLD A -------- V RRL Q YLKY L AP A R R EQA E E L RADLAELAALR A 167
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1973449194 185 E IRS vyhl HQE E ITRIKK E C E R E IRR L MEEIKFKDRAVFV LE R EL GVQ A GHAQR LQ LQK E A L DEQLSQVREA 256
Cdd:COG4942 168 E LEA ---- ERA E LEALLA E L E E E RAA L EALKAERQKLLAR LE K EL AEL A AELAE LQ QEA E E L EALIARLEAE 235
COG4913
COG4913 Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
496-620
1.85e-03
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain]
Cd Length: 1089
Bit Score: 42.21
E-value: 1.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 496 E E T E LRFRQLTMEYQ AL QRAYAL LQE Q vggt LD A EREVKTREQLQAE V QR A QAR I ED LE KA L AEQGQDMKWI ---- E EKQ 571
Cdd:COG4913 620 A E L E EELAEAEERLE AL EAELDA LQE R ---- RE A LQRLAEYSWDEID V AS A ERE I AE LE AE L ERLDASSDDL aale E QLE 695
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 1973449194 572 A L YRRNQ EL V E KIKQMET E EA RL RH E VQD A RDQNEL L EF R ILEL E ERE R 620
Cdd:COG4913 696 E L EAELE EL E E ELDELKG E IG RL EK E LEQ A EEELDE L QD R LEAA E DLA R 744
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
307-621
1.95e-03
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 41.97
E-value: 1.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 307 R KL E DRNA L LSEER N el L K R V ---- R E A E S Q Y K P L --- LD K NK R LSRKNED L SHA -------- L RRMENK L KFVTQ E NI E 371
Cdd:TIGR02168 173 R RK E TERK L ERTRE N -- L D R L edil N E L E R Q L K S L erq AE K AE R YKELKAE L REL elallvlr L EELREE L EELQE E LK E 250
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 372 MRQRAGIIRR psslndl DQSQD E REVDF L K L QIV E QQNL I D EL S K T L ETAGYVK S V LE RD K - L LR F R KQRKKMAKLPKPV 450
Cdd:TIGR02168 251 AEEELEELTA ------- ELQEL E EKLEE L R L EVS E LEEE I E EL Q K E L YALANEI S R LE QQ K q I LR E R LANLERQLEELEA 323
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 451 VV E TFFGYDE E ASL E SDGSSVSYQTDRTDQTPC t PDDDL E EGMAK EE T E L R FRQ L TMEYQA L QRAY A L L QE Q V ggtldae 530
Cdd:TIGR02168 324 QL E ELESKLD E LAE E LAELEEKLEELKEELESL - EAELE E LEAEL EE L E S R LEE L EEQLET L RSKV A Q L EL Q I ------- 395
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 531 revktr EQ L QA E VQ R AQ AR I E D LE KALAEQG Q DMKWIEE K QALYRR n Q EL VEKIKQM E T E EAR L RH E VQDARDQN E L L EF 610
Cdd:TIGR02168 396 ------ AS L NN E IE R LE AR L E R LE DRRERLQ Q EIEELLK K LEEAEL - K EL QAELEEL E E E LEE L QE E LERLEEAL E E L RE 468
330
....*....|.
