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Conserved domains on  [gi|755571572|ref|NP_001291700|]
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G-protein coupled receptor family C group 5 member B isoform 2 [Homo sapiens]

Protein Classification

7tmC_RAIG2_GPRC5B domain-containing protein( domain architecture ID 11607144)

7tmC_RAIG2_GPRC5B domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tmC_RAIG2_GPRC5B cd15278
retinoic acid-inducible orphan G-protein-coupled receptor 2; class C family of ...
185-428 8.14e-131

retinoic acid-inducible orphan G-protein-coupled receptor 2; class C family of seven-transmembrane G protein-coupled receptors, group 5, member B; Retinoic acid-inducible G-protein-coupled receptors (RAIGs), also referred to as GPCR class C group 5, are a group consisting of four orphan receptors RAIG1 (GPRC5A), RAIG2 (GPRC5B), RAIG3 (GPRC5C), and RAIG4 (GPRC5D). Unlike other members of the class C GPCRs which contain a large N-terminal extracellular domain, RAIGs have a shorter N-terminus. Thus, it is unlikely that RAIGs bind an agonist at its N-terminus domain. Instead, the agonists may bind to the seven-transmembrane domain of these receptors. In addition, RAIG2 and RAIG3 contain a cleavable signal peptide whereas RAIG1 and RAIG4 do not. Although their expression is induced by retinoic acid (vitamin A analog), their biological function is not clearly understood. To date, no ligand is known for the members of RAIG family. Three receptor types (RAIG1-3) are found in vertebrates, while RAIG4 is only present in mammals. They show distinct tissue distribution with RAIG1 being primarily expressed in the lung, RAIG2 in the brain and placenta, RAIG3 in the brain, kidney and liver, and RAIG4 in the skin. RAIG2 (GPRC5B), a mammalian Boss (Bride of sevenless) homolog, has been shown to activate obesity-associated inflammatory signaling in adipocytes, and that the GPRC5B knockout mice have been shown to be resistance to high-fat diet-induced obesity and insulin resistance.


:

Pssm-ID: 320405  Cd Length: 244  Bit Score: 380.70  E-value: 8.14e-131
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 185 IWGIVVEAVAGAGALITLLLMLILLVRLPFIKEKEKKSPVGLHFLFLLGTLGLFGLTFAFIIQEDETICSVRRFLWGVLF 264
Cdd:cd15278    1 IWGIVVEAVAGAGVLITLLLMLILLVRLPFIKEKEKKSPVGPHFLFLLGTLGLFGLTFAFIIQEDETICSLRRFLWGVLF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 265 ALCFSCLLSQAWRVRRLVRHGTGPAGWQLVGLALCLMLVQVIIAVEWLVLTVLRDTRPACAYEPMDFVMALIYDMVLLVV 344
Cdd:cd15278   81 ALCFSCLLAQGWRLRRLVRHGKGPSGWHLTGLALCLMLVQVIIAVEWLILTVLRDGRPACQYEPMDFVMALIYVMVLLVA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 345 TLGLALFTLCGKFKRWKLNGAFLLITAFLSVLIWVAWMTMYLFGNVKLQQGDAWNDPTLAITLAASGWVFVIFHAIPEIH 424
Cdd:cd15278  161 TLGLALFTLCGKFQKWKKNGICLLITCFLSVLIWVAWMTMYLYGNDELGRSDDWNDPTLAIALVASGWVFLIFHAIPEVH 240

                 ....
gi 755571572 425 CTLL 428
Cdd:cd15278  241 CTLL 244
 
Name Accession Description Interval E-value
7tmC_RAIG2_GPRC5B cd15278
retinoic acid-inducible orphan G-protein-coupled receptor 2; class C family of ...
185-428 8.14e-131

retinoic acid-inducible orphan G-protein-coupled receptor 2; class C family of seven-transmembrane G protein-coupled receptors, group 5, member B; Retinoic acid-inducible G-protein-coupled receptors (RAIGs), also referred to as GPCR class C group 5, are a group consisting of four orphan receptors RAIG1 (GPRC5A), RAIG2 (GPRC5B), RAIG3 (GPRC5C), and RAIG4 (GPRC5D). Unlike other members of the class C GPCRs which contain a large N-terminal extracellular domain, RAIGs have a shorter N-terminus. Thus, it is unlikely that RAIGs bind an agonist at its N-terminus domain. Instead, the agonists may bind to the seven-transmembrane domain of these receptors. In addition, RAIG2 and RAIG3 contain a cleavable signal peptide whereas RAIG1 and RAIG4 do not. Although their expression is induced by retinoic acid (vitamin A analog), their biological function is not clearly understood. To date, no ligand is known for the members of RAIG family. Three receptor types (RAIG1-3) are found in vertebrates, while RAIG4 is only present in mammals. They show distinct tissue distribution with RAIG1 being primarily expressed in the lung, RAIG2 in the brain and placenta, RAIG3 in the brain, kidney and liver, and RAIG4 in the skin. RAIG2 (GPRC5B), a mammalian Boss (Bride of sevenless) homolog, has been shown to activate obesity-associated inflammatory signaling in adipocytes, and that the GPRC5B knockout mice have been shown to be resistance to high-fat diet-induced obesity and insulin resistance.


Pssm-ID: 320405  Cd Length: 244  Bit Score: 380.70  E-value: 8.14e-131
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 185 IWGIVVEAVAGAGALITLLLMLILLVRLPFIKEKEKKSPVGLHFLFLLGTLGLFGLTFAFIIQEDETICSVRRFLWGVLF 264
Cdd:cd15278    1 IWGIVVEAVAGAGVLITLLLMLILLVRLPFIKEKEKKSPVGPHFLFLLGTLGLFGLTFAFIIQEDETICSLRRFLWGVLF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 265 ALCFSCLLSQAWRVRRLVRHGTGPAGWQLVGLALCLMLVQVIIAVEWLVLTVLRDTRPACAYEPMDFVMALIYDMVLLVV 344
Cdd:cd15278   81 ALCFSCLLAQGWRLRRLVRHGKGPSGWHLTGLALCLMLVQVIIAVEWLILTVLRDGRPACQYEPMDFVMALIYVMVLLVA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 345 TLGLALFTLCGKFKRWKLNGAFLLITAFLSVLIWVAWMTMYLFGNVKLQQGDAWNDPTLAITLAASGWVFVIFHAIPEIH 424
Cdd:cd15278  161 TLGLALFTLCGKFQKWKKNGICLLITCFLSVLIWVAWMTMYLYGNDELGRSDDWNDPTLAIALVASGWVFLIFHAIPEVH 240

                 ....
gi 755571572 425 CTLL 428
Cdd:cd15278  241 CTLL 244
7tm_3 pfam00003
7 transmembrane sweet-taste receptor of 3 GCPR; This is a domain of seven transmembrane ...
244-422 8.60e-23

7 transmembrane sweet-taste receptor of 3 GCPR; This is a domain of seven transmembrane regions that forms the C-terminus of some subclass 3 G-coupled-protein receptors. It is often associated with a downstream cysteine-rich linker domain, NCD3G pfam07562, which is the human sweet-taste receptor, and the N-terminal domain, ANF_receptor pfam01094. The seven TM regions assemble in such a way as to produce a docking pocket into which such molecules as cyclamate and lactisole have been found to bind and consequently confer the taste of sweetness.


