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Conserved domains on  [gi|282398127|ref|NP_001164192|]
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breast cancer anti-estrogen resistance protein 1 isoform 9 [Homo sapiens]

Protein Classification

Serine_rich_CAS and FAT-like_BCAR1_C domain-containing protein( domain architecture ID 12271682)

Serine_rich_CAS and FAT-like_BCAR1_C domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
CAS_C pfam12026
Crk-Associated Substrate C-terminal domain; This is a C-terminal domain found in CAS family ...
444-654 5.01e-101

Crk-Associated Substrate C-terminal domain; This is a C-terminal domain found in CAS family members. The CAS (Crk-Associated Substrate) protein family is a group of scaffolding proteins that play important modulatory roles in both normal and pathological cell growth regulation. They contain an N-terminal Src homology 3 (SH3) domain pfam00018 and a substrate domain (SD). The SD contains a large number of YxxP motifs, which when phosphorylated by Src-family kinases provide canonical binding sites for proteins containing SH2 domains such as Crk, Crk-L, CRKII presumed domain is functionally uncharacterized.


:

Pssm-ID: 463437  Cd Length: 202  Bit Score: 306.62  E-value: 5.01e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127  444 ENSEGGWMEDYDYVHLQGKEEFEKTQKELLEK-------GSITRQGKSQLELQQlkqferleQEVSRPIdHDLANWTPAQ 516
Cdd:pfam12026   1 ENEGKSWMEDYDYVHLQGKEEFERQQKELLEKlpaeeqfENLIKQSKSQLEQQQ--------QEVTQPV-EDPSNWTPPQ 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127  517 PlapgrtgGLGPSDRQLLLFYLEQCEANLTTLTNAVDAFFTAVATNQPPKIFVAHSKFVILSAHKLVFIGDTLSRQAKAA 596
Cdd:pfam12026  72 S-------QLSPNDRQLLLFYSEQCETHFGALLNAIDAFFSSLSNNQPPKIFVAHSKFVILSAHKLVFIGDTLCRQASAA 144
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 282398127  597 DVRSQVTHYSNLLCDLLRGIVATTKAAALQYPSPSAAQDMVERVKELGHSTQQFRRVL 654
Cdd:pfam12026 145 DVRNRVLHCSNALCELLKTLVLATKKAALQYPSPAAVQEMVDRVTELSHHAQQFKTVL 202
Serine_rich_CAS super family cl07433
Serine rich Four helix bundle domain of CAS (Crk-Associated Substrate) scaffolding proteins; a ...
244-400 2.11e-66

Serine rich Four helix bundle domain of CAS (Crk-Associated Substrate) scaffolding proteins; a protein interaction module; CAS proteins function as molecular scaffolds to regulate protein complexes that are involved in many cellular processes including migration, chemotaxis, apoptosis, differentiation, and progenitor cell function. They mediate the signaling of integrins at focal adhesions where they localize, and thus, regulate cell invasion and survival. Over-expression of these proteins is implicated in poor prognosis, increased metastasis, and resistance to chemotherapeutics in many cancers such as breast, lung, melanoma, and glioblastoma. CAS proteins have also been linked to the pathogenesis of inflammatory disorders, Alzheimer's, Parkinson's, and developmental defects. They share a common domain structure containing protein interaction modules that enable their scaffolding function, including an N-terminal SH3 domain, an unstructured substrate domain that contains many YxxP motifs, a serine-rich four-helix bundle, and a FAT-like C-terminal domain. Vertebrates contain four CAS proteins: BCAR1 (or p130Cas), NEDD9 (or HEF1), EFS (or SIN), and CASS4 (or HEPL). CAS proteins associate with the 14-3-3 family; this interaction is regulated by integrin-mediated cell adhesion. The serine rich four helix bundle domain of BCAR1 has been shown to bind 14-3-3 in a phosphorylation-dependent manner. This domain is structurally similar to other helical bundles found in cell adhesion components such as alpha-catenin, vinculin, and FAK, and may bind other proteins in addition to the 14-3-3 family.


The actual alignment was detected with superfamily member cd11552:

Pssm-ID: 471673  Cd Length: 157  Bit Score: 214.77  E-value: 2.11e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127 244 LELEVAVEALARLQQGVSATVAHLLDLAGsagatGSWRSPSEPqEPLVQDLQAAVAAVQSAVHELLEFARSAVGNAAHTS 323
Cdd:cd11552    1 LDLEAAMETLARLQQGVSSSVSHLMSFIG-----GNWRSPEHM-EANVQDIHAAVEGVHGAVRELLEFARGAVSNAAQAS 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127 324 DRALHAKLSRQLQKMEDVHQTLVAHGQALDAGRGGSGA------TLEDLDRLVACSRAVPEDAKQLASFLHGNASLLFRR 397
Cdd:cd11552   75 DRTLHAKLSRQLQKMEEVYQTLVRHSQALDACRWSPAAlaapgpTLDDLDRLVMYSRGVPDDAKQLASFLHGNASLLFRR 154

