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Conserved domains on  [gi|528881083|ref|NP_001268667|]
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electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial isoform 3 [Homo sapiens]

Protein Classification

electron transfer flavoprotein-ubiquinone oxidoreductase( domain architecture ID 11428947)

electron transfer flavoprotein-ubiquinone oxidoreductase accepts electrons from ETF and reduces ubiquinone

EC:  1.5.5.1
Gene Ontology:  GO:0004174|GO:0022900|GO:0046872|GO:0051539
PubMed:  17050691|7473063

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ETF_QO pfam05187
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer ...
 451-554 7.82e-75

Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer flavoprotein-ubiquinone oxidoreductase (ETF-QO) in the inner mitochondrial membrane accepts electrons from electron-transfer flavoprotein which is located in the mitochondrial matrix and reduces ubiquinone in the mitochondrial membrane. The two redox centres in the protein, FAD and a [4Fe4S] cluster, are present in a 64-kDa monomer.


:

Pssm-ID: 461576 [Multi-domain]  Cd Length: 104  Bit Score: 232.51  E-value: 7.82e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083  451 GQISFDLLSSVALSGTNHEHDQPAHLTLRDDSIPVNRNLSIYDGPEQRFCPAGVYEFVPVEQGDGFRLQINAQNCVHCKT 530
Cdd:pfam05187   1 GVLTFDRLTSVYLSGTNHEEDQPCHLKLKDPEVPIKVNLPKYAGPEQRYCPAGVYEYVEDEEPGGPRLQINAQNCVHCKT 80

                          90       100
                  ....*....|....*....|....
gi 528881083  531 CDIKDPSQNINWVVPEGGGGPAYN 554
Cdd:pfam05187  81 CDIKDPTQNITWVVPEGGGGPNYP 104
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
15-380 8.86e-58

Dehydrogenase (flavoprotein) [Energy production and conversion];


:

Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 194.42  E-value: 8.86e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083  15 AGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQIGAHTLSGAcLDPGAFKELFPDWKEkgAPLNTPVTEDRFGILTEKYr 94
Cdd:COG0644    1 AGPAGSAAARRLAR------AGLSVLLLEKGSFPGDKICGGG-LLPRALEELEPLGLD--EPLERPVRGARFYSPGGKS- 70

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083  95 ipvpilPGLPMNNHGNYIVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLFHddgsvkgiatndvgiqkDGAPKATFERGL 174
Cdd:COG0644   71 ------VELPPGRGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRD-----------------DGRVVVRTGDGE 127

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083 175 ELHAKVTIFAEGCHGHLAKQLYKKFDLRancEPQTYGIGLKELWVIDE-KNWKPGRVDHTVGwplDRHTYGGSFLYHLNE 253
Cdd:COG0644  128 EIRADYVVDADGARSLLARKLGLKRRSD---EPQDYALAIKEHWELPPlEGVDPGAVEFFFG---EGAPGGYGWVFPLGD 201

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083 254 GEplvalgLVVGldyqnpylspfrefqrwkhhpsirptleggkriaygaraLNEGGFQsiPKLTFPGGLLIGCSPGFMNV 333
Cdd:COG0644  202 GR------VSVG---------------------------------------IPLGGPR--PRLVGDGVLLVGDAAGFVDP 234

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*..
gi 528881083 334 PKIKGTHTAMKSGILAAESIFNQLTSENLQSKTIglhvTEYEDNLKN 380
Cdd:COG0644  235 LTGEGIHLAMKSGRLAAEAIAEALEGGDFSAEAL----AEYERRLRE 277
 
Name Accession Description Interval E-value
ETF_QO pfam05187
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer ...
 451-554 7.82e-75

Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer flavoprotein-ubiquinone oxidoreductase (ETF-QO) in the inner mitochondrial membrane accepts electrons from electron-transfer flavoprotein which is located in the mitochondrial matrix and reduces ubiquinone in the mitochondrial membrane. The two redox centres in the protein, FAD and a [4Fe4S] cluster, are present in a 64-kDa monomer.


Pssm-ID: 461576 [Multi-domain]  Cd Length: 104  Bit Score: 232.51  E-value: 7.82e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083  451 GQISFDLLSSVALSGTNHEHDQPAHLTLRDDSIPVNRNLSIYDGPEQRFCPAGVYEFVPVEQGDGFRLQINAQNCVHCKT 530
Cdd:pfam05187   1 GVLTFDRLTSVYLSGTNHEEDQPCHLKLKDPEVPIKVNLPKYAGPEQRYCPAGVYEYVEDEEPGGPRLQINAQNCVHCKT 80

                          90       100
                  ....*....|....*....|....
gi 528881083  531 CDIKDPSQNINWVVPEGGGGPAYN 554
Cdd:pfam05187  81 CDIKDPTQNITWVVPEGGGGPNYP 104
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
15-380 8.86e-58

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 194.42  E-value: 8.86e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083  15 AGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQIGAHTLSGAcLDPGAFKELFPDWKEkgAPLNTPVTEDRFGILTEKYr 94
Cdd:COG0644    1 AGPAGSAAARRLAR------AGLSVLLLEKGSFPGDKICGGG-LLPRALEELEPLGLD--EPLERPVRGARFYSPGGKS- 70

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083  95 ipvpilPGLPMNNHGNYIVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLFHddgsvkgiatndvgiqkDGAPKATFERGL 174
Cdd:COG0644   71 ------VELPPGRGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRD-----------------DGRVVVRTGDGE 127

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083 175 ELHAKVTIFAEGCHGHLAKQLYKKFDLRancEPQTYGIGLKELWVIDE-KNWKPGRVDHTVGwplDRHTYGGSFLYHLNE 253
Cdd:COG0644  128 EIRADYVVDADGARSLLARKLGLKRRSD---EPQDYALAIKEHWELPPlEGVDPGAVEFFFG---EGAPGGYGWVFPLGD 201

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083 254 GEplvalgLVVGldyqnpylspfrefqrwkhhpsirptleggkriaygaraLNEGGFQsiPKLTFPGGLLIGCSPGFMNV 333
Cdd:COG0644  202 GR------VSVG---------------------------------------IPLGGPR--PRLVGDGVLLVGDAAGFVDP 234

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*..
gi 528881083 334 PKIKGTHTAMKSGILAAESIFNQLTSENLQSKTIglhvTEYEDNLKN 380
Cdd:COG0644  235 LTGEGIHLAMKSGRLAAEAIAEALEGGDFSAEAL----AEYERRLRE 277
FixX COG2440
Ferredoxin-like protein FixX [Energy production and conversion];
461-556 1.09e-42

Ferredoxin-like protein FixX [Energy production and conversion];


Pssm-ID: 441981 [Multi-domain]  Cd Length: 87  Bit Score: 147.27  E-value: 1.09e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083 461 VALSGTNHEHDQPaHLTLRDDSIPVNRNLsiyDGPEQRFCPAGVYEFVpveqGDGfRLQINAQNCVHCKTCDIKDPSQNI 540
Cdd:COG2440    1 LFLNNYNVDEDQP-HIKVKDPDICIARCL---AKPCTRYCPAGVYEIV----GDG-RLQINYENCLECGTCRIKCPTQNI 71