Pssm-ID: 459626 [Multi-domain]  Cd Length: 247  Bit Score: 97.35  E-value: 8.60e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572  244 FIIQEDETICSVRRFLWGVLFALCFSCLLSQAWRV-RRLVRHGTGPAGWQLVGLALCLMLVQVIIAVEWLVLTVLRDTRP 322
Cdd:pfam00003  62 LFIGKPTVTCALRRFLFGVGFTLCFSCLLAKTFRLvLIFRRRKPGPRGWQLLLLALGLLLVQVIILTEWLIDPPFPEKDN 141
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572  323 A--------CAYEPMD--FVMALIYDMVLLVVTLGLAlftlcgkFKRWKLNGAF-----LLITAFLSVLIWVAWMTMYLF 387
Cdd:pfam00003 142 LsegkiileCEGSTSIafLDFVLAYVGLLLLAGFLLA-------FKTRKLPDNFneakfITFSMLLSVLIWVAFIPMYLY 214
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 755571572  388 GNvklqQGDAWNDPTLAITLA--ASGWVFVIFHAIPE 422
Cdd:pfam00003 215 GN----KGKGTWDPVALAIFAilASGWVLLGLYFIPK 247
 
Name Accession Description Interval E-value
7tmC_RAIG2_GPRC5B cd15278
retinoic acid-inducible orphan G-protein-coupled receptor 2; class C family of ...
185-428 8.14e-131

retinoic acid-inducible orphan G-protein-coupled receptor 2; class C family of seven-transmembrane G protein-coupled receptors, group 5, member B; Retinoic acid-inducible G-protein-coupled receptors (RAIGs), also referred to as GPCR class C group 5, are a group consisting of four orphan receptors RAIG1 (GPRC5A), RAIG2 (GPRC5B), RAIG3 (GPRC5C), and RAIG4 (GPRC5D). Unlike other members of the class C GPCRs which contain a large N-terminal extracellular domain, RAIGs have a shorter N-terminus. Thus, it is unlikely that RAIGs bind an agonist at its N-terminus domain. Instead, the agonists may bind to the seven-transmembrane domain of these receptors. In addition, RAIG2 and RAIG3 contain a cleavable signal peptide whereas RAIG1 and RAIG4 do not. Although their expression is induced by retinoic acid (vitamin A analog), their biological function is not clearly understood. To date, no ligand is known for the members of RAIG family. Three receptor types (RAIG1-3) are found in vertebrates, while RAIG4 is only present in mammals. They show distinct tissue distribution with RAIG1 being primarily expressed in the lung, RAIG2 in the brain and placenta, RAIG3 in the brain, kidney and liver, and RAIG4 in the skin. RAIG2 (GPRC5B), a mammalian Boss (Bride of sevenless) homolog, has been shown to activate obesity-associated inflammatory signaling in adipocytes, and that the GPRC5B knockout mice have been shown to be resistance to high-fat diet-induced obesity and insulin resistance.


Pssm-ID: 320405  Cd Length: 244  Bit Score: 380.70  E-value: 8.14e-131
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 185 IWGIVVEAVAGAGALITLLLMLILLVRLPFIKEKEKKSPVGLHFLFLLGTLGLFGLTFAFIIQEDETICSVRRFLWGVLF 264
Cdd:cd15278    1 IWGIVVEAVAGAGVLITLLLMLILLVRLPFIKEKEKKSPVGPHFLFLLGTLGLFGLTFAFIIQEDETICSLRRFLWGVLF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 265 ALCFSCLLSQAWRVRRLVRHGTGPAGWQLVGLALCLMLVQVIIAVEWLVLTVLRDTRPACAYEPMDFVMALIYDMVLLVV 344
Cdd:cd15278   81 ALCFSCLLAQGWRLRRLVRHGKGPSGWHLTGLALCLMLVQVIIAVEWLILTVLRDGRPACQYEPMDFVMALIYVMVLLVA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 345 TLGLALFTLCGKFKRWKLNGAFLLITAFLSVLIWVAWMTMYLFGNVKLQQGDAWNDPTLAITLAASGWVFVIFHAIPEIH 424
Cdd:cd15278  161 TLGLALFTLCGKFQKWKKNGICLLITCFLSVLIWVAWMTMYLYGNDELGRSDDWNDPTLAIALVASGWVFLIFHAIPEVH 240

                 ....
gi 755571572 425 CTLL 428
Cdd:cd15278  241 CTLL 244
7tmC_RAIG_GPRC5 cd15043
retinoic acid-inducible orphan G-protein-coupled receptors; class C family of ...
185-428 3.43e-112

retinoic acid-inducible orphan G-protein-coupled receptors; class C family of seven-transmembrane G protein-coupled receptors, group 5; Retinoic acid-inducible G-protein-coupled receptors (RAIGs), also referred to as GPCR class C group 5, are a group consisting of four orphan receptors RAIG1 (GPRC5A), RAIG2 (GPRC5B), RAIG3 (GPRC5C), and RAIG4 (GPRC5D). Unlike other members of the class C GPCRs which contain a large N-terminal extracellular domain, RAIGs have a shorter N-terminus. Thus, it is unlikely that RAIGs bind an agonist at its N-terminus domain. Instead, agonists may bind to the seven-transmembrane domain of these receptors. In addition, RAIG2 and RAIG3 contain a cleavable signal peptide whereas RAIG1 and RAIG4 do not. Although their expression is induced by retinoic acid (vitamin A analog), their biological function is not clearly understood. To date, no ligand is known for the members of RAIG family. Three receptor types (RAIG1-3) are found in vertebrates, while RAIG4 is only present in mammals. They show distinct tissue distribution with RAIG1 being primarily expressed in the lung, RAIG2 in the brain and placenta, RAIG3 in the brain, kidney and liver, and RAIG4 in the skin. RAIG1 is evolutionarily conserved from mammals to fish. RAIG1 has been to shown to act as a tumor suppressor in non-small cell lung carcinoma as well as oral squamous cell carcinoma, but it could also act as an oncogene in breast cancer, colorectal cancer, and pancreatic cancer. Studies have shown that overexpression of RAIG1 decreases intracellular cAMP levels. Moreover, knocking out RAIG1 induces the activation of the NF-kB and STAT3 signaling pathways leading to cell proliferation and resistance to apoptosis. RAIG2 (GPRC5B), a mammalian Boss (Bride of sevenless) homolog, activates obesity-associated inflammatory signaling in adipocytes, and GPRC5B knockout mice show resistance to high-fat diet-induced obesity and insulin resistance. The specific functions of RAIG3 and RAIG4 are unknown; however, they may play roles in mediating the effects of retinoic acid on embryogenesis, differentiation, and tumorigenesis through interactions with G-protein signaling pathways.


Pssm-ID: 320171  Cd Length: 248  Bit Score: 333.38  E-value: 3.43e-112
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 185 IWGIVVEAVAGAGALITLLLMLILLVRLPFIKEKEKKSPVGLHFLFLLGTLGLFGLTFAFIIQEDETICSVRRFLWGVLF 264
Cdd:cd15043    1 AWGIVLEAVAGAGVVTTVALMLILPILLPFVQDSNKRSMLGTQFLFLLGTLGLFGLTFAFIIGLDGSTCPTRRFLFGVLF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 265 ALCFSCLLSQAWRVRRLVRHGTGPAGWQLVGLALCLMLVQVIIAVEWLVLTVLRDT-----RPACAYEPMDFVMALIYDM 339
Cdd:cd15043   81 AICFSCLLAHAVSLTKLVRGRKGPSGWVILGLALGLSLVQVIIAIEWLVLTMNRTNvnvfsELSCARRNMDFVMALIYVM 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 340 VLLVVTLGLALFTLCGKFKRWKLNGAFLLITAFLSVLIWVAWMTMYLFGNvKLQQGDAWNDPTLAITLAASGWVFVIFHA 419
Cdd:cd15043  161 FLLALTFLMASFTLCGSFKRWKRHGAFILLTMLLSVAIWVAWITMYMLGN-VLQFDRRWDDPTLAIALAANGWVFVLFYV 239