                 ...
gi 282398127 398 TKA 400
Cdd:cd11552  155 TKA 157
ALP_like super family cl23718
alkaline phosphatases and sulfatases; This family includes alkaline phosphatases and ...
50-80 8.44e-03

alkaline phosphatases and sulfatases; This family includes alkaline phosphatases and sulfatases. Alkaline phosphatases are non-specific phosphomonoesterases that catalyze the hydrolysis reaction via a phosphoseryl intermediate to produce inorganic phosphate and the corresponding alcohol, optimally at high pH. Alkaline phosphatase exists as a dimer, each monomer binding 2 zinc atoms and one magnesium atom, which are essential for enzymatic activity. Sulfatases catalyze the hydrolysis of sulfate esters from wide range of substrates, including steroids, carbohydrates and proteins. Sulfate esters may be formed from various alcohols and amines. The biological roles of sulfatase includes the cycling of sulfur in the environment, in the degradation of sulfated glycosaminoglycans and glycolipids in the lysosome, and in remodeling sulfated glycosaminoglycans in the extracellular space. Both alkaline phosphatase and sulfatase are essential for human metabolism. Deficiency of individual enzyme cause genetic diseases.


The actual alignment was detected with superfamily member PRK10649:

Pssm-ID: 474031 [Multi-domain]  Cd Length: 577  Bit Score: 39.30  E-value: 8.44e-03
                         10        20        30
                 ....*....|....*....|....*....|.
gi 282398127  50 SQYGQEVYDTPPMAVKGPNGRDPLLEVYDVP 80
Cdd:PRK10649 460 SDHGEEVYDTPPHKTQGRNEDNPTRHMYTIP 490
 
Name Accession Description Interval E-value
CAS_C pfam12026
Crk-Associated Substrate C-terminal domain; This is a C-terminal domain found in CAS family ...
444-654 5.01e-101

Crk-Associated Substrate C-terminal domain; This is a C-terminal domain found in CAS family members. The CAS (Crk-Associated Substrate) protein family is a group of scaffolding proteins that play important modulatory roles in both normal and pathological cell growth regulation. They contain an N-terminal Src homology 3 (SH3) domain pfam00018 and a substrate domain (SD). The SD contains a large number of YxxP motifs, which when phosphorylated by Src-family kinases provide canonical binding sites for proteins containing SH2 domains such as Crk, Crk-L, CRKII presumed domain is functionally uncharacterized.


Pssm-ID: 463437  Cd Length: 202  Bit Score: 306.62  E-value: 5.01e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127  444 ENSEGGWMEDYDYVHLQGKEEFEKTQKELLEK-------GSITRQGKSQLELQQlkqferleQEVSRPIdHDLANWTPAQ 516
Cdd:pfam12026   1 ENEGKSWMEDYDYVHLQGKEEFERQQKELLEKlpaeeqfENLIKQSKSQLEQQQ--------QEVTQPV-EDPSNWTPPQ 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127  517 PlapgrtgGLGPSDRQLLLFYLEQCEANLTTLTNAVDAFFTAVATNQPPKIFVAHSKFVILSAHKLVFIGDTLSRQAKAA 596
Cdd:pfam12026  72 S-------QLSPNDRQLLLFYSEQCETHFGALLNAIDAFFSSLSNNQPPKIFVAHSKFVILSAHKLVFIGDTLCRQASAA 144
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 282398127  597 DVRSQVTHYSNLLCDLLRGIVATTKAAALQYPSPSAAQDMVERVKELGHSTQQFRRVL 654
Cdd:pfam12026 145 DVRNRVLHCSNALCELLKTLVLATKKAALQYPSPAAVQEMVDRVTELSHHAQQFKTVL 202
FAT-like_BCAR1_C cd11569
C-terminal FAT-like Four helix bundle domain, also called DUF3513, of CAS (Crk-Associated ...
525-657 1.01e-91

C-terminal FAT-like Four helix bundle domain, also called DUF3513, of CAS (Crk-Associated Substrate) scaffolding protein, Breast Cancer Anti-estrogen Resistance 1; a protein interaction module; BCAR1, also called p130cas or CASS1, is the founding member of the CAS family of scaffolding proteins and was originally identified through its ability to associate with Crk. The name BCAR1 was designated because the human gene was identified in a screen for genes that promote resistance to tamoxifen. It is widely expressed and its deletion is lethal in mice. It plays a role in regulating cell motility, survival, proliferation, transformation, cancer progression, and bacterial pathogenesis. CAS proteins function as molecular scaffolds to regulate protein complexes that are involved in many cellular processes. They share a common domain structure containing protein interaction modules that enable their scaffolding function, including an N-terminal SH3 domain, an unstructured substrate domain that contains many YxxP motifs, a serine-rich four-helix bundle, and a FAT-like C-terminal domain, which binds to the C-terminal domain of NSPs (novel SH2-containing proteins) to form multidomain signaling modules that mediate cell migration and invasion.


