|
Name |
Accession |
Description |
Interval |
E-value |
| WD40 |
COG2319 |
WD40 repeat [General function prediction only]; |
4-294 |
9.32e-47 |
|
WD40 repeat [General function prediction only];
Pssm-ID: 441893 [Multi-domain] Cd Length: 403 Bit Score: 163.54 E-value: 9.32e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 4 RQTPLTCSGHTRPVVDLAFSgitPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVW-------GATLnkdatkaAT 76
Cdd:COG2319 110 GLLLRTLTGHTGAVRSVAFS---PDGKTLASGSADGTVRLWDLATGKLLRTLTGHSGAVTsvafspdGKLL-------AS 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 77 AAADFTAKVWDAVSGDELMTL-AHKHIVKTVDFTQDSNYLLTGGQDKLLRIYDLNKPEaEPKEISGHTSGIKKALWCSDD 155
Cdd:COG2319 180 GSDDGTVRLWDLATGKLLRTLtGHTGAVRSVAFSPDGKLLASGSADGTVRLWDLATGK-LLRTLTGHSGSVRSVAFSPDG 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 156 KQILSA-DDKTVRLWDHATMTEVKSLN-FNMSVSSMEYIPEGEILVIT-YGRSIAFHSAVSLEPIKSFEAP-ATINSASL 231
Cdd:COG2319 259 RLLASGsADGTVRLWDLATGELLRTLTgHSGGVNSVAFSPDGKLLASGsDDGTVRLWDLATGKLLRTLTGHtGAVRSVAF 338
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 160707896 232 HPEKEFLVAGGEDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLWQT 294
Cdd:COG2319 339 SPDGKTLASGSDDGTVRLWDLATGELLRTLTGHTGAVTSVAFSPDGRTLASGSADGTVRLWDL 401
|
|
| WD40 |
cd00200 |
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions ... |
9-293 |
6.91e-44 |
|
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.
Pssm-ID: 238121 [Multi-domain] Cd Length: 289 Bit Score: 152.87 E-value: 6.91e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 9 TCSGHTRPVVDLAFSGITPYgyfLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKAATAAADFTAKVWDA 88
Cdd:cd00200 4 TLKGHTGGVTCVAFSPDGKL---LATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 89 VSGDELMTLA-HKHIVKTVDFTQDSNYLLTGGQDKLLRIYDLNKPEAEpKEISGHTSGIKKALWCSDDKQILSA-DDKTV 166
Cdd:cd00200 81 ETGECVRTLTgHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCL-TTLRGHTDWVNSVAFSPDGTFVASSsQDGTI 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 167 RLWDHATMTEVKSLN-FNMSVSSMEYIPEGEILVITYG-RSIAFHSAVSLEPIKSFEA-PATINSASLHPEKEFLVAGGE 243
Cdd:cd00200 160 KLWDLRTGKCVATLTgHTGEVNSVAFSPDGEKLLSSSSdGTIKLWDLSTGKCLGTLRGhENGVNSVAFSPDGYLLASGSE 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 160707896 244 DFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLWQ 293
Cdd:cd00200 240 DGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289
|
|
| WD40 |
smart00320 |
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats ... |
254-292 |
2.47e-10 |
|
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Pssm-ID: 197651 [Multi-domain] Cd Length: 40 Bit Score: 55.01 E-value: 2.47e-10
10 20 30
....*....|....*....|....*....|....*....
gi 160707896 254 SGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLW 292
Cdd:smart00320 1 SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLW 39
|
|
| WD40 |
pfam00400 |
WD domain, G-beta repeat; |
255-292 |
2.12e-09 |
|
WD domain, G-beta repeat;
Pssm-ID: 459801 [Multi-domain] Cd Length: 39 Bit Score: 52.35 E-value: 2.12e-09
10 20 30
....*....|....*....|....*....|....*...