                         90
                 ....*....|....*.
gi 528881083 541 NWVVPEGGGGPAYNGM 556
Cdd:COG2440   72 TWVYPEGGGGVNYRFG 87
PRK10157 PRK10157
putative oxidoreductase FixC; Provisional
 9-380 7.63e-28

putative oxidoreductase FixC; Provisional


Pssm-ID: 182273 [Multi-domain]  Cd Length: 428  Bit Score: 116.16  E-value: 7.63e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083   9 DVVIVGAGPAGLSAAvrlkqLAVAHEkDIRVCLVEKAAQIGAHTLSGACLDPGAFKELFPDWKEKgAPLNTPVTEDRFGI 88
Cdd:PRK10157   7 DAIIVGAGLAGSVAA-----LVLARE-GAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADS-APVERLITHEKLAF 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083  89 LTEKYRIPVPILPGLPMN-NHGNYIVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLfHDDGSVkgiatndVGIQKDGAPk 167
Cdd:PRK10157  80 MTEKSAMTMDYCNGDETSpSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLV-QRDGKV-------VGVEADGDV- 150

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083 168 atfergleLHAKVTIFAEGCHGHLAKQLykkfDLRANCEPQTYGIGLKELW-----VIDEK---NWKPGRVDHTVGWPLD 239
Cdd:PRK10157 151 --------IEAKTVILADGVNSILAEKL----GMAKRVKPTDVAVGVKELIelpksVIEDRfqlQGNQGAACLFAGSPTD 218

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083 240 rHTYGGSFLYhlnEGEPLVALGLVVGLDY-QNPYLSPFREFQRWKHHPSIRPTLEGGKRIAYGARALNEGGFQSIPKLTF 318
Cdd:PRK10157 219 -GLMGGGFLY---TNENTLSLGLVCGLHHlHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVG 294

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 528881083 319 PGGLLIGCSPGF-MNVP-KIKGTHTAMKSGILAAESIFNQLTSENLQSKTIGlhvtEYEDNLKN 380
Cdd:PRK10157 295 DGVLIAGDAAGMcMNLGfTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLA----EYRQHLES 354
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 9-353 2.88e-11

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 64.65  E-value: 2.88e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083    9 DVVIVGAGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQIGAHTLSGAcLDPGAFKELFPDWKekgAPLNTPVTEDRFGI 88
Cdd:TIGR02032   2 DVVVVGAGPAGASAAYRLAD------KGLRVLLLEKKSFPRYKPCGGA-LSPRALEELDLPGE---LIVNLVRGARFFSP 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083   89 LTEKYRIPVPILPGlpmnnhgnYIVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLFHDDGSVKGIATndvgiqkdgapka 168
Cdd:TIGR02032  72 NGDSVEIPIETELA--------YVIDRDAFDEQLAERAQEAGAELRLGTRVLDVEIHDDRVVVIVRG------------- 130

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083  169 tfeRGLELHAKVTIFAEGCHGHLAKQLykkfDLRAncEPQTYGIGLKELWVI--DEKNWKPGRVDhtvgwpLDRHTYGGS 246
Cdd:TIGR02032 131 ---SEGTVTAKIVIGADGSRSIVAKKL----GLKK--EPREYGVAARAEVEMpdEEVDEDFVEVY------IDRGIVPGG 195

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083  247 FLYHLNEGEPLVALGLVVGLDYQnpYLSPFREFQRW-KHHPSIR--PTLE---GGKRIAYGARALNEGGFqsipkltfpg 320
Cdd:TIGR02032 196 YGWVFPKGDGTANVGVGSRSAEE--GEDPKKYLKDFlARRPELKdaETVEvcgALIPIGRPDEKLVRGNV---------- 263

                         330       340       350
                  ....*....|....*....|....*....|...
gi 528881083  321 gLLIGCSPGFMNVPKIKGTHTAMKSGILAAESI 353
Cdd:TIGR02032 264 -LLVGDAAGHVNPLTGEGIYYAMRSGDIAAEVV 295
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
 9-195 6.40e-07

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 51.90  E-value: 6.40e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083    9 DVVIVGAGPAGLSAAVRlkqlavAHEKDIRVCLVEKAAQIGAHT-LSGACLD-PG------------AFKELF------- 67
Cdd:pfam00890   1 DVLVIGGGLAGLAAALA------AAEAGLKVAVVEKGQPFGGATaWSSGGIDaLGnppqggidspelHPTDTLkgldela 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083   68 -PDW---------------KEKGAPLNTpvTED------RFGILTEKYRIPVPILPGLPMNNHGNYIVRLGHlvswmgEQ 125
Cdd:pfam00890  75 dHPYveafveaapeavdwlEALGVPFSR--TEDghldlrPLGGLSATWRTPHDAADRRRGLGTGHALLARLL------EG 146

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 528881083  126 AEALGVEVYPGYAAAEVLfHDDGSVKGIAtndVGIQKDGapkatfeRGLELHAKV-TIFAEGCHGHLAKQL 195
Cdd:pfam00890 147 LRKAGVDFQPRTAADDLI-VEDGRVTGAV---VENRRNG-------REVRIRAIAaVLLATGGFGRLAELL 206
 
Name Accession Description Interval E-value
ETF_QO pfam05187
Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer ...
 451-554 7.82e-75

Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S; Electron-transfer flavoprotein-ubiquinone oxidoreductase (ETF-QO) in the inner mitochondrial membrane accepts electrons from electron-transfer flavoprotein which is located in the mitochondrial matrix and reduces ubiquinone in the mitochondrial membrane. The two redox centres in the protein, FAD and a [4Fe4S] cluster, are present in a 64-kDa monomer.


Pssm-ID: 461576 [Multi-domain]  Cd Length: 104  Bit Score: 232.51  E-value: 7.82e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083  451 GQISFDLLSSVALSGTNHEHDQPAHLTLRDDSIPVNRNLSIYDGPEQRFCPAGVYEFVPVEQGDGFRLQINAQNCVHCKT 530
Cdd:pfam05187   1 GVLTFDRLTSVYLSGTNHEEDQPCHLKLKDPEVPIKVNLPKYAGPEQRYCPAGVYEYVEDEEPGGPRLQINAQNCVHCKT 80

                          90       100
                  ....*....|....*....|....
gi 528881083  531 CDIKDPSQNINWVVPEGGGGPAYN 554
Cdd:pfam05187  81 CDIKDPTQNITWVVPEGGGGPNYP 104
FixC COG0644
Dehydrogenase (flavoprotein) [Energy production and conversion];
15-380 8.86e-58

Dehydrogenase (flavoprotein) [Energy production and conversion];


Pssm-ID: 440409 [Multi-domain]  Cd Length: 281  Bit Score: 194.42  E-value: 8.86e-58
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083  15 AGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQIGAHTLSGAcLDPGAFKELFPDWKEkgAPLNTPVTEDRFGILTEKYr 94
Cdd:COG0644    1 AGPAGSAAARRLAR------AGLSVLLLEKGSFPGDKICGGG-LLPRALEELEPLGLD--EPLERPVRGARFYSPGGKS- 70

