1XWI


Conserved Protein Domain Family
Vps4_C
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pfam09336: Vps4_C (this model, PSSM-Id:430536 is obsolete and has been replaced by 462762)
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Vps4 C terminal oligomerization domain
This domain is found at the C terminal of ATPase proteins involved in vacuolar sorting. It forms an alpha helix structure and is required for oligomerization.
Links
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Statistics
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PSSM-Id: 430536
Aligned: 125 rows
Threshold Bit Score: 61.3599
Created: 27-Apr-2021
Updated: 29-Sep-2021
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
1XWI_A       259 LTPCSPGDPGAIEMTWMD--VPGDKLLEP-VVSMSDMLRSLSNTKPTVNEHDLLKLKKFTEDFG 319  human
XP_011663836 221 FTPCDESEPDSVEQSMRD--IQ-PELVQPrQITIQDFLKALCTSQGTISQAELHKFTEFTQKFG 281  purple sea urchin
EFC38827     167 IVPCSRNEKNSKKMNMLD--IKQPEKLKIaKVTAKDIYDSIKSVKPSTNPSEILSFIEFTQNYG 228  Naegleria gruberi
EDO31428     221 apPCSEGEPGCVTCLLKD--LP-PQKVTPrPVVLEDFIRSLSHNGSTITDEDLDKFTVFTKSYG 281  starlet sea anemone
EGD83623     362 WRPCDEEEPGALRGNVQD--IPAEDAVAR-SVRSGDVAKAIARNPRTVSSEELARFLAYnqh-- 420  Salpingoeca rosetta
EKC22348     211 FVPCKEDEDADLKASIVE--IP-ADKVRPrEVTLNDFLSALKTHRKTVTQEEIQKFENFTKSMG 271  Pacific oyster
Q240K0       425 YVACAPSDPQGESKVLMD--IQ-GSMLKLqDVSIDHFELALQSCKPSVSEKDIERQIEFTKEFG 485  Tetrahymena thermophila SB210
EAY23276     380 veaCAPNAPGARKWSLRDpdFPADKIESP-PVKFEDFKEAICKIHPTVSPAELVKYQTWTNEFG 442  Trichomonas vaginalis G3
EAY20193     366 fFPCPENTPGCVKMNLHDpnFPIDKVPVP-PITFEDFKDAMHKAKSSVSPKDIQQFEEWTALFG 428  Trichomonas vaginalis G3
ERT00887     914 WVPCEAGSAGARQMTWKN--VPQGKARAP-PLTVDDFFAAVAKVKPSVGANEITRCAEWTAQFG 974  Sporothrix schenckii ATCC 58251
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