gi 160707896 255 GEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLW 292
Cdd:pfam00400 1 GKLLKTLEGHTGSVTSLAFSPDGKLLASGSDDGTVKVW 38
|
|
| PLN00181 |
PLN00181 |
protein SPA1-RELATED; Provisional |
97-292 |
8.68e-05 |
|
protein SPA1-RELATED; Provisional
Pssm-ID: 177776 [Multi-domain] Cd Length: 793 Bit Score: 44.31 E-value: 8.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 97 LAHKHIVKTVDFTQDSNYLLTGGQDKLLRIYDLNKPEAEPKEIS------GHTSGIKKALWCSDDK-QILSAD-DKTVRL 168
Cdd:PLN00181 480 LNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHypvvelASRSKLSGICWNSYIKsQVASSNfEGVVQV 559
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 169 WDHAT---MTEVKSlnFNMSVSSMEYIPEGEILVIT-----YGRSIAFHSAVSLEPIKSfeaPATINSASLHPEK-EFLV 239
Cdd:PLN00181 560 WDVARsqlVTEMKE--HEKRVWSIDYSSADPTLLASgsddgSVKLWSINQGVSIGTIKT---KANICCVQFPSESgRSLA 634
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 160707896 240 AGGEDFKLYKYDY-NSGEELESYKGHFGPIHCVRFSpDGELYASGSEDGTLRLW 292
Cdd:PLN00181 635 FGSADHKVYYYDLrNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLW 687
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| WD40 |
COG2319 |
WD40 repeat [General function prediction only]; |
4-294 |
9.32e-47 |
|
WD40 repeat [General function prediction only];
Pssm-ID: 441893 [Multi-domain] Cd Length: 403 Bit Score: 163.54 E-value: 9.32e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 4 RQTPLTCSGHTRPVVDLAFSgitPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVW-------GATLnkdatkaAT 76
Cdd:COG2319 110 GLLLRTLTGHTGAVRSVAFS---PDGKTLASGSADGTVRLWDLATGKLLRTLTGHSGAVTsvafspdGKLL-------AS 179
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 77 AAADFTAKVWDAVSGDELMTL-AHKHIVKTVDFTQDSNYLLTGGQDKLLRIYDLNKPEaEPKEISGHTSGIKKALWCSDD 155
Cdd:COG2319 180 GSDDGTVRLWDLATGKLLRTLtGHTGAVRSVAFSPDGKLLASGSADGTVRLWDLATGK-LLRTLTGHSGSVRSVAFSPDG 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 156 KQILSA-DDKTVRLWDHATMTEVKSLN-FNMSVSSMEYIPEGEILVIT-YGRSIAFHSAVSLEPIKSFEAP-ATINSASL 231
Cdd:COG2319 259 RLLASGsADGTVRLWDLATGELLRTLTgHSGGVNSVAFSPDGKLLASGsDDGTVRLWDLATGKLLRTLTGHtGAVRSVAF 338
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 160707896 232 HPEKEFLVAGGEDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLWQT 294
Cdd:COG2319 339 SPDGKTLASGSDDGTVRLWDLATGELLRTLTGHTGAVTSVAFSPDGRTLASGSADGTVRLWDL 401
|
|
| WD40 |
COG2319 |
WD40 repeat [General function prediction only]; |
4-298 |
3.18e-46 |
|
WD40 repeat [General function prediction only];
Pssm-ID: 441893 [Multi-domain] Cd Length: 403 Bit Score: 162.00 E-value: 3.18e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 4 RQTPLTCSGHTRPVVDLAFSgitPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKAATAAADFTA 83
Cdd:COG2319 68 GALLATLLGHTAAVLSVAFS---PDGRLLASASADGTVRLWDLATGLLLRTLTGHTGAVRSVAFSPDGKTLASGSADGTV 144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 84 KVWDAVSGDELMTL-AHKHIVKTVDFTQDSNYLLTGGQDKLLRIYDLNKPEaEPKEISGHTSGIKKALWCSDDKQILSA- 161
Cdd:COG2319 145 RLWDLATGKLLRTLtGHSGAVTSVAFSPDGKLLASGSDDGTVRLWDLATGK-LLRTLTGHTGAVRSVAFSPDGKLLASGs 223
