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Conserved domains on  [gi|379999274|gb|AFD24464|]
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Bile acid-CoA:amino acid N-acyltransferase [Deinococcus gobiensis I-0]

Protein Classification

acyl-CoA thioesterase/bile acid-CoA:amino acid N-acyltransferase family protein( domain architecture ID 10521454)

acyl-CoA thioesterase/bile acid-CoA:amino acid N-acyltransferase (BAAT) family protein may catalyze the hydrolysis of acyl-CoA or catalyze the amidation of bile acids with the amino acids taurine and glycine

CATH:  3.40.50.1820
EC:  3.-.-.-
Gene Ontology:  GO:0016787
PubMed:  19508187|12369917
SCOP:  3000102

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
Bile_Hydr_Trans pfam04775
Acyl-CoA thioester hydrolase/BAAT N-terminal region; This family consists of the amino termini ...
21-138 4.81e-29

Acyl-CoA thioester hydrolase/BAAT N-terminal region; This family consists of the amino termini of acyl-CoA thioester hydrolase and bile acid-CoA:amino acid N-acetyltransferase (BAAT). This region is not thought to contain the active site of either enzyme. Thioesterase isoforms have been identified in peroxisomes, cytoplasm and mitochondria, where they are thought to have distinct functions in lipid metabolism. For example, in peroxisomes, the hydrolase acts on bile-CoA esters.


:

Pssm-ID: 461422  Cd Length: 127  Bit Score: 110.02  E-value: 4.81e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379999274   21 FFLRAWALPPKTEVTVGTAAPDRHGACWQAEATYRTTAAGALDLSAQPALTGRFRGVDPAGPIWSLRPRPDHTPAFFEAP 100
Cdd:pfam04775   4 VHIRVSGLPPGQPVTLRALLTDEKGGLFESYAVYRADENGEVDLSRDAPLGGSYTGVDPMGLFWSMKPEPGFRPRLYKRD 83
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 379999274  101 EAGVTLTVRLSA------GERVLEETTVRRLTHSPDLHETPVRE 138
Cdd:pfam04775  84 VLPTPFVVTLSVydgseeSGKPLASVTVERWYMAPGVRRIEVRE 127
Abhydrolase super family cl21494
alpha/beta hydrolases; A functionally diverse superfamily containing proteases, lipases, ...
203-412 9.56e-24

alpha/beta hydrolases; A functionally diverse superfamily containing proteases, lipases, peroxidases, esterases, epoxide hydrolases and dehalogenases. The catalytic apparatus typically involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine, and often the mechanism involves a nucleophilic attack on a carbonyl carbon atom.


The actual alignment was detected with superfamily member pfam08840:

Pssm-ID: 473884 [Multi-domain]  Cd Length: 211  Bit Score: 98.12  E-value: 9.56e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379999274  203 LPLEYFGQAAAWLRARPEVAGRRVGVTGASKGAEAALLVGATFPQdIGAVAAFAPSGLVFEGIDRA--GTFPP-GPPMSS 279
Cdd:pfam08840   1 VDLEYFEEAINYLLRHPKVKGPGIGLLGISKGGELALSMATFLKQ-ITATVSINGSAVVSGDPLVYkdNPLPPlGEGMRR 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379999274  280 WSFrgqpwpYLPYHTDWAAFFA-----AGPQPMTPVhhraarqasaaqiaaatipaERVAGPVLLVSGGEDQVWHAAELA 354
Cdd:pfam08840  80 IKV------NKDGLLDIRDMFNdplskPDPKSLIPV--------------------ERAKGPFLFVVGQDDHNWPSVFYA 133
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 379999274  355 EVAQRRREAAGR--PSRHLTHPHAGHHLSLPGLPT-------YIHGLWTPGGEEQANAHLQFQAWEA 412
Cdd:pfam08840 134 KKACERLQKHGKevEVQLVCYPGAGHLIEPPYFPHcgasfhaLVGMPVLWGGEPKAHAKAQEDAWKK 200
 
Name Accession Description Interval E-value
Bile_Hydr_Trans pfam04775
Acyl-CoA thioester hydrolase/BAAT N-terminal region; This family consists of the amino termini ...
21-138 4.81e-29

Acyl-CoA thioester hydrolase/BAAT N-terminal region; This family consists of the amino termini of acyl-CoA thioester hydrolase and bile acid-CoA:amino acid N-acetyltransferase (BAAT). This region is not thought to contain the active site of either enzyme. Thioesterase isoforms have been identified in peroxisomes, cytoplasm and mitochondria, where they are thought to have distinct functions in lipid metabolism. For example, in peroxisomes, the hydrolase acts on bile-CoA esters.