                 ....*....
gi 755571572 420 IPEIHCTLL 428
Cdd:cd15043  240 IPEFWLLTK 248
7tmC_RAIG3_GPRC5C cd15277
retinoic acid-inducible orphan G-protein-coupled receptor 3; class C family of ...
185-423 1.56e-75

retinoic acid-inducible orphan G-protein-coupled receptor 3; class C family of seven-transmembrane G protein-coupled receptors, group 5, member C; Retinoic acid-inducible G-protein-coupled receptors (RAIGs), also referred to as GPCR class C group 5, are a group consisting of four orphan receptors RAIG1 (GPRC5A), RAIG2 (GPRC5B), RAIG3 (GPRC5C), and RAIG4 (GPRC5D). Unlike other members of the class C GPCRs which contain a large N-terminal extracellular domain, RAIGs have a shorter N-terminus. Thus, it is unlikely that RAIGs bind an agonist at its N-terminus domain. Instead, the agonists may bind to the seven-transmembrane domain of these receptors. In addition, RAIG2 and RAIG3 contain a cleavable signal peptide whereas RAIG1 and RAIG4 do not. Although their expression is induced by retinoic acid (vitamin A analog), their biological function is not clearly understood. To date, no ligand is known for the members of RAIG family. Three receptor types (RAIG1-3) are found in vertebrates, while RAIG4 is only present in mammals. They show distinct tissue distribution with RAIG1 being primarily expressed in the lung, RAIG2 in the brain and placenta, RAIG3 in the brain, kidney and liver, and RAIG4 in the skin. The specific function of RAIG3 is unknown; however, this protein may play a role in mediating the effects of retinoic acid on embryogenesis, differentiation, and tumorigenesis through interaction with a G-protein signaling cascade.


Pssm-ID: 320404  Cd Length: 250  Bit Score: 239.25  E-value: 1.56e-75
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 185 IWGIVVEAVAGAGALITLLLMLILLVRLPFIKEKEKKSPVGLHFLFLLGTLGLFGLTFAFIIQEDETICSVRRFLWGVLF 264
Cdd:cd15277    1 AWGIVLEAVAGAGVVTSFVLTIVLVASLPFVQDKKKKSLLGTQVFFLLGTLGLFCLVFAFIVGPNFATCASRRFLFGVLF 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 265 ALCFSCLLSQAWRVRRLVRHGTGPAGWQLVGLALCLMLVQVIIAVEWLVLTVLRDTRPA-------CAYEPMDFVMALIY 337
Cdd:cd15277   81 AICFSCLLAHAVRLNFLARRNRGPRGWVIFLLALGLWLVEVIINTEWLIITIVRGNAGSapvlgdpCNIANQDFVMALIY 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 338 DMVLLVVTLGLALFTLCGKFKRWKLNGAFLLITAFLSVLIWVAWMTMYLFGNVKLQQgDAWNDPTLAITLAASGWVFVIF 417
Cdd:cd15277  161 VMFLLLAAFITAWPALCGKYKHWRKHGAFILVTGFLSVAIWVAWIVMYVYGNQKVGQ-PYWDDPTLAIALVSNAWVFLFF 239

                 ....*.
gi 755571572 418 HAIPEI 423
Cdd:cd15277  240 YIIPEI 245
7tmC_RAIG1_4_GPRC5A_D cd15279
retinoic acid-inducible orphan G-protein-coupled receptors 1 and 4; class C family of ...
186-423 1.07e-52

retinoic acid-inducible orphan G-protein-coupled receptors 1 and 4; class C family of seven-transmembrane G protein-coupled receptors, group 5, member A and D; Retinoic acid-inducible G-protein-coupled receptors (RAIGs), also referred to as GPCR class C group 5, are a group consisting of four orphan receptors RAIG1 (GPRC5A), RAIG2 (GPRC5B), RAIG3 (GPRC5C), and RAIG4 (GPRC5D). Unlike other members of the class C GPCRs which contain a large N-terminal extracellular domain, RAIGs have a shorter N-terminus. Thus, it is unlikely that RAIGs bind an agonist at its N-terminus domain. Instead, the agonists may bind to the seven-transmembrane domain of these receptors. In addition, RAIG2 and RAIG3 contain a cleavable signal peptide whereas RAIG1 and RAIG4 do not. Although their expression is induced by retinoic acid (vitamin A analog), their biological function is not clearly understood. To date, no ligand is known for the members of RAIG family. Three receptor types (RAIG1-3) are found in vertebrates, while RAIG4 is only present in mammals. They show distinct tissue distribution with RAIG1 being primarily expressed in the lung, RAIG2 in the brain and placenta, RAIG3 in the brain, kidney and liver, and RAIG4 in the skin. RAIG1 is evolutionarily conserved from mammals to fish. RAIG1 has been to shown to act as a tumor suppressor in non-small cell lung carcinoma as well as oral squamous cell carcinoma, but it could also act as an oncogene in breast cancer, colorectal cancer, and pancreatic cancer. Studies have shown that overexpression of RAIG1 decreases intracellular cAMP levels. Moreover, knocking out RAIG1 induces the activation of the NF-kB and STAT3 signaling pathways leading to cell proliferation and resistance to apoptosis. The specific function of RAIG4 is unknown; however, this protein may play a role in mediating the effects of retinoic acid on embryogenesis, differentiation, and tumorigenesis through interaction with a G-protein signaling cascade.


Pssm-ID: 320406  Cd Length: 248  Bit Score: 179.19  E-value: 1.07e-52
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 186 WGIVVEAVAGAGALITLLLMLILLVRLPFIKEKEKKSPVGLHFLFLLGTLGLFGLTFAFIIQEDETICSVRRFLWGVLFA 265
Cdd:cd15279    2 WGIVLETLAAAGIVVTIALILALLFLMCKVQDSNKRKMLPTQFLFLLGVLGIFGLTFAFIIELNGQTGPTRFFLFGVLFA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 266 LCFSCLLSQAWRVRRLVRHGTGPAGWQLVGLALCLMLVQVIIAVEWLVLTVLRDTRPACAYEP-----MDFVMALIYDMV 340
Cdd:cd15279   82 ICFSCLLAHASNLVKLVRGRKPFSWLVILLLAVGFSLVQVVIAIEYIVLTMVRTNVNVFSEMTapqlnEDFVLLLIYVLF 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 341 LLVVTLGLALFTLCGKFKRWKLNGAFLLITAFLSVLIWVAWMTMYLFGNVKLQQgDAWNDPTLAITLAASGWVFVIFHAI 420
Cdd:cd15279  162 LMALTFLVSKFTFCGSCKGWKRHGAHIFVTMLFSIAIWVAWITMLLRGNPFQRN-RQWDDPVLSIALVANGWVFLLMYIV 240

                 ...
gi 755571572 421 PEI 423
Cdd:cd15279  241 PEL 243
7tm_3 pfam00003
7 transmembrane sweet-taste receptor of 3 GCPR; This is a domain of seven transmembrane ...
244-422 8.60e-23

7 transmembrane sweet-taste receptor of 3 GCPR; This is a domain of seven transmembrane regions that forms the C-terminus of some subclass 3 G-coupled-protein receptors. It is often associated with a downstream cysteine-rich linker domain, NCD3G pfam07562, which is the human sweet-taste receptor, and the N-terminal domain, ANF_receptor pfam01094. The seven TM regions assemble in such a way as to produce a docking pocket into which such molecules as cyclamate and lactisole have been found to bind and consequently confer the taste of sweetness.


