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Conserved domains on  [gi|119586201|gb|EAW65797|]
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chromosome 14 open reading frame 155 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
rne super family cl35953
ribonuclease E; Reviewed
 231-379 1.08e-07

ribonuclease E; Reviewed


The actual alignment was detected with superfamily member PRK10811:

Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 55.82  E-value: 1.08e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  231 EDELREEVTVPVVQEGSAVKkVASAEIEPPSTEKFPAKIQPPLVEEATAKAEPRPAEETH--VQVQPSTEETPDAEAATA 308
Cdd:PRK10811  858 QREAEEVQVQPVVAEVPVAA-AVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETTHpeVIAAPVTEQPQVITESDV 936

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 119586201  309 VAENSVKVQPPPAEEAPLVEFPAEIQPPSAEESPsVELLAEILPPSAEESPSEEPPAEILPPPAEKSPSVE 379
Cdd:PRK10811  937 AVAQEVAEHAEPVVEPQDETADIEEAAETAEVVV-AEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQV 1006
PRK12323 super family cl46901
DNA polymerase III subunit gamma/tau;
277-484 2.46e-06

DNA polymerase III subunit gamma/tau;


The actual alignment was detected with superfamily member PRK12323:

Pssm-ID: 481241 [Multi-domain]  Cd Length: 700  Bit Score: 51.03  E-value: 2.46e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 277 ATAKAEPRPAEETHVQVQPSTEETPDAEAATAVAENSVKVQPPPAEEAPLVEFPAEIQPPSAEESPSVELLAEILPPSAe 356
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPA- 453

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 357 esPSEEPPAEILPPPAekspsvellgeirSPSAQKAPIEVQPLPAEGALEEAPAKVEPPTVEETLADV-QPLLPEEAPRE 435
Cdd:PRK12323 454 --PAAAPAAAARPAAA-------------GPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFaSPAPAQPDAAP 518

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 119586201 436 EARELQLSTAMETPAEEAPTEFQSPLPKETTAEEASAEIQLLAATEPPA 484
Cdd:PRK12323 519 AGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPR 567
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 266-742 1.32e-04

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 46.08  E-value: 1.32e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  266 PAKIQPPLVEEATAKAE---PRPAEETHVQVQPSTEETPDAEAATAVAENSVKVQ-PPPAEEAPLVEFPAEIQPPSAEES 341
Cdd:PHA03247 2551 PPPPLPPAAPPAAPDRSvppPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRgDPRGPAPPSPLPPDTHAPDPPPPS 2630

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  342 PSvellaeilpPSAEESPSEEPPAEILPPPAEKSPSVELLGEIRSPSAQKAPIEVQPLPAEGALEEAPAKVEPPTveeTL 421
Cdd:PHA03247 2631 PS---------PAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLT---SL 2698

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  422 ADVQPllpeeapreearelqlstaMETPAEEAPTEFQS--PLPKETTAEEASAEIQLLAATEPPADETPA----EARSPL 495
Cdd:PHA03247 2699 ADPPP-------------------PPPTPEPAPHALVSatPLPPGPAAARQASPALPAAPAPPAVPAGPAtpggPARPAR 2759

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  496 SEETSAEEAHAEVQSPLAEETTAEEASAEIQLLAAIEA-PADETPAEAQSPLSEETSAEEAPAEVQSPSAKGVSIEEAPL 574
Cdd:PHA03247 2760 PPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESlPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAP 2839

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  575 ELQPPSGEETTAEEASAAIQLLAATEASAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEA 654
Cdd:PHA03247 2840 PPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQP 2919

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  655 PAEVQPPPAEEAPSEVQPPPaeeapaevqslPAEETPIEETLAAVHSPPADDVPAEEASVDKHSPPADLLLTEEFPIGEA 734
Cdd:PHA03247 2920 QPQPPPPPQPQPPPPPPPRP-----------QPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREA 2988


                  ....*...
gi 119586201  735 SAEVSPPP 742
Cdd:PHA03247 2989 PASSTPPL 2996
 
Name Accession Description Interval E-value
rne PRK10811
ribonuclease E; Reviewed
 231-379 1.08e-07

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 55.82  E-value: 1.08e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  231 EDELREEVTVPVVQEGSAVKkVASAEIEPPSTEKFPAKIQPPLVEEATAKAEPRPAEETH--VQVQPSTEETPDAEAATA 308
Cdd:PRK10811  858 QREAEEVQVQPVVAEVPVAA-AVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETTHpeVIAAPVTEQPQVITESDV 936