Pssm-ID: 461422  Cd Length: 127  Bit Score: 110.02  E-value: 4.81e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379999274   21 FFLRAWALPPKTEVTVGTAAPDRHGACWQAEATYRTTAAGALDLSAQPALTGRFRGVDPAGPIWSLRPRPDHTPAFFEAP 100
Cdd:pfam04775   4 VHIRVSGLPPGQPVTLRALLTDEKGGLFESYAVYRADENGEVDLSRDAPLGGSYTGVDPMGLFWSMKPEPGFRPRLYKRD 83
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 379999274  101 EAGVTLTVRLSA------GERVLEETTVRRLTHSPDLHETPVRE 138
Cdd:pfam04775  84 VLPTPFVVTLSVydgseeSGKPLASVTVERWYMAPGVRRIEVRE 127
BAAT_C pfam08840
BAAT / Acyl-CoA thioester hydrolase C terminal; This catalytic domain is found at the C ...
203-412 9.56e-24

BAAT / Acyl-CoA thioester hydrolase C terminal; This catalytic domain is found at the C terminal of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases (BAAT).


Pssm-ID: 430252 [Multi-domain]  Cd Length: 211  Bit Score: 98.12  E-value: 9.56e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379999274  203 LPLEYFGQAAAWLRARPEVAGRRVGVTGASKGAEAALLVGATFPQdIGAVAAFAPSGLVFEGIDRA--GTFPP-GPPMSS 279
Cdd:pfam08840   1 VDLEYFEEAINYLLRHPKVKGPGIGLLGISKGGELALSMATFLKQ-ITATVSINGSAVVSGDPLVYkdNPLPPlGEGMRR 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379999274  280 WSFrgqpwpYLPYHTDWAAFFA-----AGPQPMTPVhhraarqasaaqiaaatipaERVAGPVLLVSGGEDQVWHAAELA 354
Cdd:pfam08840  80 IKV------NKDGLLDIRDMFNdplskPDPKSLIPV--------------------ERAKGPFLFVVGQDDHNWPSVFYA 133
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 379999274  355 EVAQRRREAAGR--PSRHLTHPHAGHHLSLPGLPT-------YIHGLWTPGGEEQANAHLQFQAWEA 412
Cdd:pfam08840 134 KKACERLQKHGKevEVQLVCYPGAGHLIEPPYFPHcgasfhaLVGMPVLWGGEPKAHAKAQEDAWKK 200
DAP2 COG1506
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
138-389 3.38e-17

Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];


Pssm-ID: 441115 [Multi-domain]  Cd Length: 234  Bit Score: 80.45  E-value: 3.38e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379999274 138 EDG--LYGSLFSPAPGTDLRGACLCLGG--SEGGLYSPVAALLASEGFLVLNLAYFGVPDSGlpENLINLPLEYFGQAAA 213
Cdd:COG1506    5 ADGttLPGWLYLPADGKKYPVVVYVHGGpgSRDDSFLPLAQALASRGYAVLAPDYRGYGESA--GDWGGDEVDDVLAAID 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379999274 214 WLRARPEVAGRRVGVTGASKGAEAALLVGATFPQDIGAVAAFApsglvfegidragtfppgpPMSSW-SFRGQPWPYLPY 292
Cdd:COG1506   83 YLAARPYVDPDRIGIYGHSYGGYMALLAAARHPDRFKAAVALA-------------------GVSDLrSYYGTTREYTER 143
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379999274 293 HTDWAAFFAAGPQPMTPVHHraarqasaaqiaaatipAERVAGPVLLVSGGEDQVWHAAELAEVAQRRREaAGRPSRHLT 372
Cdd:COG1506  144 LMGGPWEDPEAYAARSPLAY-----------------ADKLKTPLLLIHGEADDRVPPEQAERLYEALKK-AGKPVELLV 205
                        250
                 ....*....|....*..
gi 379999274 373 HPHAGHHLSLPGLPTYI 389
Cdd:COG1506  206 YPGEGHGFSGAGAPDYL 222
PRK10566 PRK10566
esterase; Provisional
205-385 4.52e-03

esterase; Provisional


Pssm-ID: 182555 [Multi-domain]  Cd Length: 249  Bit Score: 38.43  E-value: 4.52e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379999274 205 LEYFGQAAAWLRARPEVAGRRVGVTGASKGAEAALLVGATFPQdIGAVAAFAPSGLvFEGIDRAgTFPPGPPMSswsfrg 284
Cdd:PRK10566  88 MQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPW-VKCVASLMGSGY-FTSLART-LFPPLIPET------ 158
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379999274 285 qpwpylPYHTDWAAFFAAGPQPMTPVHHraarqasaaqiaaatipAERVAG-PVLLVSGGEDQVWHAAELAEVAQRRREA 363
Cdd:PRK10566 159 ------AAQQAEFNNIVAPLAEWEVTHQ-----------------LEQLADrPLLLWHGLADDVVPAAESLRLQQALRER 215
                        170       180
                 ....*....|....*....|....*
gi 379999274 364 AGrpSRHLT---HPHAGHHLSLPGL 385
Cdd:PRK10566 216 GL--DKNLTclwEPGVRHRITPEAL 238
 
Name Accession Description Interval E-value
Bile_Hydr_Trans pfam04775
Acyl-CoA thioester hydrolase/BAAT N-terminal region; This family consists of the amino termini ...
21-138 4.81e-29

Acyl-CoA thioester hydrolase/BAAT N-terminal region; This family consists of the amino termini of acyl-CoA thioester hydrolase and bile acid-CoA:amino acid N-acetyltransferase (BAAT). This region is not thought to contain the active site of either enzyme. Thioesterase isoforms have been identified in peroxisomes, cytoplasm and mitochondria, where they are thought to have distinct functions in lipid metabolism. For example, in peroxisomes, the hydrolase acts on bile-CoA esters.


Pssm-ID: 461422  Cd Length: 127  Bit Score: 110.02  E-value: 4.81e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379999274   21 FFLRAWALPPKTEVTVGTAAPDRHGACWQAEATYRTTAAGALDLSAQPALTGRFRGVDPAGPIWSLRPRPDHTPAFFEAP 100
Cdd:pfam04775   4 VHIRVSGLPPGQPVTLRALLTDEKGGLFESYAVYRADENGEVDLSRDAPLGGSYTGVDPMGLFWSMKPEPGFRPRLYKRD 83
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 379999274  101 EAGVTLTVRLSA------GERVLEETTVRRLTHSPDLHETPVRE 138
Cdd:pfam04775  84 VLPTPFVVTLSVydgseeSGKPLASVTVERWYMAPGVRRIEVRE 127
BAAT_C pfam08840
BAAT / Acyl-CoA thioester hydrolase C terminal; This catalytic domain is found at the C ...
203-412 9.56e-24

BAAT / Acyl-CoA thioester hydrolase C terminal; This catalytic domain is found at the C terminal of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases (BAAT).


Pssm-ID: 430252 [Multi-domain]  Cd Length: 211  Bit Score: 98.12  E-value: 9.56e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379999274  203 LPLEYFGQAAAWLRARPEVAGRRVGVTGASKGAEAALLVGATFPQdIGAVAAFAPSGLVFEGIDRA--GTFPP-GPPMSS 279
Cdd:pfam08840   1 VDLEYFEEAINYLLRHPKVKGPGIGLLGISKGGELALSMATFLKQ-ITATVSINGSAVVSGDPLVYkdNPLPPlGEGMRR 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379999274  280 WSFrgqpwpYLPYHTDWAAFFA-----AGPQPMTPVhhraarqasaaqiaaatipaERVAGPVLLVSGGEDQVWHAAELA 354
Cdd:pfam08840  80 IKV------NKDGLLDIRDMFNdplskPDPKSLIPV--------------------ERAKGPFLFVVGQDDHNWPSVFYA 133
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 379999274  355 EVAQRRREAAGR--PSRHLTHPHAGHHLSLPGLPT-------YIHGLWTPGGEEQANAHLQFQAWEA 412
Cdd:pfam08840 134 KKACERLQKHGKevEVQLVCYPGAGHLIEPPYFPHcgasfhaLVGMPVLWGGEPKAHAKAQEDAWKK 200
DAP2 COG1506
Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];
138-389 3.38e-17

