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Conserved domains on  [gi|158261825|dbj|BAF83090|]
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unnamed protein product [Homo sapiens]

Protein Classification

GPS and 7tmB2_EMR domain-containing protein( domain architecture ID 11507200)

protein containing domains EGF_CA, GPS, and 7tmB2_EMR

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
7tmB2_EMR cd15439
epidermal growth factor-like module-containing mucin-like hormone receptors, member of the ...
599-864 2.00e-150

epidermal growth factor-like module-containing mucin-like hormone receptors, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4) and the leukocyte cell-surface antigen CD97, are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying number of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of EMR2, alternative splicing results in four isoforms possessing either two (EGF1,2), three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


:

Pssm-ID: 320555 [Multi-domain]  Cd Length: 263  Bit Score: 443.32  E-value: 2.00e-150
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 599 DFSLYIISHVGIIISLVCLVLAIATFLLCRSIRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNKMGCAIIAGFLHYLFLA 678
Cdd:cd15439    1 DLALTVITYVGLIISLLCLFLAILTFLLCRSIRNTSTSLHLQLSLCLFLADLLFLVGIDRTDNKVLCSIIAGFLHYLFLA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 679 CFFWMLVEAVILFLMVRNLKVVNYFSSRNIKMLHICAFGYGLPMLVVVISASVQPQGYGMHNRCWLNTETGFIWSFLGPV 758
Cdd:cd15439   81 CFAWMFLEAVHLFLTVRNLKVVNYFSSHRFKKRFMYPVGYGLPAVIVAISAAVNPQGYGTPKHCWLSMEKGFIWSFLGPV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 759 CTVIVtlqINSLLLTWTLWILRQRLSSVNAEVSTLKDTRLLTFKAFAQLFILGCSWVLGIFQIGPVAGVMAYLFTIINSL 838
Cdd:cd15439  161 CVIIV---INLVLFCLTLWILREKLSSLNAEVSTLKNTRLLTFKAIAQLFILGCTWILGLFQVGPVATVMAYLFTITNSL 237
                        250       260
                 ....*....|....*....|....*.
gi 158261825 839 QGAFIFLIHCLLNGQVREEYKRWITG 864
Cdd:cd15439  238 QGVFIFLVHCLLNRQVREEYRRWITG 263
GPS smart00303
G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin ...
546-595 1.50e-11

G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin REJ and polycystin.


:

Pssm-ID: 197639  Cd Length: 49  Bit Score: 60.09  E-value: 1.50e-11
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 158261825   546 ERPICVSWSTDVkgGRWTSFGCVILEASETYTICSCNQMANLAVIMASGE 595
Cdd:smart00303   1 FNPICVFWDESS--GEWSTRGCELLETNGTHTTCSCNHLTTFAVLMDVPP 48
EGF_CA smart00179
Calcium-binding EGF-like domain;
132-171 2.76e-08

Calcium-binding EGF-like domain;


:

Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 50.32  E-value: 2.76e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 158261825   132 DINECLTSSVCPEHSDCVNSMGSYSCSCQVGFISRNsTCE 171
Cdd:smart00179   1 DIDECASGNPCQNGGTCVNTVGSYRCECPPGYTDGR-NCE 39
EGF_CA smart00179
Calcium-binding EGF-like domain;
172-205 4.34e-08

Calcium-binding EGF-like domain;


:

Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 49.94  E-value: 4.34e-08
                           10        20        30
                   ....*....|....*....|....*....|....
gi 158261825   172 DVDECADPRACPEHATCNNTVGNYSCFCNPGFES 205
Cdd:smart00179   1 DIDECASGNPCQNGGTCVNTVGSYRCECPPGYTD 34
EGF_CA smart00179
Calcium-binding EGF-like domain;
221-250 3.86e-07

Calcium-binding EGF-like domain;


:

Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 47.24  E-value: 3.86e-07
                           10        20        30
                   ....*....|....*....|....*....|..
gi 158261825   221 DIDECTEM--CPINSTCTNTPGSYFCTCHPGF 250
Cdd:smart00179   1 DIDECASGnpCQNGGTCVNTVGSYRCECPPGY 32
EGF_CA smart00179
Calcium-binding EGF-like domain;
80-114 1.65e-06

Calcium-binding EGF-like domain;


:

Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 45.32  E-value: 1.65e-06
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 158261825    80 DIDECSqSPQPCGPNSSCKNLSGRYKCSCLDGFSS 114
Cdd:smart00179   1 DIDECA-SGNPCQNGGTCVNTVGSYRCECPPGYTD 34
EGF_CA smart00179
Calcium-binding EGF-like domain;
268-301 2.95e-05

Calcium-binding EGF-like domain;


:

Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 41.85  E-value: 2.95e-05
                           10        20        30
                   ....*....|....*....|....*....|....
gi 158261825   268 DIDECrQDPSTCGPNSICTNALGSYSCGCIAGFH 301
Cdd:smart00179   1 DIDEC-ASGNPCQNGGTCVNTVGSYRCECPPGYT 33
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
33-62 8.97e-04

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


:

Pssm-ID: 238011  Cd Length: 38  Bit Score: 37.62  E-value: 8.97e-04
                         10        20        30
                 ....*....|....*....|....*....|
gi 158261825  33 NNCRDSTLCPAYATCTNTVDSYYCACKQGF 62
Cdd:cd00054    3 DECASGNPCQNGGTCVNTVGSYRCSCPPGY 32
 
Name Accession Description Interval E-value
7tmB2_EMR cd15439
epidermal growth factor-like module-containing mucin-like hormone receptors, member of the ...
599-864 2.00e-150

epidermal growth factor-like module-containing mucin-like hormone receptors, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4) and the leukocyte cell-surface antigen CD97, are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying number of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of EMR2, alternative splicing results in four isoforms possessing either two (EGF1,2), three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320555 [Multi-domain]  Cd Length: 263  Bit Score: 443.32  E-value: 2.00e-150
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 599 DFSLYIISHVGIIISLVCLVLAIATFLLCRSIRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNKMGCAIIAGFLHYLFLA 678
Cdd:cd15439    1 DLALTVITYVGLIISLLCLFLAILTFLLCRSIRNTSTSLHLQLSLCLFLADLLFLVGIDRTDNKVLCSIIAGFLHYLFLA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 679 CFFWMLVEAVILFLMVRNLKVVNYFSSRNIKMLHICAFGYGLPMLVVVISASVQPQGYGMHNRCWLNTETGFIWSFLGPV 758
Cdd:cd15439   81 CFAWMFLEAVHLFLTVRNLKVVNYFSSHRFKKRFMYPVGYGLPAVIVAISAAVNPQGYGTPKHCWLSMEKGFIWSFLGPV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 759 CTVIVtlqINSLLLTWTLWILRQRLSSVNAEVSTLKDTRLLTFKAFAQLFILGCSWVLGIFQIGPVAGVMAYLFTIINSL 838
Cdd:cd15439  161 CVIIV---INLVLFCLTLWILREKLSSLNAEVSTLKNTRLLTFKAIAQLFILGCTWILGLFQVGPVATVMAYLFTITNSL 237
                        250       260
                 ....*....|....*....|....*.
gi 158261825 839 QGAFIFLIHCLLNGQVREEYKRWITG 864
Cdd:cd15439  238 QGVFIFLVHCLLNRQVREEYRRWITG 263
7tm_2 pfam00002
7 transmembrane receptor (Secretin family); This family is known as Family B, the ...
599-843 4.44e-75

7 transmembrane receptor (Secretin family); This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognized. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97; calcium-independent receptors for latrotoxin, and brain-specific angiogenesis inhibitors amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins. Other than the typical seven-transmembrane region, characteriztic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling.


Pssm-ID: 459625 [Multi-domain]  Cd Length: 248  Bit Score: 245.65  E-value: 4.44e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825  599 DFSLYIISHVGIIISLVCLVLAIATFLLCRSIRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNK--------MGCAIIAG 670
Cdd:pfam00002   1 ALSLKVIYTVGYSLSLVALLLAIAIFLLFRKLHCTRNYIHLNLFASFILRALLFLVGDAVLFNKqdldhcswVGCKVVAV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825  671 FLHYLFLACFFWMLVEAVILFLMVrnlkvVNYFSSRNIKMLHICAFGYGLPMLVVVISASVQPQGYGMHNRCWLNTETGF 750
Cdd:pfam00002  81 FLHYFFLANFFWMLVEGLYLYTLL-----VEVFFSERKYFWWYLLIGWGVPALVVGIWAGVDPKGYGEDDGCWLSNENGL 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825  751 IWSFLGPVCTVIVtlqINSLLLTWTLWILRQRLSSVNAEVSTLKDTRLLTFKAFAQLFILGCSWVLGIFQIGPV---AGV 827
Cdd:pfam00002 156 WWIIRGPILLIIL---VNFIIFINIVRILVQKLRETNMGKSDLKQYRRLAKSTLLLLPLLGITWVFGLFAFNPEntlRVV 232
                         250
                  ....*....|....*.
gi 158261825  828 MAYLFTIINSLQGAFI 843
Cdd:pfam00002 233 FLYLFLILNSFQGFFV 248
GPS smart00303
G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin ...
546-595 1.50e-11

G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin REJ and polycystin.


Pssm-ID: 197639  Cd Length: 49  Bit Score: 60.09  E-value: 1.50e-11
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 158261825   546 ERPICVSWSTDVkgGRWTSFGCVILEASETYTICSCNQMANLAVIMASGE 595
Cdd:smart00303   1 FNPICVFWDESS--GEWSTRGCELLETNGTHTTCSCNHLTTFAVLMDVPP 48
GPS pfam01825
GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for ...
548-590 1.38e-08

GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for auto-proteolysis, so is thus named, GPS. The GPS motif is a conserved sequence of ~40 amino acids containing canonical cysteine and tryptophan residues, and is the most highly conserved part of the domain. In most, if not all, cell-adhesion GPCRs these undergo autoproteolysis in the GPS between a conserved aliphatic residue (usually a leucine) and a threonine, serine, or cysteine residue. In higher eukaryotes this motif is found embedded in the C-terminal beta-stranded part of a GAIN domain - GPCR-Autoproteolysis INducing (GAIN). The GAIN-GPS domain adopts a fold in which the GPS motif, at the C-terminus, forms five beta-strands that are tightly integrated into the overall GAIN domain. The GPS motif, evolutionarily conserved from tetrahymena to mammals, is the only extracellular domain shared by all human cell-adhesion GPCRs and PKD proteins, and is the locus of multiple human disease mutations. The GAIN-GPS domain is both necessary and sufficient functionally for autoproteolysis, suggesting an autoproteolytic mechanism whereby the overall GAIN domain fine-tunes the chemical environment in the GPS to catalyze peptide bond hydrolysis. In the cell-adhesion GPCRs and PKD proteins, the GPS motif is always located at the end of their long N-terminal extracellular regions, immediately before the first transmembrane helix of the respective protein.


Pssm-ID: 460350  Cd Length: 44  Bit Score: 51.54  E-value: 1.38e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 158261825  548 PICVSWS-TDVKGGRWTSFGCVILEASETYTICSCNQMANLAVI 590
Cdd:pfam01825   1 PQCVFWDfTNSTTGRWSTEGCTTVSLNDTHTVCSCNHLTSFAVL 44
EGF_CA smart00179
Calcium-binding EGF-like domain;
132-171 2.76e-08

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 50.32  E-value: 2.76e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 158261825   132 DINECLTSSVCPEHSDCVNSMGSYSCSCQVGFISRNsTCE 171
Cdd:smart00179   1 DIDECASGNPCQNGGTCVNTVGSYRCECPPGYTDGR-NCE 39
EGF_CA smart00179
Calcium-binding EGF-like domain;
172-205 4.34e-08

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 49.94  E-value: 4.34e-08
                           10        20        30
                   ....*....|....*....|....*....|....
gi 158261825   172 DVDECADPRACPEHATCNNTVGNYSCFCNPGFES 205
Cdd:smart00179   1 DIDECASGNPCQNGGTCVNTVGSYRCECPPGYTD 34
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
132-171 7.12e-08

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 49.17  E-value: 7.12e-08
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 158261825 132 DINECLTSSVCPEHSDCVNSMGSYSCSCQVGFISRNstCE 171
Cdd:cd00054    1 DIDECASGNPCQNGGTCVNTVGSYRCSCPPGYTGRN--CE 38
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
172-204 8.57e-08

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 48.79  E-value: 8.57e-08
                         10        20        30
                 ....*....|....*....|....*....|...
gi 158261825 172 DVDECADPRACPEHATCNNTVGNYSCFCNPGFE 204
Cdd:cd00054    1 DIDECASGNPCQNGGTCVNTVGSYRCSCPPGYT 33
EGF_CA smart00179
Calcium-binding EGF-like domain;
221-250 3.86e-07

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 47.24  E-value: 3.86e-07
                           10        20        30
                   ....*....|....*....|....*....|..
gi 158261825   221 DIDECTEM--CPINSTCTNTPGSYFCTCHPGF 250
Cdd:smart00179   1 DIDECASGnpCQNGGTCVNTVGSYRCECPPGY 32
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
221-250 8.32e-07

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 46.09  E-value: 8.32e-07
                         10        20        30
                 ....*....|....*....|....*....|..
gi 158261825 221 DIDECTEM--CPINSTCTNTPGSYFCTCHPGF 250
Cdd:cd00054    1 DIDECASGnpCQNGGTCVNTVGSYRCSCPPGY 32
EGF_CA pfam07645
Calcium-binding EGF domain;
172-202 1.58e-06

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 45.31  E-value: 1.58e-06
                          10        20        30
                  ....*....|....*....|....*....|..
gi 158261825  172 DVDECADPRA-CPEHATCNNTVGNYSCFCNPG 202
Cdd:pfam07645   1 DVDECATGTHnCPANTVCVNTIGSFECRCPDG 32
EGF_CA smart00179
Calcium-binding EGF-like domain;
80-114 1.65e-06

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 45.32  E-value: 1.65e-06
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 158261825    80 DIDECSqSPQPCGPNSSCKNLSGRYKCSCLDGFSS 114
Cdd:smart00179   1 DIDECA-SGNPCQNGGTCVNTVGSYRCECPPGYTD 34
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
80-113 3.96e-06

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 44.16  E-value: 3.96e-06
                         10        20        30
                 ....*....|....*....|....*....|....
gi 158261825  80 DIDECSqSPQPCGPNSSCKNLSGRYKCSCLDGFS 113
Cdd:cd00054    1 DIDECA-SGNPCQNGGTCVNTVGSYRCSCPPGYT 33
EGF_CA pfam07645
Calcium-binding EGF domain;
221-249 2.34e-05

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 41.84  E-value: 2.34e-05
                          10        20        30
                  ....*....|....*....|....*....|..
gi 158261825  221 DIDEC---TEMCPINSTCTNTPGSYFCTCHPG 249
Cdd:pfam07645   1 DVDECatgTHNCPANTVCVNTIGSFECRCPDG 32
EGF_CA smart00179
Calcium-binding EGF-like domain;
268-301 2.95e-05

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 41.85  E-value: 2.95e-05
                           10        20        30
                   ....*....|....*....|....*....|....
gi 158261825   268 DIDECrQDPSTCGPNSICTNALGSYSCGCIAGFH 301
Cdd:smart00179   1 DIDEC-ASGNPCQNGGTCVNTVGSYRCECPPGYT 33
EGF_CA pfam07645
Calcium-binding EGF domain;
132-162 6.88e-05

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 40.68  E-value: 6.88e-05
                          10        20        30
                  ....*....|....*....|....*....|..
gi 158261825  132 DINECLT-SSVCPEHSDCVNSMGSYSCSCQVG 162
Cdd:pfam07645   1 DVDECATgTHNCPANTVCVNTIGSFECRCPDG 32
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
268-301 8.07e-05

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 40.70  E-value: 8.07e-05
                         10        20        30
                 ....*....|....*....|....*....|....
gi 158261825 268 DIDECrQDPSTCGPNSICTNALGSYSCGCIAGFH 301
Cdd:cd00054    1 DIDEC-ASGNPCQNGGTCVNTVGSYRCSCPPGYT 33
EGF_CA pfam07645
Calcium-binding EGF domain;
268-299 1.87e-04

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 39.53  E-value: 1.87e-04
                          10        20        30
                  ....*....|....*....|....*....|..
gi 158261825  268 DIDECRQDPSTCGPNSICTNALGSYSCGCIAG 299
Cdd:pfam07645   1 DVDECATGTHNCPANTVCVNTIGSFECRCPDG 32
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
33-62 8.97e-04

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 37.62  E-value: 8.97e-04
                         10        20        30
                 ....*....|....*....|....*....|
gi 158261825  33 NNCRDSTLCPAYATCTNTVDSYYCACKQGF 62
Cdd:cd00054    3 DECASGNPCQNGGTCVNTVGSYRCSCPPGY 32
EGF_CA pfam07645
Calcium-binding EGF domain;
80-111 9.39e-04

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 37.22  E-value: 9.39e-04
                          10        20        30
                  ....*....|....*....|....*....|..
gi 158261825   80 DIDECSQSPQPCGPNSSCKNLSGRYKCSCLDG 111
Cdd:pfam07645   1 DVDECATGTHNCPANTVCVNTIGSFECRCPDG 32
EGF_CA smart00179
Calcium-binding EGF-like domain;
33-62 2.86e-03

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 36.07  E-value: 2.86e-03
                           10        20        30
                   ....*....|....*....|....*....|
gi 158261825    33 NNCRDSTLCPAYATCTNTVDSYYCACKQGF 62
Cdd:smart00179   3 DECASGNPCQNGGTCVNTVGSYRCECPPGY 32
EGF_3 pfam12947
EGF domain; This family includes a variety of EGF-like domain homologs. This family includes ...
41-62 4.18e-03

EGF domain; This family includes a variety of EGF-like domain homologs. This family includes the C-terminal domain of the malaria parasite MSP1 protein.


Pssm-ID: 463759 [Multi-domain]  Cd Length: 36  Bit Score: 35.65  E-value: 4.18e-03
                          10        20
                  ....*....|....*....|..
gi 158261825   41 CPAYATCTNTVDSYYCACKQGF 62
Cdd:pfam12947   8 CHPNATCTNTGGSFTCTCNDGY 29
 
Name Accession Description Interval E-value
7tmB2_EMR cd15439
epidermal growth factor-like module-containing mucin-like hormone receptors, member of the ...
599-864 2.00e-150

epidermal growth factor-like module-containing mucin-like hormone receptors, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4) and the leukocyte cell-surface antigen CD97, are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying number of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of EMR2, alternative splicing results in four isoforms possessing either two (EGF1,2), three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320555 [Multi-domain]  Cd Length: 263  Bit Score: 443.32  E-value: 2.00e-150
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 599 DFSLYIISHVGIIISLVCLVLAIATFLLCRSIRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNKMGCAIIAGFLHYLFLA 678
Cdd:cd15439    1 DLALTVITYVGLIISLLCLFLAILTFLLCRSIRNTSTSLHLQLSLCLFLADLLFLVGIDRTDNKVLCSIIAGFLHYLFLA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 679 CFFWMLVEAVILFLMVRNLKVVNYFSSRNIKMLHICAFGYGLPMLVVVISASVQPQGYGMHNRCWLNTETGFIWSFLGPV 758
Cdd:cd15439   81 CFAWMFLEAVHLFLTVRNLKVVNYFSSHRFKKRFMYPVGYGLPAVIVAISAAVNPQGYGTPKHCWLSMEKGFIWSFLGPV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 759 CTVIVtlqINSLLLTWTLWILRQRLSSVNAEVSTLKDTRLLTFKAFAQLFILGCSWVLGIFQIGPVAGVMAYLFTIINSL 838
Cdd:cd15439  161 CVIIV---INLVLFCLTLWILREKLSSLNAEVSTLKNTRLLTFKAIAQLFILGCTWILGLFQVGPVATVMAYLFTITNSL 237
                        250       260
                 ....*....|....*....|....*.
gi 158261825 839 QGAFIFLIHCLLNGQVREEYKRWITG 864
Cdd:cd15439  238 QGVFIFLVHCLLNRQVREEYRRWITG 263
7tmB2_EMR_Adhesion_II cd15931
EGF-like module receptors, group II adhesion GPCRs, member of class B2 family of ...
599-863 1.63e-136

EGF-like module receptors, group II adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the leukocyte cell-surface antigen CD97 and the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4), are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily B2 of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying numbers of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of CD97, alternative splicing results in three isoforms possessing either three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. On the other hand, EMR2 generates four isoforms possessing either two (EGF1,2), three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. For example, CD97, which is involved in angiogenesis and the migration and invasion of tumor cells, has been shown to promote cell aggregation in a GPS proteolysis-dependent manner. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320597 [Multi-domain]  Cd Length: 262  Bit Score: 407.29  E-value: 1.63e-136
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 599 DFSLYIISHVGIIISLVCLVLAIATFLLCRSIRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNKMGCAIIAGFLHYLFLA 678
Cdd:cd15931    1 DPFLEWINRVGVIVSLFCLGLAIFTFLLCRWIPKINTTAHLHLCLCLSMSHTLFLAGIEYVENELACTVMAGLLHYLFLA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 679 CFFWMLVEAVILFLMVRNLKVVNYFSSRNIKMLHICAFGYGLPMLVVVISASVQPQGYGMHNRCWLNTETGFIWSFLGPV 758
Cdd:cd15931   81 SFVWMLLEALQLHLLVRRLTKVQVIQRDGLPRPLLCLIGYGVPFLIVGVSALVYSDGYGEAKMCWLSQERGFNWSFLGPV 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 759 CTVIVtlqINSLLLTWTLWILRQRLSSVNAEVSTLKDTRLLTFKAFAQLFILGCSWVLGIFQIGPVAGVMAYLFTIINSL 838
Cdd:cd15931  161 IAIIG---INWILFCATLWCLRQTLSNMNSDISQLKDTRLLTFKAVAQLFILGCTWVLGLFQTNPVALVFQYLFTILNSL 237
                        250       260
                 ....*....|....*....|....*
gi 158261825 839 QGAFIFLIHCLLNGQVREEYKRWIT 863
Cdd:cd15931  238 QGAFLFLVHCLLNKEVREEYIKWLT 262
7tmB2_CD97 cd15438
CD97 antigen, member of the class B2 family of seven-transmembrane G protein-coupled receptors; ...
599-862 1.79e-84

CD97 antigen, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group II adhesion GPCRs, including the leukocyte cell-surface antigen CD97 and the epidermal growth factor (EGF)-module-containing, mucin-like hormone receptor (EMR1-4), are primarily expressed in cells of the immune system. All EGF-TM7 receptors, which belong to the B2 subfamily B2 of adhesion GPCRs, are members of group II, except for ETL (EGF-TM7-latrophilin related protein), which is classified into group I. Members of the EGF-TM7 receptors are characterized by the presence of varying numbers of N-terminal EGF-like domains, which play critical roles in ligand recognition and cell adhesion, linked by a stalk region to a class B seven-transmembrane domain. In the case of CD97, alternative splicing results in three isoforms possessing either three (EGF1,2,5), four (EGF1,2,3,5) or five (EGF1,2,3,4,5) EGF-like domains. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. For example, CD97, which is involved in angiogenesis and the migration and invasion of tumor cells, has been shown to promote cell aggregation in a GPS proteolysis-dependent manner. CD97 is widely expressed on lymphocytes, monocytes, macrophages, dendritic cells, granulocytes and smooth muscle cells as well as in a variety of human tumors including colorectal, gastric, esophageal pancreatic, and thyroid carcinoma. EMR2 shares strong sequence homology with CD97, differing by only six amino acids. However, unlike CD97, EMR2 is not found in those of CD97-positive tumor cells and is not expressed on lymphocytes but instead on monocytes, macrophages and granulocytes. CD97 has three known ligands: CD55, decay-accelerating factor for regulation of complement system; chondroitin sulfate, a glycosaminoglycan found in the extracellular matrix; and the integrin alpha5beta1, which play a role in angiogenesis. Although EMR2 does not effectively interact with CD55, the fourth EGF-like domain of this receptor binds to chondroitin sulfate to mediate cell attachment.