Pssm-ID: 211410  Cd Length: 133  Bit Score: 279.95  E-value: 1.01e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127 525 GLGPSDRQLLLFYLEQCEANLTTLTNAVDAFFTAVATNQPPKIFVAHSKFVILSAHKLVFIGDTLSRQAKAADVRSQVTH 604
Cdd:cd11569    1 ALGPSDRQLLLFYQEQCEANVTTLTNAIDAFFTSISSNQPPKIFVAHSKFVILSAHKLVFIGDTLSRQAKAADVRSKVTH 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 282398127 605 YSNLLCDLLRGIVATTKAAALQYPSPSAAQDMVERVKELGHSTQQFRRVLGQL 657
Cdd:cd11569   81 YSNLLCEKLKEIVLSTKTAALQYPSPAAAKDMVERVKELGGSTQQFRMVLGQL 133
Serine_rich_BCAR1 cd11552
Serine rich Four helix bundle domain of CAS (Crk-Associated Substrate) scaffolding protein, ...
244-400 2.11e-66

Serine rich Four helix bundle domain of CAS (Crk-Associated Substrate) scaffolding protein, Breast Cancer Anti-estrogen Resistance 1; a protein interaction module; BCAR1, also called p130cas or CASS1, is the founding member of the CAS family of scaffolding proteins and was originally identified through its ability to associate with Crk. The name BCAR1 was designated because the human gene was identified in a screen for genes that promote resistance to tamoxifen. It is widely expressed and its deletion is lethal in mice. It plays a role in regulating cell motility, survival, proliferation, transformation, cancer progression, and bacterial pathogenesis. CAS proteins function as molecular scaffolds to regulate protein complexes that are involved in many cellular processes. They share a common domain structure containing protein interaction modules that enable their scaffolding function, including an N-terminal SH3 domain, an unstructured substrate domain that contains many YxxP motifs, a serine-rich four-helix bundle, and a FAT-like C-terminal domain. CAS proteins associate with the 14-3-3 family; this interaction is regulated by integrin-mediated cell adhesion. The serine rich four helix bundle domain of BCAR1 has been shown to bind 14-3-3 in a phosphorylation-dependent manner. This domain is structurally similar to other helical bundles found in cell adhesion components such as alpha-catenin, vinculin, and FAK, and may bind other proteins in addition to the 14-3-3 family.


Pssm-ID: 211406  Cd Length: 157  Bit Score: 214.77  E-value: 2.11e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127 244 LELEVAVEALARLQQGVSATVAHLLDLAGsagatGSWRSPSEPqEPLVQDLQAAVAAVQSAVHELLEFARSAVGNAAHTS 323
Cdd:cd11552    1 LDLEAAMETLARLQQGVSSSVSHLMSFIG-----GNWRSPEHM-EANVQDIHAAVEGVHGAVRELLEFARGAVSNAAQAS 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127 324 DRALHAKLSRQLQKMEDVHQTLVAHGQALDAGRGGSGA------TLEDLDRLVACSRAVPEDAKQLASFLHGNASLLFRR 397
Cdd:cd11552   75 DRTLHAKLSRQLQKMEEVYQTLVRHSQALDACRWSPAAlaapgpTLDDLDRLVMYSRGVPDDAKQLASFLHGNASLLFRR 154

                 ...
gi 282398127 398 TKA 400
Cdd:cd11552  155 TKA 157
Serine_rich pfam08824
Serine rich protein interaction domain; This is a serine rich domain that is found in the ...
244-398 9.86e-54

Serine rich protein interaction domain; This is a serine rich domain that is found in the docking protein p130(cas) (Crk-associated substrate). This domain folds into a four helix bundle which is associated with protein-protein interactions.


Pssm-ID: 462610  Cd Length: 157  Bit Score: 181.23  E-value: 9.86e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127  244 LELEVAVEALARLQQGVSATVAHLLDLAGSagatgSWRSPsEPQEPLVQDLQAAVAAVQSAVHELLEFARSAVGNAAHTS 323
Cdd:pfam08824   1 LDLDSALETLSRLQQEVESSVSKLMSFVSS-----NWRSR-ENLEAHLNEIRRAVDRVRQSLREFLEFARGAVGNAAQLT 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127  324 DRALHAKLSRQLQKMEDVHQTLVAHGQALDAG--------RGGSGATLEDLDRLVACSRAVPEDAKQLASFLHGNASLLF 395
Cdd:pfam08824  75 DSNLQTKLRKQLQRLEDSYQILLQTSQALDSCgwsldvlaTDKPQNSPDDLDRFVMVARTVPDDVKQLASIIQGNGSLLF 154

                  ...
gi 282398127  396 RRT 398
Cdd:pfam08824 155 KRA 157
PRK10649 PRK10649
phosphoethanolamine transferase CptA;
50-80 8.44e-03

phosphoethanolamine transferase CptA;