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083  95 ipvpilPGLPMNNHGNYIVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLFHddgsvkgiatndvgiqkDGAPKATFERGL 174
Cdd:COG0644   71 ------VELPPGRGGGYVVDRARFDRWLAEQAEEAGAEVRTGTRVTDVLRD-----------------DGRVVVRTGDGE 127

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083 175 ELHAKVTIFAEGCHGHLAKQLYKKFDLRancEPQTYGIGLKELWVIDE-KNWKPGRVDHTVGwplDRHTYGGSFLYHLNE 253
Cdd:COG0644  128 EIRADYVVDADGARSLLARKLGLKRRSD---EPQDYALAIKEHWELPPlEGVDPGAVEFFFG---EGAPGGYGWVFPLGD 201

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083 254 GEplvalgLVVGldyqnpylspfrefqrwkhhpsirptleggkriaygaraLNEGGFQsiPKLTFPGGLLIGCSPGFMNV 333
Cdd:COG0644  202 GR------VSVG---------------------------------------IPLGGPR--PRLVGDGVLLVGDAAGFVDP 234

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*..
gi 528881083 334 PKIKGTHTAMKSGILAAESIFNQLTSENLQSKTIglhvTEYEDNLKN 380
Cdd:COG0644  235 LTGEGIHLAMKSGRLAAEAIAEALEGGDFSAEAL----AEYERRLRE 277
FixX COG2440
Ferredoxin-like protein FixX [Energy production and conversion];
461-556 1.09e-42

Ferredoxin-like protein FixX [Energy production and conversion];


Pssm-ID: 441981 [Multi-domain]  Cd Length: 87  Bit Score: 147.27  E-value: 1.09e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083 461 VALSGTNHEHDQPaHLTLRDDSIPVNRNLsiyDGPEQRFCPAGVYEFVpveqGDGfRLQINAQNCVHCKTCDIKDPSQNI 540
Cdd:COG2440    1 LFLNNYNVDEDQP-HIKVKDPDICIARCL---AKPCTRYCPAGVYEIV----GDG-RLQINYENCLECGTCRIKCPTQNI 71

                         90
                 ....*....|....*.
gi 528881083 541 NWVVPEGGGGPAYNGM 556
Cdd:COG2440   72 TWVYPEGGGGVNYRFG 87
PRK10157 PRK10157
putative oxidoreductase FixC; Provisional
 9-380 7.63e-28

putative oxidoreductase FixC; Provisional


Pssm-ID: 182273 [Multi-domain]  Cd Length: 428  Bit Score: 116.16  E-value: 7.63e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083   9 DVVIVGAGPAGLSAAvrlkqLAVAHEkDIRVCLVEKAAQIGAHTLSGACLDPGAFKELFPDWKEKgAPLNTPVTEDRFGI 88
Cdd:PRK10157   7 DAIIVGAGLAGSVAA-----LVLARE-GAQVLVIERGNSAGAKNVTGGRLYAHSLEHIIPGFADS-APVERLITHEKLAF 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083  89 LTEKYRIPVPILPGLPMN-NHGNYIVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLfHDDGSVkgiatndVGIQKDGAPk 167
Cdd:PRK10157  80 MTEKSAMTMDYCNGDETSpSQRSYSVLRSKFDAWLMEQAEEAGAQLITGIRVDNLV-QRDGKV-------VGVEADGDV- 150

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083 168 atfergleLHAKVTIFAEGCHGHLAKQLykkfDLRANCEPQTYGIGLKELW-----VIDEK---NWKPGRVDHTVGWPLD 239
Cdd:PRK10157 151 --------IEAKTVILADGVNSILAEKL----GMAKRVKPTDVAVGVKELIelpksVIEDRfqlQGNQGAACLFAGSPTD 218

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083 240 rHTYGGSFLYhlnEGEPLVALGLVVGLDY-QNPYLSPFREFQRWKHHPSIRPTLEGGKRIAYGARALNEGGFQSIPKLTF 318
Cdd:PRK10157 219 -GLMGGGFLY---TNENTLSLGLVCGLHHlHDAKKSVPQMLEDFKQHPAVAPLIAGGKLVEYSAHVVPEAGINMLPELVG 294

                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 528881083 319 PGGLLIGCSPGF-MNVP-KIKGTHTAMKSGILAAESIFNQLTSENLQSKTIGlhvtEYEDNLKN 380
Cdd:PRK10157 295 DGVLIAGDAAGMcMNLGfTIRGMDLAIAAGEAAAKTVLSAMKSDDFSKQKLA----EYRQHLES 354
PRK10015 PRK10015
oxidoreductase; Provisional
 6-393 5.73e-27

oxidoreductase; Provisional


Pssm-ID: 182194 [Multi-domain]  Cd Length: 429  Bit Score: 113.53  E-value: 5.73e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083   6 EEADVVIVGAGPAGLSAAVrlkqlaVAHEKDIRVCLVEKAAQIGAHTLSGACLDPGAFKELFPDWKEKgAPLNTPVTEDR 85
Cdd:PRK10015   4 DKFDAIVVGAGVAGSVAAL------VMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAAS-APVERKVTREK 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083  86 FGILTEKYRIPVPI---LPGLPmnNHGNYIVRLGHLVSWMGEQAEALGVEVYPGyAAAEVLFHDDGSVKGI-ATNDVgiq 161
Cdd:PRK10015  77 ISFLTEESAVTLDFhreQPDVP--QHASYTVLRNRLDPWLMEQAEQAGAQFIPG-VRVDALVREGNKVTGVqAGDDI--- 150

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083 162 kdgapkatfergleLHAKVTIFAEGCHGHLAKQLykkfDLRANCEPQTYGIGLKELW-----VIDEK---NWKPGRVDHT 233
Cdd:PRK10015 151 --------------LEANVVILADGVNSMLGRSL----GMVPASDPHHYAVGVKEVIgltpeQINDRfniTGEEGAAWLF 212

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083 234 VGWPLDrHTYGGSFLYhlnEGEPLVALGLVVGL-DYQNPYLSPFREFQRWKHHPSIRPTLEGGKRIAYGARALNEGGFQS 312
Cdd:PRK10015 213 AGSPSD-GLMGGGFLY---TNKDSISLGLVCGLgDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAM 288

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083 313 IPKLTFPGGLLIGCSPGF-MNVP-KIKGTHTAMKSGILAAESIFNQLTSENLQSKTIGlhvtEYEDNLKNSWVWKELYSV 390
Cdd:PRK10015 289 VPQLVNDGVMIVGDAAGFcLNLGfTVRGMDLAIASAQAAATTVIAAKERADFSASSLA----QYKRELEQSCVMRDMQHF 364


                 ...
gi 528881083 391 RNI 393
Cdd:PRK10015 365 RKI 367
SdhA COG1053
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ...
 6-193 1.16e-12

Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle


Pssm-ID: 440673 [Multi-domain]  Cd Length: 443  Bit Score: 69.86  E-value: 1.16e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083   6 EEADVVIVGAGPAGLSAAVRlkqlavAHEKDIRVCLVEKAAQIGAHT-LSGacldpGAF----------------KELFP 68
Cdd:COG1053    2 HEYDVVVVGSGGAGLRAALE------AAEAGLKVLVLEKVPPRGGHTaAAQ-----GGInaagtnvqkaagedspEEHFY 70