Dipeptidyl aminopeptidase/acylaminoacyl peptidase [Amino acid transport and metabolism];


Pssm-ID: 441115 [Multi-domain]  Cd Length: 234  Bit Score: 80.45  E-value: 3.38e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379999274 138 EDG--LYGSLFSPAPGTDLRGACLCLGG--SEGGLYSPVAALLASEGFLVLNLAYFGVPDSGlpENLINLPLEYFGQAAA 213
Cdd:COG1506    5 ADGttLPGWLYLPADGKKYPVVVYVHGGpgSRDDSFLPLAQALASRGYAVLAPDYRGYGESA--GDWGGDEVDDVLAAID 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379999274 214 WLRARPEVAGRRVGVTGASKGAEAALLVGATFPQDIGAVAAFApsglvfegidragtfppgpPMSSW-SFRGQPWPYLPY 292
Cdd:COG1506   83 YLAARPYVDPDRIGIYGHSYGGYMALLAAARHPDRFKAAVALA-------------------GVSDLrSYYGTTREYTER 143
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379999274 293 HTDWAAFFAAGPQPMTPVHHraarqasaaqiaaatipAERVAGPVLLVSGGEDQVWHAAELAEVAQRRREaAGRPSRHLT 372
Cdd:COG1506  144 LMGGPWEDPEAYAARSPLAY-----------------ADKLKTPLLLIHGEADDRVPPEQAERLYEALKK-AGKPVELLV 205
                        250
                 ....*....|....*..
gi 379999274 373 HPHAGHHLSLPGLPTYI 389
Cdd:COG1506  206 YPGEGHGFSGAGAPDYL 222
DLH COG0412
Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism];
172-388 1.94e-09

Dienelactone hydrolase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 440181 [Multi-domain]  Cd Length: 226  Bit Score: 57.67  E-value: 1.94e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379999274 172 VAALLASEGFLVLNLAYFGVPDSGLPENLIN---------LPLEYFGQAAAWLRARPEVAGRRVGVTGASKGAEAALLVG 242
Cdd:COG0412   48 VARRLAAAGYVVLAPDLYGRGGPGDDPDEARalmgaldpeLLAADLRAALDWLKAQPEVDAGRVGVVGFCFGGGLALLAA 127
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379999274 243 ATFPqDIGAVAAFAPSGLVFEGIDRAGtfppgppmsswsfrgqpwpylpyhtdwaaffaagpqpmtpvhhraarqasaaq 322
Cdd:COG0412  128 ARGP-DLAAAVSFYGGLPADDLLDLAA----------------------------------------------------- 153
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 379999274 323 iaaatipaeRVAGPVLLVSGGEDQVWHAAELAEVAQRRReAAGRPSRHLTHPHAGHHLSLPGLPTY 388
Cdd:COG0412  154 ---------RIKAPVLLLYGEKDPLVPPEQVAALEAALA-AAGVDVELHVYPGAGHGFTNPGRPRY 209
FrsA COG1073
Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms]; ...
138-378 2.99e-09

Fermentation-respiration switch esterase FrsA, DUF1100 family [Signal transduction mechanisms];