Pssm-ID: 459626 [Multi-domain]  Cd Length: 247  Bit Score: 97.35  E-value: 8.60e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572  244 FIIQEDETICSVRRFLWGVLFALCFSCLLSQAWRV-RRLVRHGTGPAGWQLVGLALCLMLVQVIIAVEWLVLTVLRDTRP 322
Cdd:pfam00003  62 LFIGKPTVTCALRRFLFGVGFTLCFSCLLAKTFRLvLIFRRRKPGPRGWQLLLLALGLLLVQVIILTEWLIDPPFPEKDN 141
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572  323 A--------CAYEPMD--FVMALIYDMVLLVVTLGLAlftlcgkFKRWKLNGAF-----LLITAFLSVLIWVAWMTMYLF 387
Cdd:pfam00003 142 LsegkiileCEGSTSIafLDFVLAYVGLLLLAGFLLA-------FKTRKLPDNFneakfITFSMLLSVLIWVAFIPMYLY 214
                         170       180       190
                  ....*....|....*....|....*....|....*..
gi 755571572  388 GNvklqQGDAWNDPTLAITLA--ASGWVFVIFHAIPE 422
Cdd:pfam00003 215 GN----KGKGTWDPVALAIFAilASGWVLLGLYFIPK 247
7tm_classC_mGluR-like cd13953
metabotropic glutamate receptor-like class C family of seven-transmembrane G protein-coupled ...
243-424 2.00e-22

metabotropic glutamate receptor-like class C family of seven-transmembrane G protein-coupled receptors superfamily; The class C GPCRs consist of glutamate receptors (mGluR1-8), the extracellular calcium-sensing receptors (caSR), the gamma-amino-butyric acid type B receptors (GABA-B), the vomeronasal type-2 pheromone receptors (V2R), the type 1 taste receptors (TAS1R), and the promiscuous L-alpha-amino acid receptor (GPRC6A), as well as several orphan receptors. Structurally, these receptors are typically composed of a large extracellular domain containing a Venus flytrap module which possesses the orthosteric agonist-binding site, a cysteine-rich domain (CRD) with the exception of GABA-B receptors, and the seven-transmembrane domains responsible for G protein activation. Moreover, the Venus flytrap module shows high structural homology with bacterial periplasmic amino acid-binding proteins, which serve as primary receptors in transport of a variety of soluble substrates such as amino acids and polysaccharides, among many others. The class C GPCRs exist as either homo- or heterodimers, which are essential for their function. The GABA-B1 and GABA-B2 receptors form a heterodimer via interactions between the N-terminal Venus flytrap modules and the C-terminal coiled-coiled domains. On the other hand, heterodimeric CaSRs and Tas1Rs and homodimeric mGluRs utilize Venus flytrap interactions and intermolecular disulphide bonds between cysteine residues located in the cysteine-rich domain (CRD), which can also acts as a molecular link to mediate the signal between the Venus flytrap and the 7TMs. Furthermore, members of the class C GPCRs bind a variety of endogenous ligands, ranging from amino acids, ions, to pheromones and sugar molecules, and play important roles in many physiological processes such as synaptic transmission, calcium homeostasis, and the sensation of sweet and umami tastes.


Pssm-ID: 320091 [Multi-domain]  Cd Length: 251  Bit Score: 96.54  E-value: 2.00e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 243 AFIIQEDETICSVRRFLWGVLFALCFSCLLSQAWRVRRLVRHGTGPA--------GWQLVgLALCLMLVQVIIAVEWLVL 314
Cdd:cd13953   57 LFLLPPSDVLCGLRRFLFGLSFTLVFSTLLVKTNRIYRIFKSGLRSSlrpkllsnKSQLL-LVLFLLLVQVAILIVWLIL 135
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 315 ---TVLRDTRPACAYEPM-------DFVMALIYDMVLLVVTLGLAlftlcgkFKRWKL-----NGAFLLITAFLSVLIWV 379
Cdd:cd13953  136 dppKVEKVIDSDNKVVELccstgniGLILSLVYNILLLLICTYLA-------FKTRKLpdnfnEARYIGFSSLLSLVIWI 208
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 755571572 380 AWMTMYLFGNVKLQqgdawnDPTLAITLAASGWVFVIFHAIPEIH 424
Cdd:cd13953  209 AFIPTYFTTSGPYR------DAILSFGLLLNATVLLLCLFLPKIY 247
7tmC_mGluRs cd15045
metabotropic glutamate receptors, member of the class C family of seven-transmembrane G ...
243-387 2.29e-09

metabotropic glutamate receptors, member of the class C family of seven-transmembrane G protein-coupled receptors; The metabotropic glutamate receptors (mGluRs) are homodimeric class C G-protein coupled receptors which are activated by glutamate, the major excitatory neurotransmitter of the CNS. mGluRs are involved in regulating neuronal excitability and synaptic transmission via intracellular activation of second messenger signaling pathways. While the ionotropic glutamate receptor subtypes (AMPA, NMDA, and kainite) mediate fast excitatory postsynaptic transmission, mGluRs are known to mediate slower excitatory postsynaptic responses and to be involved in synaptic plasticity in the mammalian brain. In addition to seven-transmembrane helices, the class C GPCRs are characterized by a large N-terminal extracellular Venus flytrap-like domain, which is composed of two adjacent lobes separated by a cleft which binds an endogenous ligand. Moreover, they exist as either homo- or heterodimers, which are essential for their function. For instance, mGluRs form homodimers via interactions between the N-terminal Venus flytrap domains and the intermolecular disulphide bonds between cysteine residues located in the cysteine-rich domain (CRD). At least eight different subtypes of metabotropic receptors (mGluR1-8) have been identified and further classified into three groups based on their sequence homology, pharmacological properties, and signaling pathways. Group 1 (mGluR1 and mGluR5) receptors are predominantly located postsynaptically on neurons and are involved in long-term synaptic plasticity in the brain, including long-term potentiation (LTP) in the hippocampus and long-term depression (LTD) in the cerebellum. They are coupled to G(q/11) proteins, thereby activating phospholipase C to generate inositol-1,4,5-triphosphate (IP3) and diacyglycerol (DAG), which in turn lead to Ca2+ release and protein kinase C activation, respectively. Group I mGluR expression is shown to be strongly upregulated in animal models of epilepsy, brain injury, inflammatory, and neuropathic pain, as well as in patients with amyotrophic lateral sclerosis or multiple sclerosis. Group 2 (mGluR2 and mGluR3) and 3 (mGluR4, mGluR6, mGluR7, and mGluR8) receptors are predominantly localized presynaptically in the active region of neurotransmitter release. They are coupled to (Gi/o) proteins, which leads to inhibition of adenylate cyclase activity and cAMP formation, and consequently to a decrease in protein kinase A (PKA) activity. Ultimately, activation of these receptors leads to inhibition of neurotransmitter release such as glutamate and GABA via inhibition of Ca2+ channels and activation of K+ channels. Furthermore, while activation of Group 1 mGluRs increases NMDA (N-methyl-D-aspartate) receptor activity and risk of neurotoxicity, Group 2 and 3 mGluRs decrease NMDA receptor activity and prevent neurotoxicity.


Pssm-ID: 320173 [Multi-domain]  Cd Length: 253  Bit Score: 58.03  E-value: 2.29e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 243 AFIIQEDETICSVRRFLWGVLFALCFSCLLSQAWRVRRLVRHGTGPA--------GWQLVgLALCLMLVQVIIAVEWLVL 314
Cdd:cd15045   57 VLVAKPSTIVCGLQRFGLGLCFTVCYAAILTKTNRIARIFRLGKKSAkrprfispRSQLV-ITGLLVSVQVLVLAVWLIL 135
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 315 ----TVL----RDTRP--ACAYEPMDFVMALIYDMVLLVVTLGLAlftlcgkFKRWKLNGAF-----LLITAFLSVLIWV 379
Cdd:cd15045  136 spprATHhyptRDKNVlvCSSALDASYLIGLAYPILLIILCTVYA-------FKTRKIPEGFneakyIGFTMYTTCIIWL 208