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083  69 DWKEKGAPLNTPvteDRFGILTEK---------------YRIPVPILPGLPMNNHGNYI---VRLGH-LVSWMGEQAEAL 129
Cdd:COG1053   71 DTVKGGDGLADQ---DLVEALAEEapeaidwleaqgvpfSRTPDGRLPQFGGHSVGRTCyagDGTGHaLLATLYQAALRL 147

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 528881083 130 GVEVYPGYAAAEvLFHDDGSVKGIatndVGIQKDGAPKAtfergleLHAKVTIFAEGCHGHLAK 193
Cdd:COG1053  148 GVEIFTETEVLD-LIVDDGRVVGV----VARDRTGEIVR-------IRAKAVVLATGGFGRNYE 199
UbiH COG0654
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ...
 5-195 2.65e-12

2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis


Pssm-ID: 440419 [Multi-domain]  Cd Length: 326  Bit Score: 68.04  E-value: 2.65e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083   5 AEEADVVIVGAGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQIG----AHTLSGACLDpgAFKEL--FPDWKEKGAPLN 78
Cdd:COG0654    1 MMRTDVLIVGGGPAGLALALALAR------AGIRVTVVERAPPPRpdgrGIALSPRSLE--LLRRLglWDRLLARGAPIR 72

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083  79 T-PVTEDRFGilTEKYRIPVPILPGLPMnnhgnYIVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLFHDDGsvkgiatnd 157
Cdd:COG0654   73 GiRVRDGSDG--RVLARFDAAETGLPAG-----LVVPRADLERALLEAARALGVELRFGTEVTGLEQDADG--------- 136

                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 528881083 158 vgiqkdgaPKATFERGLELHAKVTIFAEGCHGHLAKQL 195
Cdd:COG0654  137 --------VTVTLADGRTLRADLVVGADGARSAVRRLL 166
GG-red-SF TIGR02032
geranylgeranyl reductase family; This model represents a subfamily which includes ...
 9-353 2.88e-11

geranylgeranyl reductase family; This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates. [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]


Pssm-ID: 273936 [Multi-domain]  Cd Length: 295  Bit Score: 64.65  E-value: 2.88e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083    9 DVVIVGAGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQIGAHTLSGAcLDPGAFKELFPDWKekgAPLNTPVTEDRFGI 88
Cdd:TIGR02032   2 DVVVVGAGPAGASAAYRLAD------KGLRVLLLEKKSFPRYKPCGGA-LSPRALEELDLPGE---LIVNLVRGARFFSP 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083   89 LTEKYRIPVPILPGlpmnnhgnYIVRLGHLVSWMGEQAEALGVEVYPGYAAAEVLFHDDGSVKGIATndvgiqkdgapka 168
Cdd:TIGR02032  72 NGDSVEIPIETELA--------YVIDRDAFDEQLAERAQEAGAELRLGTRVLDVEIHDDRVVVIVRG------------- 130

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083  169 tfeRGLELHAKVTIFAEGCHGHLAKQLykkfDLRAncEPQTYGIGLKELWVI--DEKNWKPGRVDhtvgwpLDRHTYGGS 246
Cdd:TIGR02032 131 ---SEGTVTAKIVIGADGSRSIVAKKL----GLKK--EPREYGVAARAEVEMpdEEVDEDFVEVY------IDRGIVPGG 195

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083  247 FLYHLNEGEPLVALGLVVGLDYQnpYLSPFREFQRW-KHHPSIR--PTLE---GGKRIAYGARALNEGGFqsipkltfpg 320
Cdd:TIGR02032 196 YGWVFPKGDGTANVGVGSRSAEE--GEDPKKYLKDFlARRPELKdaETVEvcgALIPIGRPDEKLVRGNV---------- 263

                         330       340       350
                  ....*....|....*....|....*....|...
gi 528881083  321 gLLIGCSPGFMNVPKIKGTHTAMKSGILAAESI 353
Cdd:TIGR02032 264 -LLVGDAAGHVNPLTGEGIYYAMRSGDIAAEVV 295
COG1233 COG1233
Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and ...
 9-62 5.33e-07

Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440846 [Multi-domain]  Cd Length: 491  Bit Score: 52.16  E-value: 5.33e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 528881083   9 DVVIVGAGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQIG--AHTLS--GACLDPGA 62
Cdd:COG1233    5 DVVVIGAGIGGLAAAALLAR------AGYRVTVLEKNDTPGgrARTFErpGFRFDVGP 56
HemY COG1232
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ...
 9-62 5.49e-07

Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis


Pssm-ID: 440845 [Multi-domain]  Cd Length: 443  Bit Score: 52.14  E-value: 5.49e-07
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 528881083   9 DVVIVGAGPAGLSAAVRLKQLavahekDIRVCLVEKAAQIG----AHTLSGACLDPGA 62
Cdd:COG1232    3 RVAVIGGGIAGLTAAYRLAKA------GHEVTVLEASDRVGglirTVEVDGFRIDRGP 54
FAD_binding_2 pfam00890
FAD binding domain; This family includes members that bind FAD. This family includes the ...
 9-195 6.40e-07

FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.


Pssm-ID: 395718 [Multi-domain]  Cd Length: 398  Bit Score: 51.90  E-value: 6.40e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083    9 DVVIVGAGPAGLSAAVRlkqlavAHEKDIRVCLVEKAAQIGAHT-LSGACLD-PG------------AFKELF------- 67
Cdd:pfam00890   1 DVLVIGGGLAGLAAALA------AAEAGLKVAVVEKGQPFGGATaWSSGGIDaLGnppqggidspelHPTDTLkgldela 74

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083   68 -PDW---------------KEKGAPLNTpvTED------RFGILTEKYRIPVPILPGLPMNNHGNYIVRLGHlvswmgEQ 125
Cdd:pfam00890  75 dHPYveafveaapeavdwlEALGVPFSR--TEDghldlrPLGGLSATWRTPHDAADRRRGLGTGHALLARLL------EG 146

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 528881083  126 AEALGVEVYPGYAAAEVLfHDDGSVKGIAtndVGIQKDGapkatfeRGLELHAKV-TIFAEGCHGHLAKQL 195
Cdd:pfam00890 147 LRKAGVDFQPRTAADDLI-VEDGRVTGAV---VENRRNG-------REVRIRAIAaVLLATGGFGRLAELL 206
Thi4 pfam01946
Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.
 7-156 8.54e-07

Thi4 family; This family includes Swiss:P32318 a putative thiamine biosynthetic enzyme.


Pssm-ID: 460393  Cd Length: 232  Bit Score: 50.16  E-value: 8.54e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083    7 EADVVIVGAGPAGLSAAVRLkqlavAHEKDIRVCLVEKAAQIGAHTLSGACLDPGAFKElfpdwKEKGAPLntpvteDRF 86
Cdd:pfam01946  17 ESDVVIVGAGSSGLTAAYYL-----AKNRGLKVAIIERSVSPGGGAWLGGQLFSAMVVR-----KPAHLFL------DEF 80

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 528881083   87 GIltekyripvpilpglPMNNHGNYIVrLGHLVSWMGEQAEAL----GVEVYPGYAAAEVLFHDDGSVKGIATN 156
Cdd:pfam01946  81 GI---------------PYEDEGDYVV-VKHAALFTSTLMSKAlqlpNVKLFNATSVEDLIVRPGVGVAGVVTN 138
FAD_binding_3 pfam01494
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
 7-195 1.02e-06

FAD binding domain; This domain is involved in FAD binding in a number of enzymes.