Pssm-ID: 182617 [Multi-domain]  Cd Length: 577  Bit Score: 39.30  E-value: 8.44e-03
                         10        20        30
                 ....*....|....*....|....*....|.
gi 282398127  50 SQYGQEVYDTPPMAVKGPNGRDPLLEVYDVP 80
Cdd:PRK10649 460 SDHGEEVYDTPPHKTQGRNEDNPTRHMYTIP 490
 
Name Accession Description Interval E-value
CAS_C pfam12026
Crk-Associated Substrate C-terminal domain; This is a C-terminal domain found in CAS family ...
444-654 5.01e-101

Crk-Associated Substrate C-terminal domain; This is a C-terminal domain found in CAS family members. The CAS (Crk-Associated Substrate) protein family is a group of scaffolding proteins that play important modulatory roles in both normal and pathological cell growth regulation. They contain an N-terminal Src homology 3 (SH3) domain pfam00018 and a substrate domain (SD). The SD contains a large number of YxxP motifs, which when phosphorylated by Src-family kinases provide canonical binding sites for proteins containing SH2 domains such as Crk, Crk-L, CRKII presumed domain is functionally uncharacterized.


Pssm-ID: 463437  Cd Length: 202  Bit Score: 306.62  E-value: 5.01e-101
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127  444 ENSEGGWMEDYDYVHLQGKEEFEKTQKELLEK-------GSITRQGKSQLELQQlkqferleQEVSRPIdHDLANWTPAQ 516
Cdd:pfam12026   1 ENEGKSWMEDYDYVHLQGKEEFERQQKELLEKlpaeeqfENLIKQSKSQLEQQQ--------QEVTQPV-EDPSNWTPPQ 71
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127  517 PlapgrtgGLGPSDRQLLLFYLEQCEANLTTLTNAVDAFFTAVATNQPPKIFVAHSKFVILSAHKLVFIGDTLSRQAKAA 596
Cdd:pfam12026  72 S-------QLSPNDRQLLLFYSEQCETHFGALLNAIDAFFSSLSNNQPPKIFVAHSKFVILSAHKLVFIGDTLCRQASAA 144
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 282398127  597 DVRSQVTHYSNLLCDLLRGIVATTKAAALQYPSPSAAQDMVERVKELGHSTQQFRRVL 654
Cdd:pfam12026 145 DVRNRVLHCSNALCELLKTLVLATKKAALQYPSPAAVQEMVDRVTELSHHAQQFKTVL 202
FAT-like_BCAR1_C cd11569
C-terminal FAT-like Four helix bundle domain, also called DUF3513, of CAS (Crk-Associated ...
525-657 1.01e-91

C-terminal FAT-like Four helix bundle domain, also called DUF3513, of CAS (Crk-Associated Substrate) scaffolding protein, Breast Cancer Anti-estrogen Resistance 1; a protein interaction module; BCAR1, also called p130cas or CASS1, is the founding member of the CAS family of scaffolding proteins and was originally identified through its ability to associate with Crk. The name BCAR1 was designated because the human gene was identified in a screen for genes that promote resistance to tamoxifen. It is widely expressed and its deletion is lethal in mice. It plays a role in regulating cell motility, survival, proliferation, transformation, cancer progression, and bacterial pathogenesis. CAS proteins function as molecular scaffolds to regulate protein complexes that are involved in many cellular processes. They share a common domain structure containing protein interaction modules that enable their scaffolding function, including an N-terminal SH3 domain, an unstructured substrate domain that contains many YxxP motifs, a serine-rich four-helix bundle, and a FAT-like C-terminal domain, which binds to the C-terminal domain of NSPs (novel SH2-containing proteins) to form multidomain signaling modules that mediate cell migration and invasion.


Pssm-ID: 211410  Cd Length: 133  Bit Score: 279.95  E-value: 1.01e-91
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127 525 GLGPSDRQLLLFYLEQCEANLTTLTNAVDAFFTAVATNQPPKIFVAHSKFVILSAHKLVFIGDTLSRQAKAADVRSQVTH 604
Cdd:cd11569    1 ALGPSDRQLLLFYQEQCEANVTTLTNAIDAFFTSISSNQPPKIFVAHSKFVILSAHKLVFIGDTLSRQAKAADVRSKVTH 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 282398127 605 YSNLLCDLLRGIVATTKAAALQYPSPSAAQDMVERVKELGHSTQQFRRVLGQL 657
Cdd:cd11569   81 YSNLLCEKLKEIVLSTKTAALQYPSPAAAKDMVERVKELGGSTQQFRMVLGQL 133
FAT-like_CAS_C cd11564
C-terminal FAT-like Four helix bundle domain, also called DUF3513, of CAS (Crk-Associated ...
530-655 4.83e-72