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 119586201  309 VAENSVKVQPPPAEEAPLVEFPAEIQPPSAEESPsVELLAEILPPSAEESPSEEPPAEILPPPAEKSPSVE 379
Cdd:PRK10811  937 AVAQEVAEHAEPVVEPQDETADIEEAAETAEVVV-AEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQV 1006
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
277-484 2.46e-06

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 51.03  E-value: 2.46e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 277 ATAKAEPRPAEETHVQVQPSTEETPDAEAATAVAENSVKVQPPPAEEAPLVEFPAEIQPPSAEESPSVELLAEILPPSAe 356
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPA- 453

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 357 esPSEEPPAEILPPPAekspsvellgeirSPSAQKAPIEVQPLPAEGALEEAPAKVEPPTVEETLADV-QPLLPEEAPRE 435
Cdd:PRK12323 454 --PAAAPAAAARPAAA-------------GPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFaSPAPAQPDAAP 518

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 119586201 436 EARELQLSTAMETPAEEAPTEFQSPLPKETTAEEASAEIQLLAATEPPA 484
Cdd:PRK12323 519 AGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPR 567
PHA03247 PHA03247
large tegument protein UL36; Provisional
 266-742 1.32e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 46.08  E-value: 1.32e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  266 PAKIQPPLVEEATAKAE---PRPAEETHVQVQPSTEETPDAEAATAVAENSVKVQ-PPPAEEAPLVEFPAEIQPPSAEES 341
Cdd:PHA03247 2551 PPPPLPPAAPPAAPDRSvppPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRgDPRGPAPPSPLPPDTHAPDPPPPS 2630

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  342 PSvellaeilpPSAEESPSEEPPAEILPPPAEKSPSVELLGEIRSPSAQKAPIEVQPLPAEGALEEAPAKVEPPTveeTL 421
Cdd:PHA03247 2631 PS---------PAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLT---SL 2698

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  422 ADVQPllpeeapreearelqlstaMETPAEEAPTEFQS--PLPKETTAEEASAEIQLLAATEPPADETPA----EARSPL 495
Cdd:PHA03247 2699 ADPPP-------------------PPPTPEPAPHALVSatPLPPGPAAARQASPALPAAPAPPAVPAGPAtpggPARPAR 2759

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  496 SEETSAEEAHAEVQSPLAEETTAEEASAEIQLLAAIEA-PADETPAEAQSPLSEETSAEEAPAEVQSPSAKGVSIEEAPL 574
Cdd:PHA03247 2760 PPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESlPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAP 2839

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  575 ELQPPSGEETTAEEASAAIQLLAATEASAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEA 654
Cdd:PHA03247 2840 PPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQP 2919

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  655 PAEVQPPPAEEAPSEVQPPPaeeapaevqslPAEETPIEETLAAVHSPPADDVPAEEASVDKHSPPADLLLTEEFPIGEA 734
Cdd:PHA03247 2920 QPQPPPPPQPQPPPPPPPRP-----------QPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREA 2988


                  ....*...
gi 119586201  735 SAEVSPPP 742
Cdd:PHA03247 2989 PASSTPPL 2996
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
 443-588 6.16e-03

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 40.36  E-value: 6.16e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201   443 STAMETPAE-EAPTEFQSPLPKETTAEEASAEIQLLAATEPPADETPAEARSPLSEETSAEEAHA---------EVQSPL 512
Cdd:TIGR00927  640 HTGERTGEEgERPTEAEGENGEESGGEAEQEGETETKGENESEGEIPAERKGEQEGEGEIEAKEAdhkgeteaeEVEHEG 719

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 119586201   513 AEETTAEEASAEIQLLAAIEAPADETPAEAQSPLSEETSAEEAPAEVQSPSAKGVSIEEAPLELQPPSGEETTAEE 588
Cdd:TIGR00927  720 ETEAEGTEDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDE 795
 
Name Accession Description Interval E-value
rne PRK10811
ribonuclease E; Reviewed
 231-379 1.08e-07

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 55.82  E-value: 1.08e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  231 EDELREEVTVPVVQEGSAVKkVASAEIEPPSTEKFPAKIQPPLVEEATAKAEPRPAEETH--VQVQPSTEETPDAEAATA 308
Cdd:PRK10811  858 QREAEEVQVQPVVAEVPVAA-AVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETTHpeVIAAPVTEQPQVITESDV 936

