6ZYW,3VKG,6ZYW,7KZN,6ZYY


Conserved Protein Domain Family
Dynein_heavy

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pfam03028: Dynein_heavy 
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Dynein heavy chain region D6 P-loop domain
This family represents the C-terminal region of dynein heavy chain. The chain also contains ATPase activity and microtubule binding ability and acts as a motor for the movement of organelles and vesicles along microtubules. Dynein is also involved in cilia and flagella movement. The dynein subunit consists of at least two heavy chains and a number of intermediate and light chains. The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases. The core of the 380 kDa motor unit contains a concatenated chain of six AAA modules, of which four correspond to the ATP binding sites with P-loop signatures described previously, and two are modules in which the P loop has been lost in evolution. This C-terminal domain carries the D6 region of the dynein motor where the P-loop has been lost in evolution but the general structure of a potential ATP binding site appears to be retained.
Statistics
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PSSM-Id: 460782
Aligned: 355 rows
Threshold Bit Score: 82.1073
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6ZYW_A       3560 SKTVPIFFVLFPGVD-PTPDVERVAA--TFDvsanngRF-INISMGQGQED-RAKKALFDCAQKGHWIMLQNVHLMQSWl 3634 Tetrahymena t...
EST09332      951 DASTPVALCSVPGYD-ASYRVDHLVK--LVG------ARcTPVAMGSQEGFaLADHAITSAARTGNWVLLKNVHLAPSW- 1020
EKM60740     2850 VAATPLSLVSVAGYD-ASYRVENLVK--NVG------ARsASVAMGSQEGFaLADQAIATAARQGSWVLLKNVHLAPSW- 2919
EPS93792     2886 SPATPLSLVSVTGYD-ASYRVENLVR--DAG------SRcASVAMGSQEGFtLADQAIALAARQGSWVLLKNVHLAPSW- 2955
EAU92970     2857 PASTPIALVSVPGYD-ASYRVENLVK--NTG------ARfSSVAMGSQEGFtLADQAIAAASRQGTWVLLKNVHLAPSW- 2926
XP_007325029 2821 LPATPVSLVSVHGYD-ASYRVENLIK--NTN------SRsTSVAMGSQEGFtLADQAIAAASRQGTWVLLKNVHLSPAW- 2890
XP_003038944 2856 PASTPLGLVSVPGYD-ASYRVENLIK--NTG------TRsSSVAMGSQEGFsLADQAIAAASRQGTWVLLKNVHLAPSW- 2925
Q23DR0       3963 NCKSPILMCSAPGFD-PSYKVDALAK--EMG------VRhISVAIGSQEGFdLADKAIQQAAKSGIWVLLKNVHLAPSW- 4032 Tetrahymena t...
A0D7F8       3925 SNKIPILLCSAPGFD-PSFKVEQLSR--EMG------IKlTSVAIGSAEGFdQAEQAITQSVKSGSWVMLKNVHLATSW- 3994 Paramecium te...
EKC41076     4723 TLSLPILLLYSFEAEaAQSRFLDFSGrrQAP------RLmVTITDNSQATRsKVRKTIRKAIAEGSWVYLHNAHNAPNV- 4795
6ZYW_A       3635 ygLNGLEGFlesvfaspkTHP-----NFRVFISSEPPNvllplmQiIPESILQGSLKIA 3688 Tetrahymena thermophila SB210
EST09332     1021 --LSQLEKK---------MHGlnpnrNFRLFLTCETSP------S-IPVNFLRASRILM 1061
EKM60740     2920 --LGQLEKK---------LQTlspnrNFRLFLTMETNP------S-IPVNILRQSRIFM 2960
EPS93792     2956 --LGQLEKK---------LQTlnphrNFRLFLTMEANP------S-IPVNILRQSRILM 2996
EAU92970     2927 --LGQLEKK---------LQTlnphrSFRLFLTMEMNP------S-IPVNILRQSRLIM 2967
XP_007325029 2891 --LGQLEKK---------LQTlnphrNFRLFLTMEANP------S-IPVNILRQSRLIM 2931
XP_003038944 2926 --LGQLEKK---------LQTlnphrNFRLFLTMEANP------S-IPTNILRQSRLIM 2966
Q23DR0       4033 --LSEVEKS---------IHRltphnNFRLFLTMEFNP------K-VPSTLIRQSYKLV 4073 Tetrahymena thermophila SB210
A0D7F8       3995 --LNDLEKK---------LFRltpnaNFRIFLTMEFNP------K-IPTTLIRQSYKLV 4035 Paramecium tetraurelia
EKC41076     4796 --LNSLESF---------LVEkpnpeGFRLWVACQADP------EvIPVRLLQNSIKAV 4837
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