Conserved Protein Domain Family
GM130_C

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pfam19046: GM130_C (this model, PSSM-Id:408816 is obsolete and has been replaced by 465957)
GM130 C-terminal binding motif
This entry represents the C-terminal motif from the GM130 protein that is bound by the GRASP65 PDZ domain pfam04495.
Statistics
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PSSM-Id: 408816
Aligned: 41 rows
Threshold Bit Score: 61.2398
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_005470405 1024 VPKEDATAQQIMQLLQEIQN-------PqgaQRSPPfLGENPCIPFFYRPDEQDEVK 1073 Nile tilapia
XP_017722074  110 SPHNNPTAQPIV------QE-------HqenQEHPG-FGSKRPVPFFCWAWLPRRRR 152  black snub-nosed monkey
XP_011890417  500 SPQDN-------------HSaqpxvqeH---QEHPG-LGSNRSVPFFCWAWLQRRRR 539  sooty mangabey
XP_008015619  649 geakegsphdnhsaqpitQE-------H---QEHPG-LGSNRSVPFFCWAWLQRRRR 694  green monkey
XP_024088694  587 PLYDNPTTQPIV------QD-------H---QEHPG-LGSNCCVPFFCWAWLLRRRR 626  Sumatran orangutan
XP_024204850  593 PLLDKPTAQPIVQ------D-------H---QEHPG-LGSNCCVPFFRWAWLPRRRR 632  chimpanzee
XP_024088343  377 SSQDNPTAQPIVQLLGEMQD-------H---QEHPG-LGSNPCVPCFCWAWLPRRRR 422  Sumatran orangutan
XP_024088132  672 SPHDNPTAQQIVQLPPIMQD-------T---QEHPA-LPSKPCVPFFYRAAEnREIN 717  Sumatran orangutan
XP_011855800  155 SPRDSPTALKIVQLLPVTQD-------T---QEHPG-LATKPCVPFFYRAAKNREIN 200  drill
XP_024653610  693 SPHDNPTAEQIVHLLPVMQD-------T---QEHPG-LATKPCMPFFYRASENREIN 738  pig-tailed macaque
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