3JCR


Conserved Protein Domain Family
PRP3

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pfam08572: PRP3 
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pre-mRNA processing factor 3 (PRP3)
Pre-mRNA processing factor 3 (PRP3) is a U4/U6-associated splicing factor. The human PRP3 has been implicated in autosomal retinitis pigmentosa.
Statistics
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PSSM-Id: 462524
Aligned: 116 rows
Threshold Bit Score: 88.0362
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3JCR_K       311 FD----------PRVSiapsQRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQAEIs---------QAARKT--------- 362
XP_003679017  46 LStstl---rsnDKVT----KRLERGLKFHEKGEVSSQIERQREEQRLEYERQKEqeilnkirreKEQAETsak----ia 114
XP_001643871  42 LStnnqspnssyRKVH----ERYRKGLKFFQKGEISAKYELERKVKADEEARQQEederkrikeeEEQEILkvk----va 113
XP_003684635  52 LNfhdakgeanyKKVN----DRLHRGLVFHKKGEITAEYEKQRLL--------NKkkkrkriygeKTQEKLekeklnkik 119
CCD26280      71 LStfntq-pstkTRKG----QRIQ---TFFQPGEVSKRIQHERELQRKVLEQERKfnelerqrrtKEDEVTklk----iq 138
XP_003673750  77 LStlnkh-tgyeNKIH----KRYQRGLSFFQKGEISSKISDERQVQREELERNRQfnerekirleKEDKKRrik----ie 147
EJT44622      71 LSdiqg--pspsNKLN----RRYERGLKFYKKGEISKRIAQERELRKFQEDEDSKrrl----kleEEERERekl----ve 136
CCH61325      47 LQdsss--kfvdYKLQ----RRFDRGLKFFKKGEKLNEIAKKRKIIHDSIEKNKLelqlqnelerKRLNDLrtk----ie 116
Q6FJ58        44 LSdig----qqnGKVF----KKYKDGLRFYKKGEISAQLHKEREELARRLKEEELraaaekahrvSLAEQKrer----ia 111 [Candida] glabrata
CAR24844      48 LSrerf--dtvaSKVS----KRYSRGLKFRTPGVLAKELDEKRAwlake-----------relqkEQDNLRkak----vr 106
3JCR_K       363 -GIHTSTRLAliapkkelkEgDIPEI------EWWDSYIIPNGF---DLTEENPKRE----------------DYF---- 412
XP_003679017 115 rGELPDTKVGedkyirrieD-VPE-V------EWWDKPYL---Dd--QLNVLPKYQGgyee--------esesDEEde-- 171
XP_001643871 114 nGELPDFSTGenkylkdltN-IPT-V------EWWDKPYL---Dd--RLEIFDKYRVpcregdn--tdeeeeeDEDfde- 177
XP_003684635 120 eGLIPNHVIGedkyftaveD-IPD-V------EWWDRPYL---De--NNNILEKYDKqftvddv---seseseVEDdern 183
CCD26280     139 nCELPDLALGedkyipnvdD-IPD-C------EWWDVVYL---DttdKTKILDKYSMqypsvee---dedfvsDEEdee- 203
XP_003673750 148 rGELPDLELGedkyilkasS-VPT-V------EWWDLPFL---Ee-kSLQILDKYSMpypnd------edfisDEGdve- 208
EJT44622     137 sGHLPDLKLHedtyildlpK-FETYYnanhghEWWDTVYL---De--KGEVMEKYRMkgtspaeedgkydnddDDDddd- 209
CCH61325     117 nAELPDQTKNeekylksieT-IPK-V------EWWDEPYLNETSnsdTLTLVDKYRNdysnln-----edddsDEDded- 182
Q6FJ58       112 nAEIPDDSIGeelymqrfkD-IPN-Y------EWWDESYL---Dk--SGNILPKYTTeypedmds-dydsddmNSGvecm 177 [Candida] glabrata
CAR24844     107 aGELPDESIGeqny--litD-VPQ-I------EWWDAIYV---QspeDWTIKTKYSKsygtm------dedsdDEQdse- 166
3JCR_K       413 ---------GITNLVEHPAQLNPPVDNDTpv-----tlG-VYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPPPEPKVR 477
XP_003679017 172 --------vPSIQYVHHPVPIKVH----Npk-----ptTkVYLTKKEQKKIRRNKRKFEREEKETRIKMGLDPKPEPKVK 234
XP_001643871 178 ------nmkPSIRYVLHPIPIKV-D---Evv-----pvSkVYLTKTEIKKARRNRRKIEREELETKIKLGVLPKPAPKVK 242
XP_003684635 184 s---eivshPSIRYVQHPVPIKLGD---Rnr-----lvSkIYLTKTERKKLRRNRKKLEREEKETKIKLGILPKPEPKVK 252
CCD26280     204 ------erhPSIRYIQHPVPIKM-ELSNQgg-----rpNkVYLTKKEQKKIRRNKRKLIRQEIDEKIKLGLEPKPVPKVK 271
XP_003673750 209 ------eihPSIRYIQHPVPIKV-E---Evk-----ikDkIYLTKKEQKKVRRNTRKLIRQEKEEKIKLGLEPKPLPKVK 273
EJT44622     210 ------dkhPSIRYVAHPIPEKI-N---Yak-----vsVkTYLTQRERKKIRRNRRKMFREAQEVKIKLGLLPKPEPKVK 274
CCH61325     183 ------glhPSLRFIQHPVPIAAKA---NstsessvviPkLYLTKLETKKLRRNNRKLIREEKESRIKSGLDPKPDPKVK 253
Q6FJ58       178 ksqteetgpPSIRYVQHPVPIKI-P---Eei-----taPkMYLTKLEHKKARRRNRKLQREEKMAKVQLGLEPKPETKVK 248 [Candida] glabrata
CAR24844     167 ------sesPSVRYVQHPVPVQAAE---Hap-----skPkIYLVKREQKKIRRNRRKLLQEEHEQKIKLGLEPKPAPKVK 232
3JCR_K       478 ISNLMRVL-GTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLT 521
XP_003679017 235 LSNMMSVYeNNQNITDPTQWEHTVIEQVEQRKRKHLETNMIRHEE 279
XP_001643871 243 LANMMSVYeNNQNITDPTSWEKTVRNQVEERKRKHEDMNLQRHEE 287
XP_003684635 253 VSNMMNVYeNNQNITDPTQWENTVREQVEERKRKHEETNKIRHEE 297
CCD26280     272 LSNMMNVYeNNQNITDPTSWEVTVKQQMEERKRKHEEINQKRHEE 316
XP_003673750 274 LSNMMNVFeNNQNITDPTTWETTVKQQVNARMRKHEEENNERHEl 318
EJT44622     275 LSNMMSVYeNDQNIADPTAWEKTVKDQVDLRKRKHMEENERRHEE 319
CCH61325     254 LSNMMAVFeNNQNITDPTAWENTVKTQINDRKQKHLQENEKRHLE 298
Q6FJ58       249 LSNMMNVLdNNKNISDPTAWENMVKDQIEERRQRHIQENEKRHEE 293 [Candida] glabrata
CAR24844     233 LSNMMSVYqNNENITDPTSWEQTVKAQAEERHQKHVETNIRRHYE 277
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