NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|2025050031|dbj|BCM73282|]
View 

threonyl-tRNA synthetase 2, partial [Homo sapiens]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
PLN02908 super family cl31949
threonyl-tRNA synthetase
 1-40 1.71e-12

threonyl-tRNA synthetase


The actual alignment was detected with superfamily member PLN02908:

Pssm-ID: 178496 [Multi-domain]  Cd Length: 686  Bit Score: 58.63  E-value: 1.71e-12
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 2025050031   1 VFWHSSTHVLGAAAEQFLGAVLCRGPSTEY--GFYHDFFLGK 40
Cdd:PLN02908  121 TFWHSSAHILGEALELEYGCKLCIGPCTTRgeGFYYDAFYGD 162
 
Name Accession Description Interval E-value
PLN02908 PLN02908
threonyl-tRNA synthetase
 1-40 1.71e-12

threonyl-tRNA synthetase


Pssm-ID: 178496 [Multi-domain]  Cd Length: 686  Bit Score: 58.63  E-value: 1.71e-12
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 2025050031   1 VFWHSSTHVLGAAAEQFLGAVLCRGPSTEY--GFYHDFFLGK 40
Cdd:PLN02908  121 TFWHSSAHILGEALELEYGCKLCIGPCTTRgeGFYYDAFYGD 162
ThrS COG0441
Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Threonyl-tRNA ...
 1-40 8.73e-08

Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Threonyl-tRNA synthetase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases


Pssm-ID: 440210 [Multi-domain]  Cd Length: 639  Bit Score: 45.02  E-value: 8.73e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 2025050031   1 VFWHSSTHVLGAAAEQ-FLGAVLCRGPSTEYGFYHDFFLGK 40
Cdd:COG0441    70 ILRHSAAHLLAQAVKRlYPDAKLTIGPVIENGFYYDFDLER 110
 
Name Accession Description Interval E-value
PLN02908 PLN02908
threonyl-tRNA synthetase
 1-40 1.71e-12

threonyl-tRNA synthetase


Pssm-ID: 178496 [Multi-domain]  Cd Length: 686  Bit Score: 58.63  E-value: 1.71e-12
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 2025050031   1 VFWHSSTHVLGAAAEQFLGAVLCRGPSTEY--GFYHDFFLGK 40
Cdd:PLN02908  121 TFWHSSAHILGEALELEYGCKLCIGPCTTRgeGFYYDAFYGD 162
ThrS COG0441
Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Threonyl-tRNA ...
 1-40 8.73e-08

Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Threonyl-tRNA synthetase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases


Pssm-ID: 440210 [Multi-domain]  Cd Length: 639  Bit Score: 45.02  E-value: 8.73e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 2025050031   1 VFWHSSTHVLGAAAEQ-FLGAVLCRGPSTEYGFYHDFFLGK 40
Cdd:COG0441    70 ILRHSAAHLLAQAVKRlYPDAKLTIGPVIENGFYYDFDLER 110
PRK12444 PRK12444
threonyl-tRNA synthetase; Reviewed
 1-40 1.70e-04

threonyl-tRNA synthetase; Reviewed


Pssm-ID: 183530 [Multi-domain]  Cd Length: 639  Bit Score: 35.88  E-value: 1.70e-04
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|.
gi 2025050031   1 VFWHSSTHVLGAAAEQFLGAV-LCRGPSTEYGFYHDFFLGK 40
Cdd:PRK12444   74 IARHSAAHILAQAVKRLYGDVnLGVGPVIENGFYYDMDLPS 114
PLN02837 PLN02837
threonine-tRNA ligase
 4-36 6.92e-03

threonine-tRNA ligase


Pssm-ID: 215450 [Multi-domain]  Cd Length: 614  Bit Score: 31.41  E-value: 6.92e-03
                          10        20        30
                  ....*....|....*....|....*....|....
gi 2025050031   4 HSSTHVLGAAAEQ-FLGAVLCRGPSTEYGFYHDF 36
Cdd:PLN02837   48 HTCAHVMAMAVQKlFPDAKVTIGPWIENGFYYDF 81
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH