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Conserved domains on  [gi|270309107|ref|NP_001003948|]
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PTB-containing, cubilin and LRP1-interacting protein [Mus musculus]

Protein Classification

PTB-containing, cubilin and LRP1-interacting protein( domain architecture ID 10192180)

PTB-containing, cubilin and LRP1-interacting protein (P-CLI1) increases proliferation of preadipocytes without affecting adipocytic differentiation

Gene Symbol:  PID1
Gene Ontology:  GO:0005515|GO:0071398
PubMed:  15567406|8987385|10610414

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PTB_P-CLI1 cd13167
PTB-containing, cubilin and LRP1-interacting protein Phosphotyrosine-binding (PTB) PH-like ...
 56-194 1.78e-106

PTB-containing, cubilin and LRP1-interacting protein Phosphotyrosine-binding (PTB) PH-like fold; P-CLI1 (also called Phosphotyrosine interaction domain-containing protein 1) increases proliferation of preadipocytes without affecting adipocytic differentiation. It forms a complex with PID1/PCLI1, LRP1 and CUBNI. It is found in subcutaneous fat, heart, skeletal muscle, brain, colon, thymus, spleen, kidney, liver, small intestine, placenta, lung and peripheral blood leukocyte. P-CLI1 contains a single PTB domain. PTB domains have a common PH-like fold and are found in various eukaryotic signaling molecules. This domain was initially shown to binds peptides with a NPXY motif with differing requirements for phosphorylation of the tyrosine, although more recent studies have found that some types of PTB domains can bind to peptides lack tyrosine residues altogether. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. PTB domains are classified into three groups: phosphotyrosine-dependent Shc-like, phosphotyrosine-dependent IRS-like, and phosphotyrosine-independent Dab-like PTB domains.


:

Pssm-ID: 269988  Cd Length: 139  Bit Score: 302.29  E-value: 1.78e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270309107  56 SGCKVTYLGKVSTTGMQFLSGCTEKPVIELWKKHTLAREDVFPANALLEIRPFQVWLHHLDHKGEATVHMDTFQVARIAY 135
Cdd:cd13167    1 TGYKVTYLGKVSTTGTQFLSGCTESPVIELWKKHTLAREDIFPSNALLEIRPFQVRLHHLDLRGEATVHMDTFQVARIAY 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 270309107 136 CTADHNVSPNIFAWVYREINDDLSYQMDCHAVQCESKLEAKKLAHAMMEAFKKTFHSMK 194
Cdd:cd13167   81 CTADHNISPNIFAWVYREINDDLSFQMDCHAVECESKLEAKKLAHAMMEAFKKTFHSMR 139
 
Name Accession Description Interval E-value
PTB_P-CLI1 cd13167
PTB-containing, cubilin and LRP1-interacting protein Phosphotyrosine-binding (PTB) PH-like ...
 56-194 1.78e-106

PTB-containing, cubilin and LRP1-interacting protein Phosphotyrosine-binding (PTB) PH-like fold; P-CLI1 (also called Phosphotyrosine interaction domain-containing protein 1) increases proliferation of preadipocytes without affecting adipocytic differentiation. It forms a complex with PID1/PCLI1, LRP1 and CUBNI. It is found in subcutaneous fat, heart, skeletal muscle, brain, colon, thymus, spleen, kidney, liver, small intestine, placenta, lung and peripheral blood leukocyte. P-CLI1 contains a single PTB domain. PTB domains have a common PH-like fold and are found in various eukaryotic signaling molecules. This domain was initially shown to binds peptides with a NPXY motif with differing requirements for phosphorylation of the tyrosine, although more recent studies have found that some types of PTB domains can bind to peptides lack tyrosine residues altogether. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. PTB domains are classified into three groups: phosphotyrosine-dependent Shc-like, phosphotyrosine-dependent IRS-like, and phosphotyrosine-independent Dab-like PTB domains.


Pssm-ID: 269988  Cd Length: 139  Bit Score: 302.29  E-value: 1.78e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270309107  56 SGCKVTYLGKVSTTGMQFLSGCTEKPVIELWKKHTLAREDVFPANALLEIRPFQVWLHHLDHKGEATVHMDTFQVARIAY 135
Cdd:cd13167    1 TGYKVTYLGKVSTTGTQFLSGCTESPVIELWKKHTLAREDIFPSNALLEIRPFQVRLHHLDLRGEATVHMDTFQVARIAY 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 270309107 136 CTADHNVSPNIFAWVYREINDDLSYQMDCHAVQCESKLEAKKLAHAMMEAFKKTFHSMK 194
Cdd:cd13167   81 CTADHNISPNIFAWVYREINDDLSFQMDCHAVECESKLEAKKLAHAMMEAFKKTFHSMR 139
PID_2 pfam14719
Phosphotyrosine interaction domain (PTB/PID);
59-201 2.00e-16

