2YUK


Conserved Protein Domain Family
HMG-box_KMT2C

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cd22026: HMG-box_KMT2C 
Click on image for an interactive view with Cn3D
high mobility group (HMG)-box found in histone-lysine N-methyltransferase 2C (KMT2C) and similar proteins
KMT2C, also called myeloid/lymphoid or mixed-lineage leukemia protein 3 (MLL3) or homologous to ALR protein, is a histone H3 lysine 4 (H3K4) lysine methyltransferase that functions as a circadian factor contributing to genome-scale circadian transcription. It is a component of a large complex that acts as a coactivator of multiple transcription factors, including the bile acid (BA)-activated nuclear receptor, farnesoid X receptor (FXR), a critical player in BA homeostasis. The MLL3 complex is essential for p53 transactivation of small heterodimer partner (SHP). KMT2C is also a part of activating signal cointegrator-2 (ASC-2)-containing complex (ASCOM) that contains the transcriptional coactivator nuclear receptor coactivator 6 (NCOA6), KMT2C and its paralog MLL4. The ASCOM complex is critical for nuclear receptor (NR) activation of bile acid transporter genes and is down regulated in cholestasis.
Statistics
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PSSM-Id: 438835
Aligned: 7 rows
Threshold Bit Score: 159.565
Created: 8-Apr-2019
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
putative DNA
Conserved site includes 19 residues -Click on image for an interactive view with Cn3D
Feature 1:putative DNA binding site [nucleic acid binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                        # #####  ##      #         ##  #  ##      #   #  #   #  #        
2YUK_A         10 QRSTLKWEKEEALGEMATVAPVLYTNINFPNLKEEFPDWTTRVKQIAKLWRKASSQERAPYVQKARDNRAALRINKVQMS 89   human
Q8NEZ4       1633 QRSTLKWEKEEALGEMATVAPVLYTNINFPNLKEEFPDWTTRVKQIAKLWRKASSQERAPYVQKARDNRAALRINKVQMS 1712 human
ETE66201     1248 QRSTLKWEKEEALGEMATVAPVLYTNINFPNLKEEFPDWTTRVKQIAKLWRKASSQERAPYVQKARDNRAALRINKVQMS 1327 king cobra
KPP79613     1323 QRSTLKWEKEETLGEMATVAPVLYTNMNFPNLKEEFPDWSTRVKQIAKLWRKASSQERSPYVQKARDNRAALRINKVQMS 1402 Asian bonytongue
OCT73854     1627 QRSTLKWEKEEALGEMATVAPVLYTNVNFPNLKDEFPDWTTRVKQIAKLWRKASSQERAPYVQKARDNRAALRINKVQMS 1706 African clawe...
XP_014347303 1569 QRSTLKWEKEEALDEMATVAPVLYTNINHPNLREDFPDWSTRVKQIAKLWRKASSQERAPYVQKARDNRAALRINKVQMS 1648 coelacanth
XP_007908022  832 QRSTLKWEKEEALGEMATVAPVLYTNTNFPNLKEDFPDWATRVKQIAKLWRKASSQERAPYVQKARDNRAALRINKVQIT 911  elephant shark
Feature 1          
2YUK_A         90 N 90   human
Q8NEZ4       1713 N 1713 human
ETE66201     1328 N 1328 king cobra
KPP79613     1403 N 1403 Asian bonytongue
OCT73854     1707 N 1707 African clawed frog
XP_014347303 1649 S 1649 coelacanth
XP_007908022  912 S 912  elephant shark

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