Pssm-ID: 320554 [Multi-domain]  Cd Length: 261  Bit Score: 271.25  E-value: 1.79e-84
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 599 DFSLYIISHVGIIISLVCLVLAIATFLLCRSIRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNKMGCAIIAGFLHYLFLA 678
Cdd:cd15438    1 DWPLTLITKVGLSVSLFCLFLCILTFLFCRSIRGTRNTIHLHLCLSLFLAHLIFLLGINNTNNQVACAVVAGLLHYFFLA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 679 CFFWMLVEAVILFLMvrnlkVVNYFSSRNIKMLHICAFGYGLPMLVVVISASVQPQGYGMHNRCWLNTETGFIWSFLGPV 758
Cdd:cd15438   81 AFCWMSLEGVELYLM-----VVQVFNTQSLKKRYLLLIGYGVPLVIVAISAAVNSKGYGTQRHCWLSLERGFLWSFLGPV 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 759 CTVIVtlqINSLLLTWTLWILRQRLSSVNAEVSTLKDTRLLTFKAFAQLFILGCSWVLGIFQIGPVAGVMAYLFTIINSL 838
Cdd:cd15438  156 CLIIL---VNAIIFVITVWKLAEKFSSINPDMEKLRKIRALTITAIAQLCILGCTWIFGFFQFSDSTLVMSYLFTILNSL 232
                        250       260
                 ....*....|....*....|....
gi 158261825 839 QGAFIFLIHCLLNGQVREEYKRWI 862
Cdd:cd15438  233 QGLFIFLLHCLLSKQVREEYSRWL 256
7tm_2 pfam00002
7 transmembrane receptor (Secretin family); This family is known as Family B, the ...
599-843 4.44e-75

7 transmembrane receptor (Secretin family); This family is known as Family B, the secretin-receptor family or family 2 of the G-protein-coupled receptors (GCPRs). They have been described in many animal species, but not in plants, fungi or prokaryotes. Three distinct sub-families are recognized. Subfamily B1 contains classical hormone receptors, such as receptors for secretin and glucagon, that are all involved in cAMP-mediated signalling pathways. Subfamily B2 contains receptors with long extracellular N-termini, such as the leukocyte cell-surface antigen CD97; calcium-independent receptors for latrotoxin, and brain-specific angiogenesis inhibitors amongst others. Subfamily B3 includes Methuselah and other Drosophila proteins. Other than the typical seven-transmembrane region, characteriztic structural features include an amino-terminal extracellular domain involved in ligand binding, and an intracellular loop (IC3) required for specific G-protein coupling.


Pssm-ID: 459625 [Multi-domain]  Cd Length: 248  Bit Score: 245.65  E-value: 4.44e-75
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825  599 DFSLYIISHVGIIISLVCLVLAIATFLLCRSIRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNK--------MGCAIIAG 670
Cdd:pfam00002   1 ALSLKVIYTVGYSLSLVALLLAIAIFLLFRKLHCTRNYIHLNLFASFILRALLFLVGDAVLFNKqdldhcswVGCKVVAV 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825  671 FLHYLFLACFFWMLVEAVILFLMVrnlkvVNYFSSRNIKMLHICAFGYGLPMLVVVISASVQPQGYGMHNRCWLNTETGF 750
Cdd:pfam00002  81 FLHYFFLANFFWMLVEGLYLYTLL-----VEVFFSERKYFWWYLLIGWGVPALVVGIWAGVDPKGYGEDDGCWLSNENGL 155
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825  751 IWSFLGPVCTVIVtlqINSLLLTWTLWILRQRLSSVNAEVSTLKDTRLLTFKAFAQLFILGCSWVLGIFQIGPV---AGV 827
Cdd:pfam00002 156 WWIIRGPILLIIL---VNFIIFINIVRILVQKLRETNMGKSDLKQYRRLAKSTLLLLPLLGITWVFGLFAFNPEntlRVV 232
                         250
                  ....*....|....*.
gi 158261825  828 MAYLFTIINSLQGAFI 843
Cdd:pfam00002 233 FLYLFLILNSFQGFFV 248
7tmB2_latrophilin-like_invertebrate cd15440
invertebrate latrophilin-like receptors, member of the class B2 family of seven-transmembrane ...
600-862 1.32e-71

invertebrate latrophilin-like receptors, member of the class B2 family of seven-transmembrane G protein-coupled receptors; This subgroup includes latrophilin-like proteins that are found in invertebrates such as insects and worms. Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of vertebrate latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320556 [Multi-domain]  Cd Length: 259  Bit Score: 236.78  E-value: 1.32e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 600 FSLYIISHVGIIISLVCLVLAIATFLLCRSIRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNKMGCAIIAGFLHYLFLAC 679
Cdd:cd15440    2 SALTFITYIGCIISIVCLLLAFITFTCFRNLQCDRNTIHKNLCLCLLIAEIVFLLGIDQTENRTLCGVIAGLLHYFFLAA 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 680 FFWMLVEAVILFLMvrnlkVVNYFSSRNIKMLHICAFGYGLPMLVVVISASVQPQGYGMHNRCWLNTETGFIWSFLGPVC 759
Cdd:cd15440   82 FSWMLLEGFQLYVM-----LVEVFEPEKSRIKWYYLFGYGLPALIVAVSAGVDPTGYGTEDHCWLSTENGFIWSFVGPVI 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 760 TVIVtlqINSL--LLTWTLWILRQRLSSVNAEVSTLKDTRLLTFKAFAQLFILGCSWVLGIFQIGPVAGVMAYLFTIINS 837
Cdd:cd15440  157 VVLL---ANLVflGMAIYVMCRHSSRSASKKDASKLKNIRGWLKGSIVLVVLLGLTWTFGLLFINQESIVMAYIFTILNS 233
                        250       260
                 ....*....|....*....|....*
gi 158261825 838 LQGAFIFLIHCLLNGQVREEYKRWI 862
Cdd:cd15440  234 LQGLFIFIFHCVLNEKVRKELRRWL 258
7tmB2_Latrophilin_Adhesion_I cd15252
Latrophilins and similar receptors, group I adhesion GPCRs, member of class B2 family of ...
599-862 4.14e-63

Latrophilins and similar receptors, group I adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; Group I adhesion GPCRs consist of latrophilins (also called lectomedins or latrotoxin receptors) and ETL (EGF-TM7-latrophilin-related protein. These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320380 [Multi-domain]  Cd Length: 257  Bit Score: 213.52  E-value: 4.14e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 599 DFSLYIISHVGIIISLVCLVLAIATFLLCRSIRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNKMGCAIIAGFLHYLFLA 678
Cdd:cd15252    1 YNILTRITQVGIIISLVCLAICIFTFWFFRGLQSDRTTIHKNLCISLFLAELVFLIGINTTTNKIFCSVIAGLLHYFFLA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 679 CFFWMLVEAVILFLMvrnlkVVNYFSSRNIKMLHICAFGYGLPMLVVVISASVQPQGYGMHNRCWLNTETGFIWSFLGPV 758
Cdd:cd15252   81 AFAWMFIEGIQLYLM-----LVEVFENEGSRHKNFYIFGYGSPAVIVGVSAALGYRYYGTTKVCWLSTENYFIWSFIGPA 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 759 CTVIVtlqINSLLLTWTLWILRQRLSSVNAEVSTLKDTRLLTFKAFAQLFILGCSWVLGIFQIGPVAGVMAYLFTIINSL 838
Cdd:cd15252  156 TLIIL---LNLIFLGVAIYKMFRHTAGLKPEVSCLENIRSWARGAIALLFLLGLTWIFGVLHINHASVVMAYLFTVSNSL 232
                        250       260
                 ....*....|....*....|....
gi 158261825 839 QGAFIFLIHCLLNGQVREEYKRWI 862
Cdd:cd15252  233 QGMFIFLFHCVLSRKVRKEYYKLF 256
7tmB2_GPR133-like_Adhesion_V cd15933
orphan GPR133 and related proteins, group V adhesion GPCRs, member of class B2 family of ...
602-858 2.47e-59

orphan GPR133 and related proteins, group V adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group V adhesion GPCRs include orphan receptors GPR133, GPR144, and closely related proteins. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the G(s) protein, leading to activation of adenylate cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320599 [Multi-domain]  Cd Length: 252  Bit Score: 202.94  E-value: 2.47e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 602 LYIISHVGIIISLVCLVLAIATFLLCRSIRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNKMGCAIIAGFLHYLFLACFF 681
Cdd:cd15933    4 LSIISYIGCGISIACLALTLIIFLVLRVLSSDRFQIHKNLCVALLLAQILLLAGEWAEGNKVACKVVAILLHFFFMAAFS 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 682 WMLVEAVILFLMVrnLKVVNYFSsrnikMLHIC-AFGYGLPMLVVVISASVQPQGYGMHNRCWLNTETGFIWSFLGPVCT 760
Cdd:cd15933   84 WMLVEGLHLYLMI--VKVFNYKS-----KMRYYyFIGWGLPAIIVAISLAILFDDYGSPNVCWLSLDDGLIWAFVGPVIF 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 761 VIVtlqINsLLLTWTLWILRQRLSSVNAEVSTLKDTRL-LTFKAFAQLF-ILGCSWVLGIFQIGPVAGVMAYLFTIINSL 838
Cdd:cd15933  157 IIT---VN-TVILILVVKITVSLSTNDAKKSQGTLAQIkSTAKASVVLLpILGLTWLFGVLVVNSQTIVFQYIFVILNSL 232
                        250       260
                 ....*....|....*....|
gi 158261825 839 QGAFIFLIHCLLNGQVREEY 858
Cdd:cd15933  233 QGLMIFLFHCVLNSEVRSAF 252
7tmB2_Adhesion cd15040
adhesion receptors, subfamily B2 of the class B family of seven-transmembrane G ...
599-858 5.90e-59

adhesion receptors, subfamily B2 of the class B family of seven-transmembrane G protein-coupled receptors; The B2 subfamily of class B GPCRs consists of cell-adhesion receptors with 33 members in humans and vertebrates. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing a variety of structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, linked to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320168 [Multi-domain]  Cd Length: 253  Bit Score: 201.65  E-value: 5.90e-59
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 599 DFSLYIISHVGIIISLVCLVLAIATFLLCRSIRNHNTYLHLHL-CVCLLLAKTLFLAGIHKTDNKMGCAIIAGFLHYLFL 677
Cdd:cd15040    1 EKALSIITYIGCGLSLLGLLLTIITYILFRKLRKRKPTKILLNlCLALLLANLLFLFGINSTDNPVLCTAVAALLHYFLL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 678 ACFFWMLVEAVILFLMvrnLKVVNYFSSRNIkMLHICAFGYGLPMLVVVISASVQPQGYGMH-NRCWLNTETGFIWSFLG 756
Cdd:cd15040   81 ASFMWMLVEALLLYLR---LVKVFGTYPRHF-ILKYALIGWGLPLIIVIITLAVDPDSYGNSsGYCWLSNGNGLYYAFLG 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 757 PVCTVIVtlqINSLLLTWTLWILRQRlsSVNAEVSTLKDTRLLTFKAFAQLFILGCSWVLGIFQIGPVAGVMAYLFTIIN 836
Cdd:cd15040  157 PVLLIIL---VNLVIFVLVLRKLLRL--SAKRNKKKRKKTKAQLRAAVSLFFLLGLTWIFGILAIFGARVVFQYLFAIFN 231
                        250       260
                 ....*....|....*....|..
gi 158261825 837 SLQGAFIFLIHCLLNGQVREEY 858
Cdd:cd15040  232 SLQGFFIFIFHCLRNKEVRKAW 253
7tm_classB cd13952
class B family of seven-transmembrane G protein-coupled receptors; The class B of ...
599-858 6.31e-54

class B family of seven-transmembrane G protein-coupled receptors; The class B of seven-transmembrane GPCRs is classified into three major subfamilies: subfamily B1 (secretin-like receptor family), B2 (adhesion family), and B3 (Methuselah-like family). The class B receptors have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi or prokaryotes. The B1 subfamily comprises receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the subfamily B1 receptors preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The subfamily B2 consists of cell-adhesion receptors with 33 members in humans and vertebrates. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing a variety of structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, linked to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. Furthermore, the subfamily B3 includes Methuselah (Mth) protein, which was originally identified in Drosophila as a GPCR affecting stress resistance and aging, and its closely related proteins.


Pssm-ID: 410627 [Multi-domain]  Cd Length: 260  Bit Score: 188.19  E-value: 6.31e-54
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 599 DFSLYIISHVGIIISLVCLVLAIATFLLCRSIRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNKM--GCAIIAGFLHYLF 676
Cdd:cd13952    1 DLALSIITYIGCSLSLVGLLLTIITYLLFPKLRNLRGKILINLCLSLLLAQLLFLIGQLLTSSDRpvLCKALAILLHYFL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 677 LACFFWMLVEAVILFLMVrnlkVVNYFSSRNIKMLHICAFGYGLPMLVVVISASVQPQGYGMH-----NRCWLNTETGFI 751
Cdd:cd13952   81 LASFFWMLVEAFDLYRTF----VKVFGSSERRRFLKYSLYGWGLPLLIVIITAIVDFSLYGPSpgyggEYCWLSNGNALL 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 752 WSFLGPVCTVIVtlqINSLLLTWTLWILRQRLSSVNAEVSTLKDTRllTFKAFAQLFIL-GCSWVLGIFQIGPVAG-VMA 829
Cdd:cd13952  157 WAFYGPVLLILL---VNLVFFILTVRILLRKLRETPKQSERKSDRK--QLRAYLKLFPLmGLTWIFGILAPFVGGSlVFW 231
                        250       260
                 ....*....|....*....|....*....
gi 158261825 830 YLFTIINSLQGAFIFLIHCLLNGQVREEY 858
Cdd:cd13952  232 YLFDILNSLQGFFIFLIFCLKNKEVRRLL 260
7tmB2_Latrophilin-1 cd16007
Latrophilin-1, member of the class B2 family of seven-transmembrane G protein-coupled ...
602-860 1.78e-53

Latrophilin-1, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320673 [Multi-domain]  Cd Length: 258  Bit Score: 186.67  E-value: 1.78e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 602 LYIISHVGIIISLVCLVLAIATFLLCRSIRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNKMGCAIIAGFLHYLFLACFF 681
Cdd:cd16007    4 LSVITWVGIVISLVCLAICISTFCFLRGLQTDRNTIHKNLCINLFLAELLFLIGIDKTQYQIACPIFAGLLHFFFLAAFS 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 682 WMLVEAVILFLMvrnlkVVNYFSSRNIKMLHICAFGYGLPMLVVVISASVQPQGYGMHNRCWLNTETGFIWSFLGPVCTV 761
Cdd:cd16007   84 WLCLEGVQLYLM-----LVEVFESEYSRKKYYYLCGYCFPALVVGISAAIDYRSYGTEKACWLRVDNYFIWSFIGPVSFV 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 762 IVtlqINSLLLTWTLWILRQRLSSVNAEVSTLKDTRLLTFKAFAQLFILGCSWVLGIFQIGPVAGVMAYLFTIINSLQGA 841
Cdd:cd16007  159 IV---VNLVFLMVTLHKMIRSSSVLKPDSSRLDNIKSWALGAITLLFLLGLTWAFGLLFINKESVVMAYLFTTFNAFQGM 235
                        250
                 ....*....|....*....
gi 158261825 842 FIFLIHCLLNGQVREEYKR 860
Cdd:cd16007  236 FIFIFHCALQKKVHKEYSK 254
7tmB2_ETL cd15437
Epidermal Growth Factor, latrophilin and seven transmembrane domain-containing protein 1; ...
605-860 6.17e-51

Epidermal Growth Factor, latrophilin and seven transmembrane domain-containing protein 1; member of the class B2 family of seven-transmembrane G protein-coupled receptors; ETL (EGF-TM7-latrophilin-related protein) belongs to Group I adhesion GPCRs, which also include latrophilins (also called lectomedins or latrotoxin receptors). All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. ETL, for instance, contains EGF-like repeats, which also present in other EGF-TM7 adhesion GPCRs, such as Cadherin EGF LAG seven-pass G-type receptors (CELSR1-3), EGF-like module receptors (EMR1-3), CD97, and Flamingo. ETL is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320553 [Multi-domain]  Cd Length: 258  Bit Score: 179.69  E-value: 6.17e-51
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 605 ISHVGIIISLVCLVLAIATFLLCRSIRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNKMGCAIIAGFLHYLFLACFFWML 684
Cdd:cd15437    7 ITQLGIIISLICLSMCIFTFWFFSEIQSTRTTIHKNLCCSLFLAELIFLIGINMNANKLFCSIIAGLLHYFFLAAFAWMC 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 685 VEAVILFLMVRNLKVVNYFSSRNIKmlhicAFGYGLPMLVVVISASVQPQGYGMHNRCWLNTETGFIWSFLGPVCTVIVt 764
Cdd:cd15437   87 IEGIHLYLIVVGVIYNKGFLHKNFY-----IFGYGSPAVVVGISAALGYKYYGTTKVCWLSTENNFIWSFIGPACLIIL- 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 765 lqINSLLLTWTLWILRQRLSSVNAEVSTLKDTRLLTFKAFAQLFILGCSWVLGIFQIGPVAGVMAYLFTIINSLQGAFIF 844
Cdd:cd15437  161 --VNLLAFGVIIYKVFRHTAMLKPEVSCYENIRSCARGALALLFLLGATWIFGVLHVVYGSVVTAYLFTISNAFQGMFIF 238
                        250
                 ....*....|....*.
gi 158261825 845 LIHCLLNGQVREEYKR 860
Cdd:cd15437  239 IFLCVLSRKIQEEYYR 254
7tmB2_Latrophilin-2 cd16006
Latrophilin-2, member of the class B2 family of seven-transmembrane G protein-coupled ...
602-860 5.79e-48

Latrophilin-2, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320672 [Multi-domain]  Cd Length: 258  Bit Score: 171.25  E-value: 5.79e-48
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 602 LYIISHVGIIISLVCLVLAIATFLLCRSIRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNKMGCAIIAGFLHYLFLACFF 681
Cdd:cd16006    4 LTVITWVGIVISLVCLAICIFTFCFFRGLQSDRNTIHKNLCINLFIAEFIFLIGIDKTEYKIACPIFAGLLHFFFLAAFA 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 682 WMLVEAVILFLMvrnlkVVNYFSSRNIKMLHICAFGYGLPMLVVVISASVQPQGYGMHNRCWLNTETGFIWSFLGPVCTV 761
Cdd:cd16006   84 WMCLEGVQLYLM-----LVEVFESEYSRKKYYYVAGYLFPATVVGVSAAIDYKSYGTEKACWLRVDNYFIWSFIGPVTFI 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 762 IVtlqINSLLLTWTLWILRQRLSSVNAEVSTLKDTRLLTFKAFAQLFILGCSWVLGIFQIGPVAGVMAYLFTIINSLQGA 841
Cdd:cd16006  159 IL---LNLIFLVITLCKMVKHSNTLKPDSSRLENIKSWVLGAFALLCLLGLTWSFGLLFINEETIVMAYLFTIFNAFQGM 235
                        250
                 ....*....|....*....
gi 158261825 842 FIFLIHCLLNGQVREEYKR 860
Cdd:cd16006  236 FIFIFHCALQKKVRKEYSK 254
7tmB2_Latrophilin cd15436
Latrophilins, member of the class B2 family of seven-transmembrane G protein-coupled receptors; ...
599-860 1.66e-47

Latrophilins, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320552 [Multi-domain]  Cd Length: 258  Bit Score: 169.97  E-value: 1.66e-47
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 599 DFSLYIISHVGIIISLVCLVLAIATFLLCRSIRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNKMGCAIIAGFLHYLFLA 678
Cdd:cd15436    1 ELLLFVITWVGIVISLVCLLICIFTFCFFRGLQTDRNTIHKNLCINLFIAELLFLIGINRTQYTIACPIFAGLLHFFFLA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 679 CFFWMLVEAVILFLMVRNLkvvnyFSSRNIKMLHICAFGYGLPMLVVVISASVQPQGYGMHNRCWLNTETGFIWSFLGPV 758
Cdd:cd15436   81 AFCWLCLEGVQLYLLLVEV-----FESEYSRRKYFYLCGYSFPALVVAVSAAIDYRSYGTEKACWLRVDNYFIWSFIGPV 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 759 CTVIVtlqINSLLLTWTLWILRQRLSSVNAEVSTLKDTRLLTFKAFAQLFILGCSWVLGIFQIGPVAGVMAYLFTIINSL 838
Cdd:cd15436  156 TFVIT---LNLVFLVITLHKMVSHSDLLKPDSSRLDNIKSWALGAIALLFLLGLTWSFGLMFINEESVVMAYLFTIFNAF 232
                        250       260
                 ....*....|....*....|..
gi 158261825 839 QGAFIFLIHCLLNGQVREEYKR 860
Cdd:cd15436  233 QGVFIFIFHCALQKKVRKEYSK 254
7tmB2_Latrophilin-3 cd16005
Latrophilin-3, member of the class B2 family of seven-transmembrane G protein-coupled ...
599-860 1.41e-46

Latrophilin-3, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Latrophilins (also called lectomedins or latrotoxin receptors) belong to Group I adhesion GPCRs, which also include ETL (EGF-TM7-latrophilin-related protein). These receptors are a member of the adhesion family (subclass B2) that belongs to the class B GPCRs. Three subtypes of latrophilins have been identified: LPH1 (latrophilin-1), LPH2, and LPH3. The latrophilin-1 is a brain-specific calcium-independent receptor of alpha-latrotoxin, a potent presynaptic neurotoxin from the venom of the black widow spider that induces massive neurotransmitter release from sensory and motor neurons as well as endocrine cells, leading to nerve-terminal degeneration. Latrophilin-2 and -3, although sharing strong sequence homology to latrophilin-1, do not bind alpha-latrotoxin. While latrophilin-3 is also brain specific, latrophilin-2 is ubiquitously distributed. The endogenous ligands for these two receptors are unknown. ETL, a seven transmembrane receptor containing EGF-like repeats is highly expressed in heart, where developmentally regulated, as well as in normal smooth cells. The function of the ETL is unknown. All adhesion GPCRs possess large N-terminal extracellular domains containing multiple structural motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, coupled to a seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320671 [Multi-domain]  Cd Length: 258  Bit Score: 167.43  E-value: 1.41e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 599 DFSLYIISHVGIIISLVCLVLAIATFLLCRSIRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNKMGCAIIAGFLHYLFLA 678
Cdd:cd16005    1 DLLLDVITWVGILLSLVCLLICIFTFCFFRGLQSDRNTIHKNLCISLFVAELLFLIGINRTDQPIACAVFAALLHFFFLA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 679 CFFWMLVEAVILFLMvrnlkVVNYFSSRNIKMLHICAFGYGLPMLVVVISASVQPQGYGMHNRCWLNTETGFIWSFLGPV 758
Cdd:cd16005   81 AFTWMFLEGVQLYIM-----LVEVFESEHSRRKYFYLVGYGMPALIVAVSAAVDYRSYGTDKVCWLRLDTYFIWSFIGPA 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 759 CTVIVtlqINSLLLTWTLWILRQRLSSVNAEVSTLKDTRLLTFKAFAQLFILGCSWVLGIFQIGPVAGVMAYLFTIINSL 838
Cdd:cd16005  156 TLIIM---LNVIFLGIALYKMFHHTAILKPESGCLDNIKSWVIGAIALLCLLGLTWAFGLMYINESTVIMAYLFTIFNSL 232
                        250       260
                 ....*....|....*....|..
gi 158261825 839 QGAFIFLIHCLLNGQVREEYKR 860
Cdd:cd16005  233 QGMFIFIFHCVLQKKVRKEYGK 254
7tmB2_CELSR_Adhesion_IV cd15441
cadherin EGF LAG seven-pass G-type receptors, group IV adhesion GPCRs, member of the class B2 ...
599-860 1.64e-46

cadherin EGF LAG seven-pass G-type receptors, group IV adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. Celsr3 is expressed in both the developing and adult mouse brain. It has been functionally implicated in proper neuron migration and axon guidance in the CNS.