Phosphotyrosine interaction domain (PTB/PID);


Pssm-ID: 405418  Cd Length: 184  Bit Score: 74.04  E-value: 2.00e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270309107   59 KVTYLGKVsTTGMQFLSGCTEKPVIELWKKHTLAREDVfpaNALLEIRPFQVWLHHLDHKGEAtvhmdtFQVARIAYCTA 138
Cdd:pfam14719   3 KVVYLGNV-LTIHAKGEGCTDKPLGTIWKNYCQGKSGT---KMKLTVTRSGLKATTKEHGLTE------YWSHRITYCSA 72

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 270309107  139 DHNVsPNIFAWVYREINDDLSYQMDCHAVQCESKLEAKKLAHAMMEAFKKTFHSMKSDGRIHR 201
Cdd:pfam14719  73 PPNY-PRVFCWVYRHEGRKLKVELRCHAVLCKKEEKARAMALLLYQTLRAALQEFKREKLCAR 134
PTB smart00462
Phosphotyrosine-binding domain, phosphotyrosine-interaction (PI) domain; PTB/PI domain ...
 58-191 5.72e-08

Phosphotyrosine-binding domain, phosphotyrosine-interaction (PI) domain; PTB/PI domain structure similar to those of pleckstrin homology (PH) and IRS-1-like PTB domains.


Pssm-ID: 214675  Cd Length: 134  Bit Score: 50.00  E-value: 5.72e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270309107    58 CKVTYLGKVST---TGMQFLSGCTEKpvieLWKKHTLAREDvfPANALLEIRPFQVWLHHLDHKGEATvhmdTFQVARIA 134
Cdd:smart00462   6 FRVKYLGSVEVpeaRGLQVVQEAIRK----LRAAQGSEKKE--PQKVILSISSRGVKLIDEDTKAVLH----EHPLRRIS 75

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 270309107   135 YCTADHNvSPNIFAWVYREINDDlsyQMDCHAVQCESklEAKKLAHAMMEAFKKTFH 191
Cdd:smart00462  76 FCAVGPD-DLDVFGYIARDPGSS---RFACHVFRCEK--AAEDIALAIGQAFQLAYE 126
 
Name Accession Description Interval E-value
PTB_P-CLI1 cd13167
PTB-containing, cubilin and LRP1-interacting protein Phosphotyrosine-binding (PTB) PH-like ...
 56-194 1.78e-106

PTB-containing, cubilin and LRP1-interacting protein Phosphotyrosine-binding (PTB) PH-like fold; P-CLI1 (also called Phosphotyrosine interaction domain-containing protein 1) increases proliferation of preadipocytes without affecting adipocytic differentiation. It forms a complex with PID1/PCLI1, LRP1 and CUBNI. It is found in subcutaneous fat, heart, skeletal muscle, brain, colon, thymus, spleen, kidney, liver, small intestine, placenta, lung and peripheral blood leukocyte. P-CLI1 contains a single PTB domain. PTB domains have a common PH-like fold and are found in various eukaryotic signaling molecules. This domain was initially shown to binds peptides with a NPXY motif with differing requirements for phosphorylation of the tyrosine, although more recent studies have found that some types of PTB domains can bind to peptides lack tyrosine residues altogether. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. PTB domains are classified into three groups: phosphotyrosine-dependent Shc-like, phosphotyrosine-dependent IRS-like, and phosphotyrosine-independent Dab-like PTB domains.


Pssm-ID: 269988  Cd Length: 139  Bit Score: 302.29  E-value: 1.78e-106
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270309107  56 SGCKVTYLGKVSTTGMQFLSGCTEKPVIELWKKHTLAREDVFPANALLEIRPFQVWLHHLDHKGEATVHMDTFQVARIAY 135
Cdd:cd13167    1 TGYKVTYLGKVSTTGTQFLSGCTESPVIELWKKHTLAREDIFPSNALLEIRPFQVRLHHLDLRGEATVHMDTFQVARIAY 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 270309107 136 CTADHNVSPNIFAWVYREINDDLSYQMDCHAVQCESKLEAKKLAHAMMEAFKKTFHSMK 194
Cdd:cd13167   81 CTADHNISPNIFAWVYREINDDLSFQMDCHAVECESKLEAKKLAHAMMEAFKKTFHSMR 139
PTB cd00934
Phosphotyrosine-binding (PTB) PH-like fold; PTB domains have a common PH-like fold and are ...
 56-186 5.28e-26

Phosphotyrosine-binding (PTB) PH-like fold; PTB domains have a common PH-like fold and are found in various eukaryotic signaling molecules. This domain was initially shown to bind peptides with a NPXY motif with differing requirements for phosphorylation of the tyrosine, although more recent studies have found that some types of PTB domains can bind to peptides lack tyrosine residues altogether. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. PTB domains are classified into three groups: phosphotyrosine-dependent Shc-like, phosphotyrosine-dependent IRS-like, and phosphotyrosine-independent Dab-like PTB domains.