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 119586201  309 VAENSVKVQPPPAEEAPLVEFPAEIQPPSAEESPsVELLAEILPPSAEESPSEEPPAEILPPPAEKSPSVE 379
Cdd:PRK10811  937 AVAQEVAEHAEPVVEPQDETADIEEAAETAEVVV-AEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQV 1006
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
277-484 2.46e-06

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 51.03  E-value: 2.46e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 277 ATAKAEPRPAEETHVQVQPSTEETPDAEAATAVAENSVKVQPPPAEEAPLVEFPAEIQPPSAEESPSVELLAEILPPSAe 356
Cdd:PRK12323 375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPA- 453

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 357 esPSEEPPAEILPPPAekspsvellgeirSPSAQKAPIEVQPLPAEGALEEAPAKVEPPTVEETLADV-QPLLPEEAPRE 435
Cdd:PRK12323 454 --PAAAPAAAARPAAA-------------GPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFaSPAPAQPDAAP 518

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 119586201 436 EARELQLSTAMETPAEEAPTEFQSPLPKETTAEEASAEIQLLAATEPPA 484
Cdd:PRK12323 519 AGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPR 567
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
304-504 2.92e-06

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 51.03  E-value: 2.92e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 304 EAATAVAENSVKVQPPPAEEAPLVEFPAEIQPPSAEESPSVEllAEILPPSAEESPSEEPPAEILPPPAEKSPSVELLGE 383
Cdd:PRK12323 371 GAGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAA--AAAARAVAAAPARRSPAPEALAAARQASARGPGGAP 448

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 384 IRSPSAQKAPIEVQPLPAEGALEEAPAKVEPPTVEETLADVQPLLPEEApreearelqlstametPAEEAPTEFQSPLPK 463
Cdd:PRK12323 449 APAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPP----------------PWEELPPEFASPAPA 512

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 119586201 464 ETTAEEASAEiqlLAATEPPADETPAEARSPLSEETSAEEA 504
Cdd:PRK12323 513 QPDAAPAGWV---AESIPDPATADPDDAFETLAPAPAAAPA 550
PHA03247 PHA03247
large tegument protein UL36; Provisional
 241-557 6.43e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 50.32  E-value: 6.43e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  241 PVVQEGSAVKKVASAEIEPPSTEKFPAKIQPPLVEEATAKAEPRPAEETHVQVQPSTEETPDAEAATAVAENSVKVQPPP 320
Cdd:PHA03247 2742 PAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPA 2821

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  321 AEEAPLVEFPAEIQP-----PSAEESPSVELLAEILP--PSAEESPSEEPPAEilpPPAEKSPSVELLGEirsPSAQKAP 393
Cdd:PHA03247 2822 ASPAGPLPPPTSAQPtapppPPGPPPPSLPLGGSVAPggDVRRRPPSRSPAAK---PAAPARPPVRRLAR---PAVSRST 2895

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  394 iEVQPLPAEGALEEAPAKVEPPTVEETLADVQPLLPEEAPREEARELQLSTAMETPAEEAPTEFQSPLPKETTAEEASAE 473
Cdd:PHA03247 2896 -ESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAV 2974

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  474 IQLLAATEPPADETPAEARSPLSEETSAEEAHAEVQSPLAEETTAEEASaeiqLLAAIEAPADETPAEAQSPLSEETSAE 553
Cdd:PHA03247 2975 PRFRVPQPAPSREAPASSTPPLTGHSLSRVSSWASSLALHEETDPPPVS----LKQTLWPPDDTEDSDADSLFDSDSERS 3050


                  ....
gi 119586201  554 EAPA 557
Cdd:PHA03247 3051 DLEA 3054
rne PRK10811
ribonuclease E; Reviewed
 238-409 1.57e-05

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 48.88  E-value: 1.57e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  238 VTVPVVQEGSAVKKVASAEIEPPSTEKFPAKIQPPLVEEATAKAEPRPAEETHVQVQP-STEETPDAEAATAVAENSVKV 316
Cdd:PRK10811  847 VVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPqPEEVVVVETTHPEVIAAPVTE 926

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  317 QPPP--AEEAPLVEFPAEIQPPSAEESPSVELLAEILPpsAEESPSEEPPAEILPPPAEKSPSVELLGEIRSPSAQKAPI 394
Cdd:PRK10811  927 QPQVitESDVAVAQEVAEHAEPVVEPQDETADIEEAAE--TAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPA 1004

