Conserved Protein Domain Family
CYCLIN_CCNL1_rpt2
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cd20592: CYCLIN_CCNL1_rpt2 
second cyclin box found in cyclin-L1 (CCNL1) and similar proteins
CCNL1 is an L-type cyclin involved in the regulation of RNA polymerase II (pol II) transcription. It functions in association with cyclin-dependent kinases (CDKs). CCNL1 contains two cyclin boxes. This model corresponds to the second one. The cyclin box is a protein binding domain.
Links
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Statistics
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PSSM-Id: 410295
Aligned: 6 rows
Threshold Bit Score: 258.774
Created: 12-Apr-2019
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q9UK58       199 KHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFqPETIACACIYLAARALQIpLPTRPHWFLLFGtTEEEI 278 human
KFP49232      37 KHPHKIIVMYLQVLECERNQTLVQTAWNYMNDSLRTNVFVRFqPETIACACIYLAARALQIpLPTRPHWFLLFGtTEEEI 116 turkey vulture
XP_005987362 179 KHPHKIIVMYLQVLECERNETLVQTAWNYMNDSLRTNVFVRFqPETIACACIYLAARALQIpLPNRPHWFLLFGaTEKEI 258 coelacanth
Q6GN15       179 KHPHKIIVMYLQVLECERNQTLVQTAWNYMNDCLRTNVFVRFdAETIACACIYLAARALQLsLPNRPHWFLLFGaTEENI 258 African clawed ...
XP_007886943 130 KHPHKIIFMYLQVLECERNPTLVQTAWNYMNDCLRTNVFVRFnPETIACACIYLAARALQIlLPNRPHWFLLFGvTEEEI 209 elephant shark
Q7ZVX0       178 KHPHKIIVMYLQVLECEKNQMLVQTAWNYMNDALRTSAFVRFePETIACACIYLAARVLQIpLPSKPHWFLLFGaTKEDI 257 zebrafish

Q9UK58       279 QEICIETLRLYTRKKPNyelLEKEVEKRKVALQEAKLKAKGLN 321 human
KFP49232     117 QEICLTTLKLYTRKKPNyefLDKEVEKRKMALQEAKLKAKGLN 159 turkey vulture
XP_005987362 259 QDICVTTLKLYTRKKPNyelLDKEVEKRKVALQEAKLKAKGLN 301 coelacanth
Q6GN15       259 QDICITTLRLYSRIKPNyefLEKEVDKRKVALQEAKLKAKGLN 301 African clawed frog
XP_007886943 210 QDICTTTLKLYTRKKPNyeyLEKEVEKRKVSLQEAKLKAKGLN 252 elephant shark
Q7ZVX0       258 KEICINTMKLYSREKPHseqLERQVEKRKIFLEEARLKARGQN 300 zebrafish
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