                 ....*...
gi 755571572 380 AWMTMYLF 387
Cdd:cd15045  209 AFVPLYFT 216
7tmC_mGluR3 cd15448
metabotropic glutamate receptor 3 in group 2, member of the class C family of ...
244-428 6.11e-08

metabotropic glutamate receptor 3 in group 2, member of the class C family of seven-transmembrane G protein-coupled receptors; The metabotropic glutamate receptors (mGluRs) in group 2 include mGluR 2 and 3. They are homodimeric class C G-protein coupled receptors which are activated by glutamate, the major excitatory neurotransmitter of the CNS. mGluRs are involved in regulating neuronal excitability and synaptic transmission via intracellular activation of second messenger signaling pathways. While the ionotropic glutamate receptor subtypes (AMPA, NMDA, and kainite) mediate fast excitatory postsynaptic transmission, mGluRs are known to mediate slower excitatory postsynaptic responses and to be involved in synaptic plasticity in the mammalian brain. In addition to seven-transmembrane helices, the class C GPCRs are characterized by a large N-terminal extracellular Venus flytrap-like domain, which is composed of two adjacent lobes separated by a cleft which binds an endogenous ligand. Moreover, they exist as either homo- or heterodimers, which are essential for their function. For instance, mGluRs form homodimers via interactions between the N-terminal Venus flytrap domains and the intermolecular disulphide bonds between cysteine residues located in the cysteine-rich domain (CRD). At least eight different subtypes of metabotropic receptors (mGluR1-8) have been identified and further classified into three groups based on their sequence homology, pharmacological properties, and signaling pathways. Group 1 (mGluR1 and mGluR5) receptors are predominantly located postsynaptically on neurons and are involved in long-term synaptic plasticity in the brain, including long-term potentiation (LTP) in the hippocampus and long-term depression (LTD) in the cerebellum. They are coupled to G(q/11) proteins, thereby activating phospholipase C to generate inositol-1,4,5-triphosphate (IP3) and diacyglycerol (DAG), which in turn lead to Ca2+ release and protein kinase C activation, respectively. Group 1 mGluR expression is shown to be strongly upregulated in animal models of epilepsy, brain injury, inflammatory, and neuropathic pain, as well as in patients with amyotrophic lateral sclerosis or multiple sclerosis. Group 2 (mGluR2 and mGluR3) and 3 (mGluR4, mGluR6, mGluR7, and mGluR8) receptors are predominantly localized presynaptically in the active region of neurotransmitter release. They are coupled to G(i/o) proteins, which leads to inhibition of adenylate cyclase activity and cAMP formation, and consequently to a decrease in protein kinase A (PKA) activity. Ultimately, activation of these receptors leads to inhibition of neurotransmitter release such as glutamate and GABA via inhibition of Ca2+ channels and activation of K+ channels. Furthermore, while activation of Group 1 mGluRs increases NMDA (N-methyl-D-aspartate) receptor activity and risk of neurotoxicity, Group 2 and 3 mGluRs decrease NMDA receptor activity and prevent neurotoxicity.


Pssm-ID: 320564  Cd Length: 254  Bit Score: 53.80  E-value: 6.11e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 244 FIIQEDETICSVRRFLWGVLFALCFSCLLSQAWRVRRL---VRHGTGPAGW----QLVGLALCLMLVQVIIAVEWLVLTV 316
Cdd:cd15448   58 FIAKPSPVICTLRRLGLGTSFAVCYSALLTKTNCIARIfdgVKNGAQRPKFispsSQVFICLSLILVQIVVVSVWLILEA 137
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 317 ---LRDTRP--------ACAYEPMDFVMALIYDMVLLVVTLGLALFTL-CGK-FKRWKlngaFLLITAFLSVLIWVAWMT 383
Cdd:cd15448  138 pgtRRYTLPekretvilKCNVKDSSMLISLTYDVVLVILCTVYAFKTRkCPEnFNEAK----FIGFTMYTTCIIWLAFLP 213
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 755571572 384 MYLF--GNVKLQQgdawndPTLAITLAASGWVFVIFHAIPEIHCTLL 428
Cdd:cd15448  214 IFYVtsSDYRVQT------TTMCISVSLSGFVVLGCLFAPKVHIILF 254
7tmC_mGluRs_group2_3 cd15934
metabotropic glutamate receptors in group 2 and 3, member of the class C family of ...
251-413 1.07e-07

metabotropic glutamate receptors in group 2 and 3, member of the class C family of seven-transmembrane G protein-coupled receptors; The metabotropic glutamate receptors (mGluRs) are homodimeric class C G-protein coupled receptors which are activated by glutamate, the major excitatory neurotransmitter of the CNS. The mGluRs are involved in regulating neuronal excitability and synaptic transmission via intracellular activation of second messenger signaling pathways. While the ionotropic glutamate receptor subtypes (AMPA, NMDA, and kainite) mediate fast excitatory postsynaptic transmission, mGluRs are known to mediate slower excitatory postsynaptic responses and to be involved in synaptic plasticity in the mammalian brain. In addition to seven-transmembrane helices, the class C GPCRs are characterized by a large N-terminal extracellular Venus flytrap-like domain, which is composed of two adjacent lobes separated by a cleft which binds an endogenous ligand. Moreover, they exist as either homo- or heterodimers, which are essential for their function. For instance, mGluRs form homodimers via interactions between the N-terminal Venus flytrap domains and the intermolecular disulphide bonds between cysteine residues located in the cysteine-rich domain (CRD). At least eight different subtypes of metabotropic receptors (mGluR1-8) have been identified and further classified into three groups based on their sequence homology, pharmacological properties, and signaling pathways. Group 1 (mGluR1 and mGluR5) receptors are predominantly located postsynaptically on neurons and are involved in long-term synaptic plasticity in the brain, including long-term potentiation (LTP) in the hippocampus and long-term depression (LTD) in the cerebellum. They are coupled to G(q/11) proteins, thereby activating phospholipase C to generate inositol-1,4,5-triphosphate (IP3) and diacyglycerol (DAG), which in turn lead to Ca2+ release and protein kinase C activation, respectively. Group I mGluR expression is shown to be strongly upregulated in animal models of epilepsy, brain injury, inflammatory, and neuropathic pain, as well as in patients with amyotrophic lateral sclerosis or multiple sclerosis. Group 2 (mGluR2 and mGluR3) and 3 (mGluR4, mGluR6, mGluR7, and mGluR8) receptors are predominantly localized presynaptically in the active region of neurotransmitter release. They are coupled to (Gi/o) proteins, which leads to inhibition of adenylate cyclase activity and cAMP formation, and consequently to a decrease in protein kinase A (PKA) activity. Ultimately, activation of these receptors leads to inhibition of neurotransmitter release such as glutamate and GABA via inhibition of Ca2+ channels and activation of K+ channels. Furthermore, while activation of Group 1 mGluRs increases NMDA (N-methyl-D-aspartate) receptor activity and risk of neurotoxicity, Group 2 and 3 mGluRs decrease NMDA receptor activity and prevent neurotoxicity.


