NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1313982638|ref|NP_001345897|]
View 

phosphorylase b kinase regulatory subunit alpha, liver isoform isoform d [Mus musculus]

Protein Classification

glycoside hydrolase family 15 protein( domain architecture ID 10465003)

glycoside hydrolase family 15 protein similar to glucoamylase (glucan 1,4-alpha-glucosidase) that catalyzes the hydrolysis of terminal (1->4)-linked alpha-D-glucose residues successively from non-reducing ends of starch with release of glucose

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
Glyco_hydro_15 pfam00723
Glycosyl hydrolases family 15; In higher organizms this family is represented by phosphorylase ...
8-439 2.20e-105

Glycosyl hydrolases family 15; In higher organizms this family is represented by phosphorylase kinase subunits.


:

Pssm-ID: 395586  Cd Length: 417  Bit Score: 322.09  E-value: 2.20e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1313982638   8 GVRLDGYARLVQQTILCYQNPVTGLLSASHDQKD-----AWVRDNIYSILAVWGLGMayrknadRDEDKAKAYELEQNVV 82
Cdd:pfam00723   1 GIALDAYLRNIGTLKLLIYGPVTGLVIASPSTSLpdyyyTWVRDSALTILALLGLGY-------RDEDDAFRYGLETSLA 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1313982638  83 KLMRGLLQCMMRQVDKVEKFKHTQSTkdSLHAKYNTATCSTVVGDDQWGHLQVDATSLFLLFLAQMTASGLRIIFTLDEV 162
Cdd:pfam00723  74 KLMRGYLQAMYRQQGKSEPFGERESG--GLGEPGFNGDGPVRVGNDAWGRLQLDGPALRALALIQYTANGLVIIDTLDEV 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1313982638 163 afIQNLVFYIEAAYKVADYGMWErgdkTNQGIPELnaSSVGVAKAALEAIDELDLFGAHGgrksvihvlpdevehcqsil 242
Cdd:pfam00723 152 --VKNLLDYVEAAWNEPDFGLWE----ENGGRSFF--SSAMMWKALLEAIDFAELFGDHG-------------------- 203
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1313982638 243 fsmlprastskeidagllsiisfpafaveDVNLVNVTKNEIISKLQGRygccrflrdGYktpredphrlhydpaelklfe 322
Cdd:pfam00723 204 -----------------------------SAQLWESTADEILNKLQKR---------GF--------------------- 224
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1313982638 323 nieceWPVFWTYLIIDGIFngdavqvqEYREALEGILIrgkdgihLVPELYAIPPDKvdeeyknphtvdrvplgklPHLW 402
Cdd:pfam00723 225 -----WPLFNTYIQLYGSF--------EYRSGLDASLL-------LLPILGFDPPDD-------------------PRIL 265
                         410       420       430
                  ....*....|....*....|....*....|....*..
gi 1313982638 403 GQSLYILSSLLAEGFLATGEIDPLNRRFSTSVKPDVV 439
Cdd:pfam00723 266 ATLKYILDSLLSDGFLNSGESDPLVRRYPEDVYPDVV 302
 
Name Accession Description Interval E-value
Glyco_hydro_15 pfam00723
Glycosyl hydrolases family 15; In higher organizms this family is represented by phosphorylase ...
8-439 2.20e-105

Glycosyl hydrolases family 15; In higher organizms this family is represented by phosphorylase kinase subunits.