Pssm-ID: 396193 [Multi-domain]  Cd Length: 348  Bit Score: 50.79  E-value: 1.02e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083    7 EADVVIVGAGPAGLSAAVRLkqlavaHEKDIRVCLVEKAAqiGAHTLSGAC-LDPGAFkELFPD------WKEKGAPlnt 79
Cdd:pfam01494   1 ETDVLIVGGGPAGLMLALLL------ARAGVRVVLVERHA--TTSVLPRAHgLNQRTM-ELLRQagledrILAEGVP--- 68

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083   80 pvtEDRFGILTEKYRIPV---PILPGLPMNNHG-NYIVRLghlvswMGEQAEALGVEVYPGyaaAEVLF--HDDGSVKGI 153
Cdd:pfam01494  69 ---HEGMGLAFYNTRRRAdldFLTSPPRVTVYPqTELEPI------LVEHAEARGAQVRFG---TEVLSleQDGDGVTAV 136

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 528881083  154 ATNdvgiQKDGApkatferGLELHAKVTIFAEGCHGHLAKQL 195
Cdd:pfam01494 137 VRD----RRDGE-------EYTVRAKYLVGCDGGRSPVRKTL 167
CzcO COG2072
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ...
 5-59 1.27e-06

Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];


Pssm-ID: 441675 [Multi-domain]  Cd Length: 414  Bit Score: 51.02  E-value: 1.27e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 528881083   5 AEEADVVIVGAGPAGLSAAVRLKQLavahekDIRVCLVEKAAQIG----AHTLSGACLD 59
Cdd:COG2072    4 TEHVDVVVIGAGQAGLAAAYHLRRA------GIDFVVLEKADDVGgtwrDNRYPGLRLD 56
LhgO COG0579
L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];
6-56 2.19e-06

L-2-hydroxyglutarate oxidase LhgO [Carbohydrate transport and metabolism];


Pssm-ID: 440344 [Multi-domain]  Cd Length: 418  Bit Score: 50.14  E-value: 2.19e-06
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|.
gi 528881083   6 EEADVVIVGAGPAGLSAAVRLKQLavaheKDIRVCLVEKAAQIGAHTlSGA 56
Cdd:COG0579    3 EMYDVVIIGAGIVGLALARELSRY-----EDLKVLVLEKEDDVAQES-SGN 47
COG3380 COG3380
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
9-74 3.29e-06

Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];


Pssm-ID: 442607 [Multi-domain]  Cd Length: 331  Bit Score: 49.11  E-value: 3.29e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 528881083   9 DVVIVGAGPAGLSAAVRLkqlavaHEKDIRVCLVEKAAQIG----AHTLSGACLDPGA---------FKELFPDWKEKG 74
Cdd:COG3380    5 DIAIIGAGIAGLAAARAL------QDAGHEVTVFEKSRGVGgrmaTRRLDGGRFDHGAqyftardprFQALVEEWLAAG 77
YobN COG1231
Monoamine oxidase [Amino acid transport and metabolism];
1-62 3.42e-06

Monoamine oxidase [Amino acid transport and metabolism];


Pssm-ID: 440844 [Multi-domain]  Cd Length: 440  Bit Score: 49.53  E-value: 3.42e-06
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 528881083   1 MERFAEEADVVIVGAGPAGLSAAVRLKQLAVahekdiRVCLVEKAAQIG--AHTLSGAC----LDPGA 62
Cdd:COG1231    1 MSRRARGKDVVIVGAGLAGLAAARELRKAGL------DVTVLEARDRVGgrVWTLRFGDdglyAELGA 62
Lpd COG1249
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ...
 5-151 4.45e-06

Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation


Pssm-ID: 440861 [Multi-domain]  Cd Length: 456  Bit Score: 49.31  E-value: 4.45e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083   5 AEEADVVIVGAGPAGLSAAVRLKQLavahekDIRVCLVEKaaqigaHTLSGACL-----------DPGAFKELFPDWKEk 73
Cdd:COG1249    1 MKDYDLVVIGAGPGGYVAAIRAAQL------GLKVALVEK------GRLGGTCLnvgcipskallHAAEVAHEARHAAE- 67

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 528881083  74 gaplntpvtedrFGILTEKYRIPVPilpglPMNNHGNYIVrlGHLVSWMGEQAEALGVEVYPGYAAaevlFHDDGSVK 151
Cdd:COG1249   68 ------------FGISAGAPSVDWA-----ALMARKDKVV--DRLRGGVEELLKKNGVDVIRGRAR----FVDPHTVE 122
DadA COG0665
Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];
6-207 6.51e-06

Glycine/D-amino acid oxidase (deaminating) [Amino acid transport and metabolism];


Pssm-ID: 440429 [Multi-domain]  Cd Length: 364  Bit Score: 48.36  E-value: 6.51e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083   6 EEADVVIVGAGPAGLSAAVRLkqlavaHEKDIRVCLVEkAAQIGAHTlSGAC-------LDPGAFKELFP---------- 68
Cdd:COG0665    1 ATADVVVIGGGIAGLSTAYHL------ARRGLDVTVLE-RGRPGSGA-SGRNagqlrpgLAALADRALVRlarealdlwr 72

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083  69 ----------DWKEKGApLNTPVTEDRFGILTEKYR------IPVPIL---------PGLPMNN--HGNYIVRLGH---- 117
Cdd:COG0665   73 elaaelgidcDFRRTGV-LYLARTEAELAALRAEAEalralgLPVELLdaaelrerePGLGSPDyaGGLYDPDDGHvdpa 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083 118 -LVSWMGEQAEALGVEVYPGYAAAEVLfHDDGSVKGIATndvgiqkdgapkatfERGlELHAKVTIFAEGCHghlAKQLY 196
Cdd:COG0665  152 kLVRALARAARAAGVRIREGTPVTGLE-REGGRVTGVRT---------------ERG-TVRADAVVLAAGAW---SARLL 211

                        250
                 ....*....|.
gi 528881083 197 KKFDLRANCEP 207
Cdd:COG0665  212 PMLGLRLPLRP 222
YdhS COG4529
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
9-86 1.25e-05

Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];


Pssm-ID: 443597 [Multi-domain]  Cd Length: 466  Bit Score: 48.03  E-value: 1.25e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083   9 DVVIVGAGPAGLSAAVrlkQLAVAHEKDIRVCLVEKAAQIGA----HTLSGACL-------------DPGAFKelfpDW- 70
Cdd:COG4529    7 RIAIIGGGASGTALAI---HLLRRAPEPLRITLFEPRPELGRgvaySTDSPEHLlnvpagrmsafpdDPDHFL----RWl 79

                         90
                 ....*....|....*.
gi 528881083  71 KEKGAPLNTPVTEDRF 86
Cdd:COG4529   80 RENGARAAPAIDPDAF 95
DAO pfam01266
FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: ...
 9-148 1.36e-05

FAD dependent oxidoreductase; This family includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase EC:1.1.99.5, Sarcosine oxidase beta subunit EC:1.5.3.1, D-alanine oxidase EC:1.4.99.1, D-aspartate oxidase EC:1.4.3.1.