C-terminal FAT-like Four helix bundle domain, also called DUF3513, of CAS (Crk-Associated Substrate) scaffolding proteins; a protein interaction module; CAS proteins function as molecular scaffolds to regulate protein complexes that are involved in many cellular processes including migration, chemotaxis, apoptosis, differentiation, and progenitor cell function. They mediate the signaling of integrins at focal adhesions where they localize, and thus, regulate cell invasion and survival. Over-expression of these proteins is implicated in poor prognosis, increased metastasis, and resistance to chemotherapeutics in many cancers such as breast, lung, melanoma, and glioblastoma. CAS proteins have also been linked to the pathogenesis of inflammatory disorders, Alzheimer's, Parkinson's, and developmental defects. They share a common domain structure containing protein interaction modules that enable their scaffolding function, including an N-terminal SH3 domain, an unstructured substrate domain that contains many YxxP motifs, a serine-rich four-helix bundle, and a FAT-like C-terminal domain. Vertebrates contain four CAS proteins: BCAR1 (or p130Cas), NEDD9 (or HEF1), EFS (or SIN), and CASS4 (or HEPL). The FAT-like C-terminal domain of CAS proteins binds to the C-terminal domain of NSPs (novel SH2-containing proteins) to form multidomain signaling modules that mediate cell migration and invasion.


Pssm-ID: 211408  Cd Length: 126  Bit Score: 228.66  E-value: 4.83e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127 530 DRQLLLFYLEQCEANLTTLTNAVDAFFTAVATNQPPKIFVAHSKFVILSAHKLVFIGDTLSRQAKAADVRSQVTHYSNLL 609
Cdd:cd11564    1 DRQLLLFYSEQCESHFGALQKAIDAFLSSVESNQPPKVFVAHSKFVILSAHKLVFIGDTLCRNVQSADVRNKVLRCSNQL 80
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 282398127 610 CDLLRGIVATTKAAALQYPSPSAAQDMVERVKELGHSTQQFRRVLG 655
Cdd:cd11564   81 CEALKTVVLATKKAALQYPSVAAVQEMVDRVVELSHHAQQFKTSLG 126
Serine_rich_BCAR1 cd11552
Serine rich Four helix bundle domain of CAS (Crk-Associated Substrate) scaffolding protein, ...
244-400 2.11e-66

Serine rich Four helix bundle domain of CAS (Crk-Associated Substrate) scaffolding protein, Breast Cancer Anti-estrogen Resistance 1; a protein interaction module; BCAR1, also called p130cas or CASS1, is the founding member of the CAS family of scaffolding proteins and was originally identified through its ability to associate with Crk. The name BCAR1 was designated because the human gene was identified in a screen for genes that promote resistance to tamoxifen. It is widely expressed and its deletion is lethal in mice. It plays a role in regulating cell motility, survival, proliferation, transformation, cancer progression, and bacterial pathogenesis. CAS proteins function as molecular scaffolds to regulate protein complexes that are involved in many cellular processes. They share a common domain structure containing protein interaction modules that enable their scaffolding function, including an N-terminal SH3 domain, an unstructured substrate domain that contains many YxxP motifs, a serine-rich four-helix bundle, and a FAT-like C-terminal domain. CAS proteins associate with the 14-3-3 family; this interaction is regulated by integrin-mediated cell adhesion. The serine rich four helix bundle domain of BCAR1 has been shown to bind 14-3-3 in a phosphorylation-dependent manner. This domain is structurally similar to other helical bundles found in cell adhesion components such as alpha-catenin, vinculin, and FAK, and may bind other proteins in addition to the 14-3-3 family.


Pssm-ID: 211406  Cd Length: 157  Bit Score: 214.77  E-value: 2.11e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127 244 LELEVAVEALARLQQGVSATVAHLLDLAGsagatGSWRSPSEPqEPLVQDLQAAVAAVQSAVHELLEFARSAVGNAAHTS 323
Cdd:cd11552    1 LDLEAAMETLARLQQGVSSSVSHLMSFIG-----GNWRSPEHM-EANVQDIHAAVEGVHGAVRELLEFARGAVSNAAQAS 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127 324 DRALHAKLSRQLQKMEDVHQTLVAHGQALDAGRGGSGA------TLEDLDRLVACSRAVPEDAKQLASFLHGNASLLFRR 397
Cdd:cd11552   75 DRTLHAKLSRQLQKMEEVYQTLVRHSQALDACRWSPAAlaapgpTLDDLDRLVMYSRGVPDDAKQLASFLHGNASLLFRR 154

                 ...
gi 282398127 398 TKA 400
Cdd:cd11552  155 TKA 157
Serine_rich_CAS cd11549
Serine rich Four helix bundle domain of CAS (Crk-Associated Substrate) scaffolding proteins; a ...
244-399 1.03e-56