                         170
                  ....*....|....*
gi 119586201  395 EVQPLPAEGALEEAP 409
Cdd:PRK10811 1005 QVPEATVEHNHATAP 1019
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
246-462 5.48e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 46.79  E-value: 5.48e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 246 GSAVKKVASAEIEPPSTEKFPAKIQPPLVEEATAKAEPRPAEETHVQVQPSTEETPdAEAATAVAENSVKVQPPPAEEAP 325
Cdd:PRK12323 373 GPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSP-APEALAAARQASARGPGGAPAPA 451

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 326 lvefPAEIQPPSAEESPSVELLAEILPPSAEESPSEEPPAEILPPPAEKSPSVELLGEIRSPSAqkAPIEVQPLPAEGAL 405
Cdd:PRK12323 452 ----PAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAP--AQPDAAPAGWVAES 525

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 119586201 406 EEAPAKVEPPTVEETLADVQPLLPEEAPREEARELQLSTAMETPAEEAPTEFQSPLP 462
Cdd:PRK12323 526 IPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASASGLPDMFDGDWP 582
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 248-400 1.11e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 45.86  E-value: 1.11e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 248 AVKKVASAEIEPPSTEKFPAkiqPPLVEEATAKAEPRPAeethvqvqpsteeTPDAEAATAVAENSVKVQPPPAEEAPLV 327
Cdd:PRK14951 363 AFKPAAAAEAAAPAEKKTPA---RPEAAAPAAAPVAQAA-------------AAPAPAAAPAAAASAPAAPPAAAPPAPV 426

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 119586201 328 EFPAEIQPPSAEESPSVELLAEILPPSAEESPSEEPPAEILPPPAEKSPSvellgeiRSPSAQKAPIEVQPLP 400
Cdd:PRK14951 427 AAPAAAAPAAAPAAAPAAVALAPAPPAQAAPETVAIPVRVAPEPAVASAA-------PAPAAAPAAARLTPTE 492
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
317-541 1.29e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 45.64  E-value: 1.29e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 317 QPPPAEEAPLVEFPAEIQPPSAEESPSVELLAEIlPPSAEESPSEEPPAEilpPPAEKSPSVELLGEIRSPSAQKAPIEV 396
Cdd:PRK12323 373 GPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAP-AAAPAAAAAARAVAA---APARRSPAPEALAAARQASARGPGGAP 448

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 397 QPLPAEGAleeAPAKVEPPtveetladvqpllpeeapreearelqlstAMETPAEEAPTEFQSPLPKETTAEEASAeiql 476
Cdd:PRK12323 449 APAPAPAA---APAAAARP-----------------------------AAAGPRPVAAAAAAAPARAAPAAAPAPA---- 492

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 119586201 477 lAATEPPADETPAEARSPLSEETSAEEAHAEVQSPLAEETTAEEASAEIQLLAAIEAPADETPAE 541
Cdd:PRK12323 493 -DDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAA 556
PHA03247 PHA03247
large tegument protein UL36; Provisional
 266-742 1.32e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 46.08  E-value: 1.32e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  266 PAKIQPPLVEEATAKAE---PRPAEETHVQVQPSTEETPDAEAATAVAENSVKVQ-PPPAEEAPLVEFPAEIQPPSAEES 341
Cdd:PHA03247 2551 PPPPLPPAAPPAAPDRSvppPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRgDPRGPAPPSPLPPDTHAPDPPPPS 2630

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  342 PSvellaeilpPSAEESPSEEPPAEILPPPAEKSPSVELLGEIRSPSAQKAPIEVQPLPAEGALEEAPAKVEPPTveeTL 421
Cdd:PHA03247 2631 PS---------PAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLT---SL 2698

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  422 ADVQPllpeeapreearelqlstaMETPAEEAPTEFQS--PLPKETTAEEASAEIQLLAATEPPADETPA----EARSPL 495
Cdd:PHA03247 2699 ADPPP-------------------PPPTPEPAPHALVSatPLPPGPAAARQASPALPAAPAPPAVPAGPAtpggPARPAR 2759

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  496 SEETSAEEAHAEVQSPLAEETTAEEASAEIQLLAAIEA-PADETPAEAQSPLSEETSAEEAPAEVQSPSAKGVSIEEAPL 574
Cdd:PHA03247 2760 PPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESlPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAP 2839

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  575 ELQPPSGEETTAEEASAAIQLLAATEASAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEA 654
Cdd:PHA03247 2840 PPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQP 2919