Pssm-ID: 320557 [Multi-domain]  Cd Length: 254  Bit Score: 167.04  E-value: 1.64e-46
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 599 DFSLYIISHVGIIISLVCLVLAIATFLLCRSIRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNKMGCAIIAGFLHYLFLA 678
Cdd:cd15441    1 VLLLKIVTYIGIGISLVLLVIAFLVLSCLRGLQSNSNSIHKNLVACLLLAELLFLLGINQTENLFPCKLIAILLHYFYLS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 679 CFFWMLVEAVILFLMVRNLKVVNYFssrniKMLHICAFGYGLPMLVVVISASVQPQGYGMHNRCWLNTETGFIWSFLGPV 758
Cdd:cd15441   81 AFSWLLVESLHLYRMLTEPRDINHG-----HMRFYYLLGYGIPAIIVGLSVGLRPDGYGNPDFCWLSVNETLIWSFAGPI 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 759 CTVIVtlqINSLLLTWTLWILRqRLSSVNAEVSTLkdtRLLTFKAFAQLFILGCSWVLGIFQIGPVAGVMAYLFTIINSL 838
Cdd:cd15441  156 AFVIV---ITLIIFILALRASC-TLKRHVLEKASV---RTDLRSSFLLLPLLGATWVFGLLAVNEDSELLHYLFAGLNFL 228
                        250       260
                 ....*....|....*....|..
gi 158261825 839 QGAFIFLIHCLLNGQVREEYKR 860
Cdd:cd15441  229 QGLFIFLFYCIFNKKVRRELKN 250
7tmB2_GPR133 cd15256
orphan adhesion receptor GPR133, member of the class B2 family of seven-transmembrane G ...
601-867 3.29e-44

orphan adhesion receptor GPR133, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR133 is an orphan receptor that belongs to the group V adhesion-GPCRs together with GPR144. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the Gs protein, leading to activation of adenylyl cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320384 [Multi-domain]  Cd Length: 260  Bit Score: 160.86  E-value: 3.29e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 601 SLYIISHVGIIISLVCLVLAIATFLLCRS---IRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNKMGCAIIAGFLHYLFL 677
Cdd:cd15256    3 ALSSITYVGCSLSIFCLAITLVTFAVLSSvstIRNQRYHIHANLSFAVLVAQILLLISFRFEPGTLPCKIMAILLHFFFL 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 678 ACFFWMLVEAVILFLMVrnlkvVNYFSSRNIKMLHICAFGYGLPMLVVVISASVQPQGYGMHNRCWLNTETGFIWSFLGP 757
Cdd:cd15256   83 SAFAWMLVEGLHLYSMV-----IKVFGSEESKHFYYYGIGWGSPLLICIISLTSALDSYGESDNCWLSLENGAIWAFVAP 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 758 VCTVIVTlqinSLLLTWTLWILRQRLSSVNAEVSTLKDTRLLTFKAFAQLF-ILGCSWVLGIFQIGPVAGVMAYLFTIIN 836
Cdd:cd15256  158 ALFVIVV----NIGILIAVTRVISRISADNYKVHGDANAFKLTAKAVAVLLpILGSSWVFGVLAVNTHALVFQYMFAIFN 233
                        250       260       270
                 ....*....|....*....|....*....|.
gi 158261825 837 SLQGAFIFLIHCLLNGQVREEYKRwitgKTK 867
Cdd:cd15256  234 SLQGFFIFLFHCLLNSEVRAAFKH----KTK 260
7tmB2_CELSR1 cd15991
Cadherin EGF LAG seven-pass G-type receptor 1, member of the class B2 family of ...
602-864 1.71e-37

Cadherin EGF LAG seven-pass G-type receptor 1, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320657 [Multi-domain]  Cd Length: 254  Bit Score: 141.14  E-value: 1.71e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 602 LYIISHVGIIISLVCLVLAIATFLLCRSIRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNKMGCAIIAGFLHYLFLACFF 681
Cdd:cd15991    4 LKIITYTTVSLSLVALLITFILLVLIRTLRSNLHSIHKNLVAALFFSELIFLIGINQTENPFVCTVVAILLHYFYMSTFA 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 682 WMLVEAVILFLMVRNLKVVNyfsSRNIKMLHicAFGYGLPMLVVVISASVQPQGYGMHNRCWLNTETGFIWSFLGPVCTV 761
Cdd:cd15991   84 WMFVEGLHIYRMLTEVRNIN---TGHMRFYY--VVGWGIPAIITGLAVGLDPQGYGNPDFCWLSVQDTLIWSFAGPIGIV 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 762 IVTLQINSLLLTWTLWILRQRLSSVNAEVSTLKdtrlltfKAFAQLFILGCSWVLGIFQIGPVAGVMAYLFTIINSLQGA 841
Cdd:cd15991  159 VIINTVIFVLAAKASCGRRQRYFEKSGVISMLR-------TAFLLLLLISATWLLGLMAVNSDTLSFHYLFAIFSCLQGI 231
                        250       260
                 ....*....|....*....|...
gi 158261825 842 FIFLIHCLLNGQVREEYKRWITG 864
Cdd:cd15991  232 FIFFFHCIFNKEVRKHLKNVLTG 254
7tmB3_Methuselah-like cd15039
Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G ...
602-862 5.94e-35

Methuselah-like subfamily B3, member of the class B family of seven-transmembrane G protein-coupled receptors; The subfamily B3 of class B GPCRs consists of Methuselah (Mth) and its closely related proteins found in bilateria. Mth was originally identified in Drosophila as a GPCR affecting stress resistance and aging. In addition to the seven transmembrane helices, Mth contains an N-terminal extracellular domain involved in ligand binding, and a third intracellular loop (IC3) required for the specificity of G-protein coupling. Drosophila Mth mutants showed an increase in average lifespan by 35% and greater resistance to a variety of stress factors, including starvation, high temperature, and paraquat-induced oxidative toxicity. Moreover, mutations in two endogenous peptide ligands of Methuselah, Stunted A and B, showed an increased in lifespan and resistance to oxidative stress induced by dietary paraquat. These results strongly suggest that the Stunted-Methuselah system plays important roles in stress response and aging.


Pssm-ID: 410632 [Multi-domain]  Cd Length: 270  Bit Score: 134.28  E-value: 5.94e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 602 LYIISHVGIIISLVCLVLAIATFLLCRSIRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNKM-GCAIIAGFLHYLFLACF 680
Cdd:cd15039    4 LGILTLIGLIISLVFLLLTLAVYALLPELRNLHGKCLMCLVLSLFVAYLLLLIGQLLSSGDStLCVALGILLHFFFLAAF 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 681 FWMLVEAVILFLMVRNLKVVNYFSSRNIKMLHICAFGYGLPMLVVVISASVQ---------PqGYGmHNRCWLNTETGFI 751
Cdd:cd15039   84 FWLNVMSFDIWRTFRGKRSSSSRSKERKRFLRYSLYAWGVPLLLVAVTIIVDfspntdslrP-GYG-EGSCWISNPWALL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 752 WSFLGPVCTVIVT---------LQInsllltwtlwilrQRLSSVNAEVSTLKDTRLLTFKAFAQLFIL-GCSWVLGIfqI 821
Cdd:cd15039  162 LYFYGPVALLLLFniilfiltaIRI-------------RKVKKETAKVQSRLRSDKQRFRLYLKLFVImGVTWILEI--I 226
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 158261825 822 GPVAG---VMAYLFTIINSLQGAFIFLIhCLLNGQVREEYKRWI 862
Cdd:cd15039  227 SWFVGgssVLWYIFDILNGLQGVFIFLI-FVCKRRVLRLLKKKI 269
7tmB2_CELSR3 cd15993
Cadherin EGF LAG seven-pass G-type receptor 3, member of the class B2 family of ...
601-859 2.19e-33

Cadherin EGF LAG seven-pass G-type receptor 3, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. Celsr3 is expressed in both the developing and adult mouse brain. It has been functionally implicated in proper neuronal migration and axon guidance in the CNS. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320659 [Multi-domain]  Cd Length: 254  Bit Score: 129.19  E-value: 2.19e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 601 SLYIISHVGIIISLVCLVLAIATFLLCRSIRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNKMGCAIIAGFLHYLFLACF 680
Cdd:cd15993    3 TLAIVTYSSVSASLAALVLTFSVLTCLRGLKSNTRGIHSNIAAALFLSELLFLLGINRTENQFLCTVVAILLHYFFLSTF 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 681 FWMLVEAVILFLMVRNLKVVNYFSsrnikMLHICAFGYGLPMLVVVISASVQPQGYGMHNRCWLNTETGFIWSFLGPVCT 760
Cdd:cd15993   83 AWLFVQGLHIYRMQTEARNVNFGA-----MRFYYAIGWGVPAIITGLAVGLDPEGYGNPDFCWISIHDKLVWSFAGPIVV 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 761 VIVTLQINSLLLTWTLWILRQRLSSVNAEVSTLKdtrlltfKAFAQLFILGCSWVLGIFQIGPVAGVMAYLFTIINSLQG 840
Cdd:cd15993  158 VIVMNGVMFLLVARMSCSPGQKETKKTSVLMTLR-------SSFLLLLLISATWLFGLLAVNNSVLAFHYLHAILCCLQG 230
                        250
                 ....*....|....*....
gi 158261825 841 AFIFLIHCLLNGQVREEYK 859
Cdd:cd15993  231 LAVLLLFCVLNEEVQEAWK 249
7tmB2_CELSR2 cd15992
Cadherin EGF LAG seven-pass G-type receptor 2, member of the class B2 family of ...
602-859 1.38e-27

Cadherin EGF LAG seven-pass G-type receptor 2, member of the class B2 family of seven-transmembrane G protein-coupled receptors; The group IV adhesion GPCRs include the cadherin EGF LAG seven-pass G-type receptors (CELSRs) and their Drosophila homolog Flamingo (also known as Starry night). These receptors are also classified as that belongs to the EGF-TM7 group of subfamily B2 adhesion GPCRs, because they contain EGF-like domains. Functionally, the group IV receptors act as key regulators of many physiological processes such as endocrine cell differentiation, neuronal migration, dendrite growth, axon, guidance, lymphatic vessel and valve formation, and planar cell polarity (PCP) during embryonic development. Three mammalian orthologs of Flamingo, Celsr1-3, are widely expressed in the nervous system from embryonic development until the adult stage. Each Celsr exhibits different expression patterns in the developing brain, suggesting that they serve distinct functions. Mutations of CELSR1 cause neural tube defects in the nervous system, while mutations of CELSR2 are associated with coronary heart disease. Moreover, CELSR1 and several other PCP signaling molecules, such as dishevelled, prickle, frizzled, have been shown to be upregulated in B lymphocytes of chronic lymphocytic leukemia patients. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. In the case of CELSR/Flamingo/Starry night, their extracellular domains comprise nine cadherin repeats linked to a series of epidermal growth factor (EGF)-like and laminin globular (G)-like domains. The cadherin repeats contain sequence motifs that mediate calcium-dependent cell-cell adhesion by homophilic interactions. Moreover, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320658  Cd Length: 255  Bit Score: 112.61  E-value: 1.38e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 602 LYIISHVGIIISLVCLVLAIATFLLCRSIRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNKMGCAIIAGFLHYLFLACFF 681
Cdd:cd15992    4 LKTLTWSSVGVTLGFLLLTFLFLLCLRALRSNKTSIRKNGATALFLSELVFILGINQADNPFACTVIAILLHFFYLCTFS 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 682 WMLVEAVILFLMVRNLKVVNYFSSRNIKMLhicafGYGLPMLVVVISASVQPQGYGMHNRCWLNTETGFIWSFLGPVCTV 761
Cdd:cd15992   84 WLFLEGLHIYRMLSEVRDINYGPMRFYYLI-----GWGVPAFITGLAVGLDPEGYGNPDFCWLSIYDTLIWSFAGPVAFA 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 762 I-VTLQINSLLLTWTLWILRQRLSSVNAEVSTLKdtrlltfKAFAQLFILGCSWVLGIFQIGPVAGVMAYLFTIINSLQG 840
Cdd:cd15992  159 VsMNVFLYILSSRASCSAQQQSFEKKKGPVSGLR-------TAFTVLLLVSVTCLLALLSVNSDVILFHYLFAGFNCLQG 231
                        250
                 ....*....|....*....
gi 158261825 841 AFIFLIHCLLNGQVREEYK 859
Cdd:cd15992  232 PFIFLSHVVLLKEVRKALK 250
7tmB2_GPR126-like_Adhesion_VIII cd15258
orphan GPR126 and related proteins, group VIII adhesion GPCRs, member of the class B2 family ...
602-860 2.38e-27

orphan GPR126 and related proteins, group VIII adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Group VIII adhesion GPCRs include orphan GPCRs such as GPR56, GPR64, GPR97, GPR112, GPR114, and GPR126. GPR56 is involved in the regulation of oligodendrocyte development and myelination in the central nervous system via coupling to G(12/13) proteins, which leads to the activation of RhoA GTPase. GPR126, on the other hand, is required for Schwann cells, but not oligodendrocyte myelination in the peripheral nervous system. Gpr64 is mainly expressed in the epididymis of male reproductive tract, and targeted deletion of GPR64 causes sperm stasis and efferent duct blockage due to abnormal fluid reabsorption, resulting in male infertility. GPR64 is also over-expressed in Ewing's sarcoma (ES), as well as upregulated in other carcinomas from kidney, prostate or lung, and promotes invasiveness and metastasis in ES via the upregulation of placental growth factor (PGF) and matrix metalloproteinase (MMP) 1. GPR97 is identified as a lymphatic adhesion receptor that is specifically expressed in lymphatic endothelium, but not in blood vascular endothelium, and is shown to regulate migration of lymphatic endothelial cells via the small GTPases RhoA and cdc42. GPR112 is specifically expressed in normal enterochromatin cells and gastrointestinal neuroendocrine carcinoma cells, but its biological function is unknown. GPR114 is mainly found in granulocytes (polymorphonuclear leukocytes), and GPR114-transfected cells induced an increase in cAMP levels via coupling to G(s) protein. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320386 [Multi-domain]  Cd Length: 267  Bit Score: 112.12  E-value: 2.38e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 602 LYIISHVGIIISLVCLVLAIATFLLCRSIR-NHNTYLHLHLCVCLLLAKTLFL--AGIHKTDNKMGCAIIAGFLHYLFLA 678
Cdd:cd15258    4 LTFISYVGCGISAIFLAITILTYIAFRKLRrDYPSKIHMNLCAALLLLNLAFLlsSWIASFGSDGLCIAVAVALHYFLLA 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 679 CFFWMLVEAVILFLMVrnLKVVNYFSSRNIkmLHICAFGYGLPMLVVVISASVQPQGYG---MHNR--------CWLNTE 747
Cdd:cd15258   84 CLTWMGLEAFHLYLLL--VKVFNTYIRRYI--LKLCLVGWGLPALLVTLVLSVRSDNYGpitIPNGegfqndsfCWIRDP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 748 TGFIWSFLGPVCtVIVTLQINSLLLTWTLWILRQRLSSVNAEVSTLKDTRLLtfkaFAQLFILGCSWVLGIFQIGPVAGV 827
Cdd:cd15258  160 VVFYITVVGYFG-LTFLFNMVMLATVLVQICRLREKAQATPRKRALHDLLTL----LGLTFLLGLTWGLAFFAWGPFNLP 234
                        250       260       270
                 ....*....|....*....|....*....|...
gi 158261825 828 MAYLFTIINSLQGAFIFLIHCLLNGQVREEYKR 860
Cdd:cd15258  235 FLYLFAIFNSLQGFFIFIWYCSMKENVRKQWRA 267
7tmB2_GPR112 cd15997
Probable G protein-coupled receptor 112, member of the class B2 family of seven-transmembrane ...
602-859 6.62e-27

Probable G protein-coupled receptor 112, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR112 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR64, GPR97, GPR114, and GPR126. GPR112 is specifically expressed in normal enterochromatin cells and gastrointestinal neuroendocrine carcinoma cells, but its biological function is unknown. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320663  Cd Length: 269  Bit Score: 110.91  E-value: 6.62e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 602 LYIISHVGIIISLVCLVLAIATFLLCRSIR-NHNTYLHLHLCVCLLLAKTLFLAGIHKTD-NKMG-CAIIAGFLHYLFLA 678
Cdd:cd15997    4 LTLITYLGCGISSIFLGITLVTYLAFEKLRrDYPSKILINLCTALLMLNLVFLLNSWLSSfNNYGlCITVAAFLHYFLLA 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 679 CFFWMLVEAVILFLM---VRNLKVVNYfssrnikMLHICAFGYGLPMLVVVISASVQPQGYG----------MHNRCWLN 745
Cdd:cd15997   84 SFTWMGLEAVHMYFAlvkVFNIYIPNY-------ILKFCIAGWGIPAVVVALVLAINKDFYGnelssdslhpSTPFCWIQ 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 746 TETGFIWSFLGPVCTV---------IVTLQINSLlltwtlwilrqrlsSVNAEVSTLKDTRLLTFKAFAQL-FILGCSWV 815
Cdd:cd15997  157 DDVVFYISVVAYFCLIflcnismfiTVLIQIRSM--------------KAKKPSRNWKQGFLHDLKSVASLtFLLGLTWG 222
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 158261825 816 LGIFQIGPVAGVMAYLFTIINSLQGAFIFLIHCLLNGQVREEYK 859
Cdd:cd15997  223 FAFFAWGPVRIFFLYLFSICNTLQGFFIFVFHCLMKENVRKQWR 266
7tmB2_GPR116-like_Adhesion_VI cd15932
orphan GPR116 and related proteins, group IV adhesion GPCRs, member of the class B2 family of ...
602-856 8.06e-27

orphan GPR116 and related proteins, group IV adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; group VI adhesion GPCRs consist of orphan receptors GPR110, GPR111, GPR113, GPR115, GPR116, and closely related proteins. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR110 possesses a SEA box in the N-terminal has been identified as an oncogene over-expressed in lung and prostate cancer. GPR113 contains a hormone binding domain and one EGF (epidermal grown factor) domain. GPR112 has extremely long N-terminus (about 2,400 amino acids) containing a number of Ser/Thr-rich glycosylation sites and a pentraxin (PTX) domain. GPR116 has two C2-set immunoglobulin-like repeats, which is found in the members of the immunoglobulin superfamily of cell surface proteins, and a SEA (sea urchin sperm protein, enterokinase, and a grin)-box, which is present in the extracellular domain of the transmembrane mucin (MUC) family and known to enhance O-glycosylation. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320598 [Multi-domain]  Cd Length: 268  Bit Score: 110.87  E-value: 8.06e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 602 LYIISHVGIIISLVCLVLAIATFLLCRS--IRNHNTYLHLHL----CVCLLLAKTLFLAGIH---KTDNKMGCAIIAGFL 672
Cdd:cd15932    4 LDYITYVGLGISILSLVLCLIIEALVWKsvTKNKTSYMRHVClvniALSLLIADIWFIIGAAistPPNPSPACTAATFFI 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 673 HYLFLACFFWMLVEAVILFLmvrNLKVVNYFSSRNIKMLHICAFGYGLPMLVVVIS-ASVQPQG-YGMHNRCWLN-TETG 749
Cdd:cd15932   84 HFFYLALFFWMLTLGLLLFY---RLVLVFHDMSKSTMMAIAFSLGYGCPLIIAIITvAATAPQGgYTRKGVCWLNwDKTK 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 750 FIWSFLGPVCTVIV----TLQINSLLLTWTLWILRQRLSSVNAEVSTLKDTRLLTFkafaqlfILGCSWVLGIFQ-IGPV 824
Cdd:cd15932  161 ALLAFVIPALAIVVvnfiILIVVIFKLLRPSVGERPSKDEKNALVQIGKSVAILTP-------LLGLTWGFGLGTmIDPK 233
                        250       260       270
                 ....*....|....*....|....*....|..
gi 158261825 825 AGVMAYLFTIINSLQGAFIFLIHCLLNGQVRE 856
Cdd:cd15932  234 SLAFHIIFAILNSFQGFFILVFGTLLDSKVRE 265
7tmB2_GPR144 cd15255
orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G ...
599-860 8.17e-27

orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR144 is an orphan receptor that belongs to the group V adhesion-GPCRs together with GPR133. The function of GPR144 has not yet been characterized, whereas GPR133 is highly expressed in the pituitary gland and is coupled to the Gs protein, leading to activation of adenylyl cyclase pathway. Moreover, genetic variations in the GPR133 have been reported to be associated with adult height and heart rate. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320383 [Multi-domain]  Cd Length: 263  Bit Score: 110.71  E-value: 8.17e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 599 DFSLYIISHVGIIISLVCLVLAIATFLLCRSIRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNKMGCAIIAGFLHYLFLA 678
Cdd:cd15255    1 EATLRTLSFIGCGVSLCALIVTFILFLAVGVPKSERTTVHKNLIFALAAAEFLLMFSEWAKGNQVACWAVTALLHLFFLA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 679 CFFWMLVEAVILFlmvRNLKVVNYFSSRNIKMLHICafGYGLPMLVVVISASVQPQGYGMHNRCWLNTETGFIWSFLGPV 758
Cdd:cd15255   81 AFSWMLVEGLLLW---SKVVAVNMSEDRRMKFYYVT--GWGLPVVIVAVTLATSFNKYVADQHCWLNVQTDIIWAFVGPV 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 759 CTVI-VTLQINSLLLTWTLWILRQRLSSVNAEVSTLKDTRLLTFKA----FAQLFILGCSWVLGIfqIGPVAGVMAYLFT 833
Cdd:cd15255  156 LFVLtVNTFVLFRVVMVTVSSARRRAKMLTPSSDLEKQIGIQIWATakpvLVLLPVLGLTWLCGV--LVHLSDVWAYVFI 233
                        250       260
                 ....*....|....*....|....*..
gi 158261825 834 IINSLQGAFIFLIHCLLNGQVREEYKR 860
Cdd:cd15255  234 TLNSFQGLYIFLVYAIYNSEVRNAIQR 260
7tmB2_GPR64 cd15444
orphan adhesion receptor GPR64 and related proteins, member of subfamily B2 of the class B ...
665-862 4.68e-25

orphan adhesion receptor GPR64 and related proteins, member of subfamily B2 of the class B secretin-like receptors of seven-transmembrane G protein-coupled receptors; GPR64 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR97, GPR112, GPR114, and GPR126. GPR64 is mainly expressed in the epididymis of male reproductive tract, and targeted deletion of GPR64 causes sperm stasis and efferent duct blockage due to abnormal fluid reabsorption, resulting in male infertility. GPR64 is also over-expressed in Ewing's sarcoma (ES), as well as upregulated in other carcinomas from kidney, prostate or lung, and promotes invasiveness and metastasis in ES via the upregulation of placental growth factor (PGF) and matrix metalloproteinase (MMP) 1. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320560 [Multi-domain]  Cd Length: 271  Bit Score: 105.68  E-value: 4.68e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 665 CAIIAGFLHYLFLACFFWMLVEAVILFLMVrnLKVVNYFSSRNIkmLHICAFGYGLPMLVVVISASVQPQGYGMHNR--- 741
Cdd:cd15444   71 CISVAVFLHYFLLVSFTWMGLEAFHMYLAL--VKVFNTYIRKYI--LKFCIVGWGVPAVVVAIVLAVSKDNYGLGSYgks 146
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 742 --------CWLNTETGFIWSFLGPVCtVIVTLQINSLLLTWTLWILRQRLSSVNAEvstlKDTRLLTFKAFAQL-FILGC 812
Cdd:cd15444  147 pngstddfCWINNNIVFYITVVGYFC-VIFLLNISMFIVVLVQLCRIKKQKQLGAQ----RKTSLQDLRSVAGItFLLGI 221
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 158261825 813 SWVLGIFQIGPVAGVMAYLFTIINSLQGAFIFLIHCLLNGQVREEYKRWI 862
Cdd:cd15444  222 TWGFAFFAWGPVNLAFMYLFAIFNTLQGFFIFIFYCVAKENVRKQWRRYL 271
7tmB1_DH_R cd15263
insect diuretic hormone receptors, member of the class B family of seven-transmembrane G ...
604-855 1.53e-23

insect diuretic hormone receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; This group includes G protein-coupled receptors that specifically bind to insect diuretic hormones found in Manduca sexta (moth) and Acheta domesticus (the house cricket), among others. Insect diuretic hormone and their GPCRs play critical roles in the regulation of water and ion balance. Thus they are attractive targets for developing new insecticides. Activation of the diuretic hormone receptors stimulate adenylate cyclase, thereby increasing cAMP levels in Malpighian tube. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of Gs family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx.


Pssm-ID: 320391 [Multi-domain]  Cd Length: 272  Bit Score: 101.29  E-value: 1.53e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 604 IISHVGIIISLVCLVLAIATFLL---CRSIRN--HNTYLHLHLCVCLLLAKTLFLAGIHKTDNKmGCAIIAGFLHYLFLA 678
Cdd:cd15263    6 TIYFIGYSLSLVALSLALWIFLYfkdLRCLRNtiHTNLMFTYILADLTWILTLTLQVSIGEDQK-SCIILVVLLHYFHLT 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 679 CFFWMLVEAVILFLMvrnlkVVNYFSSRNIKmLHICAF-GYGLPMLVVVISASV------------QPQGYGMHnrC-WL 744
Cdd:cd15263   85 NFFWMFVEGLYLYML-----VVETFSGENIK-LRVYAFiGWGIPAVVIVIWAIVkalaptapntalDPNGLLKH--CpWM 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 745 NtETGFIWSFLGPVCTVivtLQINSLLLTWTLWILRQRLSSVNAeVSTlKDTRLLTfKAFAQLF-ILGCSWVLGIFqiGP 823
Cdd:cd15263  157 A-EHIVDWIFQGPAILV---LAVNLVFLVRIMWVLITKLRSANT-VET-QQYRKAA-KALLVLIpLLGITYILVIA--GP 227
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 158261825 824 VAGVMAYLFTIIN----SLQGAFIFLIHCLLNGQVR 855
Cdd:cd15263  228 TEGIAANIFEYVRavllSTQGFTVALFYCFLNTEVR 263
7tmB1_hormone_R cd15041
The subfamily B1 of hormone receptors (secretin-like), member of the class B family ...
601-861 3.61e-22

The subfamily B1 of hormone receptors (secretin-like), member of the class B family seven-transmembrane G protein-coupled receptors; The B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of this subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. Moreover, the B1 subfamily receptors play key roles in hormone homeostasis and are promising drug targets in various human diseases including diabetes, osteoporosis, obesity, neurodegenerative conditions (Alzheimer###s and Parkinson's), cardiovascular disease, migraine, and psychiatric disorders (anxiety, depression). Furthermore, the subfamilies B2 and B3 consist of receptors that are capable of interacting with epidermal growth factors (EGF) and the Drosophila melanogaster Methuselah gene product (Mth), respectively. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 341321 [Multi-domain]  Cd Length: 273  Bit Score: 97.29  E-value: 3.61e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 601 SLYIISHVGIIISLVCLVLAIATFLLCRSIRNHNTYLHlhlcvclllaKTLFLAGIHK---------------------- 658
Cdd:cd15041    3 VVYYIYLVGYSLSLVALLPAIVIFLYFRSLRCTRIRLH----------INLFLSFILRavfwiiwdllvvydrltssgve 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 659 ---TDNKMGCAIIAGFLHYLFLACFFWMLVEAVILFlmvrNLKVVNYFSSR-NIKMLHIcaFGYGLPMLVVVISASVqpq 734
Cdd:cd15041   73 tvlMQNPVGCKLLSVLKRYFKSANYFWMLCEGLYLH----RLIVVAFFSEPsSLKLYYA--IGWGLPLVIVVIWAIV--- 143
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 735 GYGMHN-RCWL-NTETGFIWSFLGPVCTVIVT--------LQInsllltwtlwILRQRLSSVNAEVSTLKdtRLLtfKAF 804
Cdd:cd15041  144 RALLSNeSCWIsYNNGHYEWILYGPNLLALLVnlffliniLRI----------LLTKLRSHPNAEPSNYR--KAV--KAT 209
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 158261825 805 AQLF-ILGCSWVLGIFQIGPVA-GVMAYLFT--IINSLQGAFIFLIHCLLNGQVREEYKRW 861
Cdd:cd15041  210 LILIpLFGIQYLLTIYRPPDGSeGELVYEYFnaILNSSQGFFVAVIYCFLNGEVQSELKRK 270
7tmB2_BAI_Adhesion_VII cd15251
brain-specific angiogenesis inhibitors, group VII adhesion GPCRs, member of the class B2 ...
613-859 5.88e-22

brain-specific angiogenesis inhibitors, group VII adhesion GPCRs, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediate direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320379  Cd Length: 253  Bit Score: 96.17  E-value: 5.88e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 613 SLVCLVLAIATFLLCRSIRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNKMGCAIIAGFLHYLFLACFFWMLVEAVILFl 692
Cdd:cd15251   16 CLALLTLLAIYAAFWRYIRSERSIILINFCLSIISSNILILVGQTQTLNKGVCTMTAAFLHFFFLSSFCWVLTEAWQSY- 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 693 mvrnLKVVNYFSSRNIKMLHICaFGYGLPMLVVVISAS-VQPQGYGMHNRCWLNTETGFIWSFLGPVCTVIVtlqinsll 771
Cdd:cd15251   95 ----MAVTGRMRTRLIRKRFLC-LGWGLPALVVAVSVGfTRTKGYGTSSYCWLSLEGGLLYAFVGPAAAVVL-------- 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 772 ltwtlwilrqrlssVNAEVSTLKDTRL-----LTFKAFAQLF-------ILGCSWVLGIFQIGPVAGVM-AYLFTIINSL 838
Cdd:cd15251  162 --------------VNMVIGILVFNKLvsrdgISDNAMASLWsscvvlpLLALTWMSAVLAMTDRRSVLfQILFAVFDSL 227
                        250       260
                 ....*....|....*....|.
gi 158261825 839 QGAFIFLIHCLLNGQVREEYK 859
Cdd:cd15251  228 QGFVIVMVHCILRREVQDAVK 248
7tmB2_GPR113 cd15253
orphan adhesion receptor GPR113, member of the class B2 family of seven-transmembrane G ...
600-856 1.93e-21

orphan adhesion receptor GPR113, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR113 is an orphan receptor that belongs to group VI adhesion-GPCRs along with GPR110, GPR111, GPR115, and GPR116. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR113 contains a hormone binding domain and one EGF (epidermal grown factor) domain, and is primarily expressed in a subset of taste receptor cells. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320381 [Multi-domain]  Cd Length: 271  Bit Score: 95.21  E-value: 1.93e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 600 FSLYIISHVGIIISLVCLVLAIATF-LLCRS-IRNHNTY----LHLHLCVCLLLAKTLFLAGIHKTDNKMG--CAIIAGF 671
Cdd:cd15253    2 FWLDFLSQVGLGASILALLLCLGIYrLVWRSvVRNKISYfrhmTLVNIAFSLLLADTCFLGATFLSAGHESplCLAAAFL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 672 LHYLFLACFFWMLVEAVILFLMVrnLKVVNYFSSRNIKMLHIcAFGYGLPMLVVVISASV-QPQGYGMH-NRCWLNTETG 749
Cdd:cd15253   82 CHFFYLATFFWMLVQALMLFHQL--LFVFHQLAKRSVLPLMV-TLGYLCPLLIAAATVAYyYPKRQYLHeGACWLNGESG 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 750 FIWSFLGPVCTVI----VTLQINSLLLTWTLWILRQRLSSVNAEVSTLKDTRLLTfkafaqlFILGCSWVLG-IFQIGPV 824
Cdd:cd15253  159 AIYAFSIPVLAIVlvnlLVLFVVLMKLMRPSVSEGPPPEERKALLSIFKALLVLT-------PVFGLTWGLGvATLTGES 231
                        250       260       270
                 ....*....|....*....|....*....|..
gi 158261825 825 AGVMAYLFTIINSLQGAFIFLIHCLLNGQVRE 856
Cdd:cd15253  232 SQVSHYGFAILNAFQGVFILLFGCLMDKKVRE 263
7tmB2_GPR126 cd15996
orphan adhesion receptor GPR126, member of the class B2 family of seven-transmembrane G ...
665-862 1.06e-20

orphan adhesion receptor GPR126, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR126 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR56, GPR64, GPR97, GPR112, and GPR114. GPR126 is required in Schwann cells for proper differentiation and myelination via G-Protein Activation. GPR126 is believed to couple to G(s)-protein, which leads to activation of adenylate cyclase for cAMP production. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320662  Cd Length: 271  Bit Score: 93.03  E-value: 1.06e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 665 CAIIAGFLHYLFLACFFWMLVEAVILFLMVrnLKVVNYFSSRNIkmLHICAFGYGLPMLVV--VISASVQPQGYGMHNR- 741
Cdd:cd15996   70 CITVAVLLHFFLLATFTWMGLEAIHMYIAL--VKVFNTYIRRYI--LKFCIIGWGLPALIVsiVLASTNDNYGYGYYGKd 145
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 742 ---------CWLNTETGF---------IWSFLGPVCTVIVTLQInsllltwtlwilrqrlSSVNAEVS--TLKDTRLLTF 801
Cdd:cd15996  146 kdgqggdefCWIKNPVVFyvtcaayfgIMFLMNVAMFIVVMVQI----------------CGRNGKRSnrTLREEILRNL 209
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 158261825 802 KAFAQL-FILGCSWVLGIFQIGPVAGVMAYLFTIINSLQGAFIFLIHCLLNGQVREEYKRWI 862
Cdd:cd15996  210 RSVVSLtFLLGMTWGFAFFAWGPVNLAFMYLFTIFNSLQGLFIFVFHCALKENVQKQWRRHL 271
7tmB1_CRF-R cd15264
corticotropin-releasing factor receptors, member of the class B family of seven-transmembrane ...
604-860 2.26e-20

corticotropin-releasing factor receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320392 [Multi-domain]  Cd Length: 265  Bit Score: 91.71  E-value: 2.26e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 604 IISHVGIIISLVCLVLAIATFLLCRSIR-NHNTYLHLHLCVCLLLAKTLF-----LAGIHKTDNKMGCAIIAGFLHYLFL 677
Cdd:cd15264    6 IIYYLGFSISLVALAVALIIFLYFRSLRcLRNNIHCNLIVTFILRNVTWFimqntLTEIHHQSNQWVCRLIVTVYNYFQV 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 678 ACFFWMLVEAVILFLMvrnlkVVNYFSSRNIKMLHICAFGYGLPMLVVVISASVQpqgYGMHN-RCWLNTETGFIWSFL- 755
Cdd:cd15264   86 TNFFWMFVEGLYLHTM-----IVWAYSADKIRFWYYIVIGWCIPCPFVLAWAIVK---LLYENeHCWLPKSENSYYDYIy 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 756 -GPVCTVivtLQINSLLLTWTLWILRQRLSSVNAEvstlkDTRLL--TFKAFAQLF-ILGCSWVLgiFQIGPVAGVMAYL 831
Cdd:cd15264  158 qGPILLV---LLINFIFLFNIVWVLITKLRASNTL-----ETIQYrkAVKATLVLLpLLGITYML--FFINPGDDKTSRL 227
                        250       260       270
                 ....*....|....*....|....*....|....
gi 158261825 832 F-----TIINSLQGAFIFLIHCLLNGQVREEYKR 860
Cdd:cd15264  228 VfiyfnTFLQSFQGLFVAVFYCFLNGEVRSAIRK 261
7tmB2_BAI1 cd15990
brain-specific angiogenesis inhibitor 1, a group VII adhesion GPCR, member of the class B2 ...
611-859 8.96e-20

brain-specific angiogenesis inhibitor 1, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320656  Cd Length: 267  Bit Score: 90.05  E-value: 8.96e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 611 IISLVCLVLAIATFLLCRSIRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNKMGCAIIAGFLHYLFLACFFWMLVEAVIL 690
Cdd:cd15990   17 VSSLTLLLLIIIYVSVWRYIRSERSVILINFCLSIISSNALILIGQTQTRNKVVCTLVAAFLHFFFLSSFCWVLTEAWQS 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 691 FlmvrnLKVVNYFSSRNIKMLHICaFGYGLPMLVVVISAS-VQPQGYGMHNRCWLNTETGFIWSFLGPVCTVIVtlqINS 769
Cdd:cd15990   97 Y-----MAVTGRLRNRIIRKRFLC-LGWGLPALVVAISVGfTKAKGYGTVNYCWLSLEGGLLYAFVGPAAAVVL---VNM 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 770 LLLTWTLWILRQRLSSVNAEVSTLKDTRLltFKAFAQLFILGCSWVLGIFQIGP-VAGVMAYLFTIINSLQGAFIFLIHC 848
Cdd:cd15990  168 VIGILVFNKLVSKDGITDKKLKERAGASL--WSSCVVLPLLALTWMSAVLAITDrRSALFQILFAVFDSLEGFVIVMVHC 245
                        250
                 ....*....|.
gi 158261825 849 LLNGQVREEYK 859
Cdd:cd15990  246 ILRREVQDAVK 256
7tmB2_GPR97 cd15442
orphan adhesion receptor GPR97, member of the class B2 family of seven-transmembrane G ...
601-845 8.89e-18

orphan adhesion receptor GPR97, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR97 is an orphan receptor that has been classified into the group VIII of adhesion GPCRs. Other members of the Group VII include GPR56, GPR64, GPR112, GPR114, and GPR126. GPR97 is identified as a lymphatic adhesion receptor that is specifically expressed in lymphatic endothelium, but not in blood vascular endothelium, and is shown to regulate migration of lymphatic endothelial cells via the small GTPases RhoA and cdc42. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320558 [Multi-domain]  Cd Length: 277  Bit Score: 84.47  E-value: 8.89e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 601 SLYIISHVGIIISLVCLVLAIATFLLCRSIRNHNTYLHLHLCVCLLLAKTLFL-------AGIHKTDNKMGCAIIAGFLH 673
Cdd:cd15442    3 TLVTISSAGCGVSMVFLIFTIILYFFLRFTYQKFKSEDAPKIHVNLSSSLLLLnlafllnSGVSSRAHPGLCKALGGVTH 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 674 YLFLACFFWMLVEAVILFLMVrnLKVVN-YFSSRnikMLHICAFGYGLPMLVVVISASVQPQG----YGMHNR-----CW 743
Cdd:cd15442   83 YFLLCCFTWMAIEAFHLYLLA--IKVFNtYIHHY---FAKLCLVGWGFPALVVTITGSINSYGaytiMDMANRttlhlCW 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 744 LNTETG----------FIWSFL-GPVCTVIVTLQINSLlltwtlwilrQRLSSVNAEVSTLKdtRLLTFKAFAQLfiLGC 812
Cdd:cd15442  158 INSKHLtvhyitvcgyFGLTFLfNTVVLGLVAWKIFHL----------QSATAGKEKCQAWK--GGLTVLGLSCL--LGV 223
                        250       260       270
                 ....*....|....*....|....*....|...
gi 158261825 813 SWVLGIFQIGPVAGVMAYLFTIINSLQGAFIFL 845
Cdd:cd15442  224 TWGLAFFTYGSMSVPTVYIFALLNSLQGLFIFI 256
7tmB2_BAI2 cd15988
brain-specific angiogenesis inhibitor 2, a group VII adhesion GPCR, member of the class B2 ...
608-859 1.68e-17

brain-specific angiogenesis inhibitor 2, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320654 [Multi-domain]  Cd Length: 291  Bit Score: 83.85  E-value: 1.68e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 608 VGIIISLVCLVLAIATFL-LCRSIRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNKMGCAIIAGFLHYLFLACFFWMLVE 686
Cdd:cd15988   10 IGCAVSCMALLILLAIYAaFWRFIRSERSIILLNFCLSILASNILILVGQSQTLSKGVCTMTAAFLHFFFLSSFCWVLTE 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 687 AVILFlmvrnLKVVNYFSSRNIKMLHICaFGYGLPMLVVVISAS-VQPQGYGMHNRCWLNTETGFIWSFLGPVcTVIVTL 765
Cdd:cd15988   90 AWQSY-----LAVIGRMRTRLVRKRFLC-LGWGLPALVVAVSVGfTRTKGYGTASYCWLSLEGGLLYAFVGPA-AVIVLV 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 766 QINSLLLTWTLWILRQRLS----------------------SVNAEVSTLKDTRLLTFKAFAQLF-------ILGCSWVL 816
Cdd:cd15988  163 NMLIGIIVFNKLMSRDGISdkskkqragseaepcsslllkcSKCGVVSSAAMSSATASSAMASLWsscvvlpLLALTWMS 242
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 158261825 817 GIFQIGPVAGVM-AYLFTIINSLQGAFIFLIHCLLNGQVREEYK 859
Cdd:cd15988  243 AVLAMTDRRSILfQVLFAVFNSVQGFVIITVHCFLRREVQDVVK 286
7tmB2_GPR114 cd15443
orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G ...
664-859 2.11e-17

orphan adhesion receptor GPR114, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR114 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include GPR56, GPR64, GPR97, GPR112, and GPR126. GPR114 is mainly found in granulocytes (polymorphonuclear leukocytes), and GPR114-transfected cells induced an increase in cAMP levels via coupling to G(s) protein. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320559 [Multi-domain]  Cd Length: 268  Bit Score: 83.27  E-value: 2.11e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 664 GCAIIAGFLHYLFLACFFWMLVEAVILFLMVrnLKVVNYFSSRNIkmLHICAFGYGLPMLVVVISASVQPQGYGMH---- 739
Cdd:cd15443   69 LCRAAAALLHYSLLCCLTWMAIEGFHLYLLL--VKVYNIYIRRYV--LKLCVLGWGLPALIVLLVLIFKREAYGPHtipt 144
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 740 -------NRCWLNTETgfIWSFLGpVCTVIVTLQINSLLLTWTLWILRQRLSSVNA-EVSTLKDTrlLTFKAFAQLfiLG 811
Cdd:cd15443  145 gtgyqnaSMCWITSSK--VHYVLV-LGYAGLTSLFNLVVLAWVVRMLRRLRSRKQElGERARRDW--VTVLGLTCL--LG 217
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 158261825 812 CSWVLGIFQIGPVAGVMAYLFTIINSLQGAFIFLIHCLLNGQVREEYK 859
Cdd:cd15443  218 TTWALAFFSFGVFLIPQLFLFTIINSLYGFFICLWYCTQRRRSDASAK 265
7tmB2_GPR56 cd15995
orphan adhesion receptor GPR56, member of the class B2 family of seven-transmembrane G ...
602-856 8.10e-17