Pssm-ID: 426168 [Multi-domain]  Cd Length: 339  Bit Score: 47.39  E-value: 1.36e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083    9 DVVIVGAGPAGLSAAVRLKqlavahEKDIRVCLVEKAAQIGAHTlSGA----------CLDPGAFKELF----------- 67
Cdd:pfam01266   1 DVVVIGGGIVGLSTAYELA------RRGLSVTLLERGDDPGSGA-SGRnaglihpglrYLEPSELARLAlealdlweele 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083   68 ------PDWKEKGA-PLNTPVTEDRFGILTE---KYRIPVPIL---------PGLPMNNHGNYIVRLGH-----LVSWMG 123
Cdd:pfam01266  74 eelgidCGFRRCGVlVLARDEEEEALEKLLAalrRLGVPAELLdaeelrelePLLPGLRGGLFYPDGGHvdparLLRALA 153

                         170       180
                  ....*....|....*....|....*
gi 528881083  124 EQAEALGVEVYPGYAAAEVLFHDDG 148
Cdd:pfam01266 154 RAAEALGVRIIEGTEVTGIEEEGGV 178
mhpA PRK06183
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
5-48 4.38e-05

bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;


Pssm-ID: 235727 [Multi-domain]  Cd Length: 500  Bit Score: 46.05  E-value: 4.38e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 528881083   5 AEEADVVIVGAGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQI 48
Cdd:PRK06183   8 AHDTDVVIVGAGPVGLTLANLLGQ------YGVRVLVLERWPTL 45
Pyr_redox_2 pfam07992
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ...
 9-88 4.88e-05

Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.


Pssm-ID: 400379 [Multi-domain]  Cd Length: 301  Bit Score: 45.39  E-value: 4.88e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083    9 DVVIVGAGPAGLSAAVRLKQlavaHEKDIRVCLVEKAAQIGAHTLSGACLDPGAFKELFPDWKEKGAPLNTPVTEDRFGI 88
Cdd:pfam07992   2 DVVVIGGGPAGLAAALTLAQ----LGGKVTLIEDEGTCPYGGCVLSKALLGAAEAPEIASLWADLYKRKEEVVKKLNNGI 77
TrxB COG0492
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
9-188 5.02e-05

Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 440258 [Multi-domain]  Cd Length: 305  Bit Score: 45.50  E-value: 5.02e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083   9 DVVIVGAGPAGLSAAVrlkqlaVAHEKDIRVCLVEKAAqigahtlsgacldPGafkelfpdwkekGAPLNTPVTEDRFGi 88
Cdd:COG0492    2 DVVIIGAGPAGLTAAI------YAARAGLKTLVIEGGE-------------PG------------GQLATTKEIENYPG- 49

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083  89 ltekyrIPVPIL-PGLpMNNhgnyivrlghlvswMGEQAEALGVEVYPGyaaaEVlfhddgsvkgiatndVGIQKDGAPK 167
Cdd:COG0492   50 ------FPEGISgPEL-AER--------------LREQAERFGAEILLE----EV---------------TSVDKDDGPF 89

                        170       180
                 ....*....|....*....|..
gi 528881083 168 -ATFERGLELHAKVTIFAEGCH 188
Cdd:COG0492   90 rVTTDDGTEYEAKAVIIATGAG 111
NAD_binding_8 pfam13450
NAD(P)-binding Rossmann-like domain;
12-54 7.00e-05

NAD(P)-binding Rossmann-like domain;


Pssm-ID: 433218 [Multi-domain]  Cd Length: 67  Bit Score: 40.98  E-value: 7.00e-05
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|...
gi 528881083   12 IVGAGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQIGAHTLS 54
Cdd:pfam13450   1 IVGAGLAGLVAAALLAK------RGFRVLVLEKRDRLGGNAYS 37
PRK06292 PRK06292
dihydrolipoamide dehydrogenase; Validated
 6-58 7.62e-05

dihydrolipoamide dehydrogenase; Validated


Pssm-ID: 235774 [Multi-domain]  Cd Length: 460  Bit Score: 45.17  E-value: 7.62e-05
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 528881083   6 EEADVVIVGAGPAGLSAAVRLKQlavaHEKdiRVCLVEKAaqigahTLSGACL 58
Cdd:PRK06292   2 EKYDVIVIGAGPAGYVAARRAAK----LGK--KVALIEKG------PLGGTCL 42
PRK08294 PRK08294
phenol 2-monooxygenase; Provisional
 6-44 8.78e-05

phenol 2-monooxygenase; Provisional


Pssm-ID: 236223 [Multi-domain]  Cd Length: 634  Bit Score: 45.36  E-value: 8.78e-05
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 528881083   6 EEADVVIVGAGPAGLSAAVRLKQLAvahekDIRVCLVEK 44
Cdd:PRK08294  31 DEVDVLIVGCGPAGLTLAAQLSAFP-----DITTRIVER 64
PRK06416 PRK06416
dihydrolipoamide dehydrogenase; Reviewed
 4-58 1.28e-04

dihydrolipoamide dehydrogenase; Reviewed


Pssm-ID: 235798 [Multi-domain]  Cd Length: 462  Bit Score: 44.75  E-value: 1.28e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 528881083   4 FAEEADVVIVGAGPAGLSAAVRLKQLavahekDIRVCLVEKAaqigahTLSGACL 58
Cdd:PRK06416   1 FAFEYDVIVIGAGPGGYVAAIRAAQL------GLKVAIVEKE------KLGGTCL 43
PRK07843 PRK07843
3-oxosteroid 1-dehydrogenase;
5-56 1.53e-04

3-oxosteroid 1-dehydrogenase;


Pssm-ID: 236111 [Multi-domain]  Cd Length: 557  Bit Score: 44.64  E-value: 1.53e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 528881083   5 AEEADVVIVGAGPAGLSAAvrlkqLAVAHeKDIRVCLVEKAAQIGAHTL-SGA 56
Cdd:PRK07843   5 VQEYDVVVVGSGAAGMVAA-----LTAAH-RGLSTVVVEKAPHYGGSTArSGG 51
COG3349 COG3349
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ...
 9-49 1.94e-04

Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];


Pssm-ID: 442577 [Multi-domain]  Cd Length: 445  Bit Score: 44.07  E-value: 1.94e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 528881083   9 DVVIVGAGPAGLSAAVRLKqlavahEKDIRVCLVEKAAQIG 49
Cdd:COG3349    5 RVVVVGGGLAGLAAAVELA------EAGFRVTLLEARPRLG 39
COG2509 COG2509
FAD-dependent dehydrogenase [General function prediction only];
9-44 2.01e-04

FAD-dependent dehydrogenase [General function prediction only];


Pssm-ID: 441999 [Multi-domain]  Cd Length: 466  Bit Score: 43.95  E-value: 2.01e-04
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 528881083   9 DVVIVGAGPAGLSAAVRLKqlavahEKDIRVCLVEK 44
Cdd:COG2509   32 DVVIVGAGPAGLFAALELA------EAGLKPLVLER 61
Lycopene_cycl pfam05834
Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. ...
 9-43 3.77e-04

Lycopene cyclase protein; This family consists of lycopene beta and epsilon cyclase proteins. Carotenoids with cyclic end groups are essential components of the photosynthetic membranes in all plants, algae, and cyanobacteria. These lipid-soluble compounds protect against photo-oxidation, harvest light for photosynthesis, and dissipate excess light energy absorbed by the antenna pigments. The cyclization of lycopene (psi, psi-carotene) is a key branch point in the pathway of carotenoid biosynthesis. Two types of cyclic end groups are found in higher plant carotenoids: the beta and epsilon rings. Carotenoids with two beta rings are ubiquitous, and those with one beta and one epsilon ring are common; however, carotenoids with two epsilon rings are rare.