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 162 DDKTVRLWDHATMTEVKSLNF-NMSVSSMEYIPEGEILVIT-YGRSIAFHSAVSLEPIKSFEAP-ATINSASLHPEKEFL 238
Cdd:COG2319 224 ADGTVRLWDLATGKLLRTLTGhSGSVRSVAFSPDGRLLASGsADGTVRLWDLATGELLRTLTGHsGGVNSVAFSPDGKLL 303
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 239 VAGGEDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLWQTVVGK 298
Cdd:COG2319 304 ASGSDDGTVRLWDLATGKLLRTLTGHTGAVRSVAFSPDGKTLASGSDDGTVRLWDLATGE 363
|
|
| WD40 |
COG2319 |
WD40 repeat [General function prediction only]; |
4-299 |
3.60e-44 |
|
WD40 repeat [General function prediction only];
Pssm-ID: 441893 [Multi-domain] Cd Length: 403 Bit Score: 156.61 E-value: 3.60e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 4 RQTPLTCSGHTRPVVDLAFSgitPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKAATAAADFTA 83
Cdd:COG2319 26 GALLLLLLGLAAAVASLAAS---PDGARLAAGAGDLTLLLLDAAAGALLATLLGHTAAVLSVAFSPDGRLLASASADGTV 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 84 KVWDAVSGDELMTL-AHKHIVKTVDFTQDSNYLLTGGQDKLLRIYDLNKPEaEPKEISGHTSGIKKALWCSDDKQILSA- 161
Cdd:COG2319 103 RLWDLATGLLLRTLtGHTGAVRSVAFSPDGKTLASGSADGTVRLWDLATGK-LLRTLTGHSGAVTSVAFSPDGKLLASGs 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 162 DDKTVRLWDHATMTEVKSLN-FNMSVSSMEYIPEGEILVI-TYGRSIAFHSAVSLEPIKSFEAP-ATINSASLHPEKEFL 238
Cdd:COG2319 182 DDGTVRLWDLATGKLLRTLTgHTGAVRSVAFSPDGKLLASgSADGTVRLWDLATGKLLRTLTGHsGSVRSVAFSPDGRLL 261
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 160707896 239 VAGGEDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLWQTVVGKT 299
Cdd:COG2319 262 ASGSADGTVRLWDLATGELLRTLTGHSGGVNSVAFSPDGKLLASGSDDGTVRLWDLATGKL 322
|
|
| WD40 |
cd00200 |
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions ... |
9-293 |
6.91e-44 |
|
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.
Pssm-ID: 238121 [Multi-domain] Cd Length: 289 Bit Score: 152.87 E-value: 6.91e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 9 TCSGHTRPVVDLAFSGITPYgyfLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKAATAAADFTAKVWDA 88
Cdd:cd00200 4 TLKGHTGGVTCVAFSPDGKL---LATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 89 VSGDELMTLA-HKHIVKTVDFTQDSNYLLTGGQDKLLRIYDLNKPEAEpKEISGHTSGIKKALWCSDDKQILSA-DDKTV 166
Cdd:cd00200 81 ETGECVRTLTgHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCL-TTLRGHTDWVNSVAFSPDGTFVASSsQDGTI 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 167 RLWDHATMTEVKSLN-FNMSVSSMEYIPEGEILVITYG-RSIAFHSAVSLEPIKSFEA-PATINSASLHPEKEFLVAGGE 243
Cdd:cd00200 160 KLWDLRTGKCVATLTgHTGEVNSVAFSPDGEKLLSSSSdGTIKLWDLSTGKCLGTLRGhENGVNSVAFSPDGYLLASGSE 239
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 160707896 244 DFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLWQ 293
Cdd:cd00200 240 DGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289
|
|
| WD40 |
cd00200 |
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions ... |
99-302 |
6.45e-38 |
|
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.
