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Conserved domains on  [gi|1039728994|ref|XP_017176291|]
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protein FEV isoform X1 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Ets super family cl02599
Ets-domain;
1-36 3.28e-20

Ets-domain;


The actual alignment was detected with superfamily member smart00413:

Pssm-ID: 470627  Cd Length: 87  Bit Score: 78.85  E-value: 3.28e-20
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 1039728994    1 MNYDKLSRALRYYYDKNIMSKVHGKRYAYRFDFQGL 36
Cdd:smart00413  52 MNYEKLSRALRYYYKKNILEKVPGKRLVYKFVKNPL 87
 
Name Accession Description Interval E-value
ETS smart00413
erythroblast transformation specific domain; variation of the helix-turn-helix motif
 1-36 3.28e-20

erythroblast transformation specific domain; variation of the helix-turn-helix motif


Pssm-ID: 197710  Cd Length: 87  Bit Score: 78.85  E-value: 3.28e-20
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 1039728994    1 MNYDKLSRALRYYYDKNIMSKVHGKRYAYRFDFQGL 36
Cdd:smart00413  52 MNYEKLSRALRYYYKKNILEKVPGKRLVYKFVKNPL 87
Ets pfam00178
Ets-domain;
1-31 1.15e-18

Ets-domain;


Pssm-ID: 459700  Cd Length: 80  Bit Score: 74.84  E-value: 1.15e-18
                          10        20        30
                  ....*....|....*....|....*....|.
gi 1039728994   1 MNYDKLSRALRYYYDKNIMSKVHGKRYAYRF 31
Cdd:pfam00178  50 MTYEKLSRALRYYYKKGILEKVPGKRLTYRF 80
 
Name Accession Description Interval E-value
ETS smart00413
erythroblast transformation specific domain; variation of the helix-turn-helix motif
 1-36 3.28e-20

erythroblast transformation specific domain; variation of the helix-turn-helix motif


Pssm-ID: 197710  Cd Length: 87  Bit Score: 78.85  E-value: 3.28e-20
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 1039728994    1 MNYDKLSRALRYYYDKNIMSKVHGKRYAYRFDFQGL 36
Cdd:smart00413  52 MNYEKLSRALRYYYKKNILEKVPGKRLVYKFVKNPL 87
Ets pfam00178
Ets-domain;
1-31 1.15e-18

Ets-domain;


Pssm-ID: 459700  Cd Length: 80  Bit Score: 74.84  E-value: 1.15e-18
                          10        20        30
                  ....*....|....*....|....*....|.
gi 1039728994   1 MNYDKLSRALRYYYDKNIMSKVHGKRYAYRF 31
Cdd:pfam00178  50 MTYEKLSRALRYYYKKGILEKVPGKRLTYRF 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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