Pssm-ID: 395586  Cd Length: 417  Bit Score: 322.09  E-value: 2.20e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1313982638   8 GVRLDGYARLVQQTILCYQNPVTGLLSASHDQKD-----AWVRDNIYSILAVWGLGMayrknadRDEDKAKAYELEQNVV 82
Cdd:pfam00723   1 GIALDAYLRNIGTLKLLIYGPVTGLVIASPSTSLpdyyyTWVRDSALTILALLGLGY-------RDEDDAFRYGLETSLA 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1313982638  83 KLMRGLLQCMMRQVDKVEKFKHTQSTkdSLHAKYNTATCSTVVGDDQWGHLQVDATSLFLLFLAQMTASGLRIIFTLDEV 162
Cdd:pfam00723  74 KLMRGYLQAMYRQQGKSEPFGERESG--GLGEPGFNGDGPVRVGNDAWGRLQLDGPALRALALIQYTANGLVIIDTLDEV 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1313982638 163 afIQNLVFYIEAAYKVADYGMWErgdkTNQGIPELnaSSVGVAKAALEAIDELDLFGAHGgrksvihvlpdevehcqsil 242
Cdd:pfam00723 152 --VKNLLDYVEAAWNEPDFGLWE----ENGGRSFF--SSAMMWKALLEAIDFAELFGDHG-------------------- 203
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1313982638 243 fsmlprastskeidagllsiisfpafaveDVNLVNVTKNEIISKLQGRygccrflrdGYktpredphrlhydpaelklfe 322
Cdd:pfam00723 204 -----------------------------SAQLWESTADEILNKLQKR---------GF--------------------- 224
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1313982638 323 nieceWPVFWTYLIIDGIFngdavqvqEYREALEGILIrgkdgihLVPELYAIPPDKvdeeyknphtvdrvplgklPHLW 402
Cdd:pfam00723 225 -----WPLFNTYIQLYGSF--------EYRSGLDASLL-------LLPILGFDPPDD-------------------PRIL 265
                         410       420       430
                  ....*....|....*....|....*....|....*..
gi 1313982638 403 GQSLYILSSLLAEGFLATGEIDPLNRRFSTSVKPDVV 439
Cdd:pfam00723 266 ATLKYILDSLLSDGFLNSGESDPLVRRYPEDVYPDVV 302
 
Name Accession Description Interval E-value
Glyco_hydro_15 pfam00723
Glycosyl hydrolases family 15; In higher organizms this family is represented by phosphorylase ...
8-439 2.20e-105

Glycosyl hydrolases family 15; In higher organizms this family is represented by phosphorylase kinase subunits.


Pssm-ID: 395586  Cd Length: 417  Bit Score: 322.09  E-value: 2.20e-105
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1313982638   8 GVRLDGYARLVQQTILCYQNPVTGLLSASHDQKD-----AWVRDNIYSILAVWGLGMayrknadRDEDKAKAYELEQNVV 82
Cdd:pfam00723   1 GIALDAYLRNIGTLKLLIYGPVTGLVIASPSTSLpdyyyTWVRDSALTILALLGLGY-------RDEDDAFRYGLETSLA 73
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1313982638  83 KLMRGLLQCMMRQVDKVEKFKHTQSTkdSLHAKYNTATCSTVVGDDQWGHLQVDATSLFLLFLAQMTASGLRIIFTLDEV 162
Cdd:pfam00723  74 KLMRGYLQAMYRQQGKSEPFGERESG--GLGEPGFNGDGPVRVGNDAWGRLQLDGPALRALALIQYTANGLVIIDTLDEV 151
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1313982638 163 afIQNLVFYIEAAYKVADYGMWErgdkTNQGIPELnaSSVGVAKAALEAIDELDLFGAHGgrksvihvlpdevehcqsil 242
Cdd:pfam00723 152 --VKNLLDYVEAAWNEPDFGLWE----ENGGRSFF--SSAMMWKALLEAIDFAELFGDHG-------------------- 203
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1313982638 243 fsmlprastskeidagllsiisfpafaveDVNLVNVTKNEIISKLQGRygccrflrdGYktpredphrlhydpaelklfe 322
Cdd:pfam00723 204 -----------------------------SAQLWESTADEILNKLQKR---------GF--------------------- 224
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1313982638 323 nieceWPVFWTYLIIDGIFngdavqvqEYREALEGILIrgkdgihLVPELYAIPPDKvdeeyknphtvdrvplgklPHLW 402
Cdd:pfam00723 225 -----WPLFNTYIQLYGSF--------EYRSGLDASLL-------LLPILGFDPPDD-------------------PRIL 265
                         410       420       430
                  ....*....|....*....|....*....|....*..
gi 1313982638 403 GQSLYILSSLLAEGFLATGEIDPLNRRFSTSVKPDVV 439
Cdd:pfam00723 266 ATLKYILDSLLSDGFLNSGESDPLVRRYPEDVYPDVV 302
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH