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Conserved domains on  [gi|255918178|ref|NP_001157628|]
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microspherule protein 1 isoform 2 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MCRS_N pfam13325
N-terminal region of micro-spherule protein; This domain is found in plants and higher ...
121-318 2.66e-133

N-terminal region of micro-spherule protein; This domain is found in plants and higher eukaryotes, and is the N-terminal region of micro-spherule proteins which repress the transactivation activities of Nrf1 (p45 nuclear factor-erythroid 2 (p45 NF-E2)-related factor 1). In conjunction with DIPA the full-length protein acts as a transcription repressor. The exact function of the region is not known.


:

Pssm-ID: 463845  Cd Length: 199  Bit Score: 382.02  E-value: 2.66e-133
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255918178  121 RWKPADDLLLINAVLQTNDLTSVHLGVKFSCRFTLREVQERWYALLYDPVISKLACQAMRQLHPEAIAAIQSKALFSKAE 200
Cdd:pfam13325   1 RWKPTDDLALITAVQQTNDLRAVHRGVKFSCRFTLQEIQERWYALLYDPTISRIAVAAMRNLHPEVVASVQSKALFSQAE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255918178  201 EQLLSKVGSSSQPTLETFQDLLHTHPDAFYLARTAKALQAHWQLMKQYYLLEDQTVQPLPKGDQV-LNFSDAEDLIDDSK 279
Cdd:pfam13325  81 EQLLGTIKSSSQPTLETFQELLDKNADVFHPSRTAKSLQNHWQLMKQYGLLPDQSVQPLPKGDQVlLSFSDAEEQLNDSE 160
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 255918178  280 LKDMRDEVLEHELTVADRRQKREIRQLEQELHKWQVLVD 318
Cdd:pfam13325 161 LSEPRDEALEHELALADRKNKREIRLLENELSRWQVLVD 199
FHA_MCRS1 cd22687
forkhead associated (FHA) domain found in microspherule protein 1 (MCRS1) and similar proteins; ...
328-432 3.91e-66

forkhead associated (FHA) domain found in microspherule protein 1 (MCRS1) and similar proteins; MCRS1, also called 58 kDa microspherule protein (MSP58), cell cycle-regulated factor p78, or INO80 complex subunit J, is a nuclear RNA-binding protein that interacts with fragile X mental retardation protein in polyribosomal ribonucleoparticles (mRNPs) from neurons. It is a cell-cycle-dependent protein that acts as an inhibitor of TERT telomerase activity. It associates with LPTS/PinX1 and reduces the telomere length. It modulates the transcription repressor activity of DAXX by recruiting it to the nucleolus. As part of the NSL complex, MCRS1 may be involved in acetylation of nucleosomal histone H4 on several lysine residues. MCRS1 is also a putative regulatory component of the chromatin remodeling INO80 complex, which is involved in transcriptional regulation, DNA replication, and probably DNA repair. MCRS1 contains an FHA domain at its C-terminus. The FHA domain is a small phosphopeptide recognition module.


:

Pssm-ID: 438739 [Multi-domain]  Cd Length: 105  Bit Score: 207.02  E-value: 3.91e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255918178 328 FDNQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQGVIKLKNNGDFFIANEGRRPIYIDGRPVL 407
Cdd:cd22687    1 FDSGALAVLRGRLVRYLMRSREVTIGRSTKDNQVDIDLSLEGPAWKISRRQAVIKLKNDGDFYIKNEGKRPIYVNGKPVP 80
                         90       100
                 ....*....|....*....|....*
gi 255918178 408 CGSKWRLSNNSVVEIASLRFVFLIN 432
Cdd:cd22687   81 TGEKAILNNNSLIEIGGLRFVFLIN 105
 
Name Accession Description Interval E-value
MCRS_N pfam13325
N-terminal region of micro-spherule protein; This domain is found in plants and higher ...
121-318 2.66e-133

N-terminal region of micro-spherule protein; This domain is found in plants and higher eukaryotes, and is the N-terminal region of micro-spherule proteins which repress the transactivation activities of Nrf1 (p45 nuclear factor-erythroid 2 (p45 NF-E2)-related factor 1). In conjunction with DIPA the full-length protein acts as a transcription repressor. The exact function of the region is not known.


Pssm-ID: 463845  Cd Length: 199  Bit Score: 382.02  E-value: 2.66e-133
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255918178  121 RWKPADDLLLINAVLQTNDLTSVHLGVKFSCRFTLREVQERWYALLYDPVISKLACQAMRQLHPEAIAAIQSKALFSKAE 200
Cdd:pfam13325   1 RWKPTDDLALITAVQQTNDLRAVHRGVKFSCRFTLQEIQERWYALLYDPTISRIAVAAMRNLHPEVVASVQSKALFSQAE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255918178  201 EQLLSKVGSSSQPTLETFQDLLHTHPDAFYLARTAKALQAHWQLMKQYYLLEDQTVQPLPKGDQV-LNFSDAEDLIDDSK 279
Cdd:pfam13325  81 EQLLGTIKSSSQPTLETFQELLDKNADVFHPSRTAKSLQNHWQLMKQYGLLPDQSVQPLPKGDQVlLSFSDAEEQLNDSE 160
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 255918178  280 LKDMRDEVLEHELTVADRRQKREIRQLEQELHKWQVLVD 318
Cdd:pfam13325 161 LSEPRDEALEHELALADRKNKREIRLLENELSRWQVLVD 199
FHA_MCRS1 cd22687
forkhead associated (FHA) domain found in microspherule protein 1 (MCRS1) and similar proteins; ...
328-432 3.91e-66

forkhead associated (FHA) domain found in microspherule protein 1 (MCRS1) and similar proteins; MCRS1, also called 58 kDa microspherule protein (MSP58), cell cycle-regulated factor p78, or INO80 complex subunit J, is a nuclear RNA-binding protein that interacts with fragile X mental retardation protein in polyribosomal ribonucleoparticles (mRNPs) from neurons. It is a cell-cycle-dependent protein that acts as an inhibitor of TERT telomerase activity. It associates with LPTS/PinX1 and reduces the telomere length. It modulates the transcription repressor activity of DAXX by recruiting it to the nucleolus. As part of the NSL complex, MCRS1 may be involved in acetylation of nucleosomal histone H4 on several lysine residues. MCRS1 is also a putative regulatory component of the chromatin remodeling INO80 complex, which is involved in transcriptional regulation, DNA replication, and probably DNA repair. MCRS1 contains an FHA domain at its C-terminus. The FHA domain is a small phosphopeptide recognition module.


Pssm-ID: 438739 [Multi-domain]  Cd Length: 105  Bit Score: 207.02  E-value: 3.91e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255918178 328 FDNQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQGVIKLKNNGDFFIANEGRRPIYIDGRPVL 407
Cdd:cd22687    1 FDSGALAVLRGRLVRYLMRSREVTIGRSTKDNQVDIDLSLEGPAWKISRRQAVIKLKNDGDFYIKNEGKRPIYVNGKPVP 80
                         90       100
                 ....*....|....*....|....*
gi 255918178 408 CGSKWRLSNNSVVEIASLRFVFLIN 432
Cdd:cd22687   81 TGEKAILNNNSLIEIGGLRFVFLIN 105
FHA smart00240
Forkhead associated domain; Found in eukaryotic and prokaryotic proteins. Putative nuclear ...
350-406 8.41e-07

Forkhead associated domain; Found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain.


Pssm-ID: 214578 [Multi-domain]  Cd Length: 52  Bit Score: 45.63  E-value: 8.41e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 255918178   350 ITLGRATKDNQIDVDLSlegpawKISRKQGVIKLKNNGDFFIANEGRR-PIYIDGRPV 406
Cdd:smart00240   1 VTIGRSSEDCDIQLDGP------SISRRHAVIVYDGGGRFYLIDLGSTnGTFVNGKRI 52
FHA pfam00498
FHA domain; The FHA (Forkhead-associated) domain is a phosphopeptide binding motif.
350-422 8.71e-06

FHA domain; The FHA (Forkhead-associated) domain is a phosphopeptide binding motif.