Pssm-ID: 440691 [Multi-domain]  Cd Length: 253  Bit Score: 57.23  E-value: 2.99e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379999274 138 EDG--LYGSLFSPAPGTDLRGACLCLGGSEGGL--YSPVAALLASEGFLVLNLAYFGVPDS-GLPENLINLPLEYFGQAA 212
Cdd:COG1073   18 RDGikLAGDLYLPAGASKKYPAVVVAHGNGGVKeqRALYAQRLAELGFNVLAFDYRGYGESeGEPREEGSPERRDARAAV 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379999274 213 AWLRARPEVAGRRVGVTGASKGAEAALLVGATFPQdIGAVAAFAP-SGLVFEGIDRAGtfppgppmsswSFRGQPWPYLP 291
Cdd:COG1073   98 DYLRTLPGVDPERIGLLGISLGGGYALNAAATDPR-VKAVILDSPfTSLEDLAAQRAK-----------EARGAYLPGVP 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379999274 292 YH--TDWAAFFAagpQPMTPVHHRaarqasaaqiaaatipaERVAGPVLLVSGGEDQVwHAAELAEVAQrrrEAAGRPSR 369
Cdd:COG1073  166 YLpnVRLASLLN---DEFDPLAKI-----------------EKISRPLLFIHGEKDEA-VPFYMSEDLY---EAAAEPKE 221

                 ....*....
gi 379999274 370 HLTHPHAGH 378
Cdd:COG1073  222 LLIVPGAGH 230
Axe1 COG3458
Cephalosporin-C deacetylase or related acetyl esterase [Secondary metabolites biosynthesis, ...
210-269 5.72e-04

Cephalosporin-C deacetylase or related acetyl esterase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 442681 [Multi-domain]  Cd Length: 318  Bit Score: 41.72  E-value: 5.72e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 379999274 210 QAAAWLRARPEVAGRRVGVTGASKGAEAALLVGAtFPQDIGAVAAFAPSGLVFEG---IDRAG 269
Cdd:COG3458  162 RAVDALRSLPEVDGKRIGVTGGSQGGGLALAAAA-LDPRVKAAAADVPFLCDFRRaleLGRAG 223
PldB COG2267
Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];
141-380 5.89e-04

Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];


Pssm-ID: 441868 [Multi-domain]  Cd Length: 221  Bit Score: 41.14  E-value: 5.89e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379999274 141 LYGSLFSPAPGTdlRGACLCL--GGSEGGLYSPVAALLASEGFLVLNLAYFGVPDSGLPENLINLPLEYFGQAAAWLRAR 218
Cdd:COG2267   16 LRGRRWRPAGSP--RGTVVLVhgLGEHSGRYAELAEALAAAGYAVLAFDLRGHGRSDGPRGHVDSFDDYVDDLRAALDAL 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379999274 219 PEVAGRRVGVTGASKGAEAALLVGATFPQDIGAVAAFAPSglvfegidragtfppgppmsswsFRGQPWPYLPYHTDWAA 298
Cdd:COG2267   94 RARPGLPVVLLGHSMGGLIALLYAARYPDRVAGLVLLAPA-----------------------YRADPLLGPSARWLRAL 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379999274 299 FFAAGpqpmtpvhhraarqasaaqiaaatipAERVAGPVLLVSGGEDQVWHAAELAEVAqrrrEAAGRPSRHLTHPHAGH 378
Cdd:COG2267  151 RLAEA--------------------------LARIDVPVLVLHGGADRVVPPEAARRLA----ARLSPDVELVLLPGARH 200

                 ..
gi 379999274 379 HL 380
Cdd:COG2267  201 EL 202
PRK10566 PRK10566
esterase; Provisional
205-385 4.52e-03

esterase; Provisional


Pssm-ID: 182555 [Multi-domain]  Cd Length: 249  Bit Score: 38.43  E-value: 4.52e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379999274 205 LEYFGQAAAWLRARPEVAGRRVGVTGASKGAEAALLVGATFPQdIGAVAAFAPSGLvFEGIDRAgTFPPGPPMSswsfrg 284
Cdd:PRK10566  88 MQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPW-VKCVASLMGSGY-FTSLART-LFPPLIPET------ 158
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 379999274 285 qpwpylPYHTDWAAFFAAGPQPMTPVHHraarqasaaqiaaatipAERVAG-PVLLVSGGEDQVWHAAELAEVAQRRREA 363
Cdd:PRK10566 159 ------AAQQAEFNNIVAPLAEWEVTHQ-----------------LEQLADrPLLLWHGLADDVVPAAESLRLQQALRER 215
                        170       180
                 ....*....|....*....|....*
gi 379999274 364 AGrpSRHLT---HPHAGHHLSLPGL 385
Cdd:PRK10566 216 GL--DKNLTclwEPGVRHRITPEAL 238
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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