Pssm-ID: 310433 [Multi-domain]  Cd Length: 380  Bit Score: 42.79  E-value: 3.77e-04
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 528881083    9 DVVIVGAGPAGLSAAVRLkqlaVAHEKDIRVCLVE 43
Cdd:pfam05834   1 DVVIIGAGPAGLSLAARL----AAAKPGLSVVLIE 31
YhiN COG2081
Predicted flavoprotein YhiN [General function prediction only];
11-49 5.11e-04

Predicted flavoprotein YhiN [General function prediction only];


Pssm-ID: 441684 [Multi-domain]  Cd Length: 402  Bit Score: 42.73  E-value: 5.11e-04
                         10        20        30
                 ....*....|....*....|....*....|....*....
gi 528881083  11 VIVGAGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQIG 49
Cdd:COG2081    1 IVIGAGAAGLMAAITAAE------RGARVLLLEKNPKVG 33
PRK06134 PRK06134
putative FAD-binding dehydrogenase; Reviewed
 4-55 5.64e-04

putative FAD-binding dehydrogenase; Reviewed


Pssm-ID: 180419 [Multi-domain]  Cd Length: 581  Bit Score: 42.79  E-value: 5.64e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 528881083   4 FAEEADVVIVGAGPAGLSAAVrlkqlaVAHEKDIRVCLVEKAAQIGAHT-LSG 55
Cdd:PRK06134   9 PDLECDVLVIGSGAAGLSAAV------TAAWHGLKVIVVEKDPVFGGTTaWSG 55
HI0933_like pfam03486
HI0933-like protein;
9-49 5.67e-04

HI0933-like protein;


Pssm-ID: 427330 [Multi-domain]  Cd Length: 406  Bit Score: 42.57  E-value: 5.67e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 528881083    9 DVVIVGAGPAGLSAAvrlkqlAVAHEKDIRVCLVEKAAQIG 49
Cdd:pfam03486   2 DVIVIGGGAAGLMAA------ISAAKRGRRVLLIEKGKKLG 36
HdrA COG1148
Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];
9-51 5.91e-04

Heterodisulfide reductase, subunit A (polyferredoxin) [Energy production and conversion];


Pssm-ID: 440762 [Multi-domain]  Cd Length: 563  Bit Score: 42.54  E-value: 5.91e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 528881083   9 DVVIVGAGPAGLSAAvrlkqLAVAhEKDIRVCLVEKAAQIGAH 51
Cdd:COG1148  142 RALVIGGGIAGMTAA-----LELA-EQGYEVYLVEKEPELGGR 178
PRK06854 PRK06854
adenylyl-sulfate reductase subunit alpha;
7-46 6.40e-04

adenylyl-sulfate reductase subunit alpha;


Pssm-ID: 235879 [Multi-domain]  Cd Length: 608  Bit Score: 42.60  E-value: 6.40e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 528881083   7 EADVVIVGAGPAGLSAAVRLKQLAvaheKDIRVCLVEKAA 46
Cdd:PRK06854  11 DTDILIIGGGMAGCGAAFEAKEWA----PDLKVLIVEKAN 46
PRK11883 PRK11883
protoporphyrinogen oxidase; Reviewed
 10-49 8.99e-04

protoporphyrinogen oxidase; Reviewed


Pssm-ID: 237009 [Multi-domain]  Cd Length: 451  Bit Score: 41.76  E-value: 8.99e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 528881083  10 VVIVGAGPAGLSAAVRLKQLavahEKDIRVCLVEKAAQIG 49
Cdd:PRK11883   3 VAIIGGGITGLSAAYRLHKK----GPDADITLLEASDRLG 38
PRK09126 PRK09126
FAD-dependent hydroxylase;
9-46 9.42e-04

FAD-dependent hydroxylase;


Pssm-ID: 236385 [Multi-domain]  Cd Length: 392  Bit Score: 41.85  E-value: 9.42e-04
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 528881083   9 DVVIVGAGPAGLSAAVRLKQLavahekDIRVCLVEKAA 46
Cdd:PRK09126   5 DIVVVGAGPAGLSFARSLAGS------GLKVTLIERQP 36
PRK07804 PRK07804
L-aspartate oxidase; Provisional
 6-47 9.95e-04

L-aspartate oxidase; Provisional


Pssm-ID: 236102 [Multi-domain]  Cd Length: 541  Bit Score: 41.88  E-value: 9.95e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 528881083   6 EEADVVIVGAGPAGLSAAVRlkqlavAHEKDIRVCLVEKAAQ 47
Cdd:PRK07804  15 DAADVVVVGSGVAGLTAALA------ARRAGRRVLVVTKAAL 50
PRK12842 PRK12842
putative succinate dehydrogenase; Reviewed
 7-58 1.03e-03

putative succinate dehydrogenase; Reviewed


Pssm-ID: 237224 [Multi-domain]  Cd Length: 574  Bit Score: 41.99  E-value: 1.03e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 528881083   7 EADVVIVGAGPAGLSAAVrlkqlaVAHEKDIRVCLVEKAAQIGAHT-LSGACL 58
Cdd:PRK12842   9 TCDVLVIGSGAGGLSAAI------TARKLGLDVVVLEKEPVFGGTTaFSGGVL 55
sdhA PRK06069
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
1-54 1.16e-03

succinate dehydrogenase/fumarate reductase flavoprotein subunit;


Pssm-ID: 235689 [Multi-domain]  Cd Length: 577  Bit Score: 41.58  E-value: 1.16e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 528881083   1 MERFaeEADVVIVGAGPAGLSAAVrlkQLAVAHEKDIRVCLVEKAAQIGAHTLS 54
Cdd:PRK06069   1 MEVL--KYDVVIVGSGLAGLRAAV---AAAERSGGKLSVAVVSKTQPMRSHSVS 49
PRK07233 PRK07233
hypothetical protein; Provisional
 10-49 1.58e-03

hypothetical protein; Provisional


Pssm-ID: 235977 [Multi-domain]  Cd Length: 434  Bit Score: 41.03  E-value: 1.58e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 528881083  10 VVIVGAGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQIG 49
Cdd:PRK07233   2 IAIVGGGIAGLAAAYRLAK------RGHEVTVFEADDQLG 35
BetA COG2303
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General ...
 6-43 1.88e-03

Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only]; Choline dehydrogenase or related flavoprotein is part of the Pathway/BioSystem: Non-phosphorylated Entner-Doudoroff pathway