Pssm-ID: 320600  Cd Length: 252  Bit Score: 53.00  E-value: 1.07e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 251 TICSVRRFLWGVLFALCFSCLLSQAWRVRRLVRHG---------TGPAGwQLVgLALCLMLVQVIIAVEWLVL----TVL 317
Cdd:cd15934   65 ITCALRRLGLGLGFSICYAALLTKTNRISRIFNSGkrsakrprfISPKS-QLV-ICLGLISVQLIGVLVWLVVeppgTRI 142
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 318 RDTRPA-----CAYEPMDFVMALIYDMVLLVVTLGLAlftlcgkFKRWKL----NGA-FLLITAFLSVLIWVAWMTMYlF 387
Cdd:cd15934  143 DYPRRDqvvlkCKISDSSLLISLVYNMLLIILCTVYA-------FKTRKIpenfNEAkFIGFTMYTTCIIWLAFVPIY-F 214
                        170       180
                 ....*....|....*....|....*....
gi 755571572 388 G---NVKLQQgdawndPTLAITLAASGWV 413
Cdd:cd15934  215 GtsnDFKIQT------TTLCVSISLSASV 237
7tmC_Boss cd15042
Bride of sevenless, member of the class C family of seven-transmembrane G protein-coupled ...
250-424 2.00e-07

Bride of sevenless, member of the class C family of seven-transmembrane G protein-coupled receptors; Bride of Sevenless (Boss) is a putative Drosophila melanogaster G protein-coupled receptor that functions as a glucose-responding receptor to regulate energy metabolism. Boss is expressed predominantly in the fly's fat body, a nutrient-sensing tissue functionally analogous to the mammalian liver and adipose tissues, and in photoreceptor cells. Boss, which is expressed on the surface of R8 photoreceptor cell, binds and activates the Sevenless receptor tyrosine kinase on the neighboring R7 precursor cell. Activation of Sevenless results in phosphorylation of the Sevenless, triggering a signaling transduction cascade through Ras pathway that ultimately leads to the differentiation of the R7 precursor into a fully functional R7 photoreceptor, the last of eight photoreceptors to differentiate in each ommatidium of the developing Drosophila eye. In the absence of either of Sevenless or Boss, the R7 precursor fails to differentiate as a photoreceptor and instead develops into a non-neuronal cone cell. Moreover, Boss mutants in Drosophila showed elevated food intake, but reduced stored triglyceride levels, suggesting that Boss may play a role in regulating energy homeostasis in nutrient sensing tissues. Furthermore, GPRC5B, a mammalian Boss homolog, activates obesity-associated inflammatory signaling in adipocytes, and that the GPRC5B knockout mice showed resistance to high-fat diet-induced obesity and insulin resistance.


Pssm-ID: 320170  Cd Length: 238  Bit Score: 52.04  E-value: 2.00e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 250 ETICSVRRFLWGVLFALCFSCLLSQAWRVRR------LVRHGTGPAgwQLVgLALCLMLVQVIIAVEWLVLTvlrDTRPA 323
Cdd:cd15042   68 NSLCAVRILLTTLAFGFTFSLMLSRALFLALstgeggFLSHVNGYL--QSV-MCLFSFGVQVAMSVQYFVLN---HANSA 141
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 324 CAYEPMDFVMALIYDMVLLvvtlgLALFTLCGKFKRWKLN---GAFLLITAFLSVLIWVAWMTMYLFgnvklqQGDAWND 400
Cdd:cd15042  142 VIYRGLWFIALLGYDIFLL-----IALFVLCPFIFRSQRNyreGKYFFGASIGLLVIWVIWLPCFLL------MGPEWRD 210
                        170       180
                 ....*....|....*....|....
gi 755571572 401 PTLAITLAASGWVFVIFHAIPEIH 424
Cdd:cd15042  211 AVISFGLVATAYAILVGILVPRTY 234
7tmC_mGluR_group2 cd15284
metabotropic glutamate receptors in group 2, member of the class C family of ...
244-427 5.29e-07

metabotropic glutamate receptors in group 2, member of the class C family of seven-transmembrane G protein-coupled receptors; The metabotropic glutamate receptors (mGluRs) in group 2 include mGluR 2 and 3. They are homodimeric class C G-protein coupled receptors which are activated by glutamate, the major excitatory neurotransmitter of the CNS. mGluRs are involved in regulating neuronal excitability and synaptic transmission via intracellular activation of second messenger signaling pathways. While the ionotropic glutamate receptor subtypes (AMPA, NMDA, and kainite) mediate fast excitatory postsynaptic transmission, mGluRs are known to mediate slower excitatory postsynaptic responses and to be involved in synaptic plasticity in the mammalian brain. In addition to seven-transmembrane helices, the class C GPCRs are characterized by a large N-terminal extracellular Venus flytrap-like domain, which is composed of two adjacent lobes separated by a cleft which binds an endogenous ligand. Moreover, they exist as either homo- or heterodimers, which are essential for their function. For instance, mGluRs form homodimers via interactions between the N-terminal Venus flytrap domains and the intermolecular disulphide bonds between cysteine residues located in the cysteine-rich domain (CRD). At least eight different subtypes of metabotropic receptors (mGluR1-8) have been identified and further classified into three groups based on their sequence homology, pharmacological properties, and signaling pathways. Group 1 (mGluR1 and mGluR5) receptors are predominantly located postsynaptically on neurons and are involved in long-term synaptic plasticity in the brain, including long-term potentiation (LTP) in the hippocampus and long-term depression (LTD) in the cerebellum. They are coupled to G(q/11) proteins, thereby activating phospholipase C to generate inositol-1,4,5-triphosphate (IP3) and diacyglycerol (DAG), which in turn lead to Ca2+ release and protein kinase C activation, respectively. Group 1 mGluR expression is shown to be strongly upregulated in animal models of epilepsy, brain injury, inflammatory, and neuropathic pain, as well as in patients with amyotrophic lateral sclerosis or multiple sclerosis. Group 2 (mGluR2 and mGluR3) and 3 (mGluR4, mGluR6, mGluR7, and mGluR8) receptors are predominantly localized presynaptically in the active region of neurotransmitter release. They are coupled to G(i/o) proteins, which leads to inhibition of adenylate cyclase activity and cAMP formation, and consequently to a decrease in protein kinase A (PKA) activity. Ultimately, activation of these receptors leads to inhibition of neurotransmitter release such as glutamate and GABA via inhibition of Ca2+ channels and activation of K+ channels. Furthermore, while activation of Group 1 mGluRs increases NMDA (N-methyl-D-aspartate) receptor activity and risk of neurotoxicity, Group 2 and 3 mGluRs decrease NMDA receptor activity and prevent neurotoxicity.


Pssm-ID: 320411  Cd Length: 254  Bit Score: 51.00  E-value: 5.29e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 244 FIIQEDETICSVRRFLWGVLFALCFSCLLSQAWRVRRL---VRHGT------GPAgwQLVGLALCLMLVQVIIAVEWLVL 314
Cdd:cd15284   58 FIAKPSPAICTLRRLGLGTSFAVCYSALLTKTNRIARIfsgVKDGAqrprfiSPS--SQVFICLALISVQLLVVSVWLLV 135
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 315 T---VLRDTRP--------ACAYEPMDFVMALIYDMVLLVVTLGLAlftlcgkFKRWK----LNGA-FLLITAFLSVLIW 378
Cdd:cd15284  136 EapgTRRYTLPekretvilKCNVRDSSMLISLTYDVVLVILCTVYA-------FKTRKcpenFNEAkFIGFTMYTTCIIW 208
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 755571572 379 VAWMTMYLF--GNVKLQQgdawndPTLAITLAASGWVFVIFHAIPEIHCTL 427
Cdd:cd15284  209 LAFLPIFYVtsSDYRVQT------TTMCISVSLSGFVVLGCLFAPKVHIIL 253
7tmC_mGluR2 cd15447
metabotropic glutamate receptor 2 in group 2, member of the class C family of ...
244-428 1.11e-06