Pssm-ID: 459831 [Multi-domain]  Cd Length: 66  Bit Score: 43.33  E-value: 8.71e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 255918178  350 ITLGRATkdnqiDVDLSLEGPawKISRKQGVIKLKNNGDFFIANEG-RRPIYIDGRPVLcGSKWRLSNNSVVEI 422
Cdd:pfam00498   1 VTIGRSP-----DCDIVLDDP--SVSRRHAEIRYDGGGRFYLEDLGsTNGTFVNGQRLG-PEPVRLKDGDVIRL 66
 
Name Accession Description Interval E-value
MCRS_N pfam13325
N-terminal region of micro-spherule protein; This domain is found in plants and higher ...
121-318 2.66e-133

N-terminal region of micro-spherule protein; This domain is found in plants and higher eukaryotes, and is the N-terminal region of micro-spherule proteins which repress the transactivation activities of Nrf1 (p45 nuclear factor-erythroid 2 (p45 NF-E2)-related factor 1). In conjunction with DIPA the full-length protein acts as a transcription repressor. The exact function of the region is not known.


Pssm-ID: 463845  Cd Length: 199  Bit Score: 382.02  E-value: 2.66e-133
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255918178  121 RWKPADDLLLINAVLQTNDLTSVHLGVKFSCRFTLREVQERWYALLYDPVISKLACQAMRQLHPEAIAAIQSKALFSKAE 200
Cdd:pfam13325   1 RWKPTDDLALITAVQQTNDLRAVHRGVKFSCRFTLQEIQERWYALLYDPTISRIAVAAMRNLHPEVVASVQSKALFSQAE 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255918178  201 EQLLSKVGSSSQPTLETFQDLLHTHPDAFYLARTAKALQAHWQLMKQYYLLEDQTVQPLPKGDQV-LNFSDAEDLIDDSK 279
Cdd:pfam13325  81 EQLLGTIKSSSQPTLETFQELLDKNADVFHPSRTAKSLQNHWQLMKQYGLLPDQSVQPLPKGDQVlLSFSDAEEQLNDSE 160
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 255918178  280 LKDMRDEVLEHELTVADRRQKREIRQLEQELHKWQVLVD 318
Cdd:pfam13325 161 LSEPRDEALEHELALADRKNKREIRLLENELSRWQVLVD 199
FHA_MCRS1 cd22687
forkhead associated (FHA) domain found in microspherule protein 1 (MCRS1) and similar proteins; ...
328-432 3.91e-66

forkhead associated (FHA) domain found in microspherule protein 1 (MCRS1) and similar proteins; MCRS1, also called 58 kDa microspherule protein (MSP58), cell cycle-regulated factor p78, or INO80 complex subunit J, is a nuclear RNA-binding protein that interacts with fragile X mental retardation protein in polyribosomal ribonucleoparticles (mRNPs) from neurons. It is a cell-cycle-dependent protein that acts as an inhibitor of TERT telomerase activity. It associates with LPTS/PinX1 and reduces the telomere length. It modulates the transcription repressor activity of DAXX by recruiting it to the nucleolus. As part of the NSL complex, MCRS1 may be involved in acetylation of nucleosomal histone H4 on several lysine residues. MCRS1 is also a putative regulatory component of the chromatin remodeling INO80 complex, which is involved in transcriptional regulation, DNA replication, and probably DNA repair. MCRS1 contains an FHA domain at its C-terminus. The FHA domain is a small phosphopeptide recognition module.


Pssm-ID: 438739 [Multi-domain]  Cd Length: 105  Bit Score: 207.02  E-value: 3.91e-66
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255918178 328 FDNQTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLSLEGPAWKISRKQGVIKLKNNGDFFIANEGRRPIYIDGRPVL 407
Cdd:cd22687    1 FDSGALAVLRGRLVRYLMRSREVTIGRSTKDNQVDIDLSLEGPAWKISRRQAVIKLKNDGDFYIKNEGKRPIYVNGKPVP 80
                         90       100
                 ....*....|....*....|....*
gi 255918178 408 CGSKWRLSNNSVVEIASLRFVFLIN 432
Cdd:cd22687   81 TGEKAILNNNSLIEIGGLRFVFLIN 105
FHA_FKH1-like cd22701
forkhead associated (FHA) domain found in Saccharomyces cerevisiae fork head protein homolog 1 ...
333-431 3.95e-16