Serine rich Four helix bundle domain of CAS (Crk-Associated Substrate) scaffolding proteins; a protein interaction module; CAS proteins function as molecular scaffolds to regulate protein complexes that are involved in many cellular processes including migration, chemotaxis, apoptosis, differentiation, and progenitor cell function. They mediate the signaling of integrins at focal adhesions where they localize, and thus, regulate cell invasion and survival. Over-expression of these proteins is implicated in poor prognosis, increased metastasis, and resistance to chemotherapeutics in many cancers such as breast, lung, melanoma, and glioblastoma. CAS proteins have also been linked to the pathogenesis of inflammatory disorders, Alzheimer's, Parkinson's, and developmental defects. They share a common domain structure containing protein interaction modules that enable their scaffolding function, including an N-terminal SH3 domain, an unstructured substrate domain that contains many YxxP motifs, a serine-rich four-helix bundle, and a FAT-like C-terminal domain. Vertebrates contain four CAS proteins: BCAR1 (or p130Cas), NEDD9 (or HEF1), EFS (or SIN), and CASS4 (or HEPL). CAS proteins associate with the 14-3-3 family; this interaction is regulated by integrin-mediated cell adhesion. The serine rich four helix bundle domain of BCAR1 has been shown to bind 14-3-3 in a phosphorylation-dependent manner. This domain is structurally similar to other helical bundles found in cell adhesion components such as alpha-catenin, vinculin, and FAK, and may bind other proteins in addition to the 14-3-3 family.


Pssm-ID: 211403  Cd Length: 159  Bit Score: 189.34  E-value: 1.03e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127 244 LELEVAVEALARLQQGVSATVAHLLDLAGSagatgSWRSPsEPQEPLVQDLQAAVAAVQSAVHELLEFARSAVGNAAHTS 323
Cdd:cd11549    1 LDLDAAMEKLVRLQQEVSSSVSNLLSFVSS-----NWRSR-ENLEPNIDEIKTAVDRLRTSLHEFLEFARGALANAANAS 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127 324 DRALHAKLSRQLQKMEDVHQTLVAHGQALDAG--------RGGSGATLEDLDRLVACSRAVPEDAKQLASFLHGNASLLF 395
Cdd:cd11549   75 DKNLQLKLRRQLQPLEDSHQILSQTSQALDDCnwslealvDNSPSNKPDDLDRFVMCARTLPDDAKQLASFIHGNASLLF 154

                 ....
gi 282398127 396 RRTK 399
Cdd:cd11549  155 KRAP 158
FAT-like_NEDD9_C cd11570
C-terminal FAT-like Four helix bundle domain, also called DUF3513, of CAS (Crk-Associated ...
530-657 4.63e-56

C-terminal FAT-like Four helix bundle domain, also called DUF3513, of CAS (Crk-Associated Substrate) scaffolding protein, Neural precursor cell Expressed, Developmentally Down-regulated 9; a protein interaction module; NEDD9 is also called human enhancer of filamentation 1 (HEF1) or CAS-L (Crk-associated substrate in lymphocyte). It was first described as a gene predominantly expressed in early embryonic brain, and was also isolated from a screen of human proteins that regulate filamentous budding in yeast, and as a tyrosine phosphorylated protein in lymphocytes. It promotes metastasis in different solid tumors. NEDD9 localizes in focal adhesions and associates with FAK and Abl kinase. It also interacts with SMAD3 and the proteasomal machinery which allows its rapid turnover; these interactions are not shared by other CAS proteins. CAS proteins function as molecular scaffolds to regulate protein complexes that are involved in many cellular processes. They share a common domain structure containing protein interaction modules that enable their scaffolding function, including an N-terminal SH3 domain, an unstructured substrate domain that contains many YxxP motifs, a serine-rich four-helix bundle, and a FAT-like C-terminal domain, which binds to the C-terminal domain of NSPs (novel SH2-containing proteins) to form multidomain signaling modules that mediate cell migration and invasion.


Pssm-ID: 211411  Cd Length: 128  Bit Score: 186.27  E-value: 4.63e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127 530 DRQLLLFYLEQCEANLTTLTNAVDAFFTAVATNQPPKIFVAHSKFVILSAHKLVFIGDTLSRQAKAADVRSQVTHYSNLL 609
Cdd:cd11570    1 DRQLLGFYADQCETHFISLLNAIDAFFSCVSSGQPPRIFVAHSKFVILSAHKLVFIGDTLTRQVTVQDIRNRVMNSSNQL 80
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 282398127 610 CDLLRGIVATTKAAALQYPSPSAAQDMVERVKELGHSTQQFRRVLGQL 657
Cdd:cd11570   81 CELLKTIVMATKMAALHYPSTAALQEMVDRVTDLSHLAQLFKLSLSQM 128
Serine_rich pfam08824
Serine rich protein interaction domain; This is a serine rich domain that is found in the ...
244-398 9.86e-54

Serine rich protein interaction domain; This is a serine rich domain that is found in the docking protein p130(cas) (Crk-associated substrate). This domain folds into a four helix bundle which is associated with protein-protein interactions.