Pssm-ID: 238121 [Multi-domain] Cd Length: 289 Bit Score: 137.08 E-value: 6.45e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 99 HKHIVKTVDFTQDSNYLLTGGQDKLLRIYDLNKPEAEpKEISGHTSGIKKALWCSDDKQILSA-DDKTVRLWDHATMTEV 177
Cdd:cd00200 8 HTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELL-RTLKGHTGPVRDVAASADGTYLASGsSDKTIRLWDLETGECV 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 178 KSLN-FNMSVSSMEYIPEGEILVITYG-RSIAFHSAVSLEPIKSFEA-PATINSASLHPEKEFLVAGGEDFKLYKYDYNS 254
Cdd:cd00200 87 RTLTgHTSYVSSVAFSPDGRILSSSSRdKTIKVWDVETGKCLTTLRGhTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRT 166
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 160707896 255 GEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLWQTVVGKTYGL 302
Cdd:cd00200 167 GKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGT 214
|
|
| WD40 |
COG2319 |
WD40 repeat [General function prediction only]; |
43-298 |
1.70e-29 |
|
WD40 repeat [General function prediction only];
Pssm-ID: 441893 [Multi-domain] Cd Length: 403 Bit Score: 116.93 E-value: 1.70e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 43 LRQGDTGDWIGTFLGHKGAVWGATLNKDATKAATAAADFTAKVWDAVSGDELMTL-AHKHIVKTVDFTQDSNYLLTGGQD 121
Cdd:COG2319 20 LLAAALGALLLLLLGLAAAVASLAASPDGARLAAGAGDLTLLLLDAAAGALLATLlGHTAAVLSVAFSPDGRLLASASAD 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 122 KLLRIYDLNKPEaEPKEISGHTSGIKKALWCSDDKQILSA-DDKTVRLWDHATMTEVKSLNFnmsvssmeyipegeilvi 200
Cdd:COG2319 100 GTVRLWDLATGL-LLRTLTGHTGAVRSVAFSPDGKTLASGsADGTVRLWDLATGKLLRTLTG------------------ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 201 tygrsiafHSAvslepiksfeapaTINSASLHPEKEFLVAGGEDFKLYKYDYNSGEELESYKGHFGPIHCVRFSPDGELY 280
Cdd:COG2319 161 --------HSG-------------AVTSVAFSPDGKLLASGSDDGTVRLWDLATGKLLRTLTGHTGAVRSVAFSPDGKLL 219
|
250
....*....|....*...
gi 160707896 281 ASGSEDGTLRLWQTVVGK 298
Cdd:COG2319 220 ASGSADGTVRLWDLATGK 237
|
|
| WD40 |
COG2319 |
WD40 repeat [General function prediction only]; |
4-130 |
2.28e-12 |
|
WD40 repeat [General function prediction only];
Pssm-ID: 441893 [Multi-domain] Cd Length: 403 Bit Score: 67.63 E-value: 2.28e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 4 RQTPLTCSGHTRPVVDLAFSgitPYGYFLISACKDGKPMLRQGDTGDWIGTFLGHKGAVWGATLNKDATKAATAAADFTA 83
Cdd:COG2319 278 GELLRTLTGHSGGVNSVAFS---PDGKLLASGSDDGTVRLWDLATGKLLRTLTGHTGAVRSVAFSPDGKTLASGSDDGTV 354
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 160707896 84 KVWDAVSGDELMTL-AHKHIVKTVDFTQDSNYLLTGGQDKLLRIYDLN 130
Cdd:COG2319 355 RLWDLATGELLRTLtGHTGAVTSVAFSPDGRTLASGSADGTVRLWDLA 402
|
|
| WD40 |
smart00320 |
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats ... |
254-292 |
2.47e-10 |
|
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Pssm-ID: 197651 [Multi-domain] Cd Length: 40 Bit Score: 55.01 E-value: 2.47e-10
10 20 30
....*....|....*....|....*....|....*....
gi 160707896 254 SGEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLW 292
Cdd:smart00320 1 SGELLKTLKGHTGPVTSVAFSPDGKYLASGSDDGTIKLW 39
|
|
| WD40 |
pfam00400 |
WD domain, G-beta repeat; |
255-292 |
2.12e-09 |
|
WD domain, G-beta repeat;
Pssm-ID: 459801 [Multi-domain] Cd Length: 39 Bit Score: 52.35 E-value: 2.12e-09
10 20 30
....*....|....*....|....*....|....*...