forkhead associated (FHA) domain found in Saccharomyces cerevisiae fork head protein homolog 1 (FKH1), 2 (FKH2) and similar proteins; This family includes FKH1 and FKH2, as well as pre-rRNA-processing protein FHL1. FKH1 and FKH2 are forkhead transcription factors that regulate the expression of the CLB2 cluster of genes during the G2/M phase of the mitotic cell cycle. The CLB2 cluster of genes includes mitotic regulators such as CLB1, CLB2, CDC5 and CDC20, as well as SWI5 and ACE2. FKH1 and FKH2 are involved in HMRa silencing. They associate with the coding regions of active genes and influence, in opposing ways, transcriptional elongation and termination, and coordinate early transcription elongation and pre-mRNA processing. Both FKH1 and FKH2 play a role as regulators of lifespan in collaboration with the anaphase-promoting complex (APC), likely through combined regulation of stress response, genomic stability, and cell cycle regulation. They also function in controlling yeast cell morphology by preventing pseudohyphal growth and act as rate-limiting replication origin activators via their interaction with the origin recognition complex (ORC). FHL1 is a forkhead protein that controls the pre-rRNA processing machinery in conjunction with IFH1. It might act as a transcriptional regulator of genes specifically involved in that process. IFH1 convert FHL1 from a repressor to an activator. This family also includes AtFHA1 and AtFHA2, which may play a role in the control of plant organ development. AtFHA2 is specifically involved in the regulation of stamen development. The FHA domain is a small phosphopeptide recognition module.


Pssm-ID: 438753 [Multi-domain]  Cd Length: 106  Bit Score: 73.81  E-value: 3.95e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255918178 333 LAVLRGRMVRYLMRSREITLGRATKDNQ------IDVDLsleGPAWKISRKQGVIKLK-NNGDFFIANEGRRPIYIDGRP 405
Cdd:cd22701    2 YAKLDGDDFTYYVQKLEVVLGRNSKNSSstaadsVDIDL---GPSKKISRRHARIFYDfTTQCFELSVLGRNGVKVDGIL 78
                         90       100
                 ....*....|....*....|....*..
gi 255918178 406 VLCGSKW-RLSNNSVVEIASLRFVFLI 431
Cdd:cd22701   79 VKPGSPPvPLRSGSLIQIGGVLFYFLL 105
FHA cd00060
forkhead associated (FHA) domain superfamily; Forkhead-associated (FHA) domains are small ...
342-429 3.20e-07

forkhead associated (FHA) domain superfamily; Forkhead-associated (FHA) domains are small phosphopeptide recognition modules mostly found in eubacteria and eukaryotes. It is about 95-120 residues long that fold into an 11-stranded beta-sandwich. FHA domains can mediate the recognition of phosphorylated and non-phosphorylated substrates, as well as protein oligomerization. They specifically recognize threonine phosphorylation (pThr) accompanying activation of protein serine/threonine kinases. FHA domains show diverse ligand specificity. They may recognize the pTXXD motif, the pTXXI/L motif, and TQ clusters (singly and multiply phosphorylated). In eukaryotes, FHA superfamily members include forkhead-type transcription factors, as well as other signaling proteins, such as many regulatory proteins, kinases, phosphatases, motor proteins called kinesins, and metabolic enzymes. Many of them localize to the nucleus, where they participate in establishing or maintaining cell cycle checkpoints, DNA repair, or transcriptional regulation. FHA domains play important roles in human diseases, particularly in relation to DNA damage responses and cancers. In bacteria, FHA domain-containing proteins may participate in injection of viral proteins into host cells, transmembrane transporters, and cell division. FHA domain-containing proteins rarely include more than one copy of the domain. The only exception in eukaryotes is the checkpoint kinase Rad53 from Saccharomyces cerevisiae, which harbors two FHA domains (FHA1 and FHA2) flanking a central kinase domain. The two FHA domains recognize different phosphorylated targets and function independently from one another. In contrast, Mycobacterium tuberculosis ABC transporter Rv1747 contains two FHA domains but only one of them is essential for protein function.


Pssm-ID: 438714 [Multi-domain]  Cd Length: 92  Bit Score: 48.04  E-value: 3.20e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255918178 342 RYLMRSREITLGRATkdnqiDVDLSLEGPawKISRKQGVIKLKNNGdFFIANEGRR-PIYIDGRPVlcGSKWRLSNNSVV 420
Cdd:cd00060   13 EFPLTKGVVTIGRSP-----DCDIVLDDP--SVSRRHARIEVDGGG-VYLEDLGSTnGTFVNGKRI--TPPVPLQDGDVI 82

                 ....*....
gi 255918178 421 EIASLRFVF 429
Cdd:cd00060   83 RLGDTTFRF 91
FHA smart00240
Forkhead associated domain; Found in eukaryotic and prokaryotic proteins. Putative nuclear ...
350-406 8.41e-07

Forkhead associated domain; Found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain.