Pssm-ID: 441878 [Multi-domain]  Cd Length: 531  Bit Score: 40.97  E-value: 1.88e-03
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 528881083   6 EEADVVIVGAGPAGLSAAVRLkqlavAHEKDIRVCLVE 43
Cdd:COG2303    3 EEYDYVIVGAGSAGCVLANRL-----SEDAGLRVLLLE 35
PRK06847 PRK06847
hypothetical protein; Provisional
 9-148 1.95e-03

hypothetical protein; Provisional


Pssm-ID: 235874 [Multi-domain]  Cd Length: 375  Bit Score: 40.63  E-value: 1.95e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083   9 DVVIVGAGPAGLSAAVRLKQLAVAhekdirVCLVEKA---AQIGAH-TLSGACLDpgAFKEL--FPDWKEKGAPLNTPVT 82
Cdd:PRK06847   6 KVLIVGGGIGGLSAAIALRRAGIA------VDLVEIDpewRVYGAGiTLQGNALR--ALRELgvLDECLEAGFGFDGVDL 77

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528881083  83 EDRFGILTekYRIPVPIL--PGLPMNNHgnyIVR--LGHLvswMGEQAEALGVEVYPGYAAAEVLFHDDG 148
Cdd:PRK06847  78 FDPDGTLL--AELPTPRLagDDLPGGGG---IMRpaLARI---LADAARAAGADVRLGTTVTAIEQDDDG 139
PRK07208 PRK07208
hypothetical protein; Provisional
 9-49 2.03e-03

hypothetical protein; Provisional


Pssm-ID: 235967 [Multi-domain]  Cd Length: 479  Bit Score: 40.64  E-value: 2.03e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 528881083   9 DVVIVGAGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQIG 49
Cdd:PRK07208   6 SVVIIGAGPAGLTAAYELLK------RGYPVTVLEADPVVG 40
gltD PRK12810
glutamate synthase subunit beta; Reviewed
 10-49 2.35e-03

glutamate synthase subunit beta; Reviewed


Pssm-ID: 237213 [Multi-domain]  Cd Length: 471  Bit Score: 40.53  E-value: 2.35e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 528881083  10 VVIVGAGPAGLSAAvrlKQLAVA-HEkdirVCLVEKAAQIG 49
Cdd:PRK12810 146 VAVVGSGPAGLAAA---DQLARAgHK----VTVFERADRIG 179
PRK12843 PRK12843
FAD-dependent oxidoreductase;
2-56 2.50e-03

FAD-dependent oxidoreductase;


Pssm-ID: 237225 [Multi-domain]  Cd Length: 578  Bit Score: 40.49  E-value: 2.50e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 528881083   2 ERFAEEADVVIVGAGPAGLSAAVrlkqlaVAHEKDIRVCLVEKAAQIGAHT-LSGA 56
Cdd:PRK12843  11 ERWDAEFDVIVIGAGAAGMSAAL------FAAIAGLKVLLVERTEYVGGTTaTSAG 60
NadB COG0029
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ...
 6-46 2.53e-03

Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis


Pssm-ID: 439800 [Multi-domain]  Cd Length: 521  Bit Score: 40.48  E-value: 2.53e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|.
gi 528881083   6 EEADVVIVGAGPAGLSAAVRLKQLAvahekdiRVCLVEKAA 46
Cdd:COG0029    3 LKTDVLVIGSGIAGLSAALKLAERG-------RVTLLTKGE 36
PRK06370 PRK06370
FAD-containing oxidoreductase;
1-61 2.97e-03

FAD-containing oxidoreductase;


Pssm-ID: 235787 [Multi-domain]  Cd Length: 463  Bit Score: 40.19  E-value: 2.97e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 528881083   1 MERFaeeaDVVIVGAGPAGLSAAVRLKQLAvahekdIRVCLVEKaaqigaHTLSGACLDPG 61
Cdd:PRK06370   3 AQRY----DAIVIGAGQAGPPLAARAAGLG------MKVALIER------GLLGGTCVNTG 47
PRK05329 PRK05329
glycerol-3-phosphate dehydrogenase subunit GlpB;
7-59 3.48e-03

glycerol-3-phosphate dehydrogenase subunit GlpB;


Pssm-ID: 235412  Cd Length: 422  Bit Score: 39.83  E-value: 3.48e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|...
gi 528881083   7 EADVVIVGAGPAGLSAAVRLKqlavahEKDIRVCLVEKAaqIGAHTLSGACLD 59
Cdd:PRK05329   2 KFDVLVIGGGLAGLTAALAAA------EAGKRVALVAKG--QGALHFSSGSID 46
PRK06481 PRK06481
flavocytochrome c;
6-53 3.57e-03

flavocytochrome c;


Pssm-ID: 180584 [Multi-domain]  Cd Length: 506  Bit Score: 40.20  E-value: 3.57e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*...
gi 528881083   6 EEADVVIVGAGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQIGAHTL 53
Cdd:PRK06481  60 DKYDIVIVGAGGAGMSAAIEAKD------AGMNPVILEKMPVAGGNTM 101
Fer4_7 pfam12838
4Fe-4S dicluster domain; Superfamily includes proteins containing domains which bind to ...
 500-531 4.50e-03

4Fe-4S dicluster domain; Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contains two 4Fe4S clusters.


Pssm-ID: 463724 [Multi-domain]  Cd Length: 51  Bit Score: 35.58  E-value: 4.50e-03
                          10        20        30
                  ....*....|....*....|....*....|...
gi 528881083  500 CPAGVYEFVPVEQGDG-FRLQINAQNCVHCKTC 531
Cdd:pfam12838  11 CPVGAITLDEVGEKKGtKTVVIDPERCVGCGAC 43
PRK05249 PRK05249
Si-specific NAD(P)(+) transhydrogenase;
9-57 6.51e-03

Si-specific NAD(P)(+) transhydrogenase;


Pssm-ID: 235373 [Multi-domain]  Cd Length: 461  Bit Score: 38.98  E-value: 6.51e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*....
gi 528881083   9 DVVIVGAGPAGLSAAVrlkQLAVAHEkdiRVCLVEKAAQIGahtlsGAC 57
Cdd:PRK05249   7 DLVVIGSGPAGEGAAM---QAAKLGK---RVAVIERYRNVG-----GGC 44
PRK08132 PRK08132
FAD-dependent oxidoreductase; Provisional
 10-49 6.86e-03

FAD-dependent oxidoreductase; Provisional


Pssm-ID: 236158 [Multi-domain]  Cd Length: 547  Bit Score: 39.08  E-value: 6.86e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 528881083  10 VVIVGAGPAGLSAAVRLKQlavaheKDIRVCLVEKAAQIG 49
Cdd:PRK08132  26 VVVVGAGPVGLALAIDLAQ------QGVPVVLLDDDDTLS 59
FAD_oxidored pfam12831
FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases ...
 9-49 9.99e-03

FAD dependent oxidoreductase; This family of proteins contains FAD dependent oxidoreductases and related proteins.


Pssm-ID: 432816 [Multi-domain]  Cd Length: 420  Bit Score: 38.36  E-value: 9.99e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 528881083    9 DVVIVGAGPAGLSAAVRLKQLAVahekdiRVCLVEKAAQIG 49
Cdd:pfam12831   1 DVVVVGGGPAGVAAAIAAARAGA------KVLLVERRGFLG 35
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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