3KY9


Conserved Protein Domain Family
CH_VAV1

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cd21262: CH_VAV1 
calponin homology (CH) domain found in VAV1 protein
VAV1 is expressed predominantly in the hematopoietic system and it plays an important role in the development and activation of B and T cells. It is activated by tyrosine phosphorylation to function as a guanine nucleotide exchange factor (GEF) for Rho GTPases following cell surface receptor activation, triggering various effects such as cytoskeletal reorganization, transcription regulation, cell cycle progression, and calcium mobilization. It also serves as a scaffold protein and has been shown to interact with Ku70, Socs1, Janus kinase 2, SIAH2, S100B, Abl gene, ZAP-70, SLP76, and Syk, among others. VAV proteins contain several domains that enable their function: N-terminal calponin homology (CH), acidic, RhoGEF (also called Dbl-homologous or DH), Pleckstrin Homology (PH), C1 (zinc finger), SH2, and two SH3 domains. This model corresponds to the CH domain, an actin-binding domain which is present as a single copy in VAV1 protein.
Statistics
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PSSM-Id: 409111
Aligned: 6 rows
Threshold Bit Score: 225.977
Created: 7-Oct-2019
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
putative actin
Conserved site includes 25 residues -Click on image for an interactive view with Cn3D
Feature 1:putative actin binding site [polypeptide binding site]
Evidence:
  • Comment:Based on the structure evidence that Homo sapiens filamin-A binds F-actin.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         #   #                                                              # ##  ## #  
3KY9_A         5 ELWRQCTHWLIQCRVLPPSHRVTWegaQVCELAQALRDGVLLCQLLNNLLPHAINLrEVNLRPQMSQFLCLKNIRTFLST 84  human
NP_001086991   2 ELWRHCARWLIQCRVLPPNHRVTLdtaQVCDLAQALRDGVLLCQLLNNLMANAVNLgEINLRPQMSQFLCLKNIRTFLST 81  African clawed ...
P15498         2 ELWRQCTHWLIQCRVLPPSHRVTWdgaQVCELAQALRDGVLLCQLLNNLLPHAINLrEVNLRPQMSQFLCLKNIRTFLST 81  human
EMP26099       2 ELWKQCANWLIQCRVLPPNHRVTWpssQVCELAQALRDGVLLCQLLNNLMPHAVNLrEINLRPQMSQFLCLKNIRTFLST 81  Green sea turtle
XP_006003732   2 EMWRQCAHWLIQCRVLPPNHRVTWestQVCDLAQALRDGVLLCQLLNNLQPHSVNLkEINLRPQMSQFLCLKNIRTFLTA 81  coelacanth
KTG32050       2 ELWRQCAGWLIQCRVLPENHRVTWdsaQVCDLAHALRDGVLLCQLLNNLLPQSVNLrQINLRPQMSQFLCLKNIRTFLCA 81  common carp
Feature 1                #########     # ## ##  ##  #    
3KY9_A        85 CCEKFGLKRSELFEAFDLFDvQDFGKVIYTLSALSWTPIA 124 human
NP_001086991  82 CSEKFKMRKADLFEAFDLFDvRDFGKVIDTLSILSWTSVA 121 African clawed frog
P15498        82 CCEKFGLKRSELFEAFDLFDvQDFGKVIYTLSALSWTPIA 121 human
EMP26099      82 CCDKFGLRKNELFEVFDLFDvRDFGKVIETLSILSWTQIA 121 Green sea turtle
XP_006003732  82 CCDKFGLRKSDLFEAFDLFDgRHFGKVIDTLSALSWTPIA 121 coelacanth
KTG32050      82 CQEKFGMRKNELFEAFELFDvRDFAKVIDTLSILSQTPVA 121 common carp

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