Pssm-ID: 214578 [Multi-domain]  Cd Length: 52  Bit Score: 45.63  E-value: 8.41e-07
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 255918178   350 ITLGRATKDNQIDVDLSlegpawKISRKQGVIKLKNNGDFFIANEGRR-PIYIDGRPV 406
Cdd:smart00240   1 VTIGRSSEDCDIQLDGP------SISRRHAVIVYDGGGRFYLIDLGSTnGTFVNGKRI 52
FHA_FOXK cd22688
forkhead associated (FHA) domain found in the Forkhead box protein K (FOXK) subfamily; The ...
333-403 2.59e-06

forkhead associated (FHA) domain found in the Forkhead box protein K (FOXK) subfamily; The FOXK subfamily includes two-winged helix transcription factors, FOXK1 and FOXK2. FOXK1, also called myocyte nuclear factor (MNF), acts as a transcriptional regulator that binds to the upstream enhancer region (CCAC box) of myoglobin genes. It positively regulates Wnt/beta-catenin signaling by translocating dishevelled (DVL) proteins into the nucleus. It also reduces virus replication, probably by binding the interferon stimulated response element (ISRE) to promote antiviral gene expression. In addition, FOXK1 plays important roles in multiple human cancers. FOXK2, also called cellular transcription factor ILF-1 or interleukin enhancer-binding factor 1, is a transcriptional regulator that recognizes the core sequence 5'-TAAACA-3'. It binds to NFAT-like motifs (purine-rich) in the IL2 promoter. It also binds to the HIV-1 long terminal repeat. FOXK2 may be involved in both positive and negative regulation of important viral and cellular promoter elements. In addition, FOXK2 plays a critical role in suppressing tumorigenesis. The Forkhead (FH) domain is a winged helix DNA-binding domain. FOX transcription factors recognize the core sequence 5'-(A/C)AA(C/T)A-3'. The FHA domain is a small phosphopeptide recognition module.


Pssm-ID: 438740 [Multi-domain]  Cd Length: 100  Bit Score: 45.73  E-value: 2.59e-06
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 255918178 333 LAVLRGRMVRYLMRSREITLGRATKDNQIDVDLsleGPAWKISRKQGVIKLKnNGDFFIANEGRRPIYIDG 403
Cdd:cd22688    4 IARLEGREFEYLMRKSRVVIGRNSSRGPVDVNM---GHSSFISRKHLEIFYE-GGRFFLLCNGKNGIFVDG 70
FHA_Ki67 cd22673
forkhead associated (FHA) domain found in proliferation marker protein Ki-67 and similar ...
342-427 5.52e-06

forkhead associated (FHA) domain found in proliferation marker protein Ki-67 and similar proteins; Ki-67, also called antigen identified by monoclonal antibody Ki-67, antigen KI-67, or antigen Ki67, acts as a biological surfactant to disperse mitotic chromosomes. It is required to maintain individual mitotic chromosomes dispersed in the cytoplasm following nuclear envelope disassembly. Ki-67 binds DNA with a preference for supercoiled DNA and AT-rich DNA. It may also play a role in chromatin organization. Ki-67 contains an FHA domain at its N-terminus. The FHA domain is a small phosphopeptide recognition module.


Pssm-ID: 438725 [Multi-domain]  Cd Length: 95  Bit Score: 44.51  E-value: 5.52e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255918178 342 RYLMRSREITLGRatkDNQIDVDLSLEGpawkISRKQGVIKLKNNGDFFIANEGR-RPIYIDGRPVLcgSKWRLSNNSVV 420
Cdd:cd22673   15 RFPLTKKSCTFGR---DLSCDIRIQLPG----VSREHCRIEVDENGKAYLENLSTtNPTLVNGKAIE--KSAELKDGDVI 85

                 ....*....
gi 255918178 421 EIA--SLRF 427
Cdd:cd22673   86 TIGgrSFRF 94
FHA pfam00498
FHA domain; The FHA (Forkhead-associated) domain is a phosphopeptide binding motif.
350-422 8.71e-06

FHA domain; The FHA (Forkhead-associated) domain is a phosphopeptide binding motif.


