Conserved Protein Domain Family
T-box_MGA-like

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cd20195: T-box_MGA-like 
DNA-binding domain of MAX gene-associated protein and related T-box proteins
MGA (also known as MGAP, MAX dimerization protein, MAD5, MXD5) is a dual-specificity transcription factor that regulates the expression of both, MAX-network and T-box family target genes. MGA functions as a repressor or an activator; it binds to 5'-AATTTCACACCTAGGTGTGAAATT-3' core sequence. Its function is activated by heterodimerization with MAX. This subfamily belongs to the T-box family of transcription factors which play a multitude of diverse functions throughout development. The founding member of the T-box family is Brachyury (also known as TBXT, or T). T-box family members share a conserved DNA-binding domain (T-box) which binds DNA in a sequence-specific manner. Common features shared by T-box family members are DNA-binding and transcriptional regulatory activity, a role in development, and conserved expression patterns.
Statistics
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PSSM-Id: 410321
Aligned: 11 rows
Threshold Bit Score: 332.861
Created: 8-Mar-2019
Updated: 25-Oct-2021
Structure
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Aligned Rows:
 
DNA binding
Feature 1:DNA binding site [nucleic acid binding site]
Evidence:
  • Comment:based on related T-box transcription factors bound with DNA
  • Comment:T-box monomers dimerize upon DNA binding; some form weak dimers, others tight dimers, some may bind as non-associating monomers where the dimer is kept in register by the DNA