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  655 PAEVQPPPAEEAPSEVQPPPaeeapaevqslPAEETPIEETLAAVHSPPADDVPAEEASVDKHSPPADLLLTEEFPIGEA 734
Cdd:PHA03247 2920 QPQPPPPPQPQPPPPPPPRP-----------QPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREA 2988


                  ....*...
gi 119586201  735 SAEVSPPP 742
Cdd:PHA03247 2989 PASSTPPL 2996
rne PRK10811
ribonuclease E; Reviewed
 236-375 1.70e-04

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 45.42  E-value: 1.70e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  236 EEVTVPVVQEGSAVKKVASAEIEPPSTEKFPAKIQPPLVEEATA------KAEPRPAEETHVQVQPSTEETPDAEAATAV 309
Cdd:PRK10811  893 EVVEEPVVVAEPQPEEVVVVETTHPEVIAAPVTEQPQVITESDVavaqevAEHAEPVVEPQDETADIEEAAETAEVVVAE 972

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 119586201  310 AENSVKVQPPPAEEAPLVEFPAEIQPPSAEESPSVELLAEILPPSAeesPSEEPPA-EILPPPAEKS 375
Cdd:PRK10811  973 PEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEATVEHNHATA---PMTRAPApEYVPEAPRHS 1036
rne PRK10811
ribonuclease E; Reviewed
 257-415 3.38e-04

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 44.26  E-value: 3.38e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  257 IEPPSTEKFPAKIQPPLVEEATAKAE-PRPAEETHVQVQPSTEETPDAEAATAVAENSVKVQPPPAE-EAP-LVEFPAEI 333
Cdd:PRK10811  847 VVRPQDVQVEEQREAEEVQVQPVVAEvPVAAAVEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVEtTHPeVIAAPVTE 926

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  334 QPP--SAEESPSVELLAEILPPSAEESPSEEPPAEILPPPAEKSPSVELLGEIRSPSAQKAPIEVQPLPAEGALEEAPAK 411
Cdd:PRK10811  927 QPQviTESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQV 1006


                  ....
gi 119586201  412 VEPP 415
Cdd:PRK10811 1007 PEAT 1010
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 284-420 3.41e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 44.09  E-value: 3.41e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 284 RPAEEThVQVQPSTEETPDAEAATAVAENSVKVQPPPAEEAPLVEFPAEIQPPSAEESPSVELLAEiLPPSAEESPSEEP 363
Cdd:PRK07994 360 HPAAPL-PEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLA-ARQQLQRAQGATK 437

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 119586201 364 PAEILPPPAEKSPSVE-LLGEIRSPSAQKAPIEVQPLPAEGALEEAPAKVEPPTVEET 420
Cdd:PRK07994 438 AKKSEPAAASRARPVNsALERLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVA 495
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 353-525 3.53e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 44.09  E-value: 3.53e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 353 PSAEESPSEEPPAEILPPPAEKSPSVellgeiRSPSAQKAPIEVQPLPAEGALEEAPAKVEPPTVEETLADVQPLLPEEA 432
Cdd:PRK07994 361 PAAPLPEPEVPPQSAAPAASAQATAA------PTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQG 434

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 433 PREEARELQLSTAMETPAEEAPTEF--QSPLPKETTAEEASAEIQLLAATEPPADETPAEARSPLSEETSAEEAHAEVQS 510
Cdd:PRK07994 435 ATKAKKSEPAAASRARPVNSALERLasVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTPELAA 514

                        170
                 ....*....|....*
gi 119586201 511 PLAEETTAEEASAEI 525
Cdd:PRK07994 515 KLAAEAIERDPWAAL 529
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
238-450 6.69e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 43.33  E-value: 6.69e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 238 VTVPVVQEGSAVKK---VASAEIEPPSTEKFPAKIQPPLVEEATAKAEPRPAEETHVQVQPSTEETPDAEAATAVAENSV 314
Cdd:PRK12323 378 AAAPVAQPAPAAAApaaAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAA 457

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 315 KV-QPPPAEEAPLVEFPAEIQPPSAEESPSVELLAEILPPSAEESPSEepPAEILPPPAEKSPSVELLGEIRSPSAQkap 393
Cdd:PRK12323 458 PAaAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPE--FASPAPAQPDAAPAGWVAESIPDPATA--- 532