Pssm-ID: 462610  Cd Length: 157  Bit Score: 181.23  E-value: 9.86e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127  244 LELEVAVEALARLQQGVSATVAHLLDLAGSagatgSWRSPsEPQEPLVQDLQAAVAAVQSAVHELLEFARSAVGNAAHTS 323
Cdd:pfam08824   1 LDLDSALETLSRLQQEVESSVSKLMSFVSS-----NWRSR-ENLEAHLNEIRRAVDRVRQSLREFLEFARGAVGNAAQLT 74
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127  324 DRALHAKLSRQLQKMEDVHQTLVAHGQALDAG--------RGGSGATLEDLDRLVACSRAVPEDAKQLASFLHGNASLLF 395
Cdd:pfam08824  75 DSNLQTKLRKQLQRLEDSYQILLQTSQALDSCgwsldvlaTDKPQNSPDDLDRFVMVARTVPDDVKQLASIIQGNGSLLF 154

                  ...
gi 282398127  396 RRT 398
Cdd:pfam08824 155 KRA 157
FAT-like_EFS_C cd11571
C-terminal FAT-like Four helix bundle domain, also called DUF3513, of CAS (Crk-Associated ...
530-658 3.66e-42

C-terminal FAT-like Four helix bundle domain, also called DUF3513, of CAS (Crk-Associated Substrate) scaffolding protein, Embryonal Fyn-associated Substrate; a protein interaction module; EFS is also called HEFS, CASS3 (CAS scaffolding protein family member 3) or SIN (Src-interacting protein). It was identified based on interactions with the Src kinases, Fyn and Yes. It plays a role in thymocyte development and acts as a negative regulator of T cell proliferation. CAS proteins function as molecular scaffolds to regulate protein complexes that are involved in many cellular processes. They share a common domain structure containing protein interaction modules that enable their scaffolding function, including an N-terminal SH3 domain, an unstructured substrate domain that contains many YxxP motifs, a serine-rich four-helix bundle, and a FAT-like C-terminal domain, which binds to the C-terminal domain of NSPs (novel SH2-containing proteins) to form multidomain signaling modules that mediate cell migration and invasion.


Pssm-ID: 211412  Cd Length: 130  Bit Score: 148.84  E-value: 3.66e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127 530 DRQLLLFYLEQCEANLTTLTNAVDAFFTAVATNQPPKIFVAHSKFVILSAHKLVFIGDTLSRQAKAADVRSQVTHYSNLL 609
Cdd:cd11571    2 DSQLLHFYAGQCQSHYSTLLAAVAALLSSTQANQPPRVFVPHGKRLIVAAHKLVFVGDTLGRLASSAPLRARVATAGGAL 81
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 282398127 610 CDLLRGIVATTKAAALQYPSPSAAQDMVERVKELGHSTQQFRRVLGQLA 658
Cdd:cd11571   82 CQALKAVVLATKGAALGYPSPPAAQEMAQCVADLSGQALQFTTLLQSLA 130
FAT-like_CASS4_C cd11568
C-terminal FAT-like Four helix bundle domain, also called DUF3513, of CAS (Crk-Associated ...
539-655 2.85e-28

C-terminal FAT-like Four helix bundle domain, also called DUF3513, of CAS (Crk-Associated Substrate) scaffolding protein family member 4; a protein interaction module; CASS4, also called HEPL (HEF1-EFS-p130Cas-like), localizes to focal adhesions and plays a role in regulating FAK activity, focal adhesion integrity, and cell spreading. It is most abundant in blood cells and lung tissue, and is also found in high levels in leukemia and ovarian cell lines. CAS proteins function as molecular scaffolds to regulate protein complexes that are involved in many cellular processes. They share a common domain structure containing protein interaction modules that enable their scaffolding function, including an N-terminal SH3 domain, an unstructured substrate domain that contains many YxxP motifs, a serine-rich four-helix bundle, and a FAT-like C-terminal domain, which binds to the C-terminal domain of NSPs (novel SH2-containing proteins) to form multidomain signaling modules that mediate cell migration and invasion.


Pssm-ID: 211409  Cd Length: 123  Bit Score: 109.55  E-value: 2.85e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127 539 EQCEANLTTLTNAVDAFFTAVATNQPPKIFVAHSKFVILSAHKLVfigDTLSRQAKAADVRSQVTHYSNLLCDLLRGIVA 618
Cdd:cd11568   10 EHCRLYFGALQKAISVFHSSLSSNQPPEVFISHSKLIIMVGQKLV---DTLCQEAKEREARNEILAGSSQLCALLKNLAL 86
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 282398127 619 TTKAAALQYPSPSAAQDMVERVKELGHSTQQFRRVLG 655
Cdd:cd11568   87 ATKNAALQYPSPAALRELQDIADELAKHTQQFRAMLE 123
Serine_rich_NEDD9 cd11550
Serine rich Four helix bundle domain of CAS (Crk-Associated Substrate) scaffolding protein, ...
244-398 1.09e-27