metabotropic glutamate receptor 2 in group 2, member of the class C family of seven-transmembrane G protein-coupled receptors; The metabotropic glutamate receptors (mGluRs) in group 2 include mGluR 2 and 3. They are homodimeric class C G-protein coupled receptors which are activated by glutamate, the major excitatory neurotransmitter of the CNS. mGluRs are involved in regulating neuronal excitability and synaptic transmission via intracellular activation of second messenger signaling pathways. While the ionotropic glutamate receptor subtypes (AMPA, NMDA, and kainite) mediate fast excitatory postsynaptic transmission, mGluRs are known to mediate slower excitatory postsynaptic responses and to be involved in synaptic plasticity in the mammalian brain. In addition to seven-transmembrane helices, the class C GPCRs are characterized by a large N-terminal extracellular Venus flytrap-like domain, which is composed of two adjacent lobes separated by a cleft which binds an endogenous ligand. Moreover, they exist as either homo- or heterodimers, which are essential for their function. For instance, mGluRs form homodimers via interactions between the N-terminal Venus flytrap domains and the intermolecular disulphide bonds between cysteine residues located in the cysteine-rich domain (CRD). At least eight different subtypes of metabotropic receptors (mGluR1-8) have been identified and further classified into three groups based on their sequence homology, pharmacological properties, and signaling pathways. Group 1 (mGluR1 and mGluR5) receptors are predominantly located postsynaptically on neurons and are involved in long-term synaptic plasticity in the brain, including long-term potentiation (LTP) in the hippocampus and long-term depression (LTD) in the cerebellum. They are coupled to G(q/11) proteins, thereby activating phospholipase C to generate inositol-1,4,5-triphosphate (IP3) and diacyglycerol (DAG), which in turn lead to Ca2+ release and protein kinase C activation, respectively. Group 1 mGluR expression is shown to be strongly upregulated in animal models of epilepsy, brain injury, inflammatory, and neuropathic pain, as well as in patients with amyotrophic lateral sclerosis or multiple sclerosis. Group 2 (mGluR2 and mGluR3) and 3 (mGluR4, mGluR6, mGluR7, and mGluR8) receptors are predominantly localized presynaptically in the active region of neurotransmitter release. They are coupled to G(i/o) proteins, which leads to inhibition of adenylate cyclase activity and cAMP formation, and consequently to a decrease in protein kinase A (PKA) activity. Ultimately, activation of these receptors leads to inhibition of neurotransmitter release such as glutamate and GABA via inhibition of Ca2+ channels and activation of K+ channels. Furthermore, while activation of Group 1 mGluRs increases NMDA (N-methyl-D-aspartate) receptor activity and risk of neurotoxicity, Group 2 and 3 mGluRs decrease NMDA receptor activity and prevent neurotoxicity.


Pssm-ID: 320563  Cd Length: 254  Bit Score: 49.93  E-value: 1.11e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 244 FIIQEDETICSVRRFLWGVLFALCFSCLLSQAWRVRRL---VRHGT------GPAgwQLVGLALCLMLVQVIIAVEWLVL 314
Cdd:cd15447   58 FIAKPSTAVCTLRRLGLGTSFAVCYSALLTKTNRIARIfsgAKDGAqrprfiSPA--SQVAICLALISCQLLVVLIWLLV 135
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 315 T---VLRDTRP--------ACAYEPMDFVMALIYDMVLLVVTLGLAlftlcgkFKRWK----LNGA-FLLITAFLSVLIW 378
Cdd:cd15447  136 EapgTRKETAPerryvvtlKCNSRDSSMLISLTYNVLLIILCTLYA-------FKTRKcpenFNEAkFIGFTMYTTCIIW 208
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 755571572 379 VAWMTMYLF--GNVKLQQgdawndPTLAITLAASGWVFVIFHAIPEIHCTLL 428
Cdd:cd15447  209 LAFLPIFYVtsSDYRVQT------TTMCISVSLSGSVVLGCLFAPKLHIILF 254
7tmC_V2R_pheromone cd15283
vomeronasal type-2 pheromone receptors, member of the class C family of seven-transmembrane G ...
244-314 1.40e-03

vomeronasal type-2 pheromone receptors, member of the class C family of seven-transmembrane G protein-coupled receptors; This group represents vomeronasal type-2 pheromone receptors (V2Rs). Members of the V2R family of vomeronasal GPCRs are involved in detecting protein pheromones for social and sexual cues between the same species. V2Rs and G-alpha(o) protein are coexpressed in the basal layer of the vomeronasal organ (VNO), which is the sensory organ of the accessory olfactory system present in amphibians, reptiles, and non-primate mammals such as mice and rodents, but it is non-functional or absent in humans, apes, and monkeys. On the other hand, members of the V1R receptor family and G-alpha(i2) protein are coexpressed in the apical neurons of the VNO. Activation of V1R or V2R causes activation of phospholipase pathway, producing the second messengers diacylglycerol (DAG) and IP3. However, in contrast to V1Rs, V2Rs contain the long N-terminal extracellular domain, which is believed to bind pheromones.


Pssm-ID: 320410 [Multi-domain]  Cd Length: 252  Bit Score: 40.72  E-value: 1.40e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 755571572 244 FIIQEDETICSVRRFLWGVLFALCFSCLLSQAWRVrRLVRHGTGPAGW--------QLVGLALCLMLVQVIIAVEWLVL 314
Cdd:cd15283   58 FIGQPSTWTCMLRQTAFGISFVLCISCILAKTIVV-VAAFKATRPGSNimkwfgpgQQRAIIFICTLVQVVICAIWLAT 135
7tmC_GABA-B-like cd15047
gamma-aminobutyric acid type B receptor and related proteins, member of the class C family of ...
251-421 3.14e-03

gamma-aminobutyric acid type B receptor and related proteins, member of the class C family of seven-transmembrane G protein-coupled receptors; The type B receptor for gamma-aminobutyric acid, GABA-B, is activated by its endogenous ligand GABA, the principal inhibitory neurotransmitter. The functional GABA-B receptor is an obligatory heterodimer composed of two related subunits, GABA-B1, which is primarily involved in GABA ligand binding, and GABA-B2, which is responsible for both G-protein coupling and trafficking of the heterodimer to the plasma membrane. Activation of GABA-B couples to G(i/o)-type G proteins, which in turn modulate three major downstream effectors: adenylate cyclase, voltage-sensitive Ca2+ channels, and inwardly-rectifying K+ channels. Consequently, GABA-B receptor produces slow and sustained inhibitory responses by decreased neurotransmitter release via inhibition of Ca2+ channels and by postsynaptic hyperpolarization via the activation of K+ channels through the G-protein beta-gamma dimer. The GABA-B is expressed in both pre- and postsynaptic sites of glutamatergic and GABAergic neurons in the brain where it regulates synaptic activity. Thus, the GABA-B receptor agonist, baclofen, is used to treat muscle tightness and cramping caused by spasticity in multiple sclerosis patients. Moreover, GABA-B antagonists improves cognitive performance in mammals, while GABA-B agonists suppress cognitive behavior. In most of the class C family members, the extracellular Venus-flytrap domain in the N-terminus is connected to the seven-transmembrane (7TM) via a cysteine-rich domain (CRD). However, in the GABA-B receptor, the CRD is absent in both subunits and the Venus-flytrap ligand-binding domain is directly connected to the 7TM via a 10-15 amino acids linker, suggesting that GABA-B receptor may utilize a different activation mechanism. Also included in this group are orphan receptors, GPR156 and GPR158, which are closely related to the GABA-B receptor family.


Pssm-ID: 320175  Cd Length: 263  Bit Score: 39.47  E-value: 3.14e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 251 TICSVRRFLWGVLFALCFSCLLSQAWRVRRLVRHGTGPAG----WQLVGLALCLMLVQVIIAVEWLVL--------TVLR 318
Cdd:cd15047   68 FLCTARPWLLSIGFTLVFGALFAKTWRIYRIFTNKKLKRIvikdKQLLKIVGILLLIDIIILILWTIVdplkptrvLVLS 147
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 319 DTRPACAYEPMDFVMALIYDMVLLVVTLGlalftlcgkfkrwkLNGAFLLITAFLsvliwvAWMTmylfGNVKLQqgdAW 398
Cdd:cd15047  148 EISDDVKYEYVVHCCSSSNGIIWLGILLA--------------YKGLLLLFGCFL------AWKT----RNVDIE---EF 200
                        170       180
                 ....*....|....*....|...
gi 755571572 399 NDPTLaITLAASGWVFVIFHAIP 421
Cdd:cd15047  201 NESKY-IGISIYNVLFLSVIGVP 222
7tmC_mGluR6 cd15453
metabotropic glutamate receptor 6 in group 3, member of the class C family of ...
251-428 3.69e-03