orphan adhesion receptor GPR56, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR56 is an orphan receptor that has been classified as that belongs to the Group VIII of adhesion GPCRs. Other members of the Group VII include orphan GPCRs such as GPR64, GPR97, GPR112, GPR114, and GPR126. GPR56 is involved in the regulation of oligodendrocyte development and myelination in the central nervous system via coupling to G(12/13) proteins, which leads to the activation of RhoA GTPase. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320661  Cd Length: 269  Bit Score: 81.41  E-value: 8.10e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 602 LYIISHVGIIISLVCLVLAIAtFLLC--RSIRNHNTYLHLHLCVCLLLAKTLFLAGIH--KTDNKMGCAIIAGFLHYLFL 677
Cdd:cd15995    4 LTILTYVGCIISALASVFTIA-FYLCsrRKPRDYTIYVHMNLLLAIFLLDTSFLISEPlaLTGSEAACRAGGMFLHFSLL 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 678 ACFFWMLVEAVILFLMVrnLKVVNYFSSRNIkmLHICAFGYGLPMLVVVISASVQPQGYGMHNRCWLNTETGFIWSflgP 757
Cdd:cd15995   83 ACLTWMGIEGYNLYRLV--VEVFNTYVPHFL--LKLCAVGWGLPIFLVTLIFLVDQDNYGPIILAVHRSPEKVTYA---T 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 758 VCTVIVTLQINSLLLTWTLWILRQRLSSVNAEVSTLKDTRLLTFKAFAQLFILGCSWVLGI--------FQIGPVAGVMA 829
Cdd:cd15995  156 ICWITDSLISNITNLGLFSLVFLFNMAMLATMVVEILRLRPRTHKWSHVLTLLGLSLVLGIpwalaffsFASGTFQLVIV 235
                        250       260
                 ....*....|....*....|....*..
gi 158261825 830 YLFTIINSLQGAFIFLIHCLLNGQVRE 856
Cdd:cd15995  236 YLFTIINSLQGFLIFLWYWSMVLQARG 262
7tmB2_BAI3 cd15989
brain-specific angiogenesis inhibitor 3, a group VII adhesion GPCR, member of the class B2 ...
614-859 1.37e-16

brain-specific angiogenesis inhibitor 3, a group VII adhesion GPCR, member of the class B2 family of seven-transmembrane G protein-coupled receptors; Brain-specific angiogenesis inhibitors (BAI1-3) constitute the group VII of cell-adhesion receptors that have been implicated in vascularization of glioblastomas. They belong to the B2 subfamily of class B GPCRs, are predominantly expressed in the brain, and are only present in vertebrates. Three BAIs, like all adhesion receptors, are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. For example, BAI1 N-terminus contain an integrin-binding RGD (Arg-Gly-Asp) motif in addition to five thrombospondin type 1 repeats (TSRs), which are known to regulate the anti-angiogenic activity of thrombospondin-1, whereas BAI2 and BAI3 have four TSRs, but do not possess RGD motifs. The TSRs are functionally involved in cell attachment, activation of latent TGF-beta, inhibition of angiogenesis and endothelial cell migration. The TSRs of BAI1 mediates direct binding to phosphatidylserine, which enables both recognition and internalization of apoptotic cells by phagocytes. Thus, BAI1 functions as a phosphatidylserine receptor that forms a trimeric complex with ELMO and Dock180, leading to activation of Rac-GTPase which promotes the binding and phagocytosis of apoptotic cells. BAI3 can also interact with the ELMO-Dock180 complex to activate the Rac pathway and can also bind to secreted C1ql proteins of the C1Q complement family via its N-terminal TSRs. BAI3 and its ligands C1QL1 are highly expressed during synaptogenesis and are involved in synapse specificity. Moreover, BAI2 acts as a transcription repressor to regulate vascular endothelial growth factor (VEGF) expression through interaction with GA-binding protein gamma (GABP). The N-terminal extracellular domains of all three BAIs also contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain, which undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif to generate N- and C-terminal fragments (NTF and CTF), a putative hormone-binding domain (HBD), and multiple N-glycosylation sites. The C-terminus of each BAI subtype ends with a conserved Gln-Thr-Glu-Val (QTEV) motif known to interact with PDZ domain-containing proteins, but only BAI1 possesses a proline-rich region, which may be involved in protein-protein interactions.


Pssm-ID: 320655 [Multi-domain]  Cd Length: 293  Bit Score: 81.27  E-value: 1.37e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 614 LVCLVLAIATFLLCRSIRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNKMGCAIIAGFLHYLFLACFFWMLVEAVILFlm 693
Cdd:cd15989   19 LALITLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKGICTMTTAFLHFFFLASFCWVLTEAWQSY-- 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 694 vrnLKVVNYFSSRNIKMLHICaFGYGLPMLVVVISAS-VQPQGYGMHNRCWLNTETGFIWSFLGPVCTVIVT------LQ 766
Cdd:cd15989   97 ---MAVTGKIRTRLIRKRFLC-LGWGLPALVVAISMGfTKAKGYGTPHYCWLSLEGGLLYAFVGPAAAVVLVnmvigiLV 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 767 INSLLLTWTLWILRQR----------------------LSSVNAEVSTLKDTRLLTFKAFAQLFILGCSWVLGIFQIGPV 824
Cdd:cd15989  173 FNKLVSRDGILDKKLKhragqmsephsgltlkcakcgvVSTTALSATTASNAMASLWSSCVVLPLLALTWMSAVLAMTDK 252
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 158261825 825 AGVM-AYLFTIINSLQGAFIFLIHCLLNGQVREEYK 859
Cdd:cd15989  253 RSILfQILFAVFDSLQGFVIVMVHCILRREVQDAFR 288
7tmB2_GPR128 cd15257
orphan adhesion receptor GPR128, member of the class B2 family of seven-transmembrane G ...
599-846 3.84e-16

orphan adhesion receptor GPR128, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR128 is an orphan receptor of the adhesion family (subclass B2) that belongs to the class B GPCRs. Expression of GPR128 was detected in the mouse intestinal mucosa and is thought to be involved in energy balance, as its knockout mice showed a decrease in body weight gain and an increase in intestinal contraction frequency compared to wild-type controls. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. These include, for example, EGF (epidermal growth factor)-like domains in CD97, Celsr1 (cadherin family member), Celsr2, Celsr3, EMR1 (EGF-module-containing mucin-like hormone receptor-like 1), EMR2, EMR3, and Flamingo; two laminin A G-type repeats and nine cadherin domains in Flamingo and its human orthologs Celsr1, Celsr2 and Celsr3; olfactomedin-like domains in the latrotoxin receptors; and five or four thrombospondin type 1 repeats in BAI1 (brain-specific angiogenesis inhibitor 1), BAI2 and BAI3. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions.


Pssm-ID: 320385 [Multi-domain]  Cd Length: 303  Bit Score: 80.30  E-value: 3.84e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 599 DFSLYIISHVGIIISLVCLVLAIATFLLCRSIRNHN-TYLHLHLCVCLLLAKTLFLAGIHKTDNKMG------------- 664
Cdd:cd15257    1 AKTLDIISTIGCVLSIAGLVITIIFHLHTRKLRKSSvTWVLLNLCSSLLLFNIIFTSGVENTNNDYEistvpdretntvl 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 665 ------------CAIIAGFLHYLFLACFFWMLVEAVILFLMVRNLkvvnYFSSRNIKMLHICAFGYGLPMLVVVI----- 727
Cdd:cd15257   81 lseeyvepdtdvCTAVAALLHYFLLVTFMWNAVYSAQLYLLLIRM----MKPLPEMFILQASAIGWGIPAVVVAItlgat 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 728 -----SASVQPQGYGMHNRCWL-------NTETGFIWSFLGPV------CTVIVTLQINSLLLTWTLWILRQRLSSVNAE 789
Cdd:cd15257  157 yrfptSLPVFTRTYRQEEFCWLaaldknfDIKKPLLWGFLLPVglilitNVILFIMTSQKVLKKNNKKLTTKKRSYMKKI 236
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 790 VSTlkdtrlltfkaFAQLFILGCSWVLGIFQI---GPVAGVMAYLFTIINSLQGAFIFLI 846
Cdd:cd15257  237 YIT-----------VSVAVVFGITWILGYLMLvnnDLSKLVFSYIFCITNTTQGVQIFIL 285
7tmB2_GPR124-like_Adhesion_III cd15259
orphan GPR124 and related proteins, group III adhesion GPCRs, member of class B2 family of ...
599-860 1.13e-14

orphan GPR124 and related proteins, group III adhesion GPCRs, member of class B2 family of seven-transmembrane G protein-coupled receptors; group III adhesion GPCRs include orphan GPR123, GPR124, GPR125, and their closely related proteins. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in cell-cell adhesion and cell-matrix interactions, that are coupled to a class B seven-transmembrane domain. Furthermore, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR- autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. GPR123 is predominantly expressed in the CNS including thalamus, brain stem and regions containing large pyramidal cells. GPR124, also known as tumor endothelial marker 5 (TEM5), is highly expressed in tumor vessels and in the vasculature of the developing embryo. GPR124 is essentially required for proper angiogenic sprouting into neural tissue, CNS-specific vascularization, and formation of the blood-brain barrier. GPR124 also interacts with the PDZ domain of DLG1 (discs large homolog 1) through its PDZ-binding motif. Recently, studies of double-knockout mice showed that GPR124 functions as a co-activator of Wnt7a/Wnt7b-dependent beta-catenin signaling in brain endothelium. Furthermore, WNT7-stimulated beta-catenin signaling is regulated by GPR124's intracellular PDZ binding motif and leucine-rich repeats (LRR) in its N-terminal extracellular domain. GPR125 directly interacts with dishevelled (Dvl) via its intracellular C-terminus, and together, GPR125 and Dvl recruit a subset of planar cell polarity (PCP) components into membrane subdomains, a prerequisite for activation of Wnt/PCP signaling. Thus, GPR125 influences the noncanonical WNT/PCP pathway, which does not involve beta-catenin, through interacting with and modulating the distribution of Dvl.


Pssm-ID: 320387 [Multi-domain]  Cd Length: 260  Bit Score: 75.10  E-value: 1.13e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 599 DFSLYIISHVGIIISLVCLVLAIATFLLCRS---IRNHNTYLHLHLCVCLLLAKTLFLAGIHKTDNKMGCAIIAGFLHYL 675
Cdd:cd15259    1 FELLHPVVYAGAALCLLCLLATIITYIVFHRlirISRKGRHMLVNLCLHLLLTCVVFVGGINRTANQLVCQAVGILLHYS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 676 FLACFFWMLVEA-VILFLMVRNLKVVNYFSSRNIK---MLHICAFGYGLPMLVVVISASVQPQGYGMHNRCWLNTETgFI 751
Cdd:cd15259   81 TLCTLLWVGVTArNMYKQVTKTAKPPQDEDQPPRPpkpMLRFYLIGWGIPLIICGITAAVNLDNYSTYDYCWLAWDP-SL 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 752 WSFLGPVCTVIVtlqINSLLLTWTLWILRQRLSSVNAEVSTLKDTRLLtfkaFAQLFILGCSWVLGIFqigPVAGVMAYL 831
Cdd:cd15259  160 GAFYGPAALIVL---VNCIYFLRIYCQLKGAPVSFQSQLRGAVITLFL----YVAMWACGALAVSQRY---FLDLVFSCL 229
                        250       260
                 ....*....|....*....|....*....
gi 158261825 832 FTIINSLQGAFIFLIHCLLNGQVREEYKR 860
Cdd:cd15259  230 YGATCSSLGLFVLIHHCLSREDVRQSWRQ 258
7tmB2_GPR116_Ig-Hepta cd15254
The immunoglobulin-repeat-containing receptor Ig-hepta/GPR116, member of the class B2 family ...
602-856 6.97e-14

The immunoglobulin-repeat-containing receptor Ig-hepta/GPR116, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR116 (also known as Ig-hepta) is an orphan receptor that belongs to group VI adhesion-GPCRs along with GPR110, GPR111, GPR113, and GPR115. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. GPR116 has four I-set immunoglobulin-like repeats, which is found in the members of the immunoglobulin superfamily of cell surface proteins, and a SEA (sea urchin sperm protein, enterokinase, and a grin)-box, which is present in the extracellular domain of the transmembrane mucin (MUC) family and known to enhance O-glycosylation. GPR116 is highly expressed in fetal and adult lung, and it has been shown to regulate lung surfactant levels as well as to stimulate breast cancer metastasis through a G(q)-p63-RhoGEF-Rho GTPase signaling pathway. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS.


Pssm-ID: 320382 [Multi-domain]  Cd Length: 275  Bit Score: 72.91  E-value: 6.97e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 602 LYIISHVGIIISLVCLVLAIATFLLCRSIRNHNTYLHLHLCVCLLLAKTLFLAGI-----------HKTDNKMGCAIIAG 670
Cdd:cd15254    4 LDYITYIGLSISILSLAICIVIESLVWKSVTKNRTSYMRHVCILNIAVSLLIADIwfivvaaiqdqNYAVNGNVCVAATF 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 671 FLHYLFLACFFWMLVEAVILFLmvrNLKVVNYFSSRNIKMLHICAFGYGLPMLVVVIS-ASVQPQ-GYGMHNRCWLNTE- 747
Cdd:cd15254   84 FIHFFYLCVFFWMLALGLMLFY---RLVFILHDTSKTIQKAVAFCLGYGCPLIISVITiAVTLPRdSYTRKKVCWLNWEd 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 748 TGFIWSFLGPVCTVIVtlqINSLLLTWTLWILRQRL---SSVNAEVSTL----KDTRLLTfkafaqlFILGCSWVLGIFQ 820
Cdd:cd15254  161 SKALLAFVIPALIIVA---VNSIITVVVIVKILRPSigeKPSKQERSSLfqiiKSIGVLT-------PLLGLTWGFGLAT 230
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 158261825 821 IGPVAG-VMAYLFTIINSLQGAFIFLIHCLLNGQVRE 856
Cdd:cd15254  231 VIKGSSiVFHILFTLLNAFQGLFILVFGTLWDKKVQE 267
7tmB2_GPR111_115 cd15994
orphan adhesion receptors GPR111 and GPR115, member of the class B2 family of ...
605-856 4.41e-12

orphan adhesion receptors GPR111 and GPR115, member of the class B2 family of seven-transmembrane G protein-coupled receptors; GPR111 and GPR115 are highly homologous orphan receptors that belong to group VI adhesion-GPCRs along with GPR110, GPR113, and GPR116. The adhesion receptors are characterized by the presence of large N-terminal extracellular domains containing multiple adhesion motifs, which play critical roles in ligand recognition as well as cell-cell adhesion and cell-matrix interactions, linked by a stalk region to a class B seven-transmembrane domain. In addition, almost all adhesion receptors, except GPR123, contain an evolutionarily conserved GPCR-autoproteolysis inducing (GAIN) domain that undergoes autoproteolytic processing at the GPCR proteolysis site (GPS) motif located immediately N-terminal to the first transmembrane region, to generate N- and C-terminal fragments (NTF and CTF), which may serve important biological functions. However, several adhesion GPCRs, including GPR 111, GPR115, and CELSR1, are predicted to be non-cleavable at the GAIN domain because of the lack of a consensus catalytic triad sequence (His-Leu-Ser/Thr) within their GPS. Both GPR111 and GPR5 are present only in land-living animals and are predominantly expressed in the developing skin.


Pssm-ID: 320660 [Multi-domain]  Cd Length: 267  Bit Score: 67.56  E-value: 4.41e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 605 ISHVGIIISLVCLVL--AIATFLLCRSIRNHNTYL----HLHLCVCLLLAKTLFLAGIH---KTDNKMGCAIIAGFLHYL 675
Cdd:cd15994    7 ITRIGLGLSIFSLALclTIEAVVWSHVTKTEITYMrhvcIVNIATSLLIADVWFILASIvhnTALNYPLCVAATFFLHFF 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 676 FLACFFWMLVEAVilfLMVRNLKVVNYFSSRNIKMLHICAFGYGLPMLVVVIS-ASVQP-QGYGMHNRCWLN-TETGFIW 752
Cdd:cd15994   87 YLSLFFWMLTKAL---LILYGILLVFFKITKSVFIATAFSIGYGCPLVIAVLTvAITEPkKGYLRPEACWLNwDETKALL 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 753 SFLGP------VCTVIVTLQINSLLLTWTLWILRQRLSSVnaeVSTLKDTRLLTfkafaqlFILGCSWVLGIFQIGPVAG 826
Cdd:cd15994  164 AFIIPalsivvVNLIVVGVVVVKTQRSSIGESCKQDVSNI---IRISKNVAILT-------PLLGLTWGFGLATIIDSRS 233
                        250       260       270
                 ....*....|....*....|....*....|.
gi 158261825 827 VMAYL-FTIINSLQGAFIFLIHCLLNGQVRE 856
Cdd:cd15994  234 LPFHIiFALLNAFQGFFILLFGTILDRKIRI 264
GPS smart00303
G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin ...
546-595 1.50e-11

G-protein-coupled receptor proteolytic site domain; Present in latrophilin/CL-1, sea urchin REJ and polycystin.


Pssm-ID: 197639  Cd Length: 49  Bit Score: 60.09  E-value: 1.50e-11
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|
gi 158261825   546 ERPICVSWSTDVkgGRWTSFGCVILEASETYTICSCNQMANLAVIMASGE 595
Cdd:smart00303   1 FNPICVFWDESS--GEWSTRGCELLETNGTHTTCSCNHLTTFAVLMDVPP 48
7tmB1_GHRHR2 cd15271
growth-hormone-releasing hormone receptor type 2, member of the class B family of ...
604-860 1.61e-09

growth-hormone-releasing hormone receptor type 2, member of the class B family of seven-transmembrane G protein-coupled receptors; Growth hormone-releasing hormone receptor type 2 (GHRHR2) is found in non-mammalian vertebrates such as chicken and frog. It is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, pituitary adenylate cyclase activating polypeptide (PACAP), vasoactive intestinal peptide, and mammalian growth hormone-releasing hormone. These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. Mammalian GHRHR is a specific receptor for the growth hormone-releasing hormone (GHRH) that controls the synthesis and release of growth hormone (GH) from the anterior pituitary somatotrophs. Mutations in the gene encoding GHRHR have been connected to isolated growth hormone deficiency (IGHD), a short-stature condition caused by deficient production of GH or lack of GH action. Mammalian GHRH is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. GHRHR is found in mammals as well as zebrafish and chicken, whereas the GHRHR type 2, an ortholog of the GHRHR, has only been identified in ray-finned fish, chicken and Xenopus. Xenopus laevis GHRHR2 has been shown to interact with both endogenous GHRH and PACAP-related peptide (PRP).