Serine rich Four helix bundle domain of CAS (Crk-Associated Substrate) scaffolding protein, Neural precursor cell Expressed, Developmentally Down-regulated 9; a protein interaction module; NEDD9 is also called human enhancer of filamentation 1 (HEF1) or CAS-L (Crk-associated substrate in lymphocyte). It was first described as a gene predominantly expressed in early embryonic brain, and was also isolated from a screen of human proteins that regulate filamentous budding in yeast, and as a tyrosine phosphorylated protein in lymphocytes. It promotes metastasis in different solid tumors. NEDD9 localizes in focal adhesions and associates with FAK and Abl kinase. It also interacts with SMAD3 and the proteasomal machinery which allows its rapid turnover; these interactions are not shared by other CAS proteins. CAS proteins function as molecular scaffolds to regulate protein complexes that are involved in many cellular processes. They share a common domain structure containing protein interaction modules that enable their scaffolding function, including an N-terminal SH3 domain, an unstructured substrate domain that contains many YxxP motifs, a serine-rich four-helix bundle, and a FAT-like C-terminal domain. CAS proteins associate with the 14-3-3 family; this interaction is regulated by integrin-mediated cell adhesion. The serine rich four helix bundle domain of BCAR1, another CAS protein, has been shown to bind 14-3-3 in a phosphorylation-dependent manner. This domain is structurally similar to other helical bundles found in cell adhesion components such as alpha-catenin, vinculin, and FAK, and may bind other proteins in addition to the 14-3-3 family.


Pssm-ID: 211404  Cd Length: 162  Bit Score: 109.57  E-value: 1.09e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127 244 LELEVAVEALARLQQGVSATVAHLLDLAgsagaTGSWRSPSEpQEPLVQDLQAAVAAVQSAVHELLEFARSAVGNAAHTS 323
Cdd:cd11550    4 LDPDTAIERLYRLQQAVESSVSNLMALV-----SPDWRTYSF-MERHINEIRTAVDRVELSLGEYLQFGKGAAANATALS 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127 324 DRALHAKLSRQLQKMEDVHQTLVAHGQALDA--------GRGGSGATLEDLDRLVACSRAVPEDAKQLASFLHGNASLLF 395
Cdd:cd11550   78 ENGLHNKMRRELQRLEDSHQILLQTYQDLNScnwslnilAANGHHNKCDDLDRFVMVAKTVPDDAKQLTTTIGSNAELLF 157

                 ...
gi 282398127 396 RRT 398
Cdd:cd11550  158 RRA 160
Serine_rich_CASS4 cd11551
Serine rich Four helix bundle domain of CAS (Crk-Associated Substrate) scaffolding protein ...
244-397 6.29e-19

Serine rich Four helix bundle domain of CAS (Crk-Associated Substrate) scaffolding protein family member 4; a protein interaction module; CASS4, also called HEPL (HEF1-EFS-p130Cas-like), localizes to focal adhesions and plays a role in regulating FAK activity, focal adhesion integrity, and cell spreading. It is most abundant in blood cells and lung tissue, and is also found in high levels in leukemia and ovarian cell lines. CAS proteins function as molecular scaffolds to regulate protein complexes that are involved in many cellular processes. They share a common domain structure containing protein interaction modules that enable their scaffolding function, including an N-terminal SH3 domain, an unstructured substrate domain that contains many YxxP motifs, a serine-rich four-helix bundle, and a FAT-like C-terminal domain. CAS proteins associate with the 14-3-3 family; this interaction is regulated by integrin-mediated cell adhesion. The serine rich four helix bundle domain of BCAR1, another CAS protein, has been shown to bind 14-3-3 in a phosphorylation-dependent manner. This domain is structurally similar to other helical bundles found in cell adhesion components such as alpha-catenin, vinculin, and FAK, and may bind other proteins in addition to the 14-3-3 family.


Pssm-ID: 211405  Cd Length: 159  Bit Score: 84.13  E-value: 6.29e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127 244 LELEVAVEALARLQQGVSATVAHLLDLAGSagatgSWRSpsepQEPLVQDLQA---AVAAVQSAVHELLEFARSAVGNAA 320
Cdd:cd11551    1 LDLEEAIETLTELQHAVSSSVASLMLFVSS-----KWRL----REHLEANLDQihrASDHITDSLDEFLDFARDVRGNAS 71
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 282398127 321 HTSDRALHAKLSRQLQKMEDVHQTLVAHGQALDaGRGGSGATL---------EDLDRLVACSRAVPEDAKQLASFLHGNA 391
Cdd:cd11551   72 RLTDSNLQTRIKKQLQILEDSFQILQETAEALD-NCNWSLEVLvddkpsqmpDDLERFVMVARTIPEDIKRFVSIIIANG 150

                 ....*.
gi 282398127 392 SLLFRR 397
Cdd:cd11551  151 KLLFRK 156
PRK10649 PRK10649
phosphoethanolamine transferase CptA;
50-80 8.44e-03

phosphoethanolamine transferase CptA;


Pssm-ID: 182617 [Multi-domain]  Cd Length: 577  Bit Score: 39.30  E-value: 8.44e-03
                         10        20        30
                 ....*....|....*....|....*....|.
gi 282398127  50 SQYGQEVYDTPPMAVKGPNGRDPLLEVYDVP 80
Cdd:PRK10649 460 SDHGEEVYDTPPHKTQGRNEDNPTRHMYTIP 490
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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