Pssm-ID: 269911  Cd Length: 120  Bit Score: 97.19  E-value: 5.28e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270309107  56 SGCKVTYLGKVSTTGMQFLSGCTEkpvIELWKKHTLAREDVFPANALLEIRPFQVWLHHLDHKgeatVHMDTFQVARIAY 135
Cdd:cd00934    1 ASFQVKYLGSVEVGSSRGVDVVEE---ALKALAAALKSSKRKPGPVLLEVSSKGVKLLDLDTK----ELLLRHPLHRISY 73

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 270309107 136 CTADHNvSPNIFAWVYREINddlSYQMDCHAVQCESKLEAKKLAHAMMEAF 186
Cdd:cd00934   74 CGRDPD-NPNVFAFIAGEEG---GSGFRCHVFQCEDEEEAEEILQAIGQAF 120
PID_2 pfam14719
Phosphotyrosine interaction domain (PTB/PID);
59-201 2.00e-16

Phosphotyrosine interaction domain (PTB/PID);


Pssm-ID: 405418  Cd Length: 184  Bit Score: 74.04  E-value: 2.00e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270309107   59 KVTYLGKVsTTGMQFLSGCTEKPVIELWKKHTLAREDVfpaNALLEIRPFQVWLHHLDHKGEAtvhmdtFQVARIAYCTA 138
Cdd:pfam14719   3 KVVYLGNV-LTIHAKGEGCTDKPLGTIWKNYCQGKSGT---KMKLTVTRSGLKATTKEHGLTE------YWSHRITYCSA 72

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 270309107  139 DHNVsPNIFAWVYREINDDLSYQMDCHAVQCESKLEAKKLAHAMMEAFKKTFHSMKSDGRIHR 201
Cdd:pfam14719  73 PPNY-PRVFCWVYRHEGRKLKVELRCHAVLCKKEEKARAMALLLYQTLRAALQEFKREKLCAR 134
PTB_FAM43A cd01214
Family with sequence similarity 43, member A (FAM43A) Phosphotyrosine-binding (PTB) domain; ...
 59-179 2.10e-13

Family with sequence similarity 43, member A (FAM43A) Phosphotyrosine-binding (PTB) domain; The function of FAM43A is currently unknown. Human FAM43A is located on chromosome 3 at location 3q29. It encodes a 3182 base pair mRNA which possesses one Pleckstrin homology-like domain. The mRNA translates into LOC131583, a hydrophilic protein that is predicted to localize in the nucleus. The FAM43A gene is conserved through a broad range of vertebrates. It is highly conserved from chimpanzees to zebrafish. PTB domains have a common PH-like fold and are found in various eukaryotic signaling molecules. This domain was initially shown to binds peptides with a NPXY motif with differing requirements for phosphorylation of the tyrosine, although more recent studies have found that some types of PTB domains can bind to peptides lack tyrosine residues altogether. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. PTB domains are classified into three groups: phosphotyrosine-dependent Shc-like, phosphotyrosine-dependent IRS-like, and phosphotyrosine-independent Dab-like PTB domains.


Pssm-ID: 269925  Cd Length: 125  Bit Score: 64.23  E-value: 2.10e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270309107  59 KVTYLGKVsTTGMQFLSGCTEKPVIELWKKHTLAREDVFPANalLEIRPFQVWLHHLDHKG-EATVHmdtfqvaRIAYCT 137
Cdd:cd01214    9 TVVYLGNV-LTIWAKGEGCTDKPLATIWRNYTQGKKPDVKMK--LTVTPSGLKATTKQHGLtEYWLH-------RITYCS 78

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|..
gi 270309107 138 ADHNVsPNIFAWVYREINDDLSYQMDCHAVQCESKLEAKKLA 179
Cdd:cd01214   79 APPNY-PRVFCWIYRHEGRKLKVELRCHAVLCSKESKARAIA 119
PTB smart00462
Phosphotyrosine-binding domain, phosphotyrosine-interaction (PI) domain; PTB/PI domain ...
 58-191 5.72e-08

Phosphotyrosine-binding domain, phosphotyrosine-interaction (PI) domain; PTB/PI domain structure similar to those of pleckstrin homology (PH) and IRS-1-like PTB domains.