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 119586201 394 ievQPLPAEGALEEAPAKVEPPTVEetlADVQPLLPEEAPREEARELQLSTAMETPA 450
Cdd:PRK12323 533 ---DPDDAFETLAPAPAAAPAPRAA---AATEPVVAPRPPRASASGLPDMFDGDWPA 583
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 318-416 9.95e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 42.78  E-value: 9.95e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 318 PPPAEEAPLVEFPAEIQPPSAEESPSVELLAEILPPSAEESPSEePPAEILPPPAEKSPSVELLGEIRSPSAQKAPIEVQ 397
Cdd:PRK14951 373 AAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAA-PPAAAPPAPVAAPAAAAPAAAPAAAPAAVALAPAP 451

                         90
                 ....*....|....*....
gi 119586201 398 PLPAEGALEEAPAKVEPPT 416
Cdd:PRK14951 452 PAQAAPETVAIPVRVAPEP 470
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 241-511 9.96e-04

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 42.76  E-value: 9.96e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  241 PVVQEGSAVKKVASAEIEPPSTEKFPAKIQPPLVEEATAKAEPRPAEEThVQVQPS----TEETPDAEAATAVAENSVKV 316
Cdd:PRK10263  309 PLLNGAPITEPVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPPAQPT-VAWQPVpgpqTGEPVIAPAPEGYPQQSQYA 387

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  317 QPPPAEEAPLVEfPAEIQPPSAEESPSVELLAEILPPSAEESPSEEPPAEILPPPAEKSPSVELLGEI---RSPSAQKAP 393
Cdd:PRK10263  388 QPAVQYNEPLQQ-PVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQStfaPQSTYQTEQ 466

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  394 IEVQPLPAEgALEEAPAKVEPPTVEETLADVQPLLPEEAPREEARELQLSTAMETPAEEA-----PTEFQSPLPKETTAE 468
Cdd:PRK10263  467 TYQQPAAQE-PLYQQPQPVEQQPVVEPEPVVEETKPARPPLYYFEEVEEKRAREREQLAAwyqpiPEPVKEPEPIKSSLK 545

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*
gi 119586201  469 EASaeiqllAATEPPADETPAEA--RSPLSEETSAEEAHAEVQSP 511
Cdd:PRK10263  546 APS------VAAVPPVEAAAAVSplASGVKKATLATGAAATVAAP 584
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
 213-511 1.71e-03

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 41.98  E-value: 1.71e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 213 ISRTSFTQE--------TKKGPPVLLEDELREEvTVPVVQEGSAVKKVASAEIEPPSTEKFPAK--------IQPPLVEE 276
Cdd:PTZ00449 476 ISKIQFTQEikklikksKKKLAPIEEEDSDKHD-EPPEGPEASGLPPKAPGDKEGEEGEHEDSKesdepkegGKPGETKE 554

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 277 ATAKAEPRPAEETHVQVQPSTEETPDAEAATAvaensvkvQPPPAEEAPLVEFPAEIQPPSAEESPSVELLAEIlPPSAE 356
Cdd:PTZ00449 555 GEVGKKPGPAKEHKPSKIPTLSKKPEFPKDPK--------HPKDPEEPKKPKRPRSAQRPTRPKSPKLPELLDI-PKSPK 625

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 357 ESPSEEPPAEilPPPAEKSPSVELLGEIRSPSAQKAPIEVQPlPAEGALEEA-------PAKVEPPTVEETLADVQPLLP 429
Cdd:PTZ00449 626 RPESPKSPKR--PPPPQRPSSPERPEGPKIIKSPKPPKSPKP-PFDPKFKEKfyddyldAAAKSKETKTTVVLDESFESI 702

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 430 EEAPREEARELQLSTAMETPAEEaPTEFQSPL--PKETTAEEASaEIQLLAATEPPA---DETPAEARSP--LSEETSAE 502
Cdd:PTZ00449 703 LKETLPETPGTPFTTPRPLPPKL-PRDEEFPFepIGDPDAEQPD-DIEFFTPPEEERtffHETPADTPLPdiLAEEFKEE 780


                 ....*....
gi 119586201 503 EAHAEVQSP 511
Cdd:PTZ00449 781 DIHAETGEP 789
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
334-568 2.47e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 41.40  E-value: 2.47e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 334 QPPSAEESPSVELLAEILPPSAEESPSEEPPAEILPPP--AEKSPSVELLGEIRSPSAQKAPIEVQPLPAEGALEEAPAk 411
Cdd:PRK12323 373 GPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPaaAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPA- 451