Pssm-ID: 459831 [Multi-domain]  Cd Length: 66  Bit Score: 43.33  E-value: 8.71e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 255918178  350 ITLGRATkdnqiDVDLSLEGPawKISRKQGVIKLKNNGDFFIANEG-RRPIYIDGRPVLcGSKWRLSNNSVVEI 422
Cdd:pfam00498   1 VTIGRSP-----DCDIVLDDP--SVSRRHAEIRYDGGGRFYLEDLGsTNGTFVNGQRLG-PEPVRLKDGDVIRL 66
FHA_FOXK2 cd22723
forkhead associated (FHA) domain found in forkhead box protein K2 (FOXK2) and similar proteins; ...
331-403 1.03e-04

forkhead associated (FHA) domain found in forkhead box protein K2 (FOXK2) and similar proteins; FOXK2, also called cellular transcription factor ILF-1, or interleukin enhancer-binding factor 1, is a transcriptional regulator that recognizes the core sequence 5'-TAAACA-3'. It binds to NFAT-like motifs (purine-rich) in the IL2 promoter. It also binds to HIV-1 long terminal repeat. FOXK2 may be involved in both positive and negative regulation of important viral and cellular promoter elements. In addition, FOXK2 plays a critical role in suppressing tumorigenesis. The FHA domain is a small phosphopeptide recognition module.


Pssm-ID: 438775 [Multi-domain]  Cd Length: 111  Bit Score: 41.43  E-value: 1.03e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255918178 331 QTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLsleGPAWKISRKQ--------GVIKLKNNGDFFIANEGRRPIYID 402
Cdd:cd22723    2 PAVARLEGREFEYLMKKRSVTIGRNSSQGSVDVSM---GHSSFISRRHleiftageDGGDGGGGGDFYLRCLGKNGVFVD 78

                 .
gi 255918178 403 G 403
Cdd:cd22723   79 G 79
FHA_DUN1-like cd22683
forkhead associated (FHA) domain found in Saccharomyces cerevisiae DNA damage response protein ...
349-429 5.66e-04

forkhead associated (FHA) domain found in Saccharomyces cerevisiae DNA damage response protein kinase DUN1 and similar proteins; DUN1 is a protein kinase that controls the DNA damage response in yeast. It phosphorylates SML1 on serine residues and cooperates with the PAN deadenylation complex in the regulation of RAD5 mRNA levels and cell survival in response to replicational stress. It contains an FHA domain, which is a small phosphopeptide recognition module.


Pssm-ID: 438735 [Multi-domain]  Cd Length: 96  Bit Score: 39.01  E-value: 5.66e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255918178 349 EITLGRAtkdnqIDVDLSLEGPAwkISRKQGVIKLKNNGDFFIANEGRRPIYIDGRPvLCGSKWRLSNNSVVEIASLRFV 428
Cdd:cd22683   22 VTTIGRS-----RSCDLVLSDPS--ISRFHAELRLEQNGINVIDNNSANGTFINGKR-IKGKTYILKNGDIIVFGKCSFL 93

                 .
gi 255918178 429 F 429
Cdd:cd22683   94 I 94
FHA_FOXK1 cd22722
forkhead associated (FHA) domain found in forkhead box protein K1 (FOXK1) and similar proteins; ...
331-403 1.65e-03

forkhead associated (FHA) domain found in forkhead box protein K1 (FOXK1) and similar proteins; FOXK1, also called myocyte nuclear factor (MNF), acts as a transcriptional regulator that binds to the upstream enhancer region (CCAC box) of the myoglobin gene. It positively regulates Wnt/beta-catenin signaling by translocating DVL into the nucleus. It also reduces virus replication, probably by binding the interferon stimulated response element (ISRE) to promote antiviral gene expression. In addition, FOXK1 plays important roles in multiple human cancers. The FHA domain is a small phosphopeptide recognition module.


Pssm-ID: 438774  Cd Length: 103  Bit Score: 37.95  E-value: 1.65e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 255918178 331 QTLAVLRGRMVRYLMRSREITLGRATKDNQIDVDLsleGPAWKISRKQGVIKLKNNgDFFIANEGRRPIYIDG 403
Cdd:cd22722    2 PALARLEGRDFEFLMRQPTVTIGRNSSQGSVDVNM---GHSSFISRRHLQLSFQEP-HFYLRCLGKNGVFVDG 70
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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