gi 160707896 255 GEELESYKGHFGPIHCVRFSPDGELYASGSEDGTLRLW 292
Cdd:pfam00400 1 GKLLKTLEGHTGSVTSLAFSPDGKLLASGSDDGTVKVW 38
|
|
| WD40 |
smart00320 |
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats ... |
90-128 |
4.50e-05 |
|
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Pssm-ID: 197651 [Multi-domain] Cd Length: 40 Bit Score: 39.99 E-value: 4.50e-05
10 20 30 40
....*....|....*....|....*....|....*....|
gi 160707896 90 SGDELMTL-AHKHIVKTVDFTQDSNYLLTGGQDKLLRIYD 128
Cdd:smart00320 1 SGELLKTLkGHTGPVTSVAFSPDGKYLASGSDDGTIKLWD 40
|
|
| PLN00181 |
PLN00181 |
protein SPA1-RELATED; Provisional |
97-292 |
8.68e-05 |
|
protein SPA1-RELATED; Provisional
Pssm-ID: 177776 [Multi-domain] Cd Length: 793 Bit Score: 44.31 E-value: 8.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 97 LAHKHIVKTVDFTQDSNYLLTGGQDKLLRIYDLNKPEAEPKEIS------GHTSGIKKALWCSDDK-QILSAD-DKTVRL 168
Cdd:PLN00181 480 LNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHypvvelASRSKLSGICWNSYIKsQVASSNfEGVVQV 559
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 160707896 169 WDHAT---MTEVKSlnFNMSVSSMEYIPEGEILVIT-----YGRSIAFHSAVSLEPIKSfeaPATINSASLHPEK-EFLV 239
Cdd:PLN00181 560 WDVARsqlVTEMKE--HEKRVWSIDYSSADPTLLASgsddgSVKLWSINQGVSIGTIKT---KANICCVQFPSESgRSLA 634
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 160707896 240 AGGEDFKLYKYDY-NSGEELESYKGHFGPIHCVRFSpDGELYASGSEDGTLRLW 292
Cdd:PLN00181 635 FGSADHKVYYYDLrNPKLPLCTMIGHSKTVSYVRFV-DSSTLVSSSTDNTLKLW 687
|
|
| WD40 |
smart00320 |
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats ... |
137-170 |
1.11e-04 |
|
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Pssm-ID: 197651 [Multi-domain] Cd Length: 40 Bit Score: 39.22 E-value: 1.11e-04
10 20 30
....*....|....*....|....*....|....*
gi 160707896 137 KEISGHTSGIKKALWCSDDKQILSA-DDKTVRLWD 170
Cdd:smart00320 6 KTLKGHTGPVTSVAFSPDGKYLASGsDDGTIKLWD 40
|
|
| WD40 |
pfam00400 |
WD domain, G-beta repeat; |
91-128 |
2.60e-04 |
|
WD domain, G-beta repeat;
Pssm-ID: 459801 [Multi-domain] Cd Length: 39 Bit Score: 38.10 E-value: 2.60e-04
10 20 30
....*....|....*....|....*....|....*....
gi 160707896 91 GDELMTL-AHKHIVKTVDFTQDSNYLLTGGQDKLLRIYD 128
Cdd:pfam00400 1 GKLLKTLeGHTGSVTSLAFSPDGKLLASGSDDGTVKVWD 39
|
|
| WD40 |
pfam00400 |
WD domain, G-beta repeat; |
137-170 |
9.44e-04 |
|
WD domain, G-beta repeat;
Pssm-ID: 459801 [Multi-domain] Cd Length: 39 Bit Score: 36.55 E-value: 9.44e-04
10 20 30
....*....|....*....|....*....|....*
gi 160707896 137 KEISGHTSGIKKALWCSDDKQILSA-DDKTVRLWD 170
Cdd:pfam00400 5 KTLEGHTGSVTSLAFSPDGKLLASGsDDGTVKVWD 39
|
|
| WD40 |
smart00320 |
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats ... |
9-40 |
7.73e-03 |
|
WD40 repeats; Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Pssm-ID: 197651 [Multi-domain] Cd Length: 40 Bit Score: 33.83 E-value: 7.73e-03
10 20 30
....*....|....*....|....*....|..
gi 160707896 9 TCSGHTRPVVDLAFSgitPYGYFLISACKDGK 40
Cdd:smart00320 7 TLKGHTGPVTSVAFS---PDGKYLASGSDDGT 35
|
|
|