gi 1973449194 611 RIL E L E ERERK 621
Cdd:TIGR02168 469 ELE E A E QALDA 479
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
158-824
2.37e-03
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 41.85
E-value: 2.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 158 ISE L KGAKRQV E EALT L VIQADKIK A AEIRSVYHLHQE E ITRIKK --- E C E R E IRR L ME E IKFKDRAVFV L ER EL GVQAG 234
Cdd:COG1196 202 LEP L ERQAEKA E RYRE L KEELKELE A ELLLLKLRELEA E LEELEA ele E L E A E LEE L EA E LAELEAELEE L RL EL EELEL 281
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 235 HAQRL Q LQKEA L DEQ L SQVREADRH pgsp RR E lphaagagdasdhsgsp EQQLD E KDARRFQLKI AEL SAIIRK LE DRNA 314
Cdd:COG1196 282 ELEEA Q AEEYE L LAE L ARLEQDIAR ---- LE E ----------------- RRREL E ERLEELEEEL AEL EEELEE LE EELE 340
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 315 L L S EE RN E LLKRVR EAE SQ ykp L LDKNKR L SRKNED L SH A LRRM E NKLK fvt QENIEM R QR A GIIRRPSS L NDLDQSQD E 394
Cdd:COG1196 341 E L E EE LE E AEEELE EAE AE --- L AEAEEA L LEAEAE L AE A EEEL E ELAE --- ELLEAL R AA A ELAAQLEE L EEAEEALL E 414
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 395 R EVDFLKLQIVEQQN L IDELSKTL E TA gyvksvlerdkl LRFRKQRKKM A K L pkpvvvetffgydeeaslesdgssvsyq 474
Cdd:COG1196 415 R LERLEEELEELEEA L AELEEEEE E EE ------------ EALEEAAEEE A E L ---------------------------- 454
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 475 tdrtdqtpctpddd L EE GM A KE E TELRFRQLTMEYQ A LQRAYALLQEQVGGT L DAER E VKTREQLQA E VQR A QARIED L E 554
Cdd:COG1196 455 -------------- E EE EE A LL E LLAELLEEAALLE A ALAELLEELAEAAAR L LLLL E AEADYEGFL E GVK A ALLLAG L R 520
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 555 KALAEQGQDMKWIEEKQ A LYRRNQELVEKIKQM E TE E ARLRHEVQDARDQNELLE F RI L ELEERERKSP A ISFHHT -- PF 632
Cdd:COG1196 521 GLAGAVAVLIGVEAAYE A ALEAALAAALQNIVV E DD E VAAAAIEYLKAAKAGRAT F LP L DKIRARAALA A ALARGA ig AA 600
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 633 VD GKSPLQVYCE A E -- GVT D IVVAELMKKLDILGDNAVSNLTNEEQVV V IQARTVLTLAEKIRLHFALS ptlsafppkgg 710
Cdd:COG1196 601 VD LVASDLREAD A R yy VLG D TLLGRTLVAARLEAALRRAVTLAGRLRE V TLEGEGGSAGGSLTGGSRRE ----------- 669
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 711 kw L QQIEETEA A LQRKMVDLES E K EL FSKQKGYLD EE LDYRKQALDQANK E AGAKVAE L LSEE E R E KLKVAV E QWKRQ vm 790
Cdd:COG1196 670 -- L LAALLEAE A ELEELAERLA E E EL ELEEALLAE EE EERELAEAEEERL E EELEEEA L EEQL E A E REELLE E LLEEE -- 745
650 660 670
....*....|....*....|....*....|....
gi 1973449194 791 s EL R E RD A QILRERMEL L QLAQQRIKE LE ER IEA 824
Cdd:COG1196 746 - EL L E EE A LEELPEPPD L EELERELER LE RE IEA 778
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
713-830
3.01e-03
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 41.46
E-value: 3.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 713 L QQI E ETEAA L QRKMVD LE S E K E LFSKQKGY L DE EL DYRKQA L DQANK E --- A G A KVA ELL S E EE R EKLKV A VEQWK R QV 789
Cdd:COG1196 234 L REL E AELEE L EAELEE LE A E L E ELEAELAE L EA EL EELRLE L EELEL E lee A Q A EEY ELL A E LA R LEQDI A RLEER R RE 313
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 1973449194 790 MS E LR E RDAQI L R E RM E L L QLAQQRIK ELEE RI E AQKRQIK 830
Cdd:COG1196 314 LE E RL E ELEEE L A E LE E E L EELEEELE ELEE EL E EAEEELE 354
COG2433
COG2433 Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
528-617
3.43e-03
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain]
Cd Length: 644
Bit Score: 41.00
E-value: 3.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1973449194 528 DA E REVKTR E -- Q L QAE V Q R AQ A RI E D LE KA L A E QGQDMKWI E EKQALY R RNQELV ---- EK I KQMET E EA RL RH E VQDA 601
Cdd:COG2433 405 ER E LTEEEE E ir R L EEQ V E R LE A EV E E LE AE L E E KDERIERL E RELSEA R SEERRE irkd RE I SRLDR E IE RL ER E LEEE 484
90
....*....|....*.
gi 1973449194 602 R DQN E L L EFRILE L E E 617
Cdd:COG2433 485 R ERI E E L KRKLER L K E 500
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