Pssm-ID: 214675  Cd Length: 134  Bit Score: 50.00  E-value: 5.72e-08
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270309107    58 CKVTYLGKVST---TGMQFLSGCTEKpvieLWKKHTLAREDvfPANALLEIRPFQVWLHHLDHKGEATvhmdTFQVARIA 134
Cdd:smart00462   6 FRVKYLGSVEVpeaRGLQVVQEAIRK----LRAAQGSEKKE--PQKVILSISSRGVKLIDEDTKAVLH----EHPLRRIS 75

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*..
gi 270309107   135 YCTADHNvSPNIFAWVYREINDDlsyQMDCHAVQCESklEAKKLAHAMMEAFKKTFH 191
Cdd:smart00462  76 FCAVGPD-DLDVFGYIARDPGSS---RFACHVFRCEK--AAEDIALAIGQAFQLAYE 126
PTB_LDLRAP_insect-like cd13160
Low Density Lipoprotein Receptor Adaptor Protein 1 (LDLRAP1) in insects and similar proteins ...
 59-186 3.31e-05

Low Density Lipoprotein Receptor Adaptor Protein 1 (LDLRAP1) in insects and similar proteins Phosphotyrosine-binding (PTB) PH-like fold; The null mutations in the LDL receptor adaptor protein 1 (LDLRAP1) gene, which serves as an adaptor for LDLR endocytosis in the liver, causes autosomal recessive hypercholesterolemia (ARH). LDLRAP1 contains a single PTB domain. PTB domains have a common PH-like fold and are found in various eukaryotic signaling molecules. This domain was initially shown to binds peptides with a NPXY motif with differing requirements for phosphorylation of the tyrosine, although more recent studies have found that some types of PTB domains can bind to peptides lack tyrosine residues altogether. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. PTB domains are classified into three groups: phosphotyrosine-dependent Shc-like, phosphotyrosine-dependent IRS-like, and phosphotyrosine-independent Dab-like PTB domains. This cd contains insects, ticks, sea urchins, and nematodes.


Pssm-ID: 269982  Cd Length: 125  Bit Score: 41.94  E-value: 3.31e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 270309107  59 KVTYLGKVSTTGMqFLSGCTEKPVIELWKKhtLAREDVFPaNALLEIRPFQVWLHHLDHKGEATVHMdTFQVARIAYCTA 138
Cdd:cd13160    4 TVKYLGRMPARGL-WGIKHTRKPLVDALKN--LPKGKTLP-KTKLEVSSDGVKLEELRGGFGSSKTV-FFPIHTISYGVQ 78

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 270309107 139 DhNVSPNIFAWVYREINDDLSYQMDCHAVQCESKLEAKKLAHAMMEAF 186
Cdd:cd13160   79 D-LVHTRVFSMIVVGEQDSSNHPFECHAFVCDSRADARNLTYWLAKAF 125
PTB_LDLRAP-mammal-like cd13159
Low Density Lipoprotein Receptor Adaptor Protein 1 (LDLRAP1) in mammals and similar proteins ...
 132-187 1.76e-04

Low Density Lipoprotein Receptor Adaptor Protein 1 (LDLRAP1) in mammals and similar proteins Phosphotyrosine-binding (PTB) PH-like fold; The null mutations in the LDL receptor adaptor protein 1 (LDLRAP1) gene, which serves as an adaptor for LDLR endocytosis in the liver, causes autosomal recessive hypercholesterolemia (ARH). LDLRAP1 contains a single PTB domain. PTB domains have a common PH-like fold and are found in various eukaryotic signaling molecules. This domain was initially shown to binds peptides with a NPXY motif with differing requirements for phosphorylation of the tyrosine, although more recent studies have found that some types of PTB domains can bind to peptides lack tyrosine residues altogether. In contrast to SH2 domains, which recognize phosphotyrosine and adjacent carboxy-terminal residues, PTB-domain binding specificity is conferred by residues amino-terminal to the phosphotyrosine. PTB domains are classified into three groups: phosphotyrosine-dependent Shc-like, phosphotyrosine-dependent IRS-like, and phosphotyrosine-independent Dab-like PTB domains. This cd contains mammals, insects, and sponges.


Pssm-ID: 269981  Cd Length: 123  Bit Score: 40.01  E-value: 1.76e-04
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 270309107 132 RIAYCTADHNvSPNIFAWVYREindDLSYQMDCHAVQCESKLEAKKLAHAMMEAFK 187
Cdd:cd13159   72 RISYCTADAN-HDKVFAFIATN---QDNEKLECHAFLCAKRKMAQAVTLTVAQAFN 123
PID pfam00640
Phosphotyrosine interaction domain (PTB/PID);
125-186 2.21e-03

Phosphotyrosine interaction domain (PTB/PID);


Pssm-ID: 395515  Cd Length: 133  Bit Score: 36.96  E-value: 2.21e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 270309107  125 MDTFQVARIAYCTADHNVSPNIFAWVYReinDDLSYQMDCHAVQCESKleAKKLAHAMMEAF 186
Cdd:pfam00640  74 IHDHPLVSISFCADGDPDLMRYFAYIAR---DKATNKFACHVFESEDG--AQDIAQSIGQAF 130
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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