Pssm-ID: 320399 [Multi-domain]  Cd Length: 267  Bit Score: 59.74  E-value: 1.61e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 604 IISHVGIIISLVCLVLAIATFLLCRSI---RNH---NTYLHLHLCVCLLLAKTLFLAGIHKTD----NKMGCAIIAGFLH 673
Cdd:cd15271    6 LLYTVGYGTSLTSLITAVLIFCTFRKLhctRNYihiNLFVSFILRALAVFIKDAVLFADESVDhctmSTVACKAAVTFFQ 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 674 YLFLACFFWMLVEAVILflmvRNLKVVNYFSSRNIKMLHIcAFGYGLPMLVVVISASVQPQgygMHNR-CWLNTETGFIW 752
Cdd:cd15271   86 FCVLANFFWLLVEGMYL----QTLLLLTFTSDRKYFWWYI-LIGWGAPSVTVTVWVLTRLQ---YDNRgCWDDLESRIWW 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 753 SFLGPvctVIVTLQINSLLLTWTLWILRQRLSSVNAEVSTLKDTRLLTFKAFAQLFILGCSWVLGIF---QIGpvAGVMA 829
Cdd:cd15271  158 IIKTP---ILLSVFVNFLIFINVIRILVQKLKSPDVGGNDTSHYMRLAKSTLLLIPLFGVHYVVFAFfpeHVG--VEARL 232
                        250       260       270
                 ....*....|....*....|....*....|.
gi 158261825 830 YLFTIINSLQGAFIFLIHCLLNGQVREEYKR 860
Cdd:cd15271  233 YFELVLGSFQGFIVALLYCFLNGEVQAEIKK 263
7tmB1_NPR_B4_insect-like cd15260
insect neuropeptide receptor subgroup B4 and related proteins, member of the class B family of ...
660-768 1.72e-09

insect neuropeptide receptor subgroup B4 and related proteins, member of the class B family of seven-transmembrane G protein-coupled receptors; This subgroup includes a neuropeptide receptor found in Nilaparvata lugens (brown planthopper) and its closely related proteins from mollusks and annelid worms. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 320388 [Multi-domain]  Cd Length: 267  Bit Score: 59.59  E-value: 1.72e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 660 DNKMGCAIIAGFLHYLFLACFFWMLVEAVILFLMVrnlkvVNYFSSRNIKMLHICAFGYGLPMLVVVISASVQPQGYGMH 739
Cdd:cd15260   70 ENPIWCQALHVLLQYFMVCNYFWMFCEGLYLHTVL-----VVAFISEKSLMRWFIAIGWGVPLVITAIYAGVRASLPDDT 144
                         90       100
                 ....*....|....*....|....*....
gi 158261825 740 NRCWLNtETGFIWSFLGPVCtviVTLQIN 768
Cdd:cd15260  145 ERCWME-ESSYQWILIVPVV---LSLLIN 169
7tmB1_PTH1R cd15984
parathyroid hormone 1 receptor, member of the class B family of seven-transmembrane G ...
663-860 1.73e-09

parathyroid hormone 1 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone (PTH) receptor family has three subtypes: PTH1R, PTH2R and PTH3R. PTH1R is expressed in bone and kidney and is activated by two polypeptide ligands: PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH1R couples predominantly to G(s)-protein that in turn activates adenylate cyclase thereby producing cAMP, but it can also couple to several G protein subtypes, including G(q/11), G(i/o), and G(12/13), resulting in activation of multiple intracellular signaling pathways. PTH1R is found in all vertebrate species, whereas PTH2R is found in mammals and fish, but not in chicken or frog. PTH3R is found in chicken and fish, but it is absent in mammals. The PTH receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


Pssm-ID: 320650 [Multi-domain]  Cd Length: 290  Bit Score: 59.96  E-value: 1.73e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 663 MGCAIIAGFLHYLFLACFFWMLVEAvilfLMVRNLKVVNYFSSRNIkMLHICAFGYGLPMLVVVISASVQpqGYGMHNRC 742
Cdd:cd15984   93 VGCKVAVTFFLYFLATNYYWILVEG----LYLHSLIFMAFFSEKKY-LWGFTLFGWGLPAVFVTIWASVR--ATLADTGC 165
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 743 WLNTETGFIWSFLGPVCTVIVtlqINSLLLTWTLWILRQRLSSVNA-EVSTLKDTRLLTFKAFAQLFILGCSWVlgIFQI 821
Cdd:cd15984  166 WDLSAGNLKWIIQVPILAAIV---VNFILFINIVRVLATKLRETNAgRCDTRQQYRKLLKSTLVLMPLFGVHYI--VFMA 240
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*.
gi 158261825 822 GPVAGVMAYLFTI-------INSLQGAFIFLIHCLLNGQVREEYKR 860
Cdd:cd15984  241 MPYTEVSGILWQVqmhyemlFNSFQGFFVAIIYCFCNGEVQAEIKK 286
7tmB1_PTHR cd15265
parathyroid hormone receptors, member of the class B family of seven-transmembrane G ...
601-860 1.91e-09

parathyroid hormone receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone (PTH) receptor family has three subtypes: PTH1R, PTH2R and PTH3R. PTH1R is expressed in bone and kidney and is activated by two polypeptide ligands: PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH1R couples predominantly to a G(s)-protein that in turn activates adenylate cyclase thereby producing cAMP, but it can also couple to several G protein subtypes, including G(q/11), G(i/o), and G(12/13), resulting in activation of multiple intracellular signaling pathways. PTH2R is potently activated by tuberoinfundibular peptide-39 (TIP-39), but not by PTHrP. PTH also strongly activates human PTH2R, but only weakly activates rat and zebrafish PTH2Rs, suggesting that TIP-39 is a natural ligand for PTH2R. On the other hand, PTH3R binds and responds to both PTH and PTHrP, but not the TIP-39. Moreover, the PTH3R is more closely related to the PTH1R than PTH2R. PTH1R is found in all vertebrate species, whereas PTH2R is found in mammals and fish, but not in chicken or frog. The PTH3R is found in chicken and fish, but it is absent in mammals. The PTH receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


Pssm-ID: 320393 [Multi-domain]  Cd Length: 289  Bit Score: 59.70  E-value: 1.91e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 601 SLYIISHVGIIISLVCLVLAIatFLLCRSIRNHNT--Y----------------------------LHLHLCVCLLLAKT 650
Cdd:cd15265    3 RLYLIYTVGYSISLVSLTVAV--FILGYFRRLHCTrnYihmhlfvsfmlravsifvkdavlysgsgLDELERPSMEDLKS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 651 LFLAGIHKTDNKMGCAIIAGFLHYLFLACFFWMLVEAviLFLmvRNLKVVNYFSSRNIKMLHIcAFGYGLPMLVVVISAS 730
Cdd:cd15265   81 IVEAPPVDKSQYVGCKVAVTLFLYFLATNYYWILVEG--LYL--HSLIFMAFFSDKKYLWGFT-LIGWGFPAVFVIPWAS 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 731 VQPQgyGMHNRCWLNTETGFIWSFLGPVCTVIVtlqINSLLLTWTLWILRQRLSSVNA-EVSTLKDTRLLTFKAFAQLFI 809
Cdd:cd15265  156 VRAT--LADTRCWDLSAGNYKWIYQVPILAAIV---VNFILFLNIVRVLATKLRETNAgRCDTRQQYRKLAKSTLVLIPL 230
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 158261825 810 LGCSWVLGI----FQIGPVAGVMAYLFTIINSLQGAFIFLIHCLLNGQVREEYKR 860
Cdd:cd15265  231 FGVHYIVFMgmpyTEVGLLWQIRMHYELFFNSFQGFFVAIIYCFCNGEVQAEIKK 285
7tmB1_Secretin_R-like cd15930
secretin receptor-like group of hormone receptors, member of the class B family of ...
601-860 2.25e-09

secretin receptor-like group of hormone receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; This group represents G protein-coupled receptors for structurally similar peptide hormones that include secretin, growth-hormone-releasing hormone (GHRH), pituitary adenylate cyclase activating polypeptide (PACAP), and vasoactive intestinal peptide (VIP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. Secretin, a polypeptide secreted by entero-endocrine S cells in the small intestine, is involved in maintaining body fluid balance. This polypeptide regulates the secretion of bile and bicarbonate into the duodenum from the pancreatic and biliary ducts, as well as regulates the duodenal pH by the control of gastric acid secretion. Studies with secretin receptor-null mice indicate that secretin plays a role in regulating renal water reabsorption. Secretin mediates its biological actions by elevating intracellular cAMP via G protein-coupled secretin receptors, which are expressed in the brain, pancreas, stomach, kidney, and liver. GHRHR is a specific receptor for the growth hormone-releasing hormone (GHRH) that controls the synthesis and release of growth hormone (GH) from the anterior pituitary somatotrophs. Mutations in the gene encoding GHRHR have been connected to isolated growth hormone deficiency (IGHD), a short-stature condition caused by deficient production of GH or lack of GH action. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. All B1 subfamily GPCRs are able to increase intracellular cAMP levels by coupling to adenylate cyclase via a stimulatory Gs protein. However, depending on its cellular location, some members of subfamily B1 are also capable of coupling to additional G proteins such as G(i/o) and/or G(q) proteins, thereby leading to activation of phospholipase C and intracellular calcium influx.


Pssm-ID: 320596 [Multi-domain]  Cd Length: 268  Bit Score: 59.37  E-value: 2.25e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 601 SLYIISHVGIIISLVCLVLAIATFLLCRSI---RNH---NTYLHLHLCVCLLLAK--TLFLAG--IHKTDNKMGCAIIAG 670
Cdd:cd15930    3 TVKIIYTVGYSLSLTSLTTAMIILCLFRKLhctRNYihmNLFVSFILRAIAVFIKdaVLFSSEdvDHCFVSTVGCKASMV 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 671 FLHYLFLACFFWMLVEAVILFlmvrNLKVVNYFSSRNIKMLHIcAFGYGLPMLVVVISASVQPqgYGMHNRCW-LNTETG 749
Cdd:cd15930   83 FFQYCVMANFFWLLVEGLYLH----TLLVISFFSERRYFWWYV-LIGWGAPTVFVTVWIVARL--YFEDTGCWdINDESP 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 750 FIWSFLGPvctVIVTLQINSLLLTWTLWILRQRLSS--VNAEVST----LKDTRLLTFKAFAQLFIlgcswVLGIFQIGP 823
Cdd:cd15930  156 YWWIIKGP---ILISILVNFVLFINIIRILLQKLRSpdIGGNESSqykrLARSTLLLIPLFGIHYI-----VFAFFPENI 227
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 158261825 824 VAGVMAYLFTIINSLQGAFIFLIHCLLNGQVREEYKR 860
Cdd:cd15930  228 SLGIRLYFELCLGSFQGFVVAVLYCFLNGEVQAEIKR 264
7tmB1_NPR_B7_insect-like cd15273
insect neuropeptide receptor subgroup B7 and related proteins, member of the class B family of ...
604-860 2.28e-09

insect neuropeptide receptor subgroup B7 and related proteins, member of the class B family of seven-transmembrane G protein-coupled receptors; This subgroup includes a neuropeptide receptor found in Nilaparvata lugens (brown planthopper) and its closely related proteins from invertebrates. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 320401 [Multi-domain]  Cd Length: 285  Bit Score: 59.31  E-value: 2.28e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 604 IISHVGIIISLVCLVLAIATFLLCRSIRN-HNTYLHLHLCVCLLLA------KTLFLAG-----------------IHKT 659
Cdd:cd15273    6 GISQIGYIVSLITLIIAFAIFLSFKKLHCaRNKLHMHLFASFILRAfmtllkDSLFIDGlglladiverngggnevIANI 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 660 DNKMGCAIIAGFLHYLFLACFFWMLVEAVILflmvRNLKVVNYFSSRNIKMLHIcAFGYGLPMLVVVISASVQpqgYGMH 739
Cdd:cd15273   86 GSNWVCKAITSLWQYFIIANYSWILMEGLYL----HNLIFLALFSDENNIILYI-LLGWGLPLIFVVPWIVAR---ILFE 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 740 NR-CWLNTETGFIWSFL-GPvctVIVTLQINsllLTWTLWILRQRLSSVNAEVStlkdTRLLTFKAFAQ-------LF-- 808
Cdd:cd15273  158 NSlCWTTNSNLLNFLIIrIP---IMISVLIN---FILFLNIVRVLLVKLRSSVN----EDSRRYKKWAKstlvlvpLFgv 227
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 158261825 809 ----ILGCSWVLGIFQIGPVagvmAYLFT--IINSLQGAFIFLIHCLLNGQVREEYKR 860
Cdd:cd15273  228 hytiFLILSYLDDTNEAVEL----IWLFCdqLFASFQGFFVALLYCFLNGEVRAEIQR 281
7tmB1_CRF-R1 cd15445
corticotropin-releasing factor receptor 1, member of the class B family of seven-transmembrane ...
604-861 2.29e-09

corticotropin-releasing factor receptor 1, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320561 [Multi-domain]  Cd Length: 265  Bit Score: 59.18  E-value: 2.29e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 604 IISHVGIIISLVCLVLAIATFLLCRSIRN-HNTYLHLHLCVCLLLAKTLFLAG------IHKTdNKMGCAIIAGFLHYLF 676
Cdd:cd15445    6 IINYLGHCISLVALLVAFVLFLRLRSIRClRNIIHWNLITAFILRNATWFVVQltmspeVHQS-NVVWCRLVTAAYNYFH 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 677 LACFFWMLVEAVILFLMVrnlkVVNYFSSRNIKMLHICaFGYGLPMLVVVisASVQPQGYGMHNRCWLNTETGFIWSFL- 755
Cdd:cd15445   85 VTNFFWMFGEGCYLHTAI----VLTYSTDKLRKWMFIC-IGWCIPFPIIV--AWAIGKLYYDNEKCWFGKRAGVYTDYIy 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 756 -GPvctVIVTLQINSLLLTWTLwilrqRLSSVNAEVSTLKDT---RLLTFKAFAQLFILGCSWVLgiFQIGPVAG----- 826
Cdd:cd15445  158 qGP---MILVLLINFIFLFNIV-----RILMTKLRASTTSETiqyRKAVKATLVLLPLLGITYML--FFVNPGEDeisri 227
                        250       260       270
                 ....*....|....*....|....*....|....*.
gi 158261825 827 VMAYLFTIINSLQGAFIFLIHCLLNGQVREEY-KRW 861
Cdd:cd15445  228 VFIYFNSFLESFQGFFVSVFYCFLNSEVRSAVrKRW 263
7tmB1_GlucagonR-like cd15929
glucagon receptor-like subfamily, member of the class B family of seven-transmembrane G ...
601-860 7.52e-09

glucagon receptor-like subfamily, member of the class B family of seven-transmembrane G protein-coupled receptors; This group represents the glucagon receptor family of G protein-coupled receptors, which includes glucagon receptor (GCGR), glucagon-like peptide-1 receptor (GLP1R), GLP2R, and closely related receptors. These receptors are activated by the members of the glucagon (GCG) peptide family including GCG, glucagon-like peptide 1 (GLP1), and GLP2, which are derived from the large proglucagon precursor. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. Receptors in this group belong to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 341353 [Multi-domain]  Cd Length: 279  Bit Score: 57.83  E-value: 7.52e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 601 SLYIISHVGIIISLVCLVLAIATFLLCRSI---RNH---NTYLHLHLCVCLLLAKTLFLAGIHKTD-----------NKM 663
Cdd:cd15929    3 SLQVMYTVGYSLSLAALVLALAILLGLRKLhctRNYihaNLFASFILRALSVLVKDALLPRRYSQKgdqdlwstllsNQA 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 664 --GCAIIAGFLHYLFLACFFWMLVEAVILFlmvrNLKVVNYFSSRNIKMLHIcAFGYGLPMLVVVISASVQpqgYGMHN- 740
Cdd:cd15929   83 slGCRVAQVLMQYCVAANYYWLLVEGLYLH----TLLVLAVFSERSIFRLYL-LLGWGAPVLFVVPWGIVK---YLYENt 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 741 RCW-LNTETGFIWSFLGPVC-TVIVTLQInsllltwTLWILRQRLSSVNAEVSTLKDTRLLTFKAFAQLF-ILGCSWVLG 817
Cdd:cd15929  155 GCWtRNDNMAYWWIIRLPILlAILINFFI-------FVRILKILVSKLRANQMCKTDYKFRLAKSTLTLIpLLGVHEVVF 227
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 158261825 818 IFQIGPVA-GVMAY--LFT--IINSLQGAFIFLIHCLLNGQVREEYKR 860
Cdd:cd15929  228 AFVTDEQArGTLRFikLFFelFLSSFQGLLVAVLYCFANKEVQSELRK 275
GPS pfam01825
GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for ...
548-590 1.38e-08

GPCR proteolysis site, GPS, motif; The GPS motif is found in GPCRs, and is the site for auto-proteolysis, so is thus named, GPS. The GPS motif is a conserved sequence of ~40 amino acids containing canonical cysteine and tryptophan residues, and is the most highly conserved part of the domain. In most, if not all, cell-adhesion GPCRs these undergo autoproteolysis in the GPS between a conserved aliphatic residue (usually a leucine) and a threonine, serine, or cysteine residue. In higher eukaryotes this motif is found embedded in the C-terminal beta-stranded part of a GAIN domain - GPCR-Autoproteolysis INducing (GAIN). The GAIN-GPS domain adopts a fold in which the GPS motif, at the C-terminus, forms five beta-strands that are tightly integrated into the overall GAIN domain. The GPS motif, evolutionarily conserved from tetrahymena to mammals, is the only extracellular domain shared by all human cell-adhesion GPCRs and PKD proteins, and is the locus of multiple human disease mutations. The GAIN-GPS domain is both necessary and sufficient functionally for autoproteolysis, suggesting an autoproteolytic mechanism whereby the overall GAIN domain fine-tunes the chemical environment in the GPS to catalyze peptide bond hydrolysis. In the cell-adhesion GPCRs and PKD proteins, the GPS motif is always located at the end of their long N-terminal extracellular regions, immediately before the first transmembrane helix of the respective protein.


Pssm-ID: 460350  Cd Length: 44  Bit Score: 51.54  E-value: 1.38e-08
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 158261825  548 PICVSWS-TDVKGGRWTSFGCVILEASETYTICSCNQMANLAVI 590
Cdd:pfam01825   1 PQCVFWDfTNSTTGRWSTEGCTTVSLNDTHTVCSCNHLTSFAVL 44
7tmB1_PDFR cd15261
The pigment dispersing factor receptor, member of the class B seven-transmembrane G ...
608-855 1.39e-08

The pigment dispersing factor receptor, member of the class B seven-transmembrane G protein-coupled receptors; The pigment dispersing factor receptor (PDFR) is a G protein-coupled receptor that binds the circadian clock neuropeptide PDF, a functional ortholog of the mammalian vasoactive intestinal peptide (VIP), on the pacemaker neurons. The PDFR is implicated in regulating flight circuit development and in modulating acute flight In Drosophila melanogaster. The PDFR activation stimulates adenylate cyclase, thereby increasing cAMP levels in many different pacemakers, and the receptor signaling has been shown to regulate behavioral circadian rhythms and geotaxis in Drosophila. The PDFR belongs to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. . These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. They play key roles in hormone homeostasis in mammals and are promising drug targets in various human diseases including diabetes, osteoporosis, obesity, neurodegenerative conditions (Alzheimer###s and Parkinson's), cardiovascular disease, migraine, and psychiatric disorders (anxiety, depression).


Pssm-ID: 320389 [Multi-domain]  Cd Length: 282  Bit Score: 56.99  E-value: 1.39e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 608 VGIIISLVCLVLAIATFLLCRSIRNHNTYLHlhlcvclllaKTLFLA--------------------------------- 654
Cdd:cd15261   10 VGLCLSLVSLIISLFIFSYFRTLRNHRTRIH----------KNLFLAillqviirlvlyidqaitrsrgshtnaattegr 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 655 GIHKTdnKMGCAIIAGFLHYLFLACFFWMLVEAVILflmvRNLKVVNYFSSRnIKMLHICAFGYGLPMLVVVISASVQPQ 734
Cdd:cd15261   80 TINST--PILCEGFYVLLEYAKTVMFMWMFIEGLYL----HNIIVVSVFSGK-PNYLFYYILGWGIPIVHTSAWAIVTLI 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 735 GYGMhNRCWLNTE-TGFIWSFLGPVCTVIVtlqINSL--LLTWTLWILRQRLSSVNAEVSTLKDTRlltfKAFAQLFILG 811
Cdd:cd15261  153 KMKV-NRCWFGYYlTPYYWILEGPRLAVIL---INLFflLNIIRVLVSKLRESHSREIEQVRKAVK----AAIVLLPLLG 224
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 158261825 812 CSWVLGIFQIGPVA-----GVMAYLFTIINSLQGAFIFLIHCLLNGQVR 855
Cdd:cd15261  225 ITNILQMIPPPLTSvivgfAVWSYSTHFLTSFQGFFVALIYCFLNGEVK 273
7tmB1_CRF-R2 cd15446
corticotropin-releasing factor receptor 2, member of the class B family of seven-transmembrane ...
604-861 1.74e-08

corticotropin-releasing factor receptor 2, member of the class B family of seven-transmembrane G protein-coupled receptors; The vertebrate corticotropin-releasing factor (CRF) receptors are predominantly expressed in central nervous system with high levels in cortex tissue, brain stem, and pituitary. They have two isoforms as a result of alternative splicing of the same receptor gene: CRF-R1 and CRF-R2, which differ in tissue distribution and ligand binding affinities. Recently, a third CRF receptor (CRF-R3) has been identified in catfish pituitary. The catfish CRF-R1 is highly homologous to CRF-R3. CRF is a 41-amino acid neuropeptide that plays a central role in coordinating neuroendocrine, behavioral, and autonomic responses to stress by acting as the primary neuroregulator of the hypothalamic-pituitary-adrenal axis, which controls the levels of cortisol and other stress related hormones. In addition, the CRF family of neuropeptides also includes structurally related peptides such as mammalian urocortin, fish urotensin I, and frog sauvagine. The actions of CRF and CRF-related peptides are mediated through specific binding to CRF-R1 and CRF-R2. CRF and urocortin 1 bind and activate mammalian CRF-R1 with similar high affinities. By contrast, urocortin 2 and urocortin 3 do not bind to CRF-R1 or stimulate CRF-R1-mediated cAMP formation. Urocortin 1 also shows high affinity for mammalian CRF-R2, whereas CRF has significantly lower affinity for this receptor. These evidence suggest that urocortin 1 is an endogenous ligand for CRF-R1 and CRF-R2. The CRF receptors are members of the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, and parathyroid hormone (PTH). These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on its cellular location and function, CRF receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320562 [Multi-domain]  Cd Length: 264  Bit Score: 56.51  E-value: 1.74e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 604 IISHVGIIISLVCLVLAIATFLLCRSIR------NHNTYLHLHLCVCLLLAKTLFLAGIHKTdNKMGCAIIAGFLHYLFL 677
Cdd:cd15446    6 IINYLGHCISVGALVVAFLLFLCLRSIRclrniiHWNLITTFILRNVMWFLLQMIDHNIHES-NEVWCRCITTIYNYFVV 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 678 ACFFWMLVEAVILflmvrNLKVVNYFSSRNIKMLHICAFGYGLPMLVVVISASVQPqgYGMHNRCWLNTETGFIWSFL-- 755
Cdd:cd15446   85 TNFFWMFVEGCYL-----HTAIVMTYSTDKLRKWVFLFIGWCIPCPIIVAWAIGKL--YYENEQCWFGKEPGKYIDYIyq 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 756 GPVctvIVTLQINSLLLTWTLwilrqRLSSVNAEVSTLKDT---RLLTFKAFAQLFILGCSWVLgiFQIGPVAG-----V 827
Cdd:cd15446  158 GPV---ILVLLINFVFLFNIV-----RILMTKLRASTTSETiqyRKAVKATLVLLPLLGITYML--FFVNPGEDdisqiV 227
                        250       260       270
                 ....*....|....*....|....*....|....*
gi 158261825 828 MAYLFTIINSLQGAFIFLIHCLLNGQVREEY-KRW 861
Cdd:cd15446  228 FIYFNSFLQSFQGFFVSVFYCFLNGEVRSAArKRW 262
7tmB1_GlucagonR-like_1 cd15985
uncharacterized group of glucagon receptor-like proteins, member of the class B family of ...
601-861 1.78e-08

uncharacterized group of glucagon receptor-like proteins, member of the class B family of seven-transmembrane G protein-coupled receptors; This group consists of uncharacterized proteins with similarity to members of the glucagon receptor family of G protein-coupled receptors, which include glucagon receptor (GCGR), and glucagon-like peptide-1 receptor (GLP1R), and GLP2R. The glucagon receptors are activated by the members of the glucagon (GCG) peptide family including GCG, glucagon-like peptide 1 (GLP1), and GLP2, which are derived from the large proglucagon precursor. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. Receptors in this group belong to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320651 [Multi-domain]  Cd Length: 280  Bit Score: 56.86  E-value: 1.78e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 601 SLYIISHVGIIISLVCLVLAIATFLLCRSI---RNH---NTYLHLHLCVCLLLAKTLFLA---GIHKTDNK--------- 662
Cdd:cd15985    3 SFRMLYTVGYTLSLLTLVSALLILTSIRKLhctRNYihaNLFASFILRAVSVIVKDTLLErrwGREIMRVAdwgellshk 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 663 --MGCAIIAGFLHYLFLACFFWMLVEAVILFlmvrNLKVVNYFSSRNIKMLHICaFGYGLPMLVVVISASVQpqgYGMHN 740
Cdd:cd15985   83 aaIGCRMAQVVMQYCILANHYWFFVEAVYLY----KLLIGAVFSEKNYYLLYLY-LGWGTPVLFVVPWMLAK---YLKEN 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 741 R-CW-LNTETGFIWSFLGPVCTV-IVTLQInsllltwTLWILRQRLSSVNAEVSTLKDTRLLTFKAFAQLF-ILGCSWVL 816
Cdd:cd15985  155 KeCWaLNENMAYWWIIRIPILLAsLINLLI-------FMRILKVILSKLRANQKGYADYKLRLAKATLTLIpLFGIHEVV 227
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 158261825 817 GIFQIGP-VAGVMAYL---FTI-INSLQGAFIFLIHCLLNGQVREE-YKRW 861
Cdd:cd15985  228 FIFATDEqTTGILRYIkvfFTLfLNSFQGFLVAVLYCFANKEVKSElLKKW 278
7tmB1_VIP-R1 cd15269
vasoactive intestinal polypeptide (VIP) receptor 1, member of the class B family of ...
657-860 1.98e-08

vasoactive intestinal polypeptide (VIP) receptor 1, member of the class B family of seven-transmembrane G protein-coupled receptors; Vasoactive intestinal peptide (VIP) receptor 1 is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, growth-hormone-releasing hormone (GHRH), and pituitary adenylate cyclase activating polypeptide (PACAP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. VIP-R1 is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. However, depending on its cellular location, VIP-R1 is also capable of coupling to additional G proteins such as G(q) protein, thus leading to the activation of phospholipase C and intracellular calcium influx.