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 412 vepptveetladvqpllpeeapreearelqlSTAMETPAEEAPTEFQSPLPKETTAEEASAeiqllaATEPPADETPAEA 491
Cdd:PRK12323 452 -------------------------------PAPAAAPAAAARPAAAGPRPVAAAAAAAPA------RAAPAAAPAPADD 494

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 119586201 492 RSPLSEETSAEEAHAEVQSPLAEETTAEEASAEIQLLAAIEAPADETPAEAQSPLSEETSAEEAPAEVQSPSAKGVS 568
Cdd:PRK12323 495 DPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASAS 571
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
 384-556 2.57e-03

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 41.12  E-value: 2.57e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 384 IRSPSAQKAPievQPLPAEGALEEAPAKVEPPTVEETLADvqpllpeeapreearelqlSTAMETPaeeaPTEFQSPLPK 463
Cdd:PRK13108 273 ILAPKGREAP---GALRGSEYVVDEALEREPAELAAAAVA-------------------SAASAVG----PVGPGEPNQP 326

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 464 ETTAEEASAEIQLLAATEPPADETPAEARSPLSEETSAEEAHAEVQSPLAEETTAeEASAEIQLLAAIEAPADETPAeAQ 543
Cdd:PRK13108 327 DDVAEAVKAEVAEVTDEVAAESVVQVADRDGESTPAVEETSEADIEREQPGDLAG-QAPAAHQVDAEAASAAPEEPA-AL 404

                        170
                 ....*....|...
gi 119586201 544 SPLSEETSAEEAP 556
Cdd:PRK13108 405 ASEAHDETEPEVP 417
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
 401-565 3.27e-03

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 40.73  E-value: 3.27e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 401 AEGALEEAPAKVEPPTVEETLADVQPL----LPEEAPREEARELQLSTAMETPAEEAPTEFQSPLPKETTAEEASAEIql 476
Cdd:PRK13108 292 VDEALEREPAELAAAAVASAASAVGPVgpgePNQPDDVAEAVKAEVAEVTDEVAAESVVQVADRDGESTPAVEETSEA-- 369

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 477 lAATEPPADETPAEArsPLSEETSAEEAHAEVQSPLAEETTAEEASAEiqllaaiEAPADETPAEAQSPLSEETSAEEAP 556
Cdd:PRK13108 370 -DIEREQPGDLAGQA--PAAHQVDAEAASAAPEEPAALASEAHDETEP-------EVPEKAAPIPDPAKPDELAVAGPGD 439


                 ....*....
gi 119586201 557 AEVQSPSAK 565
Cdd:PRK13108 440 DPAEPDGIR 448
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 225-563 3.51e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 41.31  E-value: 3.51e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  225 GPPVLLEDELREEVTVPVVQEGSAVKKVASAEIEPPS---TEKFPAKIQPPLVEEATAKAEPRPAEETHVQVQPSTEETP 301
Cdd:PHA03307   38 GSQGQLVSDSAELAAVTVVAGAAACDRFEPPTGPPPGpgtEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPP 117

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  302 DAEAATA------------VAENSVKVQPPPAEEAPLVEFPAEIQPPSAEESPSVELLAEILPPSAEESPSEEPPAEILP 369
Cdd:PHA03307  118 PPTPPPAspppspapdlseMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPST 197

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  370 PPAEKSPSVELLGEIRSPSAQKApievQPLPAEGALEEAPAKVEPPTVEETlADVQPLLPEEAPREEARELQLSTAMETP 449
Cdd:PHA03307  198 PPAAASPRPPRRSSPISASASSP----APAPGRSAADDAGASSSDSSSSES-SGCGWGPENECPLPRPAPITLPTRIWEA 272

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201  450 AEEAPTEFQSPLPKETTAEEASAeiqllAATEPPADETPAEARSPLSEETSAEEAHAEVQSPLAEETTAEEASAEI-QLL 528
Cdd:PHA03307  273 SGWNGPSSRPGPASSSSSPRERS-----PSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPgPSP 347

                         330       340       350
                  ....*....|....*....|....*....|....*.
gi 119586201  529 AAIEAPADETPAEAQSPLSE-ETSAEEAPAEVQSPS 563
Cdd:PHA03307  348 SRSPSPSRPPPPADPSSPRKrPRPSRAPSSPAASAG 383
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 252-410 3.90e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 40.62  E-value: 3.90e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 252 VASAEIEPPSTEKFPAKIQPPLVEEATAKAEPRPAEETHVQVQPSTEETPDAEAATAVAENSVKVQPPPAEEAPlvEFPA 331
Cdd:PRK07994 365 LPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKA--KKSE 442

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 119586201 332 EIQPPSAEESPSVELLAEILPPSAEESPSEEPPAEILPPPAEKSPSVELLGEIRsPSAQKAPIEVQPLPAEGALEEAPA 410
Cdd:PRK07994 443 PAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVAT-PKALKKALEHEKTPELAAKLAAEA 520
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 285-780 4.34e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 40.74  E-value: 4.34e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 285 PAEETHVQVQPSTEETPDAEAATAVAENSVKVQPPPAEEAPlvEFPAEIQPPSAEESPSVEllaeilPPSAEESPSEEPP 364
Cdd:PRK07764 365 PSASDDERGLLARLERLERRLGVAGGAGAPAAAAPSAAAAA--PAAAPAPAAAAPAAAAAP------APAAAPQPAPAPA 436

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 365 AEILPPPAEKSPSVELLGEIRSPSAQKApievQPLPAEGALEEAPAKVEPPTVEETLADVQPllpeeapreearelqlST 444
Cdd:PRK07764 437 PAPAPPSPAGNAPAGGAPSPPPAAAPSA----QPAPAPAAAPEPTAAPAPAPPAAPAPAAAP----------------AA 496

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 445 AMETPAEEAPTEFQSPLPKETTAEEASAEIQLLAATEPPADETPAEAR---------SPLSEETSAEEAHAEVQSPLAEE 515
Cdd:PRK07764 497 PAAPAAPAGADDAATLRERWPEILAAVPKRSRKTWAILLPEATVLGVRgdtlvlgfsTGGLARRFASPGNAEVLVTALAE 576

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 516 TTAEEASAEIQLLAAIEAPADETPAEAQSPLSEETSAEeaPAEVQSPSAKGVSIEEAPlelQPPSGEETTAEEASAAIQL 595
Cdd:PRK07764 577 ELGGDWQVEAVVGPAPGAAGGEGPPAPASSGPPEEAAR--PAAPAAPAAPAAPAPAGA---AAAPAEASAAPAPGVAAPE 651

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 596 LAATEASAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPSEVQPPPA 675
Cdd:PRK07764 652 HHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAP 731

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 676 EEAPAEVQSLPAEETPIEETLAAVHSPPADDVPAEEASvdkhsppadlllteefpiGEASAEVSPPPSEQTPEDEALVEN 755
Cdd:PRK07764 732 SPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAA------------------PAAAPPPSPPSEEEEMAEDDAPSM 793

                        490       500
                 ....*....|....*....|....*..
gi 119586201 756 VSTEFQSPQVAGIPAVK--LGSVVLEG 780
Cdd:PRK07764 794 DDEDRRDAEEVAMELLEeeLGAKKIEE 820
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
 443-588 6.16e-03

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 40.36  E-value: 6.16e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201   443 STAMETPAE-EAPTEFQSPLPKETTAEEASAEIQLLAATEPPADETPAEARSPLSEETSAEEAHA---------EVQSPL 512
Cdd:TIGR00927  640 HTGERTGEEgERPTEAEGENGEESGGEAEQEGETETKGENESEGEIPAERKGEQEGEGEIEAKEAdhkgeteaeEVEHEG 719

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 119586201   513 AEETTAEEASAEIQLLAAIEAPADETPAEAQSPLSEETSAEEAPAEVQSPSAKGVSIEEAPLELQPPSGEETTAEE 588
Cdd:TIGR00927  720 ETEAEGTEDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDE 795
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
 445-593 6.74e-03

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 39.96  E-value: 6.74e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 119586201 445 AMETPAEEAPTEFqsplpkeTTAEEASAeiqllAATEPPADetPAEARSPlseETSAEEAHAEVQSPLAEETTAEEASAE 524
Cdd:PRK13108 291 VVDEALEREPAEL-------AAAAVASA-----ASAVGPVG--PGEPNQP---DDVAEAVKAEVAEVTDEVAAESVVQVA 353

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 119586201 525 IQLLAAIEAPADETPAEAQSPLSEETSAEeAPAEVQSPSAKGVSIEEAPLELQP--PSGEETTAEEASAAI 593
Cdd:PRK13108 354 DRDGESTPAVEETSEADIEREQPGDLAGQ-APAAHQVDAEAASAAPEEPAALASeaHDETEPEVPEKAAPI 423
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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