metabotropic glutamate receptor 6 in group 3, member of the class C family of seven-transmembrane G protein-coupled receptors; The receptors in group 3 include mGluRs 4, 6, 7, and 8. They are homodimeric class C G-protein coupled receptors which are activated by glutamate, the major excitatory neurotransmitter of the CNS. mGluRs are involved in regulating neuronal excitability and synaptic transmission via intracellular activation of second messenger signaling pathways. While the ionotropic glutamate receptor subtypes (AMPA, NMDA, and kainite) mediate fast excitatory postsynaptic transmission, mGluRs are known to mediate slower excitatory postsynaptic responses and to be involved in synaptic plasticity in the mammalian brain. In addition to seven-transmembrane helices, the class C GPCRs are characterized by a large N-terminal extracellular Venus flytrap-like domain, which is composed of two adjacent lobes separated by a cleft which binds an endogenous ligand. Moreover, they exist as either homo- or heterodimers, which are essential for their function. For instance, mGluRs form homodimers via interactions between the N-terminal Venus flytrap domains and the intermolecular disulphide bonds between cysteine residues located in the cysteine-rich domain (CRD). At least eight different subtypes of metabotropic receptors (mGluR1-8) have been identified and further classified into three groups based on their sequence homology, pharmacological properties, and signaling pathways. Group 1 (mGluR1 and mGluR5) receptors are predominantly located postsynaptically on neurons and are involved in long-term synaptic plasticity in the brain, including long-term potentiation (LTP) in the hippocampus and long-term depression (LTD) in the cerebellum. They are coupled to G(q/11) proteins, thereby activating phospholipase C to generate inositol-1,4,5-triphosphate (IP3) and diacyglycerol (DAG), which in turn lead to Ca2+ release and protein kinase C activation, respectively. Group 1 mGluR expression is shown to be strongly upregulated in animal models of epilepsy, brain injury, inflammatory, and neuropathic pain, as well as in patients with amyotrophic lateral sclerosis or multiple sclerosis. Group 2 (mGluR2 and mGluR3) and 3 (mGluR4, mGluR6, mGluR7, and mGluR8) receptors are predominantly localized presynaptically in the active region of neurotransmitter release. They are coupled to G(i/o) proteins, which leads to inhibition of adenylate cyclase activity and cAMP formation, and consequently to a decrease in protein kinase A (PKA) activity. Ultimately, activation of these receptors leads to inhibition of neurotransmitter release such as glutamate and GABA via inhibition of Ca2+ channels and activation of K+ channels. Furthermore, while activation of Group 1 mGluRs increases NMDA (N-methyl-D-aspartate) receptor activity and risk of neurotoxicity, Group 2 and 3 mGluRs decrease NMDA receptor activity and prevent neurotoxicity.


Pssm-ID: 320569 [Multi-domain]  Cd Length: 273  Bit Score: 39.24  E-value: 3.69e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 251 TICSVRRFLWGVLFALCFSCLLSQAWRVRRLVRHG----TGPA----GWQLVgLALCLMLVQVIIAVEWLVL----TVL- 317
Cdd:cd15453   65 AVCAFRRLFLGLGTTLSYSALLTKTNRIYRIFEQGkrsvTPPPfispTSQLV-ITFSLTSLQVVGVIAWLGAqpphSVId 143
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 318 ----RDTRP-------ACAYEPMDFVMALIYDMVLLVVTLGLALFT--LCGKFKRWKLNGafllITAFLSVLIWVAWMTM 384
Cdd:cd15453  144 yeeqRTVDPeqargvlKCDMSDLSLIGCLGYSLLLMVTCTVYAIKArgVPETFNEAKPIG----FTMYTTCIIWLAFVPI 219
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....
gi 755571572 385 YlFGNVKLQQGDAWNDPTLAITLAASGWVFVIFHAIPEIHCTLL 428
Cdd:cd15453  220 F-FGTAQSAEKIYIQTTTLTVSLSLSASVSLGMLYVPKTYVILF 262
7tmC_mGluR_group1 cd15285
metabotropic glutamate receptors in group 1, member of the class C family of ...
251-391 5.40e-03

metabotropic glutamate receptors in group 1, member of the class C family of seven-transmembrane G protein-coupled receptors; Group 1 mGluRs includes mGluR1 and mGluR5, as well as their closely related invertebrate receptors. They are homodimeric class C G-protein coupled receptors which are activated by glutamate, the major excitatory neurotransmitter of the CNS. mGluRs are involved in regulating neuronal excitability and synaptic transmission via intracellular activation of second messenger signaling pathways. While the ionotropic glutamate receptor subtypes (AMPA, NMDA, and kainite) mediate fast excitatory postsynaptic transmission, mGluRs are known to mediate slower excitatory postsynaptic responses and to be involved in synaptic plasticity in the mammalian brain. In addition to seven-transmembrane helices, the class C GPCRs are characterized by a large N-terminal extracellular Venus flytrap-like domain, which is composed of two adjacent lobes separated by a cleft which binds an endogenous ligand. Moreover, they exist as either homo- or heterodimers, which are essential for their function. For instance, mGluRs form homodimers via interactions between the N-terminal Venus flytrap domains and the intermolecular disulphide bonds between cysteine residues located in the cysteine-rich domain (CRD). At least eight different subtypes of metabotropic receptors (mGluR1-8) have been identified and further classified into three groups based on their sequence homology, pharmacological properties, and signaling pathways. Group 1 (mGluR1 and mGluR5) receptors are predominantly located postsynaptically on neurons and are involved in long-term synaptic plasticity in the brain, including long-term potentiation (LTP) in the hippocampus and long-term depression (LTD) in the cerebellum. They are coupled to G(q/11) proteins, thereby activating phospholipase C to generate inositol-1,4,5-triphosphate (IP3) and diacyglycerol (DAG), which in turn lead to Ca2+ release and protein kinase C activation, respectively. Group 1 mGluR expression is shown to be strongly upregulated in animal models of epilepsy, brain injury, inflammatory, and neuropathic pain, as well as in patients with amyotrophic lateral sclerosis or multiple sclerosis. Group 2 (mGluR2 and mGluR3) and 3 (mGluR4, mGluR6, mGluR7, and mGluR8) receptors are predominantly localized presynaptically in the active region of neurotransmitter release. They are coupled to G(i/o) proteins, which leads to inhibition of adenylate cyclase activity and cAMP formation, and consequently to a decrease in protein kinase A (PKA) activity. Ultimately, activation of these receptors leads to inhibition of neurotransmitter release such as glutamate and GABA via inhibition of Ca2+ channels and activation of K+ channels. Furthermore, while activation of Group 1 mGluRs increases NMDA (N-methyl-D-aspartate) receptor activity and risk of neurotoxicity, Group 2 and 3 mGluRs decrease NMDA receptor activity and prevent neurotoxicity.


Pssm-ID: 320412  Cd Length: 250  Bit Score: 38.77  E-value: 5.40e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 251 TICSVRRFLWGVLFALCFSCLLSQAWRVRRL-----VRHGTGP-----AGWQLVgLALCLMLVQVIIAVEWLVL------ 314
Cdd:cd15285   65 ISCYLQRILPGLSFAMIYAALVTKTNRIARIlagskKKILTRKprfmsASAQVV-ITGILISVEVAIIVVMLILeppdat 143
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755571572 315 ---TVLRDTRPACAYEPMDFVMALIYDMVLLVvtlglalftLCG--KFKRWKL----NGA-FLLITAFLSVLIWVAWMTM 384
Cdd:cd15285  144 ldyPTPKRVRLICNTSTLGFVVPLGFDFLLIL---------LCTlyAFKTRNLpenfNEAkFIGFTMYTTCVIWLAFLPI 214

                 ....*..
gi 755571572 385 YLFGNVK 391
Cdd:cd15285  215 YFGSDNK 221
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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