Pssm-ID: 320397 [Multi-domain]  Cd Length: 268  Bit Score: 56.40  E-value: 1.98e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 657 HKTDNKMGCAIIAGFLHYLFLACFFWMLVEAVILFlmvrNLKVVNYFSSRNIKMLHICaFGYGLPmlVVVISASVQPQGY 736
Cdd:cd15269   69 HCSVASVGCKAAMVFFQYCIMANFFWLLVEGLYLH----TLLAVSFFSERKYFWWYIL-IGWGAP--SVFITAWSVARIY 141
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 737 GMHNRCW-LNTETGFIWSFLGPvctVIVTLQINSLLLTWTLWILRQRLSSV------NAEVSTLKDTRLLTFKAFAQLFI 809
Cdd:cd15269  142 FEDVGCWdTIIESLLWWIIKTP---ILVSILVNFILFICIIRILVQKLHSPdigrneSSQYSRLAKSTLLLIPLFGIHYI 218
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 158261825 810 LgcswvLGIFQIGPVAGVMAYLFTIINSLQGAFIFLIHCLLNGQVREEYKR 860
Cdd:cd15269  219 M-----FAFFPDNFKAEVKLVFELILGSFQGFVVAVLYCFLNGEVQAELKR 264
EGF_CA smart00179
Calcium-binding EGF-like domain;
132-171 2.76e-08

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 50.32  E-value: 2.76e-08
                           10        20        30        40
                   ....*....|....*....|....*....|....*....|
gi 158261825   132 DINECLTSSVCPEHSDCVNSMGSYSCSCQVGFISRNsTCE 171
Cdd:smart00179   1 DIDECASGNPCQNGGTCVNTVGSYRCECPPGYTDGR-NCE 39
7tmB1_PTH-R_related cd15272
invertebrate parathyroid hormone-related receptors, member of the class B family of ...
601-860 3.47e-08

invertebrate parathyroid hormone-related receptors, member of the class B family of seven-transmembrane G protein-coupled receptors; This group includes parathyroid hormone (PTH)-related receptors found in invertebrates such as mollusks and annelid worms. The PTH family receptors are members of the B1 subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. The parathyroid hormone type 1 receptor (PTH1R) is found in all vertebrate species and is activated by two polypeptide ligands: parathyroid hormone (PTH), an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH1R couples predominantly to G(s)- protein that in turn activates adenylyl cyclase thereby producing cAMP, but it can also couple to several G protein subtypes, including G(q/11), G(i/o), and G(12/13), resulting in activation of multiple signaling pathways.


Pssm-ID: 320400 [Multi-domain]  Cd Length: 285  Bit Score: 55.86  E-value: 3.47e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 601 SLYIISHVGIIISLVCLVLAIATFLLCRSI---RN--H-NTYLHLHLCVCLLLAKTLFLAG-------IHKTDNKM---- 663
Cdd:cd15272    3 SIRLMYNIGYGLSLVSLLIAVIIMLYFKKLhcpRNtiHiNLFVSFILRAVLSFIKENLLVQgvgfpgdVYYDSNGViefk 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 664 ------GCAIIAGFLHYLFLACFFWMLVEAvilfLMVRNLKVVNYFSSRNIKMLHIcAFGYGLPMLVVVISASVQpqGYG 737
Cdd:cd15272   83 degshwECKLFFTMFNYILGANYMWIFVEG----LYLHMLIFVAVFSENSRVKWYI-LLGWLSPLLFVLPWVFVR--ATL 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 738 MHNRCW-LNTETGFIWSFLGPVctvIVTLQINSLLLTWTLWILRQRLSSVNAEVSTLKDTRLLTFKAFAQLFILGCSWVL 816
Cdd:cd15272  156 EDTLCWnTNTNKGYFWIIRGPI---VISIAINFLFFINIVRVLFTKLKASNTQESRPFRYRKLAKSTLVLIPLFGVHYMV 232
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 158261825 817 GIFQIGPVAGVMAYLFTI-----INSLQGAFIFLIHCLLNGQVREEYKR 860
Cdd:cd15272  233 FVVLPDSMSSDEAELVWLyfemfFNSFQGFIVALLFCFLNGEVQSEIKK 281
7tmB1_GCGR cd15267
glucagon receptor, member of the class B family of seven-transmembrane G protein-coupled ...
601-861 3.63e-08

glucagon receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Glucagon receptor (GCGR) is a member of the glucagon receptor family of G protein-coupled receptors, which also includes glucagon-like peptide-1 receptor (GLP1R) and GLP2R. GCGR is activated by glucagon, which is derived from the large proglucagon precursor. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. GCGR belongs to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320395 [Multi-domain]  Cd Length: 281  Bit Score: 55.60  E-value: 3.63e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 601 SLYIISHVGIIISLVCLVLAIATFLLCRSI---RNhNTYLHLHLCVCLLLAKTLFLAGIHKTDNK--------------- 662
Cdd:cd15267    5 SFQVMYTVGYSLSLGALLLALAILGGFSKLhcmRN-AIHMNLFASFILKASSVLVIDGLLRTRYSqkieddlsstwlsde 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 663 --MGCAIIAGFLHYLFLACFFWMLVEAVILFlmvrNLKVVNYFSSRNIKMLHICaFGYGLPMLVVVISASVQpqgYGMHN 740
Cdd:cd15267   84 avAGCRVAAVFMQYGIVANYCWLLVEGIYLH----NLLVLAVFPERSYFSLYLC-IGWGAPALFVVPWVVVK---CLYEN 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 741 -RCW-LNTETGFIWSFLGPVCTVIVtlqINsllLTWTLWILRQRLSSVNAEVSTLKDTRLLTFKAFAQLF-ILGCSWVLG 817
Cdd:cd15267  156 vQCWtSNDNMGFWWILRFPVFLAIL---IN---FFIFVRIIQILVSKLRARQMHYTDYKFRLAKSTLTLIpLLGIHEVVF 229
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|
gi 158261825 818 IF-----QIGPVAGVMAYLFTIINSLQGAFIFLIHCLLNGQVREE-YKRW 861
Cdd:cd15267  230 AFvtdehAQGTLRSAKLFFDLFLSSFQGLLVAVLYCFLNKEVQSElRRRW 279
EGF_CA smart00179
Calcium-binding EGF-like domain;
172-205 4.34e-08

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 49.94  E-value: 4.34e-08
                           10        20        30
                   ....*....|....*....|....*....|....
gi 158261825   172 DVDECADPRACPEHATCNNTVGNYSCFCNPGFES 205
Cdd:smart00179   1 DIDECASGNPCQNGGTCVNTVGSYRCECPPGYTD 34
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
132-171 7.12e-08

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 49.17  E-value: 7.12e-08
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 158261825 132 DINECLTSSVCPEHSDCVNSMGSYSCSCQVGFISRNstCE 171
Cdd:cd00054    1 DIDECASGNPCQNGGTCVNTVGSYRCSCPPGYTGRN--CE 38
7tmB1_calcitonin_R cd15274
calcitonin receptor, member of the class B family of seven-transmembrane G protein-coupled ...
661-860 7.48e-08

calcitonin receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; This group includes G protein-coupled receptors for calcitonin (CT) and calcitonin gene-related peptides (CGRPs). Calcitonin, a 32-amino acid peptide hormone, is involved in calcium metabolism in many mammalian species and acts to reduce blood calcium levels and directly inhibits bone resorption by acting on osteoclast. Thus, CT acts as an antagonist to parathyroid hormone and is commonly used in the treatment of bone disorders. The CT receptor is predominantly found in osteoclasts, kidney, and brain, and is primarily coupled to stimulatory G(s) protein, which leads to activation of adenylate cyclase, thereby increasing cAMP production. CGRP, a member of the calcitonin family of peptides, is a potent vasodilator and may contribute to migraine. It is expressed in the peripheral and central nervous system and exists in two forms in humans (alpha-CGRP and beta-CGRP). CGRP meditates its physiological effects through calcitonin receptor-like receptor (CRLR) and receptor activity-modifying protein 1 (RAMP1), a single transmembrane domain protein. Thus, the CRLR/RAMP1 complex serves as a functional CGRP receptor. On the other hand, the CRLR/RAMP2 and CRLR/RAMP3 complexes function as adrenomedullin-specific receptors. The CT and CGRP receptors belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide.


Pssm-ID: 341343 [Multi-domain]  Cd Length: 274  Bit Score: 54.78  E-value: 7.48e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 661 NKMGCAIIAGFLHYLFLACFFWMLVEAVILFLMVrnlkVVNYFSSRNIKMLHIcAFGYGLPMLVVVISASVQPQGYgmHN 740
Cdd:cd15274   71 NPVSCKILHFIHQYMMGCNYFWMLCEGIYLHTLI----VVAVFAEKQRLMWYY-LLGWGFPLIPTTIHAITRAVYY--ND 143
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 741 RCWLNTETGFIWSFLGPVCTVIVtlqINSLLLtwtlwilrqrLSSVNAEVSTLKDTRlltfKAFAQLFI----------- 809
Cdd:cd15274  144 NCWLSSETHLLYIIHGPIMAALV---VNFFFL----------LNIVRVLVTKLRETH----EAESHMYLkavkatlilvp 206
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 158261825 810 -LGCSWVLGIFQI-GPVAG-VMAYLFTIINSLQGAFIFLIHCLLNGQVREEYKR 860
Cdd:cd15274  207 lLGIQFVLFPWRPsGKILGkIYDYVMHSLIHFQGFFVATIFCFCNGEVQATLKR 260
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
172-204 8.57e-08

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 48.79  E-value: 8.57e-08
                         10        20        30
                 ....*....|....*....|....*....|...
gi 158261825 172 DVDECADPRACPEHATCNNTVGNYSCFCNPGFE 204
Cdd:cd00054    1 DIDECASGNPCQNGGTCVNTVGSYRCSCPPGYT 33
7tmB1_GLP2R cd15266
glucagon-like peptide-2 receptor, member of the class B family of seven-transmembrane G ...
602-861 9.39e-08

glucagon-like peptide-2 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Glucagon-like peptide-2 receptor (GLP2R) is a member of the glucagon receptor family of G protein-coupled receptors, which also includes glucagon receptor (GCGR) and GLP1R. GLP2R is activated by glucagon-like peptide 2, which is derived from the large proglucagon precursor. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. GLP2R belongs to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 320394 [Multi-domain]  Cd Length: 280  Bit Score: 54.37  E-value: 9.39e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 602 LYIISHVGIIISLVCLVLAIATFLLCRSI---RNH---NTYLHLHLCVCLLLAKTLFLAGIHKTDNK------------- 662
Cdd:cd15266    4 LQLIYTIGYSLSLISLSLALLILLLLRKLhctRNYihmNLFASFILRALAVLIKDIVLYSTYSKRPDdetgwisylsees 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 663 -MGCAIIAGFLHYLFLACFFWMLVEAVILFlmvrNLKVVNYFSSRNIKMLHIcAFGYGLPMLVVV--ISASVQPQGYGmh 739
Cdd:cd15266   84 sTSCRVAQVFMHYFVGANYFWLLVEGLYLH----TLLVTAVLSERRLLKKYM-LIGWGTPVLFVVpwGVAKILLENTG-- 156
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 740 nrCW-LNTETGFIWSFLGPVC-TVIVTLQInsllltwTLWILRQRLSSVNAEVSTLKDTRLLTFKA-FAQLFILGCSWVL 816
Cdd:cd15266  157 --CWgRNENMGIWWIIRGPILlCITVNFYI-------FLKILKLLLSKLKAQQMRFTDYKYRLARStLVLIPLLGIHEVV 227
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 158261825 817 GIF----QI-GPVAGVMAYLFTIINSLQGAFIFLIHCLLNGQVREE-YKRW 861
Cdd:cd15266  228 FSFitdeQVeGFSRHIRLFIQLTLSSFQGFLVAVLYCFANGEVKAElKKRW 278
7tmB1_GHRHR cd15270
growth-hormone-releasing hormone receptor, member of the class B family of seven-transmembrane ...
604-860 1.28e-07

growth-hormone-releasing hormone receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Growth hormone-releasing hormone receptor (GHRHR) is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, pituitary adenylate cyclase activating polypeptide (PACAP), and vasoactive intestinal peptide. These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. GHRHR is a specific receptor for the growth hormone-releasing hormone (GHRH) that controls the synthesis and release of growth hormone (GH) from the anterior pituitary somatotrophs. Mutations in the gene encoding GHRHR have been connected to isolated growth hormone deficiency (IGHD), a short-stature condition caused by deficient production of GH or lack of GH action. GHRH is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. GHRHR is found in mammals as well as zebrafish and chicken, whereas the GHRHR type 2, an ortholog of the GHRHR, has only been identified in ray-finned fish, chicken and Xenopus. Xenopus laevis GHRHR2 has been shown to interact with both endogenous GHRH and PACAP-related peptide (PRP).


Pssm-ID: 320398 [Multi-domain]  Cd Length: 268  Bit Score: 54.03  E-value: 1.28e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 604 IISHVGIIISLVCLVLAIATFLLCRSIRNHNTYLHLHLCVC-LLLAKTLFLAGI---------HKTDNKMGCAIIAGFLH 673
Cdd:cd15270    6 IIYTVGYSISIVSLCVAVAILVAFRRLHCPRNYIHIQLFFTfILKAIAVFIKDAalfqeddtdHCSMSTVLCKVSVVFCH 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 674 YLFLACFFWMLVEAVILflmvrNLKVVNYFSSRNIKMLHICAFGYGLPmlVVVISASVQPQGYGMHNRCW-LNTETGFIW 752
Cdd:cd15270   86 YCVMTNFFWLLVEAVYL-----NCLLASSFPRGKRYFWWLVLLGWGLP--TLCTGTWILCKLYFEDTECWdINNDSPYWW 158
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 753 SFLGPVCTVIVT---LQINSLLLTWTLWILRQRLSSVNAEVSTLKDTRLLTFKAFAQLFIlgcswvlgIFQIGP---VAG 826
Cdd:cd15270  159 IIKGPIVISVGVnflLFLNIIRILLKKLDPRQINFNNSAQYRRLSKSTLLLIPLFGTHYI--------IFNFLPdyaGLG 230
                        250       260       270
                 ....*....|....*....|....*....|....
gi 158261825 827 VMAYLFTIINSLQGAFIFLIHCLLNGQVREEYKR 860
Cdd:cd15270  231 IRLYLELCLGSFQGFIVAVLYCFLNQEVQTEISR 264
EGF_CA smart00179
Calcium-binding EGF-like domain;
221-250 3.86e-07

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 47.24  E-value: 3.86e-07
                           10        20        30
                   ....*....|....*....|....*....|..
gi 158261825   221 DIDECTEM--CPINSTCTNTPGSYFCTCHPGF 250
Cdd:smart00179   1 DIDECASGnpCQNGGTCVNTVGSYRCECPPGY 32
7tmB1_PTH2R cd15982
parathyroid hormone 2 receptor, member of the class B family of seven-transmembrane G ...
663-860 4.47e-07

parathyroid hormone 2 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone 2 receptor (PTH2R), one of the three subtypes of PTH receptor family, is found in mammals and fish, but not in chicken or frog. PTH2R is potently activated by tuberoinfundibular peptide-39 (TIP-39) but not by PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, strongly activates human PTH2R, but only weakly activates rat and zebrafish PTH2Rs. These results suggest that TIP-39 is a natural ligand for PTH2R. Conversely, PTH1R is activated by PTH and PTHrP, but not by TIP-39. The PTH family receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


Pssm-ID: 320648 [Multi-domain]  Cd Length: 289  Bit Score: 52.63  E-value: 4.47e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 663 MGCAIIAGFLHYLFLACFFWMLVEAvilfLMVRNLKVVNYFSSRNIkMLHICAFGYGLPMLVVVISASVQpqGYGMHNRC 742
Cdd:cd15982   93 VGCKIAVVMFIYFLATNYYWILVEG----LYLHSLIFVAFFSDTKY-LWGFTLIGWGFPAVFVAAWAVVR--ATLADARC 165
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 743 WLNTETGFIWSFLGPVCTVIvtlQINSLLLTWTLWILRQRLSSVNA-EVSTLKDTRLLTFKAFAQLFILGCSWVLGIFQI 821
Cdd:cd15982  166 WELSAGDIKWIYQAPILAAI---GLNFILFLNTVRVLATKIWETNAvGYDTRKQYRKLAKSTLVLVLVFGVHYIVFVCLP 242
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|...
gi 158261825 822 GPVAG----VMAYLFTIINSLQGAFIFLIHCLLNGQVREEYKR 860
Cdd:cd15982  243 HTFTGlgweIRMHCELFFNSFQGFFVSIIYCYCNGEVQTEIKK 285
7tmB1_secretin cd15275
secretin receptor, member of the class B family of seven-transmembrane G protein-coupled ...
600-861 6.14e-07

secretin receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Secretin receptor is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include vasoactive intestinal peptide (VIP), growth-hormone-releasing hormone (GHRH), and pituitary adenylate cyclase activating polypeptide (PACAP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors, and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. Secretin, a polypeptide secreted by entero-endocrine S cells in the small intestine, is involved in maintaining body fluid balance. This polypeptide regulates the secretion of bile and bicarbonate into the duodenum from the pancreatic and biliary ducts, as well as regulates the duodenal pH by the control of gastric acid secretion. Studies with secretin receptor-null mice indicate that secretin plays a role in regulating renal water reabsorption. Secretin mediates its biological actions by elevating intracellular cAMP via G protein-coupled secretin receptor, which is expressed in the brain, pancreas, stomach, kidney, and liver.


Pssm-ID: 320403 [Multi-domain]  Cd Length: 271  Bit Score: 52.05  E-value: 6.14e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 600 FSLYIISHVGIIISLVCLVLAIATFLLCRSIR-NHNTYLHLHLCVCLLLAKTLFL--AGIHKTDN-------KMGCAIIA 669
Cdd:cd15275    2 MYLKTMYTVGYSVSLVSLAIALAILCSFRRLHcTRNYIHMQLFLSFILRAISIFIkdAVLFSSEDdnhcdiyTVGCKVAM 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 670 GFLHYLFLACFFWMLVEAVILFLMVrnlkVVNYFSSRniKMLH-ICAFGYGLPMLVVVISASVQpqgYGMHNR-CWLNTE 747
Cdd:cd15275   82 VFSNYCIMANYSWLLVEGLYLHSLL----SISFFSER--KHLWwYIALGWGSPLIFIISWAIAR---YLHENEgCWDTRR 152
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 748 TGFIWSFL-GPvctVIVTLQINSLLLTWTLWILRQRLSSVNAEVSTLKDTRLLTFKAFAQLFILGCSWVLGIFQIGPVAG 826
Cdd:cd15275  153 NAWIWWIIrGP---VILSIFVNFILFLNILRILMRKLRAPDMRGNEFSQYKRLAKSTLLLIPLFGLHYILFAFFPEDVSS 229
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|
gi 158261825 827 VMAYLFTIIN----SLQGAFIFLIHCLLNGQVREE-YKRW 861
Cdd:cd15275  230 GTMEIWLFFElalgSFQGFVVAVLYCFLNGEVQLEiQRKW 269
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
221-250 8.32e-07

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 46.09  E-value: 8.32e-07
                         10        20        30
                 ....*....|....*....|....*....|..
gi 158261825 221 DIDECTEM--CPINSTCTNTPGSYFCTCHPGF 250
Cdd:cd00054    1 DIDECASGnpCQNGGTCVNTVGSYRCSCPPGY 32
EGF_CA pfam07645
Calcium-binding EGF domain;
172-202 1.58e-06

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 45.31  E-value: 1.58e-06
                          10        20        30
                  ....*....|....*....|....*....|..
gi 158261825  172 DVDECADPRA-CPEHATCNNTVGNYSCFCNPG 202
Cdd:pfam07645   1 DVDECATGTHnCPANTVCVNTIGSFECRCPDG 32
EGF_CA smart00179
Calcium-binding EGF-like domain;
80-114 1.65e-06

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 45.32  E-value: 1.65e-06
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 158261825    80 DIDECSqSPQPCGPNSSCKNLSGRYKCSCLDGFSS 114
Cdd:smart00179   1 DIDECA-SGNPCQNGGTCVNTVGSYRCECPPGYTD 34
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
80-113 3.96e-06

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 44.16  E-value: 3.96e-06
                         10        20        30
                 ....*....|....*....|....*....|....
gi 158261825  80 DIDECSqSPQPCGPNSSCKNLSGRYKCSCLDGFS 113
Cdd:cd00054    1 DIDECA-SGNPCQNGGTCVNTVGSYRCSCPPGYT 33
7tmB1_PACAP-R1 cd15987
pituitary adenylate cyclase-activating polypeptide type 1 receptor, member of the class B ...
665-860 4.22e-06

pituitary adenylate cyclase-activating polypeptide type 1 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Pituitary adenylate cyclase-activating polypeptide type 1 receptor (PACAP-R1) is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, growth-hormone-releasing hormone (GHRH), and vasoactive intestinal peptide (VIP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. PACAP-R1 is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level.