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                    ##                                #                  
Q8IWI9         75 ITVTLDnNSMWNEFYHRsTEMILTKqGRRMFPYCRYWITGLDSNLKYILVMDISPVDnhRYKWNGRWWEPSGKAEph--v 152  human
BAA84719       88 ITVVLDnNTMWNEFYRRsTEMILTKqGRRMFPYCRYWITGLDPNLKYILVMDIAPVDnqRYKWNGRWWEQSGKAEph--v 165  Japanese fire...
POI24038       75 ITVTLDnNSMWNEFYHRnTEMILTKqGRRMFPYCRYWITGLDASQKYILVMDISPVDnhRYKWNGRWWEPSGKAEph--v 152  Chinese bambo...
XP_006008529   89 IKVTLDnNGMWNEFYHCrTEMILTKqGRRMFPYCRYRIGGLDPFLKYILVMDITPVDnsRYKWNGRRWEASGKAEph--v 166  coelacanth
XP_007887740   78 AVVTLEnQEMWNQFYKRgTEMILTKhGRRMFPNCSFCICGLDPFRKYILVMDIAPVDnnRYKWNGRWWEVNGKAEph--v 155  elephant shark
NP_001164210  100 ITVTLDnNNMWNEFHRCkTEMILTKqGRRMFPYCRFRLSGMEPFQNYVLAMDIKPADncRYKWSGKGWEPNGKAEp---h 176  zebrafish
AWP19786      229 VTVTLEnNKVWRQFHGCgTEMILTKpGRRMFPYCRFRLAGLDPECQYSLVLSIVPSDqyKYRWNRSQWEISGPAEnqalg 308  turbot
RXN11850       51 IDVTLEnESVWSRFHSLgTEMILTAqGRRMFPCCRFRLSGLQPDLSYFLIMDIAPLDdfRHRWNGKTWEPDGAGEph--l 128  rohu
XP_007910678   54 IKVSLKkWSIWDKFYNLgTEMRMSKrGRFMFPYCEYSVSGLDPDRNYIMAMDISPVDtfRYRYNGCKWQINGKATah--v 131  elephant shark
XP_028809393   66 VTVALDnSALWKKFCGCrTEMLLTRpGRLMFPYCSYRLEGLDPDRMYLLAIDFRPADnhRYRWTKGGWQVSGKGDph--m 143  denticle herring
XP_028294150   38 VRVSLEnHRMWREFCRCrTEMVASNqGSRMFPYCRFSIAGLQPSRNYCLQLVLRLNHrnQFIWTGSNWEASGPAHtqakv 117  blunt-snouted...
Feature 1                                    #  #            ##                                   
Q8IWI9        153 LGRVFIHpESPSTGHyWMHQPVSFYKlKLTNNtlDQEGHIILhSMHRYLPRLHLVPaekavev----iqlngpgVHTFTF 228  human
BAA84719      166 LGRVFIHpESPSTGQyWMHQPVSFYKlKLTNNylDQEGHIILhSMHRYLPRLHLVPadratev----iqingpdVHTFTF 241  Japanese fire...
POI24038      153 LGRVFIHpESPSTGQyWMHQPVSFYKlKLTNNtlDQEGHIILhSMHRYLPRLHLVPadkatev----iqlngpdVHTFTF 228  Chinese bambo...
XP_006008529  167 LGRVFIHpESPSTGHyWMQQPISFYKlKLTNNtlDQEGHIILhSMHRYLPRLHIVPadkatev----iqlngpdVLTFTF 242  coelacanth
XP_007887740  156 LGRVYIHpDSPSTGSyWMRQPISFCKlKLTNNtlDQEGHIILhSMHRYLPRLHVIPadkltdi----iplngpnVLTFTF 231  elephant shark
NP_001164210  177 ISRLFVHpESPASGLhWMQYPVSFYRlKLCNTl-DQEGHIILhSMHRYLPQIHIIPadkvskdi---lildrpnVVTLSF 252  zebrafish
AWP19786      309 LIRAFAHhFSTCKGSdWMGSLVSFYKlKLTNNsqDQDNHIILhSMHRYIPRLHVIPvpedvvttpdqpvvmgpeSMTFTF 388  turbot
RXN11850      129 QSPVCFHpDSPAPGQrWMDGPVSFYKvKLSHGslERDDAVVLhPMHRYQPRLYVVPvsacpdrt---vpldgpdVHMFTF 205  rohu
XP_007910678  132 IGRLYFHpNGSVCGReWMAKPMSFAKlRLTNCpsAEEGHAILhSMHRYVPQLHIIVadgivdq----qdlndrrVYAFIF 207  elephant shark
XP_028809393  144 FGRAVVHpESPATGGhWMGGPVTFSKlKLTNNlqDREGHVVLrSMHCYLPHLYVVPvvgedai-----rldgpgVDVFTF 218  denticle herring
XP_028294150  118 SGRPFTHpDSPAPGRhWMDSPVSFYRlKLTNGatQQEGAVPLtPNHRYLPTLLVLPadre-----------tdkTLSFSF 186  blunt-snouted...
Feature 1                 ####    #  ##  #######  
Q8IWI9        229 PQTEFFAVTAYQNIQITQLKIDYNPFAKGFRD 260  human
BAA84719      242 PQTEFFAVTAYQNIQITQLKIDYNPFAKGFRE 273  Japanese firebelly newt
POI24038      229 PQTEFFAVTAYQNIQITQLKIDYNPFAKGFRD 260  Chinese bamboo-partridge
XP_006008529  243 PQTEFFAVTAYQNLQITQLKIDYNPFAKGFRE 274  coelacanth
XP_007887740  232 SQTQFVAVTAYQNIKITQLKIDYNPFAKGFRD 263  elephant shark
NP_001164210  253 AQTEFFAVTAYQNLCITQLKIDYNPFAKGFRE 284  zebrafish
AWP19786      389 PQTEFMAVTTYQNFRITQLKINYNPFAKGFRE 420  turbot
RXN11850      206 PKTEFYAVTSYQNPMITRLKIDCNPFMLAFRE 237  rohu
XP_007910678  208 QQTEFFAVTKYENKFIRQLKHFYNPYGTALRD 239  elephant shark
XP_028809393  219 PQTEFFAVTSYQNHKITMLKLCNNPNAKCFRE 250  denticle herring
XP_028294150  187 PQTEFMAVLSYQNKALSQLKVHYNPFSKGPAP 218  blunt-snouted clingfish

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