Pssm-ID: 320653 [Multi-domain]  Cd Length: 268  Bit Score: 49.20  E-value: 4.22e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 665 CAIIAGFLHYLFLACFFWMLVEAVILFlmvrNLKVVNYFSSRNIKMLHICaFGYGLPMLVVVISASVQPqgYGMHNRCW- 743
Cdd:cd15987   77 CKAVMVFFHYCVMSNYFWLFIEGLYLF----TLLVETFFPERRYFYWYTI-IGWGTPTICVTVWAVLRL--HFDDTGCWd 149
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 744 LNTETGFIWSFLGPvctVIVTLQINSLLLTWTLWILRQRLSSVNAEVSTLKDTRLLTFKAFAQLFILGCSWVLGIFQIGP 823
Cdd:cd15987  150 MNDNTALWWVIKGP---VVGSIMINFVLFIGIIIILVQKLQSPDIGGNESSIYLRLARSTLLLIPLFGIHYTVFAFSPEN 226
                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 158261825 824 VAGVMAYLFTI-INSLQGAFIFLIHCLLNGQVREEYKR 860
Cdd:cd15987  227 VSKRERLVFELgLGSFQGFVVAVLYCFLNGEVQSEIKR 264
7tmB1_GLP1R cd15268
glucagon-like peptide-1 receptor, member of the class B family of seven-transmembrane G ...
600-860 4.90e-06

glucagon-like peptide-1 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; Glucagon-like peptide-1 receptor (GLP1R) is a member of the glucagon receptor family of G protein-coupled receptors, which also includes glucagon receptor and GLP2R. GLP1R is activated by glucagon-like peptide 1 (GLP1), which is derived from the large proglucagon precursor. Activation of GLP1R stimulates glucose-dependent insulin secretion from pancreatic beta cells, whereas activation of GLP2R stimulates intestinal epithelial proliferation and increases villus height in the small intestine. GCGR regulates blood glucose levels by control of hepatic glycogenolysis and gluconeogenesis and by regulation of insulin secretion from the pancreatic beta-cells. Receptors in this group belong to the B1 (or secretin-like) subfamily of class B GPCRs, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. However, depending on their cellular location, GCGR and GLP receptors can activate multiple G proteins, which can in turn stimulate different second messenger pathways.


Pssm-ID: 341342 [Multi-domain]  Cd Length: 279  Bit Score: 49.18  E-value: 4.90e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 600 FSLYIISHVGIIISLVCLVLAIATFLLCRSI---RNH---NTYLHLHLCVCLLLAKTLFLAGIHKT-------------D 660
Cdd:cd15268    2 LFLYIIYTVGYALSFSALVIASAILLGFRHLhctRNYihlNLFASFILRALSVFIKDAALKWMYSTaaqqhqwdgllsyQ 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 661 NKMGCAIIAGFLHYLFLACFFWMLVEAVILFlmvrNLKVVNYFSSRNIKMLHICaFGYGLPMLVVVISASVQpqgYGMHN 740
Cdd:cd15268   82 DSLSCRLVFLLMQYCVAANYYWLLVEGVYLY----TLLAFSVFSEQRIFRLYLS-IGWGVPLLFVIPWGIVK---YLYED 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 741 R-CWLNTETGFIW----------------SFLGPVCTVIVTLQINsllltwtlwilrqRLSSVNAEVSTLKDTRLLtfka 803
Cdd:cd15268  154 EgCWTRNSNMNYWliirlpilfaigvnflIFIRVICIVVSKLKAN-------------LMCKTDIKCRLAKSTLTL---- 216
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 158261825 804 faqLFILGCSWVLGIFQIGPVA-GVMAY--LFTIIN--SLQGAFIFLIHCLLNGQVREEYKR 860
Cdd:cd15268  217 ---IPLLGTHEVIFAFVMDEHArGTLRFvkLFTELSftSFQGLMVAILYCFVNNEVQMEFRK 275
7tmB1_NPR_B3_insect-like cd15262
insect neuropeptide receptor subgroup B3 and related proteins belong to subfamily B1 of ...
659-860 1.75e-05

insect neuropeptide receptor subgroup B3 and related proteins belong to subfamily B1 of hormone receptors; member of the class B secretin-like seven-transmembrane G protein-coupled receptors; This subgroup includes a neuropeptide receptor found in Bombyx mori (silk worm) and its closely related proteins from arthropods. They belong to the B1 subfamily of class B GPCRs, also referred to as secretin-like receptor family, which includes receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), calcitonin gene-related peptide, parathyroid hormone (PTH), and corticotropin-releasing factor. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways. All members of the B1 subfamily preferentially couple to G proteins of G(s) family, which positively stimulate adenylate cyclase, leading to increased intracellular cAMP formation and calcium influx. The class B GPCRs have been identified in all the vertebrates, from fishes to mammals, as well as invertebrates including Caenorhabditis elegans and Drosophila melanogaster, but are not present in plants, fungi, or prokaryotes.


Pssm-ID: 320390 [Multi-domain]  Cd Length: 270  Bit Score: 47.44  E-value: 1.75e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 659 TDNKMGCAIIAGFLHYLFLACFFWMLVEAVILflmvrNLKVVNYFSSR-NIKMLHicAFGYGLPMLVVVISASVQpqgyG 737
Cdd:cd15262   76 NQNAVVCRLLSIFERAARNAVFACMFVEGFYL-----HRLIVAVFAEKsSIRFLY--VIGAVLPLFPVIIWAIIR----A 144
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 738 MHN--RCWLNTETGFIWSFLGPVCTVIVtlqINSLLLTWTLWILRQRLSSVNAEVSTLKDTRlltfkafAQLF---ILGC 812
Cdd:cd15262  145 LHNdhSCWVVDIEGVQWVLDTPRLFILL---VNTVLLVDIIRVLVTKLRNTEENSQTKSTTR-------ATLFlvpLFGL 214
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 158261825 813 SWVLGIFQI---GPVAGVMAYLFT-IINSLQGAFIFLIHCLLNGQVREEYKR 860
Cdd:cd15262  215 HFVITAYRPstdDCDWEDIYYYANyLIEGLQGFLVAILFCYINKEVHYLIKN 266
EGF_CA pfam07645
Calcium-binding EGF domain;
221-249 2.34e-05

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 41.84  E-value: 2.34e-05
                          10        20        30
                  ....*....|....*....|....*....|..
gi 158261825  221 DIDEC---TEMCPINSTCTNTPGSYFCTCHPG 249
Cdd:pfam07645   1 DVDECatgTHNCPANTVCVNTIGSFECRCPDG 32
EGF_CA smart00179
Calcium-binding EGF-like domain;
268-301 2.95e-05

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 41.85  E-value: 2.95e-05
                           10        20        30
                   ....*....|....*....|....*....|....
gi 158261825   268 DIDECrQDPSTCGPNSICTNALGSYSCGCIAGFH 301
Cdd:smart00179   1 DIDEC-ASGNPCQNGGTCVNTVGSYRCECPPGYT 33
7tmB1_PTH3R cd15983
parathyroid hormone 3 receptor, member of the class B family of seven-transmembrane G ...
602-860 6.75e-05

parathyroid hormone 3 receptor, member of the class B family of seven-transmembrane G protein-coupled receptors; The parathyroid hormone 3 receptor (PTH3R), one of the three subtypes of PTH receptor family, is found in chicken and fish, but it is absent in mammals. On the other hand, the PTH1R is found in all vertebrate species, whereas PTH2R is found in mammals and fish, but not in chicken or frog. PTH1R is activated by two polypeptide ligands: PTH, an endocrine hormone that regulates calcium homoeostasis and bone maintenance, and PTH-related peptide (PTHrP), a paracrine factor that regulates endochondral bone development. PTH2R is potently activated by tuberoinfundibular peptide-39 (TIP-39), but not by PTHrP. PTH also strongly activates human PTH2R, but only weakly activates rat and zebrafish PTH2Rs, suggesting that TIP-39 is a natural ligand for PTH2R. Conversely, PTH3R binds and responds to both PTH and PTHrP, but not the TIP-39. The PTH family receptors are members of the B1 (or secretin-like) subfamily of class B GPCRs, which include receptors for polypeptide hormones of 27-141 amino-acid residues such as secretin, glucagon, glucagon-like peptide (GLP), and calcitonin gene-related peptide. These receptors contain the large N-terminal extracellular domain (ECD), which plays a critical role in hormone recognition by binding to the C-terminal portion of the peptide. On the other hand, the N-terminal segment of the hormone induces receptor activation by interacting with the receptor transmembrane domains and connecting extracellular loops, triggering intracellular signaling pathways.


Pssm-ID: 320649 [Multi-domain]  Cd Length: 285  Bit Score: 45.68  E-value: 6.75e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 602 LYIISHVGIIISLVCLVLAIatFLLCRSIRNH---NTYLHLHLCVCLLLAKTLFL--AGIHKTDNK-------------- 662
Cdd:cd15983    4 LHLMYTIGYSISLAALLVAV--CILCYFKRLHctrNYIHIHLFASFICRAGSIFVkdAVLYSGTNEgealdekiefglsp 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 663 ------MGCAIIAGFLHYLFLACFFWMLVEAvilfLMVRNLKVVNYFSSRNIkMLHICAFGYGLPMLVVVISASVQPQGy 736
Cdd:cd15983   82 gtrlqwVGCKVTVTLFLYFLATNHYWILVEG----LYLHSLIFMAFLSDKNY-LWALTIIGWGLPAVFVSVWASVRVSL- 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 737 gMHNRCWLNTETGFIWSFLGPVCTVIVtlqINSLLLTWTLWILRQRLSSVNA-EVSTLKDTRLLTFKAFAQLFILGCSWV 815
Cdd:cd15983  156 -ADTQCWDLSAGNLKWIYQVPILAAIL---VNFFLFLNIVRVLASKLWETNTgKLDPRQQYRKLLKSTLVLMPLFGVHYV 231
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 158261825 816 LgiFQIGPVAGVMAYLFTI-------INSLQGAFIFLIHCLLNGQVREEYKR 860
Cdd:cd15983  232 L--FMAMPYTDVTGLLWQIqmhyemlFNSSQGFFVAFIYCFCNGEVQAEIKK 281
EGF_CA pfam07645
Calcium-binding EGF domain;
132-162 6.88e-05

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 40.68  E-value: 6.88e-05
                          10        20        30
                  ....*....|....*....|....*....|..
gi 158261825  132 DINECLT-SSVCPEHSDCVNSMGSYSCSCQVG 162
Cdd:pfam07645   1 DVDECATgTHNCPANTVCVNTIGSFECRCPDG 32
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
268-301 8.07e-05

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 40.70  E-value: 8.07e-05
                         10        20        30
                 ....*....|....*....|....*....|....
gi 158261825 268 DIDECrQDPSTCGPNSICTNALGSYSCGCIAGFH 301
Cdd:cd00054    1 DIDEC-ASGNPCQNGGTCVNTVGSYRCSCPPGYT 33
7tm_GPCRs cd14964
seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary ...
661-851 1.73e-04

seven-transmembrane G protein-coupled receptor superfamily; This hierarchical evolutionary model represents the seven-transmembrane (7TM) receptors, often referred to as G protein-coupled receptors (GPCRs), which transmit physiological signals from the outside of the cell to the inside via G proteins. GPCRs constitute the largest known superfamily of transmembrane receptors across the three kingdoms of life that respond to a wide variety of extracellular stimuli including peptides, lipids, neurotransmitters, amino acids, hormones, and sensory stimuli such as light, smell and taste. All GPCRs share a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes. However, some 7TM receptors, such as the type 1 microbial rhodopsins, do not activate G proteins. Based on sequence similarity, GPCRs can be divided into six major classes: class A (the rhodopsin-like family), class B (the Methuselah-like, adhesion and secretin-like receptor family), class C (the metabotropic glutamate receptor family), class D (the fungal mating pheromone receptors), class E (the cAMP receptor family), and class F (the frizzled/smoothened receptor family). Nearly 800 human GPCR genes have been identified and are involved essentially in all major physiological processes. Approximately 40% of clinically marketed drugs mediate their effects through modulation of GPCR function for the treatment of a variety of human diseases including bacterial infections.


Pssm-ID: 410628 [Multi-domain]  Cd Length: 267  Bit Score: 44.34  E-value: 1.73e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 661 NKMGCAIIAGFLHYLFLACFFWMLVEAVILFLMVRNLKVVNYFSSRNiKMLHICAFGYGLPMLVVVISASVQpqgYGMHN 740
Cdd:cd14964   67 PQALCYLIYLLWYGANLASIWTTLVLTYHRYFALCGPLKYTRLSSPG-KTRVIILGCWGVSLLLSIPPLVGK---GAIPR 142
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 741 RCWLNTETGFI------------WSFLGPV--CTVIVTLQINSLLLTWTLWILRQRLssvnaevSTLKDTRLLTFKAFAQ 806
Cdd:cd14964  143 YNTLTGSCYLIcttiyltwgfllVSFLLPLvaFLVIFSRIVLRLRRRVRAIRSAASL-------NTDKNLKATKSLLILV 215
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 158261825 807 LFILGCSWVLGIFQI-------GPVAGVMAYLFTIINSLQGAFIFLIHCLLN 851
Cdd:cd14964  216 ITFLLCWLPFSIVFIlhalvaaGQGLNLLSILANLLAVLASTLNPFIYCLGN 267
EGF_CA pfam07645
Calcium-binding EGF domain;
268-299 1.87e-04

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 39.53  E-value: 1.87e-04
                          10        20        30
                  ....*....|....*....|....*....|..
gi 158261825  268 DIDECRQDPSTCGPNSICTNALGSYSCGCIAG 299
Cdd:pfam07645   1 DVDECATGTHNCPANTVCVNTIGSFECRCPDG 32
EGF cd00053
Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large ...
135-171 2.57e-04

Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium.


Pssm-ID: 238010  Cd Length: 36  Bit Score: 39.00  E-value: 2.57e-04
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 158261825 135 ECLTSSVCPEHSDCVNSMGSYSCSCQVGFiSRNSTCE 171
Cdd:cd00053    1 ECAASNPCSNGGTCVNTPGSYRCVCPPGY-TGDRSCE 36
EGF cd00053
Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large ...
175-204 2.67e-04

Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium.


Pssm-ID: 238010  Cd Length: 36  Bit Score: 39.00  E-value: 2.67e-04
                         10        20        30
                 ....*....|....*....|....*....|
gi 158261825 175 ECADPRACPEHATCNNTVGNYSCFCNPGFE 204
Cdd:cd00053    1 ECAASNPCSNGGTCVNTPGSYRCVCPPGYT 30
7tmB1_VIP-R2 cd15986
vasoactive intestinal polypeptide (VIP) receptor 2, member of the class B family of ...
663-860 8.13e-04

vasoactive intestinal polypeptide (VIP) receptor 2, member of the class B family of seven-transmembrane G protein-coupled receptors; Vasoactive intestinal peptide (VIP) receptor 2 is a member of the group of G protein-coupled receptors for structurally similar peptide hormones that also include secretin, growth-hormone-releasing hormone (GHRH), and pituitary adenylate cyclase activating polypeptide (PACAP). These receptors are classified into the subfamily B1 of class B GRCRs that consists of the classical hormone receptors and have been identified in all the vertebrates, from fishes to mammals, but are not present in plants, fungi, or prokaryotes. For all class B receptors, the large N-terminal extracellular domain plays a critical role in peptide hormone recognition. VIP and PACAP exert their effects through three G protein-coupled receptors, PACAP-R1, VIP-R1 (vasoactive intestinal receptor type 1, also known as VPAC1) and VIP-R2 (or VPAC2). PACAP-R1 binds only PACAP with high affinity, whereas VIP-R1 and -R2 specifically bind and respond to both VIP and PACAP. VIP and PACAP and their receptors are widely expressed in the brain and periphery. They are upregulated in neurons and immune cells in responses to CNS injury and/or inflammation and exert potent anti-inflammatory effects, as well as play important roles in the control of circadian rhythms and stress responses, among many others. VIP-R1 is preferentially coupled to a stimulatory G(s) protein, which leads to the activation of adenylate cyclase and thereby increases in intracellular cAMP level. However, depending on its cellular location, VIP-R1 is also capable of coupling to additional G proteins such as G(q) protein, thus leading to the activation of phospholipase C and intracellular calcium influx.


Pssm-ID: 320652 [Multi-domain]  Cd Length: 269  Bit Score: 42.10  E-value: 8.13e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 663 MGCAIIAGFLHYLFLACFFWMLVEAVILFLMvrnlkVVNYFSSRNIKMLHICaFGYGLPmlVVVISASVQPQGYGMHNRC 742
Cdd:cd15986   77 IGCKVSLVILQYCIMANFYWLLVEGLYLHTL-----LVVIFSENRHFIVYLL-IGWGIP--TVFIIAWIVARIYLEDTGC 148
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 158261825 743 WLNTETGFIWSFLGpvCTVIVTLQINSLLLTWTLWILRQRLSSVNAEVSTLKDTRLLTFKAFAQLFILGCSWVLGIFQIG 822
Cdd:cd15986  149 WDTNDHSVPWWVIR--IPIIISIILNFILFISIIRILLQKLRSPDVGGNDQSQYKRLAKSTLLLIPLFGVHYIVFVYFPD 226
                        170       180       190
                 ....*....|....*....|....*....|....*....
gi 158261825 823 PVAGVMAYLFTI-INSLQGAFIFLIHCLLNGQVREEYKR 860
Cdd:cd15986  227 SSSSNYQIFFELcLGSFQGLVVAILYCFLNSEVQGELKR 265
EGF_CA cd00054
Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular ...
33-62 8.97e-04

Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.


Pssm-ID: 238011  Cd Length: 38  Bit Score: 37.62  E-value: 8.97e-04
                         10        20        30
                 ....*....|....*....|....*....|
gi 158261825  33 NNCRDSTLCPAYATCTNTVDSYYCACKQGF 62
Cdd:cd00054    3 DECASGNPCQNGGTCVNTVGSYRCSCPPGY 32
EGF_CA pfam07645
Calcium-binding EGF domain;
80-111 9.39e-04

Calcium-binding EGF domain;


Pssm-ID: 429571  Cd Length: 32  Bit Score: 37.22  E-value: 9.39e-04
                          10        20        30
                  ....*....|....*....|....*....|..
gi 158261825   80 DIDECSQSPQPCGPNSSCKNLSGRYKCSCLDG 111
Cdd:pfam07645   1 DVDECATGTHNCPANTVCVNTIGSFECRCPDG 32
EGF_3 pfam12947
EGF domain; This family includes a variety of EGF-like domain homologs. This family includes ...
182-204 1.76e-03

EGF domain; This family includes a variety of EGF-like domain homologs. This family includes the C-terminal domain of the malaria parasite MSP1 protein.


Pssm-ID: 463759 [Multi-domain]  Cd Length: 36  Bit Score: 36.81  E-value: 1.76e-03
                          10        20
                  ....*....|....*....|...
gi 158261825  182 CPEHATCNNTVGNYSCFCNPGFE 204
Cdd:pfam12947   8 CHPNATCTNTGGSFTCTCNDGYT 30
EGF_CA smart00179
Calcium-binding EGF-like domain;
33-62 2.86e-03

Calcium-binding EGF-like domain;


Pssm-ID: 214542 [Multi-domain]  Cd Length: 39  Bit Score: 36.07  E-value: 2.86e-03
                           10        20        30
                   ....*....|....*....|....*....|
gi 158261825    33 NNCRDSTLCPAYATCTNTVDSYYCACKQGF 62
Cdd:smart00179   3 DECASGNPCQNGGTCVNTVGSYRCECPPGY 32
EGF_3 pfam12947
EGF domain; This family includes a variety of EGF-like domain homologs. This family includes ...
229-250 3.37e-03

EGF domain; This family includes a variety of EGF-like domain homologs. This family includes the C-terminal domain of the malaria parasite MSP1 protein.


Pssm-ID: 463759 [Multi-domain]  Cd Length: 36  Bit Score: 36.04  E-value: 3.37e-03
                          10        20
                  ....*....|....*....|..
gi 158261825  229 CPINSTCTNTPGSYFCTCHPGF 250
Cdd:pfam12947   8 CHPNATCTNTGGSFTCTCNDGY 29
EGF cd00053
Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large ...
229-250 3.48e-03

Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium.


Pssm-ID: 238010  Cd Length: 36  Bit Score: 35.92  E-value: 3.48e-03
                         10        20
                 ....*....|....*....|..
gi 158261825 229 CPINSTCTNTPGSYFCTCHPGF 250
Cdd:cd00053    8 CSNGGTCVNTPGSYRCVCPPGY 29
EGF_3 pfam12947
EGF domain; This family includes a variety of EGF-like domain homologs. This family includes ...
41-62 4.18e-03

EGF domain; This family includes a variety of EGF-like domain homologs. This family includes the C-terminal domain of the malaria parasite MSP1 protein.


Pssm-ID: 463759 [Multi-domain]  Cd Length: 36  Bit Score: 35.65  E-value: 4.18e-03
                          10        20
                  ....*....|....*....|..
gi 158261825   41 CPAYATCTNTVDSYYCACKQGF 62
Cdd:pfam12947   8 CHPNATCTNTGGSFTCTCNDGY 29
EGF cd00053
Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large ...
35-62 4.87e-03

Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium.


Pssm-ID: 238010  Cd Length: 36  Bit Score: 35.53  E-value: 4.87e-03
                         10        20
                 ....*....|....*....|....*...
gi 158261825  35 CRDSTLCPAYATCTNTVDSYYCACKQGF 62
Cdd:cd00053    2 CAASNPCSNGGTCVNTPGSYRCVCPPGY 29
EGF_3 pfam12947
EGF domain; This family includes a variety of EGF-like domain homologs. This family includes ...
84-113 7.05e-03

EGF domain; This family includes a variety of EGF-like domain homologs. This family includes the C-terminal domain of the malaria parasite MSP1 protein.


Pssm-ID: 463759 [Multi-domain]  Cd Length: 36  Bit Score: 34.88  E-value: 7.05e-03
                          10        20        30
                  ....*....|....*....|....*....|
gi 158261825   84 CSQSPQPCGPNSSCKNLSGRYKCSCLDGFS 113
Cdd:pfam12947   1 CSDNNGGCHPNATCTNTGGSFTCTCNDGYT 30
EGF_3 pfam12947
EGF domain; This family includes a variety of EGF-like domain homologs. This family includes ...
272-301 9.19e-03

EGF domain; This family includes a variety of EGF-like domain homologs. This family includes the C-terminal domain of the malaria parasite MSP1 protein.


Pssm-ID: 463759 [Multi-domain]  Cd Length: 36  Bit Score: 34.50  E-value: 9.19e-03
                          10        20        30
                  ....*....|....*....|....*....|
gi 158261825  272 CRQDPSTCGPNSICTNALGSYSCGCIAGFH 301
Cdd:pfam12947   1 CSDNNGGCHPNATCTNTGGSFTCTCNDGYT 30
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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